Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21473.t1 | XP_003611469.1 | 89.5 | 476 | 48 | 1 | 1 | 476 | 1 | 474 | 1.30E-232 | 815.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21473.t1 | Q9LQK7 | 58.2 | 467 | 185 | 5 | 13 | 471 | 11 | 475 | 6.6e-148 | 525.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21473.t1 | G7JZX3 | 89.5 | 476 | 48 | 1 | 1 | 476 | 1 | 474 | 9.6e-233 | 815.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21473 | 0.81702 | 4.09E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene21473 | 0.861932 | 7.25E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene21473 | 0.822554 | 2.23E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene21473 | 0.838229 | 3.26E-57 | -1.69E-46 |
| MS.gene049356 | MS.gene21473 | 0.848217 | 7.06E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene21473 | 0.846923 | 1.60E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene21473 | 0.843778 | 1.14E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene21473 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene21473 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene21473 | 0.834053 | 3.74E-56 | -1.69E-46 |
| MS.gene049907 | MS.gene21473 | 0.823367 | 1.44E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene21473 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene21473 | 0.829609 | 4.68E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene21473 | 0.813487 | 2.50E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene21473 | 0.839156 | 1.88E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene21473 | 0.839902 | 1.20E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene21473 | 0.857788 | 1.29E-62 | -1.69E-46 |
| MS.gene050670 | MS.gene21473 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene21473 | 0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene050686 | MS.gene21473 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene21473 | 0.809709 | 1.66E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene21473 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene21473 | 0.829926 | 3.92E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene21473 | 0.845614 | 3.64E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene21473 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene21473 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene21473 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene05101 | MS.gene21473 | 0.823429 | 1.39E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene21473 | 0.848826 | 4.79E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene21473 | 0.826697 | 2.35E-54 | -1.69E-46 |
| MS.gene051255 | MS.gene21473 | 0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene21473 | 0.830179 | 3.40E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene21473 | 0.885751 | 6.20E-72 | -1.69E-46 |
| MS.gene051666 | MS.gene21473 | 0.845407 | 4.14E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene21473 | 0.833071 | 6.58E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene21473 | 0.819522 | 1.11E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene21473 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene051858 | MS.gene21473 | 0.845808 | 3.22E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene21473 | 0.815608 | 8.47E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene21473 | 0.817605 | 3.02E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene21473 | 0.857305 | 1.79E-62 | -1.69E-46 |
| MS.gene052271 | MS.gene21473 | 0.833989 | 3.88E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene21473 | 0.83778 | 4.25E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene21473 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene21473 | 0.808841 | 2.54E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene21473 | 0.838921 | 2.16E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene21473 | 0.832666 | 8.30E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene21473 | 0.802209 | 6.25E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene21473 | 0.830618 | 2.65E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene21473 | 0.845937 | 2.97E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene21473 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene21473 | 0.803938 | 2.75E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene21473 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene21473 | 0.813134 | 2.98E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene21473 | 0.819121 | 1.37E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene21473 | 0.810413 | 1.17E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene21473 | 0.857077 | 2.09E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene21473 | 0.819438 | 1.16E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene21473 | 0.82094 | 5.26E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene21473 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene21473 | 0.839818 | 1.26E-57 | -1.69E-46 |
| MS.gene053384 | MS.gene21473 | 0.835592 | 1.53E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene21473 | 0.828637 | 8.05E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene21473 | 0.826163 | 3.15E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene21473 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene21473 | 0.836277 | 1.03E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene21473 | 0.811293 | 7.53E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene21473 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene21473 | 0.840948 | 6.39E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene21473 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene21473 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene21473 | 0.810639 | 1.04E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene21473 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene21473 | 0.844512 | 7.22E-59 | -1.69E-46 |
| MS.gene054803 | MS.gene21473 | 0.843468 | 1.38E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene21473 | 0.846466 | 2.13E-59 | -1.69E-46 |
| MS.gene054955 | MS.gene21473 | 0.826434 | 2.72E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene21473 | 0.840931 | 6.46E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene21473 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene21473 | 0.846509 | 2.08E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene21473 | 0.810389 | 1.18E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene21473 | 0.839568 | 1.47E-57 | -1.69E-46 |
| MS.gene055412 | MS.gene21473 | 0.828301 | 9.70E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene21473 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene21473 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene21473 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene055577 | MS.gene21473 | 0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene21473 | 0.842077 | 3.22E-58 | -1.69E-46 |
| MS.gene055638 | MS.gene21473 | 0.824865 | 6.40E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene21473 | 0.865819 | 4.48E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene21473 | 0.848866 | 4.66E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene21473 | 0.853926 | 1.73E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene21473 | 0.852373 | 4.82E-61 | -1.69E-46 |
| MS.gene05602 | MS.gene21473 | 0.830732 | 2.49E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene21473 | 0.801497 | 8.76E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene21473 | 0.860731 | 1.68E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene21473 | 0.84698 | 1.54E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene21473 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene21473 | 0.81459 | 1.43E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene21473 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene21473 | 0.847071 | 1.46E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene21473 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene21473 | 0.844543 | 7.09E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene21473 | 0.813807 | 2.12E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene21473 | 0.821686 | 3.54E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene21473 | 0.843706 | 1.19E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene21473 | 0.830452 | 2.91E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene21473 | 0.812953 | 3.27E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene21473 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene21473 | 0.840155 | 1.03E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene21473 | 0.87104 | 9.25E-67 | -1.69E-46 |
| MS.gene057285 | MS.gene21473 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene21473 | 0.842933 | 1.91E-58 | -1.69E-46 |
| MS.gene05735 | MS.gene21473 | 0.823715 | 1.19E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene21473 | 0.856549 | 2.98E-62 | -1.69E-46 |
| MS.gene057448 | MS.gene21473 | 0.809732 | 1.64E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene21473 | 0.815764 | 7.82E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene21473 | 0.819797 | 9.62E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene21473 | 0.810815 | 9.56E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene21473 | 0.829546 | 4.84E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene21473 | 0.840365 | 9.09E-58 | -1.69E-46 |
| MS.gene057926 | MS.gene21473 | 0.840511 | 8.32E-58 | -1.69E-46 |
| MS.gene057927 | MS.gene21473 | 0.813467 | 2.52E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene21473 | 0.864093 | 1.56E-64 | -1.69E-46 |
| MS.gene058082 | MS.gene21473 | 0.823509 | 1.33E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene21473 | 0.803085 | 4.13E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene21473 | 0.808437 | 3.10E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene21473 | 0.860568 | 1.89E-63 | -1.69E-46 |
| MS.gene058323 | MS.gene21473 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene21473 | 0.819811 | 9.54E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene21473 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene21473 | 0.870862 | 1.06E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene21473 | 0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene058903 | MS.gene21473 | 0.809098 | 2.24E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene21473 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene21473 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene21473 | 0.870756 | 1.15E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene21473 | 0.822259 | 2.61E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene21473 | 0.840144 | 1.04E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene21473 | 0.843874 | 1.07E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene21473 | 0.831567 | 1.55E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene21473 | 0.814798 | 1.28E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene21473 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene21473 | 0.845951 | 2.95E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene21473 | 0.836063 | 1.17E-56 | -1.69E-46 |
| MS.gene05959 | MS.gene21473 | 0.850311 | 1.84E-60 | -1.69E-46 |
| MS.gene059674 | MS.gene21473 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene21473 | 0.943345 | 1.42E-102 | -1.69E-46 |
| MS.gene059688 | MS.gene21473 | 0.845879 | 3.08E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene21473 | 0.842549 | 2.42E-58 | -1.69E-46 |
| MS.gene059695 | MS.gene21473 | 0.844365 | 7.91E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene21473 | 0.862773 | 4.00E-64 | -1.69E-46 |
| MS.gene059718 | MS.gene21473 | 0.823827 | 1.12E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene21473 | 0.867833 | 1.02E-65 | -1.69E-46 |
| MS.gene059902 | MS.gene21473 | 0.838128 | 3.46E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene21473 | 0.887821 | 1.02E-72 | -1.69E-46 |
| MS.gene060193 | MS.gene21473 | 0.869309 | 3.41E-66 | -1.69E-46 |
| MS.gene060403 | MS.gene21473 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene21473 | 0.851404 | 9.07E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene21473 | 0.866273 | 3.22E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene21473 | 0.835895 | 1.29E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene21473 | 0.863186 | 2.98E-64 | -1.69E-46 |
| MS.gene06090 | MS.gene21473 | 0.81366 | 2.29E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene21473 | 0.820994 | 5.11E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene21473 | 0.840266 | 9.65E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene21473 | -0.851513 | 8.45E-61 | -1.69E-46 |
| MS.gene061134 | MS.gene21473 | 0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene21473 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene21473 | 0.803869 | 2.84E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene21473 | 0.892887 | 1.05E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21473.t1 | MTR_5g014290 | 94.958 | 476 | 22 | 1 | 1 | 476 | 1 | 474 | 0.0 | 884 |
| MS.gene21473.t1 | MTR_8g019500 | 25.559 | 313 | 201 | 9 | 173 | 471 | 243 | 537 | 2.74e-18 | 87.8 |
| MS.gene21473.t1 | MTR_7g038720 | 25.240 | 313 | 202 | 9 | 173 | 471 | 244 | 538 | 5.58e-18 | 87.0 |
| MS.gene21473.t1 | MTR_7g030030 | 25.240 | 313 | 202 | 9 | 173 | 471 | 244 | 538 | 5.58e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21473.t1 | AT1G32500 | 58.635 | 469 | 180 | 6 | 13 | 471 | 11 | 475 | 0.0 | 543 |
| MS.gene21473.t1 | AT4G04770 | 26.263 | 297 | 194 | 7 | 173 | 456 | 254 | 538 | 4.57e-19 | 90.5 |
Find 124 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGGGGCGGGGAGGATT+TGG | 0.223915 | 5.3:+7464021 | None:intergenic |
| AAGTCAGATTAAAAGTTTAT+TGG | 0.227386 | 5.3:-7461328 | MS.gene21473:CDS |
| TGGACGGTGGAGATTTATTT+TGG | 0.233451 | 5.3:-7463818 | MS.gene21473:CDS |
| TGGTGGTGGTGGTTGGGATT+GGG | 0.235303 | 5.3:+7464006 | None:intergenic |
| GTGGTGGTGGTGGTTGGGAT+TGG | 0.236284 | 5.3:+7464005 | None:intergenic |
| GGTGGTGGTGGTTGGGATTG+GGG | 0.279949 | 5.3:+7464007 | None:intergenic |
| GGTTGAAACTCCGGTTCATT+TGG | 0.289943 | 5.3:-7463736 | MS.gene21473:CDS |
| TGCTGTTGCTAAGAGGGTTT+TGG | 0.302162 | 5.3:-7463856 | MS.gene21473:CDS |
| GATTGGGGCGGGGAGGATTT+GGG | 0.303645 | 5.3:+7464022 | None:intergenic |
| ACAGAAGTTGGCTTTGTTCC+AGG | 0.315039 | 5.3:+7461463 | None:intergenic |
| TCAGCAATGATTTGGAGATT+TGG | 0.333268 | 5.3:+7461522 | None:intergenic |
| GGAATGATAATGAGTGTTAT+TGG | 0.334871 | 5.3:-7463596 | MS.gene21473:CDS |
| GTGGTGGTTGGGATTGGGGC+GGG | 0.338823 | 5.3:+7464011 | None:intergenic |
| CTATCTCTAATGGAAGAATT+AGG | 0.339561 | 5.3:+7461357 | None:intergenic |
| GTTGAATGTGACTCTGGTTT+TGG | 0.342738 | 5.3:+7464232 | None:intergenic |
| ATGGAAACGTCAAGGTTAAC+AGG | 0.343358 | 5.3:-7462313 | MS.gene21473:intron |
| GAACTGATCGGTTGCGGTGG+TGG | 0.347502 | 5.3:+7463983 | None:intergenic |
| AGAAGAAGATGATGGGATTA+TGG | 0.348829 | 5.3:+7464286 | None:intergenic |
| TTATGTACCGGAGGGTGTTC+AGG | 0.356045 | 5.3:-7463757 | MS.gene21473:CDS |
| TGACGTCATCAGCAATGATT+TGG | 0.358930 | 5.3:+7461514 | None:intergenic |
| TATATCGAATCCGAGGGTTT+TGG | 0.370433 | 5.3:-7463667 | MS.gene21473:CDS |
| GTAAGCACAGGAGGCAAACT+TGG | 0.373309 | 5.3:-7462521 | MS.gene21473:CDS |
| TTATTGGAGTAATGCTGTTT+TGG | 0.374251 | 5.3:-7463580 | MS.gene21473:CDS |
| ACTTCGTACTCTATCTCTAA+TGG | 0.380409 | 5.3:+7461347 | None:intergenic |
| TGGTGGTTGGGATTGGGGCG+GGG | 0.391272 | 5.3:+7464012 | None:intergenic |
| TTGGAGGTTGTGATTGGGGA+AGG | 0.394788 | 5.3:-7463561 | MS.gene21473:CDS |
| CTGATCGGTTGCGGTGGTGG+TGG | 0.395931 | 5.3:+7463986 | None:intergenic |
| GTTGAAACTCCGGTTCATTT+GGG | 0.396052 | 5.3:-7463735 | MS.gene21473:CDS |
| TTGATTCAGAAACAGCTAGA+AGG | 0.399795 | 5.3:-7461422 | MS.gene21473:CDS |
| TCTTCACAGTAGTCTTGTAT+TGG | 0.400205 | 5.3:-7462408 | MS.gene21473:CDS |
| GATATAGTTGAGGAGTTTGA+AGG | 0.406381 | 5.3:-7463618 | MS.gene21473:CDS |
| ATCGGTTGCGGTGGTGGTGG+TGG | 0.410664 | 5.3:+7463989 | None:intergenic |
| TTTGGAATTGGTATCTGGAT+TGG | 0.420346 | 5.3:-7463838 | MS.gene21473:CDS |
| TGTAGGGACGGAGTCTTCTA+AGG | 0.425260 | 5.3:+7464160 | None:intergenic |
| CAAATGGACTTCTGTTCGTC+AGG | 0.432884 | 5.3:-7463484 | MS.gene21473:intron |
| ACATAAACCACCGTCAAATC+CGG | 0.439129 | 5.3:+7463774 | None:intergenic |
| GGTTGCGGTGGTGGTGGTGG+TGG | 0.441081 | 5.3:+7463992 | None:intergenic |
| TGGTTGGGATTGGGGCGGGG+AGG | 0.441570 | 5.3:+7464015 | None:intergenic |
| TTGGTGGTGGTGGAGAATGA+TGG | 0.443179 | 5.3:-7463648 | MS.gene21473:CDS |
| CTAAGACTGTGGAGAGGTTG+TGG | 0.451134 | 5.3:+7464137 | None:intergenic |
| TCAGCGAGGTCGAGAATGAA+TGG | 0.453976 | 5.3:+7464185 | None:intergenic |
| GGTGGTGGTTGGGATTGGGG+CGG | 0.456675 | 5.3:+7464010 | None:intergenic |
| GTCAACGATGCTGACGTGGC+AGG | 0.458522 | 5.3:+7463959 | None:intergenic |
| GATTTGGGAAGAACGGAGGA+AGG | 0.459345 | 5.3:+7464037 | None:intergenic |
| GATAACTCTGTCACTGTGTC+CGG | 0.460261 | 5.3:+7462467 | None:intergenic |
| TGCTTGCCGCGCATATCAAA+TGG | 0.468727 | 5.3:-7463500 | MS.gene21473:CDS |
| GTGCATTGTGGCTCATTCAC+AGG | 0.474620 | 5.3:-7462351 | MS.gene21473:CDS |
| TATGCTCAGCAGACAGATGC+TGG | 0.480588 | 5.3:-7461597 | MS.gene21473:CDS |
| GAGGTTGTGATTGGGGAAGG+TGG | 0.480973 | 5.3:-7463558 | MS.gene21473:CDS |
| CTGAATCAATGCCACGTGCT+TGG | 0.483064 | 5.3:+7461436 | None:intergenic |
| GATGATGAAGAAGAAGATGA+TGG | 0.495014 | 5.3:+7464278 | None:intergenic |
| TGTGATTGGGGAAGGTGGCA+AGG | 0.496641 | 5.3:-7463553 | MS.gene21473:CDS |
| TTGCACGAGGTTCAAGAAGA+AGG | 0.497992 | 5.3:+7461559 | None:intergenic |
| TCAACGATGCTGACGTGGCA+GGG | 0.498735 | 5.3:+7463960 | None:intergenic |
| TGAACGGTGCTGTTGCTAAG+AGG | 0.498829 | 5.3:-7463863 | MS.gene21473:CDS |
| GCAGGGGAACTGATCGGTTG+CGG | 0.501772 | 5.3:+7463977 | None:intergenic |
| ACAATCAACGTCGAAAATCT+CGG | 0.501795 | 5.3:-7463925 | MS.gene21473:CDS |
| AATCTCTTCTCTCTTCTCCA+TGG | 0.503098 | 5.3:-7464100 | MS.gene21473:CDS |
| AATGGGTGCACCGGATTTGA+CGG | 0.505675 | 5.3:-7463784 | MS.gene21473:CDS |
| GGTCACTTATTGCAGCTCCA+TGG | 0.511189 | 5.3:+7461484 | None:intergenic |
| TCATATCAAACAACTAGGTC+CGG | 0.512491 | 5.3:-7462486 | MS.gene21473:CDS |
| GATACATAACCCAAATGAAC+CGG | 0.513043 | 5.3:+7463726 | None:intergenic |
| GTCACTTATTGCAGCTCCAT+GGG | 0.518219 | 5.3:+7461485 | None:intergenic |
| TGCGTTGTTGAATGTGACTC+TGG | 0.519290 | 5.3:+7464226 | None:intergenic |
| TGTATCGTTGCAGAGTAGTA+AGG | 0.522175 | 5.3:-7463709 | MS.gene21473:CDS |
| GAACGGTGCTGTTGCTAAGA+GGG | 0.523036 | 5.3:-7463862 | MS.gene21473:CDS |
| TGCCACGTCAGCATCGTTGA+CGG | 0.523705 | 5.3:-7463957 | MS.gene21473:CDS |
| GTGCTTGGAAATACAGAAGT+TGG | 0.533653 | 5.3:+7461451 | None:intergenic |
| GAGAAGTCGTTGAAGCGAAA+AGG | 0.537869 | 5.3:+7464059 | None:intergenic |
| TTTGACGGTGGTTTATGTAC+CGG | 0.541831 | 5.3:-7463769 | MS.gene21473:CDS |
| CTGTGGAGAGGTTGTGGTGT+AGG | 0.543065 | 5.3:+7464143 | None:intergenic |
| TCAACTTTGCACTTGTCTGT+TGG | 0.543785 | 5.3:-7462446 | MS.gene21473:CDS |
| AATTGTGATCATTTACGAGA+TGG | 0.545673 | 5.3:+7461303 | None:intergenic |
| GTCTTGTATTGGATCATCCA+AGG | 0.548517 | 5.3:-7462397 | MS.gene21473:CDS |
| TGATTCAGAAACAGCTAGAA+GGG | 0.550672 | 5.3:-7461421 | MS.gene21473:CDS |
| GGTAATTTGTCAAATTTGAA+CGG | 0.553286 | 5.3:-7463879 | MS.gene21473:CDS |
| CGGGGAGGATTTGGGAAGAA+CGG | 0.553484 | 5.3:+7464030 | None:intergenic |
| GGGGAACTGATCGGTTGCGG+TGG | 0.556807 | 5.3:+7463980 | None:intergenic |
| GAGAGGTTGTGGTGTAGGGA+CGG | 0.557143 | 5.3:+7464148 | None:intergenic |
| GTTTCAACCTGAACACCCTC+CGG | 0.557730 | 5.3:+7463750 | None:intergenic |
| ATCTATCACTTCCCCTCCAA+AGG | 0.558266 | 5.3:+7461386 | None:intergenic |
| TCTTGTATTGGATCATCCAA+GGG | 0.561446 | 5.3:-7462396 | MS.gene21473:CDS |
| TGTGGAGAGGTTGTGGTGTA+GGG | 0.564194 | 5.3:+7464144 | None:intergenic |
| GCACAGGAGGCAAACTTGGA+AGG | 0.565571 | 5.3:-7462517 | MS.gene21473:CDS |
| CAACGATGCTGACGTGGCAG+GGG | 0.566271 | 5.3:+7463961 | None:intergenic |
| ATCTGACGGGAATAACCCCT+TGG | 0.566453 | 5.3:+7462380 | None:intergenic |
| TGCATTGTGGCTCATTCACA+GGG | 0.566881 | 5.3:-7462350 | MS.gene21473:CDS |
| CAATGCACTTATGAATCTGA+CGG | 0.571017 | 5.3:+7462366 | None:intergenic |
| ATATAGTTGAGGAGTTTGAA+GGG | 0.571311 | 5.3:-7463617 | MS.gene21473:CDS |
| GGGTGTTCAGGTTGAAACTC+CGG | 0.571357 | 5.3:-7463745 | MS.gene21473:CDS |
| AAGAAGCTTCTCTAAGACTG+TGG | 0.574255 | 5.3:+7464126 | None:intergenic |
| ATGATGAAGAAGAAGATGAT+GGG | 0.577329 | 5.3:+7464279 | None:intergenic |
| GGTGGTGGAGAATGATGGTG+AGG | 0.577925 | 5.3:-7463643 | MS.gene21473:CDS |
| GAGCTTACAGAAGTAAGCAC+AGG | 0.578828 | 5.3:-7462533 | MS.gene21473:CDS |
| TCCACCACCACCAAAACCCT+CGG | 0.581717 | 5.3:+7463657 | None:intergenic |
| CAGCGAGGTCGAGAATGAAT+GGG | 0.582930 | 5.3:+7464186 | None:intergenic |
| GTCCGTCAACGATGCTGACG+TGG | 0.585668 | 5.3:+7463955 | None:intergenic |
| AATGCACTTATGAATCTGAC+GGG | 0.586814 | 5.3:+7462367 | None:intergenic |
| GAATTGGTATCTGGATTGGA+CGG | 0.597060 | 5.3:-7463834 | MS.gene21473:CDS |
| TGGAGCTGCAATAAGTGACC+TGG | 0.598264 | 5.3:-7461481 | MS.gene21473:CDS |
| GACGGTGGTTTATGTACCGG+AGG | 0.598657 | 5.3:-7463766 | MS.gene21473:CDS |
| GATTAATGGAATGGGTGCAC+CGG | 0.603821 | 5.3:-7463793 | MS.gene21473:CDS |
| AGATGTATATATCGAATCCG+AGG | 0.610367 | 5.3:-7463674 | MS.gene21473:CDS |
| CTTACAGAAGTAAGCACAGG+AGG | 0.618684 | 5.3:-7462530 | MS.gene21473:CDS |
| AATCTTCATATCAAACAACT+AGG | 0.623363 | 5.3:-7462491 | MS.gene21473:CDS |
| ATTATGGAGTTGAATGCTGC+GGG | 0.626580 | 5.3:+7464302 | None:intergenic |
| CTTCTGTATTTCCAAGCACG+TGG | 0.628093 | 5.3:-7461447 | MS.gene21473:CDS |
| GATGACGTCAAGTGTTCCCA+TGG | 0.629397 | 5.3:-7461501 | MS.gene21473:CDS |
| ACGGTGGTTTATGTACCGGA+GGG | 0.631873 | 5.3:-7463765 | MS.gene21473:CDS |
| GGGTGCACCGGATTTGACGG+TGG | 0.641084 | 5.3:-7463781 | MS.gene21473:CDS |
| GTCTGTTGGTAATCAAACAC+AGG | 0.643557 | 5.3:-7462432 | MS.gene21473:CDS |
| TGGTGAGGTTGATATAGTTG+AGG | 0.647326 | 5.3:-7463628 | MS.gene21473:CDS |
| GGAGGATTTGGGAAGAACGG+AGG | 0.648249 | 5.3:+7464033 | None:intergenic |
| AGAAGTCCATTTGATATGCG+CGG | 0.652340 | 5.3:+7463494 | None:intergenic |
| GACGTGGCAGGGGAACTGAT+CGG | 0.662394 | 5.3:+7463971 | None:intergenic |
| TCGTTGCAGAGTAGTAAGGA+AGG | 0.668370 | 5.3:-7463705 | MS.gene21473:CDS |
| GATGTATATATCGAATCCGA+GGG | 0.671373 | 5.3:-7463673 | MS.gene21473:CDS |
| TCAGATTCATAAGTGCATTG+TGG | 0.677608 | 5.3:-7462363 | MS.gene21473:CDS |
| CTTGTATTGGATCATCCAAG+GGG | 0.694144 | 5.3:-7462395 | MS.gene21473:CDS |
| TTGGTATCTGGATTGGACGG+TGG | 0.694952 | 5.3:-7463831 | MS.gene21473:CDS |
| TTAACATTTACAGTTGCACG+AGG | 0.704403 | 5.3:+7461546 | None:intergenic |
| GATTATGGAGTTGAATGCTG+CGG | 0.713690 | 5.3:+7464301 | None:intergenic |
| GCTTCTCTAAGACTGTGGAG+AGG | 0.716052 | 5.3:+7464131 | None:intergenic |
| AGTCTTCTAAGGTTTCAGCG+AGG | 0.795490 | 5.3:+7464171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTGTTATAGATTATAA+AGG | + | chr5.3:7462756-7462775 | None:intergenic | 15.0% |
| !! | TAAACATATATACAATTGTA+AGG | + | chr5.3:7463475-7463494 | None:intergenic | 15.0% |
| !! | TACAATTGTATATATGTTTA+CGG | - | chr5.3:7463475-7463494 | MS.gene21473:intron | 15.0% |
| !!! | AAATTTTTATTTATTGAGCT+TGG | - | chr5.3:7463934-7463953 | MS.gene21473:CDS | 15.0% |
| !! | AAGTCAGATTAAAAGTTTAT+TGG | - | chr5.3:7464306-7464325 | MS.gene21473:CDS | 20.0% |
| !! | AAGTCATTAGATTATATTGT+GGG | + | chr5.3:7463885-7463904 | None:intergenic | 20.0% |
| !! | ATTACTAACAAAATTAGCAT+TGG | + | chr5.3:7463610-7463629 | None:intergenic | 20.0% |
| !! | GAGTATGAATTTATTGTTTA+TGG | - | chr5.3:7462310-7462329 | MS.gene21473:intron | 20.0% |
| !! | TAAGTCATTAGATTATATTG+TGG | + | chr5.3:7463886-7463905 | None:intergenic | 20.0% |
| !! | TAGAAAAAATTTGACATGAT+TGG | - | chr5.3:7463036-7463055 | MS.gene21473:intron | 20.0% |
| !! | TTATTGTTTATGGAATGAAA+AGG | - | chr5.3:7462320-7462339 | MS.gene21473:CDS | 20.0% |
| ! | AATCTTCATATCAAACAACT+AGG | - | chr5.3:7463143-7463162 | MS.gene21473:intron | 25.0% |
| ! | AGTCATTAGATTATATTGTG+GGG | + | chr5.3:7463884-7463903 | None:intergenic | 25.0% |
| ! | AGTGTATTAGTGATATAAAG+TGG | + | chr5.3:7464004-7464023 | None:intergenic | 25.0% |
| ! | ATTGTTAGCATTAATTATGC+TGG | - | chr5.3:7463628-7463647 | MS.gene21473:CDS | 25.0% |
| ! | GTTAGAAACTAATCGAAAAT+TGG | + | chr5.3:7463388-7463407 | None:intergenic | 25.0% |
| ! | TAATGGCTAACTATATACAA+AGG | - | chr5.3:7462855-7462874 | MS.gene21473:intron | 25.0% |
| ! | TATGCAATTCTTAGTGTTAT+AGG | - | chr5.3:7462486-7462505 | MS.gene21473:CDS | 25.0% |
| ! | TATGTTGGAATAGTAAAACT+GGG | - | chr5.3:7462344-7462363 | MS.gene21473:CDS | 25.0% |
| ! | TATGTTTACGGAGAAATTAA+CGG | - | chr5.3:7463487-7463506 | MS.gene21473:CDS | 25.0% |
| ! | TGTGATTGTTAAACATTTAC+AGG | - | chr5.3:7463061-7463080 | MS.gene21473:intron | 25.0% |
| ! | TTAGTGCAAAAATGTTCTTA+TGG | - | chr5.3:7462815-7462834 | MS.gene21473:intron | 25.0% |
| ! | TTATGTTGGAATAGTAAAAC+TGG | - | chr5.3:7462343-7462362 | MS.gene21473:CDS | 25.0% |
| ! | TTCCTACATAAAAGACTAAA+AGG | + | chr5.3:7463763-7463782 | None:intergenic | 25.0% |
| ! | TTGTTAGCATTAATTATGCT+GGG | - | chr5.3:7463629-7463648 | MS.gene21473:CDS | 25.0% |
| !! | CTAATACACTATTCTTGTTT+AGG | - | chr5.3:7464014-7464033 | MS.gene21473:CDS | 25.0% |
| !! | GGTAATTTGTCAAATTTGAA+CGG | - | chr5.3:7461755-7461774 | MS.gene21473:intron | 25.0% |
| !! | TACAATAACAAGGGTATATA+AGG | + | chr5.3:7463725-7463744 | None:intergenic | 25.0% |
| !!! | GATTTATTTTGGTCGATTAA+TGG | - | chr5.3:7461827-7461846 | MS.gene21473:intron | 25.0% |
| AAATTGCAAGTGATTCCATT+AGG | + | chr5.3:7462659-7462678 | None:intergenic | 30.0% | |
| AATAGTAAAACTGGGTCTAA+AGG | - | chr5.3:7462352-7462371 | MS.gene21473:CDS | 30.0% | |
| ATATAGTTGAGGAGTTTGAA+GGG | - | chr5.3:7462017-7462036 | MS.gene21473:intron | 30.0% | |
| ATGATGAAGAAGAAGATGAT+GGG | + | chr5.3:7461358-7461377 | None:intergenic | 30.0% | |
| ATGGAATGAAAAGGTTATGT+TGG | - | chr5.3:7462329-7462348 | MS.gene21473:CDS | 30.0% | |
| CACACGAAATGCAAAAATAA+AGG | + | chr5.3:7462925-7462944 | None:intergenic | 30.0% | |
| CTATCTCTAATGGAAGAATT+AGG | + | chr5.3:7464280-7464299 | None:intergenic | 30.0% | |
| GCAATTTATCTTCTAGTATC+TGG | - | chr5.3:7462672-7462691 | MS.gene21473:intron | 30.0% | |
| GCTAACTATATACAAAGGAA+GGG | - | chr5.3:7462860-7462879 | MS.gene21473:intron | 30.0% | |
| GGATATACGTACAATAACAA+GGG | + | chr5.3:7463734-7463753 | None:intergenic | 30.0% | |
| GTGTTATAGGTATAATGTTG+CGG | - | chr5.3:7462499-7462518 | MS.gene21473:CDS | 30.0% | |
| GTTATCAAAGAAGTAGTCAT+AGG | + | chr5.3:7462439-7462458 | None:intergenic | 30.0% | |
| TAAAAGACTAAAAGGCAGTT+TGG | + | chr5.3:7463755-7463774 | None:intergenic | 30.0% | |
| TACAATTGTAAGGACTTCTT+CGG | + | chr5.3:7463465-7463484 | None:intergenic | 30.0% | |
| TGGATATACGTACAATAACA+AGG | + | chr5.3:7463735-7463754 | None:intergenic | 30.0% | |
| TTTATTTATTGAGCTTGGAC+AGG | - | chr5.3:7463939-7463958 | MS.gene21473:CDS | 30.0% | |
| ! | AACAATACAAGAGTGGATTT+AGG | - | chr5.3:7463362-7463381 | MS.gene21473:intron | 30.0% |
| ! | AAGGGTATATAAGGTTTGTT+TGG | + | chr5.3:7463716-7463735 | None:intergenic | 30.0% |
| ! | ACTTTTGACGAAGAAGATAA+TGG | - | chr5.3:7462838-7462857 | MS.gene21473:intron | 30.0% |
| ! | GGAATGATAATGAGTGTTAT+TGG | - | chr5.3:7462038-7462057 | MS.gene21473:intron | 30.0% |
| ! | GTGCTTTTATGTATCAAGAA+TGG | - | chr5.3:7463784-7463803 | MS.gene21473:CDS | 30.0% |
| ! | TTCTAATTTTTGCCTTTGGA+GGG | - | chr5.3:7464236-7464255 | MS.gene21473:CDS | 30.0% |
| ! | TTTTGGTCGATTAATGGAAT+GGG | - | chr5.3:7461833-7461852 | MS.gene21473:intron | 30.0% |
| !! | ACTACTTCTTTGATAACGAA+GGG | - | chr5.3:7462442-7462461 | MS.gene21473:CDS | 30.0% |
| !! | ATTTTGGTCGATTAATGGAA+TGG | - | chr5.3:7461832-7461851 | MS.gene21473:intron | 30.0% |
| !! | TGCCTTTTAGTCTTTTATGT+AGG | - | chr5.3:7463758-7463777 | MS.gene21473:CDS | 30.0% |
| !! | TTATTGGAGTAATGCTGTTT+TGG | - | chr5.3:7462054-7462073 | MS.gene21473:intron | 30.0% |
| AATGCACTTATGAATCTGAC+GGG | + | chr5.3:7463270-7463289 | None:intergenic | 35.0% | |
| ACAATCAACGTCGAAAATCT+CGG | - | chr5.3:7461709-7461728 | MS.gene21473:intron | 35.0% | |
| ACTTCGTACTCTATCTCTAA+TGG | + | chr5.3:7464290-7464309 | None:intergenic | 35.0% | |
| AGATGTATATATCGAATCCG+AGG | - | chr5.3:7461960-7461979 | MS.gene21473:intron | 35.0% | |
| CAATGCACTTATGAATCTGA+CGG | + | chr5.3:7463271-7463290 | None:intergenic | 35.0% | |
| CTTCTTCGGTTCTTCATAAA+TGG | + | chr5.3:7463451-7463470 | None:intergenic | 35.0% | |
| GATACATAACCCAAATGAAC+CGG | + | chr5.3:7461911-7461930 | None:intergenic | 35.0% | |
| GATATAGTTGAGGAGTTTGA+AGG | - | chr5.3:7462016-7462035 | MS.gene21473:intron | 35.0% | |
| GATGATGAAGAAGAAGATGA+TGG | + | chr5.3:7461359-7461378 | None:intergenic | 35.0% | |
| GATGTATATATCGAATCCGA+GGG | - | chr5.3:7461961-7461980 | MS.gene21473:intron | 35.0% | |
| GGCTAACTATATACAAAGGA+AGG | - | chr5.3:7462859-7462878 | MS.gene21473:intron | 35.0% | |
| TAATTTCACCTGTCTTGCTA+TGG | - | chr5.3:7463543-7463562 | MS.gene21473:CDS | 35.0% | |
| TCAGATTCATAAGTGCATTG+TGG | - | chr5.3:7463271-7463290 | MS.gene21473:intron | 35.0% | |
| TCATATCAAACAACTAGGTC+CGG | - | chr5.3:7463148-7463167 | MS.gene21473:intron | 35.0% | |
| TCTTGTATTGGATCATCCAA+GGG | - | chr5.3:7463238-7463257 | MS.gene21473:intron | 35.0% | |
| TGATTCAGAAACAGCTAGAA+GGG | - | chr5.3:7464213-7464232 | MS.gene21473:CDS | 35.0% | |
| TTAACATTTACAGTTGCACG+AGG | + | chr5.3:7464091-7464110 | None:intergenic | 35.0% | |
| TTGATTCAGAAACAGCTAGA+AGG | - | chr5.3:7464212-7464231 | MS.gene21473:CDS | 35.0% | |
| TTTGCACAACAATACAAGAG+TGG | - | chr5.3:7463355-7463374 | MS.gene21473:intron | 35.0% | |
| ! | AAAATCTCGGAGTTTTCAGA+TGG | - | chr5.3:7461722-7461741 | MS.gene21473:intron | 35.0% |
| ! | AAATCTCGGAGTTTTCAGAT+GGG | - | chr5.3:7461723-7461742 | MS.gene21473:intron | 35.0% |
| ! | AGTGGCATCATTTTGTCATT+AGG | - | chr5.3:7462702-7462721 | MS.gene21473:intron | 35.0% |
| ! | AGTTTTTGATGGAAACGTCA+AGG | - | chr5.3:7463313-7463332 | MS.gene21473:intron | 35.0% |
| ! | ATAAGGTTTGTTTGGTGGTT+GGG | + | chr5.3:7463708-7463727 | None:intergenic | 35.0% |
| ! | GGTATATAAGGTTTGTTTGG+TGG | + | chr5.3:7463713-7463732 | None:intergenic | 35.0% |
| ! | GTTCTAATTTTTGCCTTTGG+AGG | - | chr5.3:7464235-7464254 | MS.gene21473:CDS | 35.0% |
| ! | TATAAGGTTTGTTTGGTGGT+TGG | + | chr5.3:7463709-7463728 | None:intergenic | 35.0% |
| ! | TCAGCAATGATTTGGAGATT+TGG | + | chr5.3:7464115-7464134 | None:intergenic | 35.0% |
| ! | TTTGGAATTGGTATCTGGAT+TGG | - | chr5.3:7461796-7461815 | MS.gene21473:intron | 35.0% |
| !! | AGAAGAAGATGATGGGATTA+TGG | + | chr5.3:7461351-7461370 | None:intergenic | 35.0% |
| !! | AGGGTTCTAATTTTTGCCTT+TGG | - | chr5.3:7464232-7464251 | MS.gene21473:CDS | 35.0% |
| !! | CTACTTCTTTGATAACGAAG+GGG | - | chr5.3:7462443-7462462 | MS.gene21473:CDS | 35.0% |
| !! | GACTACTTCTTTGATAACGA+AGG | - | chr5.3:7462441-7462460 | MS.gene21473:CDS | 35.0% |
| !! | TCTAATTTTTGCCTTTGGAG+GGG | - | chr5.3:7464237-7464256 | MS.gene21473:CDS | 35.0% |
| !! | TCTTCACAGTAGTCTTGTAT+TGG | - | chr5.3:7463226-7463245 | MS.gene21473:intron | 35.0% |
| !! | TTTTGAGAAGTTACGCAAGA+GGG | - | chr5.3:7463007-7463026 | MS.gene21473:intron | 35.0% |
| !! | TTTTTGAGAAGTTACGCAAG+AGG | - | chr5.3:7463006-7463025 | MS.gene21473:intron | 35.0% |
| AAACTGGGTCTAAAGGAAAG+AGG | - | chr5.3:7462359-7462378 | MS.gene21473:CDS | 40.0% | |
| AAAGGAAGGGCAATCTAGTT+AGG | - | chr5.3:7462873-7462892 | MS.gene21473:intron | 40.0% | |
| AAGGGCAATCTAGTTAGGAT+AGG | - | chr5.3:7462878-7462897 | MS.gene21473:intron | 40.0% | |
| AATCTCTTCTCTCTTCTCCA+TGG | - | chr5.3:7461534-7461553 | MS.gene21473:CDS | 40.0% | |
| ACATAAACCACCGTCAAATC+CGG | + | chr5.3:7461863-7461882 | None:intergenic | 40.0% | |
| AGAAGTCCATTTGATATGCG+CGG | + | chr5.3:7462143-7462162 | None:intergenic | 40.0% | |
| AGCTCATATTCACCGATAAG+TGG | + | chr5.3:7462612-7462631 | None:intergenic | 40.0% | |
| ATGGAAACGTCAAGGTTAAC+AGG | - | chr5.3:7463321-7463340 | MS.gene21473:intron | 40.0% | |
| ATTATGGAGTTGAATGCTGC+GGG | + | chr5.3:7461335-7461354 | None:intergenic | 40.0% | |
| ATTTATTGAGCTTGGACAGG+TGG | - | chr5.3:7463942-7463961 | MS.gene21473:CDS | 40.0% | |
| CTAGTATCTGGTAGAAGTAG+TGG | - | chr5.3:7462684-7462703 | MS.gene21473:intron | 40.0% | |
| CTTGTATTGGATCATCCAAG+GGG | - | chr5.3:7463239-7463258 | MS.gene21473:intron | 40.0% | |
| GATTATGGAGTTGAATGCTG+CGG | + | chr5.3:7461336-7461355 | None:intergenic | 40.0% | |
| GCATTAATTATGCTGGGAGT+AGG | - | chr5.3:7463635-7463654 | MS.gene21473:CDS | 40.0% | |
| GCTCATATTCACCGATAAGT+GGG | + | chr5.3:7462611-7462630 | None:intergenic | 40.0% | |
| GTATCAATCCATAGCAAGAC+AGG | + | chr5.3:7463554-7463573 | None:intergenic | 40.0% | |
| GTCTTGTATTGGATCATCCA+AGG | - | chr5.3:7463237-7463256 | MS.gene21473:intron | 40.0% | |
| GTGCTTGGAAATACAGAAGT+TGG | + | chr5.3:7464186-7464205 | None:intergenic | 40.0% | |
| GTTGAAACTCCGGTTCATTT+GGG | - | chr5.3:7461899-7461918 | MS.gene21473:intron | 40.0% | |
| TCAACTTTGCACTTGTCTGT+TGG | - | chr5.3:7463188-7463207 | MS.gene21473:intron | 40.0% | |
| TGACGTCATCAGCAATGATT+TGG | + | chr5.3:7464123-7464142 | None:intergenic | 40.0% | |
| TGTATCGTTGCAGAGTAGTA+AGG | - | chr5.3:7461925-7461944 | MS.gene21473:intron | 40.0% | |
| TTTGACGGTGGTTTATGTAC+CGG | - | chr5.3:7461865-7461884 | MS.gene21473:intron | 40.0% | |
| TTTGAGAAGTTACGCAAGAG+GGG | - | chr5.3:7463008-7463027 | MS.gene21473:intron | 40.0% | |
| ! | AATCTCGGAGTTTTCAGATG+GGG | - | chr5.3:7461724-7461743 | MS.gene21473:intron | 40.0% |
| ! | AGTAGAGCTAAAAGCACAAC+GGG | + | chr5.3:7462564-7462583 | None:intergenic | 40.0% |
| ! | AGTTAAAGAGTGGAGTGCTA+AGG | + | chr5.3:7463678-7463697 | None:intergenic | 40.0% |
| ! | GAATTGGTATCTGGATTGGA+CGG | - | chr5.3:7461800-7461819 | MS.gene21473:intron | 40.0% |
| ! | GAGTAGAGCTAAAAGCACAA+CGG | + | chr5.3:7462565-7462584 | None:intergenic | 40.0% |
| ! | TAAGGTTTGTTTGGTGGTTG+GGG | + | chr5.3:7463707-7463726 | None:intergenic | 40.0% |
| ! | TATATCGAATCCGAGGGTTT+TGG | - | chr5.3:7461967-7461986 | MS.gene21473:intron | 40.0% |
| ! | TGGACGGTGGAGATTTATTT+TGG | - | chr5.3:7461816-7461835 | MS.gene21473:intron | 40.0% |
| ! | TGTGTTTCTGATGCTGATTG+AGG | - | chr5.3:7463850-7463869 | MS.gene21473:CDS | 40.0% |
| ! | TTTTCAGATGGGGTTTACGT+TGG | - | chr5.3:7461734-7461753 | MS.gene21473:intron | 40.0% |
| !! | AAAGGTTCGTGTTTTCGAGA+AGG | + | chr5.3:7461560-7461579 | None:intergenic | 40.0% |
| !! | AAGAAGCTTCTCTAAGACTG+TGG | + | chr5.3:7461511-7461530 | None:intergenic | 40.0% |
| !! | GTCTGTTGGTAATCAAACAC+AGG | - | chr5.3:7463202-7463221 | MS.gene21473:intron | 40.0% |
| !! | GTTGAATGTGACTCTGGTTT+TGG | + | chr5.3:7461405-7461424 | None:intergenic | 40.0% |
| !! | TGGTGAGGTTGATATAGTTG+AGG | - | chr5.3:7462006-7462025 | MS.gene21473:intron | 40.0% |
| !!! | AGGGTTTTGGAATTGGTATC+TGG | - | chr5.3:7461791-7461810 | MS.gene21473:intron | 40.0% |
| !!! | CTGTTTTGGAGGTTGTGATT+GGG | - | chr5.3:7462068-7462087 | MS.gene21473:intron | 40.0% |
| !!! | TGCTAAGAGGGTTTTGGAAT+TGG | - | chr5.3:7461784-7461803 | MS.gene21473:intron | 40.0% |
| !!! | TGTTTTGGAGGTTGTGATTG+GGG | - | chr5.3:7462069-7462088 | MS.gene21473:intron | 40.0% |
| !!! | TTGGAGTAATGCTGTTTTGG+AGG | - | chr5.3:7462057-7462076 | MS.gene21473:intron | 40.0% |
| ATCTATCACTTCCCCTCCAA+AGG | + | chr5.3:7464251-7464270 | None:intergenic | 45.0% | |
| CAAGTGATTCCATTAGGTCC+AGG | + | chr5.3:7462653-7462672 | None:intergenic | 45.0% | |
| CTTACAGAAGTAAGCACAGG+AGG | - | chr5.3:7463104-7463123 | MS.gene21473:intron | 45.0% | |
| CTTCTGTATTTCCAAGCACG+TGG | - | chr5.3:7464187-7464206 | MS.gene21473:CDS | 45.0% | |
| GAGAAGTCGTTGAAGCGAAA+AGG | + | chr5.3:7461578-7461597 | None:intergenic | 45.0% | |
| GAGCTTACAGAAGTAAGCAC+AGG | - | chr5.3:7463101-7463120 | MS.gene21473:intron | 45.0% | |
| GATAACTCTGTCACTGTGTC+CGG | + | chr5.3:7463170-7463189 | None:intergenic | 45.0% | |
| GATTAATGGAATGGGTGCAC+CGG | - | chr5.3:7461841-7461860 | MS.gene21473:intron | 45.0% | |
| GGTTGAAACTCCGGTTCATT+TGG | - | chr5.3:7461898-7461917 | MS.gene21473:intron | 45.0% | |
| GTCACTTATTGCAGCTCCAT+GGG | + | chr5.3:7464152-7464171 | None:intergenic | 45.0% | |
| TCGTTGCAGAGTAGTAAGGA+AGG | - | chr5.3:7461929-7461948 | MS.gene21473:intron | 45.0% | |
| TGCATTGTGGCTCATTCACA+GGG | - | chr5.3:7463284-7463303 | MS.gene21473:intron | 45.0% | |
| TGCGTTGTTGAATGTGACTC+TGG | + | chr5.3:7461411-7461430 | None:intergenic | 45.0% | |
| TTGCACGAGGTTCAAGAAGA+AGG | + | chr5.3:7464078-7464097 | None:intergenic | 45.0% | |
| ! | AAAAGCACAACGGGCATAGT+GGG | + | chr5.3:7462555-7462574 | None:intergenic | 45.0% |
| ! | CAAATGGACTTCTGTTCGTC+AGG | - | chr5.3:7462150-7462169 | MS.gene21473:intron | 45.0% |
| ! | CAGGGACAAGCAGTTTTTGA+TGG | - | chr5.3:7463302-7463321 | MS.gene21473:intron | 45.0% |
| ! | TAAAAGCACAACGGGCATAG+TGG | + | chr5.3:7462556-7462575 | None:intergenic | 45.0% |
| ! | TAAAGAGTGGAGTGCTAAGG+AGG | + | chr5.3:7463675-7463694 | None:intergenic | 45.0% |
| ! | TGCTGTTGCTAAGAGGGTTT+TGG | - | chr5.3:7461778-7461797 | MS.gene21473:intron | 45.0% |
| !! | ACAGAAGTTGGCTTTGTTCC+AGG | + | chr5.3:7464174-7464193 | None:intergenic | 45.0% |
| !! | AGTCTTCTAAGGTTTCAGCG+AGG | + | chr5.3:7461466-7461485 | None:intergenic | 45.0% |
| !!! | GCTGTTTTGGAGGTTGTGAT+TGG | - | chr5.3:7462067-7462086 | MS.gene21473:intron | 45.0% |
| AAAGCACAACGGGCATAGTG+GGG | + | chr5.3:7462554-7462573 | None:intergenic | 50.0% | |
| AATCGCTCGTGCATAGCAGA+GGG | + | chr5.3:7462587-7462606 | None:intergenic | 50.0% | |
| AATGGGTGCACCGGATTTGA+CGG | - | chr5.3:7461850-7461869 | MS.gene21473:intron | 50.0% | |
| ACGAGCGATTGCCCACTTAT+CGG | - | chr5.3:7462597-7462616 | MS.gene21473:intron | 50.0% | |
| ACGGTGGTTTATGTACCGGA+GGG | - | chr5.3:7461869-7461888 | MS.gene21473:intron | 50.0% | |
| ATCTGACGGGAATAACCCCT+TGG | + | chr5.3:7463257-7463276 | None:intergenic | 50.0% | |
| CAGCGAGGTCGAGAATGAAT+GGG | + | chr5.3:7461451-7461470 | None:intergenic | 50.0% | |
| CAGTCACTACCTGGACCTAA+TGG | - | chr5.3:7462641-7462660 | MS.gene21473:intron | 50.0% | |
| CATTAGGTCCAGGTAGTGAC+TGG | + | chr5.3:7462643-7462662 | None:intergenic | 50.0% | |
| CTAAGACTGTGGAGAGGTTG+TGG | + | chr5.3:7461500-7461519 | None:intergenic | 50.0% | |
| CTGAATCAATGCCACGTGCT+TGG | + | chr5.3:7464201-7464220 | None:intergenic | 50.0% | |
| GATGACGTCAAGTGTTCCCA+TGG | - | chr5.3:7464133-7464152 | MS.gene21473:CDS | 50.0% | |
| GATTTGGGAAGAACGGAGGA+AGG | + | chr5.3:7461600-7461619 | None:intergenic | 50.0% | |
| GGTCACTTATTGCAGCTCCA+TGG | + | chr5.3:7464153-7464172 | None:intergenic | 50.0% | |
| GTAAGCACAGGAGGCAAACT+TGG | - | chr5.3:7463113-7463132 | MS.gene21473:intron | 50.0% | |
| GTACACAACCAGTCACTACC+TGG | - | chr5.3:7462632-7462651 | MS.gene21473:intron | 50.0% | |
| GTGCATTGTGGCTCATTCAC+AGG | - | chr5.3:7463283-7463302 | MS.gene21473:intron | 50.0% | |
| GTTTCAACCTGAACACCCTC+CGG | + | chr5.3:7461887-7461906 | None:intergenic | 50.0% | |
| TATGCTCAGCAGACAGATGC+TGG | - | chr5.3:7464037-7464056 | MS.gene21473:CDS | 50.0% | |
| TCAGCGAGGTCGAGAATGAA+TGG | + | chr5.3:7461452-7461471 | None:intergenic | 50.0% | |
| TGCTTGCCGCGCATATCAAA+TGG | - | chr5.3:7462134-7462153 | MS.gene21473:intron | 50.0% | |
| TGGAGCTGCAATAAGTGACC+TGG | - | chr5.3:7464153-7464172 | MS.gene21473:CDS | 50.0% | |
| TGTAGGGACGGAGTCTTCTA+AGG | + | chr5.3:7461477-7461496 | None:intergenic | 50.0% | |
| TGTGGAGAGGTTGTGGTGTA+GGG | + | chr5.3:7461493-7461512 | None:intergenic | 50.0% | |
| TTGGAGGTTGTGATTGGGGA+AGG | - | chr5.3:7462073-7462092 | MS.gene21473:intron | 50.0% | |
| ! | AGTGGAGTGCTAAGGAGGTT+GGG | + | chr5.3:7463670-7463689 | None:intergenic | 50.0% |
| ! | GTTTGTTTGGTGGTTGGGGT+GGG | + | chr5.3:7463703-7463722 | None:intergenic | 50.0% |
| ! | TTGGTATCTGGATTGGACGG+TGG | - | chr5.3:7461803-7461822 | MS.gene21473:intron | 50.0% |
| ! | TTTGTTTGGTGGTTGGGGTG+GGG | + | chr5.3:7463702-7463721 | None:intergenic | 50.0% |
| !! | ATCGAATCCGAGGGTTTTGG+TGG | - | chr5.3:7461970-7461989 | MS.gene21473:intron | 50.0% |
| !! | GAACGGTGCTGTTGCTAAGA+GGG | - | chr5.3:7461772-7461791 | MS.gene21473:intron | 50.0% |
| !! | GCTTCTCTAAGACTGTGGAG+AGG | + | chr5.3:7461506-7461525 | None:intergenic | 50.0% |
| !! | GGGTGTTCAGGTTGAAACTC+CGG | - | chr5.3:7461889-7461908 | MS.gene21473:intron | 50.0% |
| !! | TCGTGTTTTCGAGAAGGCCA+TGG | + | chr5.3:7461554-7461573 | None:intergenic | 50.0% |
| !! | TGAACGGTGCTGTTGCTAAG+AGG | - | chr5.3:7461771-7461790 | MS.gene21473:intron | 50.0% |
| !! | TTATGTACCGGAGGGTGTTC+AGG | - | chr5.3:7461877-7461896 | MS.gene21473:intron | 50.0% |
| !! | TTGGTGGTGGTGGAGAATGA+TGG | - | chr5.3:7461986-7462005 | MS.gene21473:intron | 50.0% |
| CAATCGCTCGTGCATAGCAG+AGG | + | chr5.3:7462588-7462607 | None:intergenic | 55.0% | |
| CGGGGAGGATTTGGGAAGAA+CGG | + | chr5.3:7461607-7461626 | None:intergenic | 55.0% | |
| CTGTGGAGAGGTTGTGGTGT+AGG | + | chr5.3:7461494-7461513 | None:intergenic | 55.0% | |
| GACGGTGGTTTATGTACCGG+AGG | - | chr5.3:7461868-7461887 | MS.gene21473:intron | 55.0% | |
| GAGAGGTTGTGGTGTAGGGA+CGG | + | chr5.3:7461489-7461508 | None:intergenic | 55.0% | |
| GAGGTTGTGATTGGGGAAGG+TGG | - | chr5.3:7462076-7462095 | MS.gene21473:intron | 55.0% | |
| GCACAGGAGGCAAACTTGGA+AGG | - | chr5.3:7463117-7463136 | MS.gene21473:intron | 55.0% | |
| GGAGGATTTGGGAAGAACGG+AGG | + | chr5.3:7461604-7461623 | None:intergenic | 55.0% | |
| GGGGTGGGGAAGTTAAAGAG+TGG | + | chr5.3:7463688-7463707 | None:intergenic | 55.0% | |
| TCAACGATGCTGACGTGGCA+GGG | + | chr5.3:7461677-7461696 | None:intergenic | 55.0% | |
| TCCACCACCACCAAAACCCT+CGG | + | chr5.3:7461980-7461999 | None:intergenic | 55.0% | |
| TGCCACGTCAGCATCGTTGA+CGG | - | chr5.3:7461677-7461696 | MS.gene21473:intron | 55.0% | |
| TGTGATTGGGGAAGGTGGCA+AGG | - | chr5.3:7462081-7462100 | MS.gene21473:intron | 55.0% | |
| ! | GAGTGGAGTGCTAAGGAGGT+TGG | + | chr5.3:7463671-7463690 | None:intergenic | 55.0% |
| ! | GGTTTGTTTGGTGGTTGGGG+TGG | + | chr5.3:7463704-7463723 | None:intergenic | 55.0% |
| !! | GAATCCGAGGGTTTTGGTGG+TGG | - | chr5.3:7461973-7461992 | MS.gene21473:intron | 55.0% |
| !! | GGTGGTGGAGAATGATGGTG+AGG | - | chr5.3:7461991-7462010 | MS.gene21473:intron | 55.0% |
| !! | TGGTGGTGGTGGTTGGGATT+GGG | + | chr5.3:7461631-7461650 | None:intergenic | 55.0% |
| CAACGATGCTGACGTGGCAG+GGG | + | chr5.3:7461676-7461695 | None:intergenic | 60.0% | |
| GAACTGATCGGTTGCGGTGG+TGG | + | chr5.3:7461654-7461673 | None:intergenic | 60.0% | |
| GACGTGGCAGGGGAACTGAT+CGG | + | chr5.3:7461666-7461685 | None:intergenic | 60.0% | |
| GATTGGGGCGGGGAGGATTT+GGG | + | chr5.3:7461615-7461634 | None:intergenic | 60.0% | |
| GCAGGGGAACTGATCGGTTG+CGG | + | chr5.3:7461660-7461679 | None:intergenic | 60.0% | |
| GTCAACGATGCTGACGTGGC+AGG | + | chr5.3:7461678-7461697 | None:intergenic | 60.0% | |
| GTCCGTCAACGATGCTGACG+TGG | + | chr5.3:7461682-7461701 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTTGGGATTG+GGG | + | chr5.3:7461630-7461649 | None:intergenic | 60.0% |
| !! | GTGGTGGTGGTGGTTGGGAT+TGG | + | chr5.3:7461632-7461651 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTGGTGGTGGTT+GGG | + | chr5.3:7461637-7461656 | None:intergenic | 60.0% |
| !!! | TCCGAGGGTTTTGGTGGTGG+TGG | - | chr5.3:7461976-7461995 | MS.gene21473:intron | 60.0% |
| GGATTGGGGCGGGGAGGATT+TGG | + | chr5.3:7461616-7461635 | None:intergenic | 65.0% | |
| GGGGAACTGATCGGTTGCGG+TGG | + | chr5.3:7461657-7461676 | None:intergenic | 65.0% | |
| GGGTGCACCGGATTTGACGG+TGG | - | chr5.3:7461853-7461872 | MS.gene21473:intron | 65.0% | |
| GTGGTGGTTGGGATTGGGGC+GGG | + | chr5.3:7461626-7461645 | None:intergenic | 65.0% | |
| TGGTGGTTGGGATTGGGGCG+GGG | + | chr5.3:7461625-7461644 | None:intergenic | 65.0% | |
| ! | CTGATCGGTTGCGGTGGTGG+TGG | + | chr5.3:7461651-7461670 | None:intergenic | 65.0% |
| ! | GGTGGTGGTTGGGATTGGGG+CGG | + | chr5.3:7461627-7461646 | None:intergenic | 65.0% |
| !! | ATCGGTTGCGGTGGTGGTGG+TGG | + | chr5.3:7461648-7461667 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGT+TGG | + | chr5.3:7461638-7461657 | None:intergenic | 65.0% |
| TGGTTGGGATTGGGGCGGGG+AGG | + | chr5.3:7461622-7461641 | None:intergenic | 70.0% | |
| !! | GGTTGCGGTGGTGGTGGTGG+TGG | + | chr5.3:7461645-7461664 | None:intergenic | 70.0% |
| !! | TGCGGTGGTGGTGGTGGTGG+TGG | + | chr5.3:7461642-7461661 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 7461311 | 7464345 | 7461311 | ID=MS.gene21473 |
| chr5.3 | mRNA | 7461311 | 7464345 | 7461311 | ID=MS.gene21473.t1;Parent=MS.gene21473 |
| chr5.3 | exon | 7463485 | 7464345 | 7463485 | ID=MS.gene21473.t1.exon1;Parent=MS.gene21473.t1 |
| chr5.3 | CDS | 7463485 | 7464345 | 7463485 | ID=cds.MS.gene21473.t1;Parent=MS.gene21473.t1 |
| chr5.3 | exon | 7462314 | 7462573 | 7462314 | ID=MS.gene21473.t1.exon2;Parent=MS.gene21473.t1 |
| chr5.3 | CDS | 7462314 | 7462573 | 7462314 | ID=cds.MS.gene21473.t1;Parent=MS.gene21473.t1 |
| chr5.3 | exon | 7461311 | 7461620 | 7461311 | ID=MS.gene21473.t1.exon3;Parent=MS.gene21473.t1 |
| chr5.3 | CDS | 7461311 | 7461620 | 7461311 | ID=cds.MS.gene21473.t1;Parent=MS.gene21473.t1 |
| Gene Sequence |
| Protein sequence |
