Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24455.t1 | XP_024628409.1 | 97.1 | 376 | 11 | 0 | 12 | 387 | 50 | 425 | 3.00E-222 | 780.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24455.t1 | Q9STX2 | 70.8 | 370 | 107 | 1 | 18 | 387 | 20 | 388 | 6.1e-160 | 565.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24455.t1 | A0A396JJA9 | 97.1 | 376 | 11 | 0 | 12 | 387 | 50 | 425 | 2.1e-222 | 780.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene24455 | 0.810845 | 9.41E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene24455 | 0.819093 | 1.39E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene24455 | 0.817719 | 2.85E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene24455 | 0.862626 | 4.44E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene24455 | 0.848377 | 6.37E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene24455 | 0.859784 | 3.25E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene24455 | 0.862059 | 6.63E-64 | -1.69E-46 |
| MS.gene049427 | MS.gene24455 | 0.842148 | 3.09E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene24455 | 0.844227 | 8.61E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene24455 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene24455 | 0.842461 | 2.55E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene24455 | 0.850429 | 1.71E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene24455 | 0.833325 | 5.69E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene24455 | 0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene24455 | 0.826917 | 2.08E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene24455 | 0.823085 | 1.67E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene24455 | 0.83559 | 1.54E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene24455 | 0.858144 | 1.01E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene24455 | 0.826219 | 3.06E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene24455 | 0.821241 | 4.48E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene24455 | 0.814136 | 1.80E-51 | -1.69E-46 |
| MS.gene050686 | MS.gene24455 | 0.802132 | 6.48E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene24455 | 0.831387 | 1.72E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene24455 | 0.84347 | 1.37E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene24455 | 0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene050770 | MS.gene24455 | 0.808451 | 3.08E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene24455 | 0.873264 | 1.68E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene24455 | 0.829499 | 4.97E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene24455 | 0.844949 | 5.51E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene24455 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene24455 | 0.835436 | 1.68E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene24455 | 0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene24455 | 0.83804 | 3.64E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene24455 | 0.826039 | 3.38E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene24455 | 0.812336 | 4.46E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene24455 | 0.841631 | 4.23E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene24455 | 0.850979 | 1.20E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene24455 | 0.824787 | 6.68E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene24455 | 0.841279 | 5.23E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene24455 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene24455 | 0.83755 | 4.87E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene24455 | 0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene24455 | 0.824662 | 7.15E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene24455 | 0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene24455 | 0.856896 | 2.36E-62 | -1.69E-46 |
| MS.gene052870 | MS.gene24455 | 0.818197 | 2.22E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene24455 | 0.827139 | 1.85E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene24455 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene24455 | 0.827945 | 1.18E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene24455 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene24455 | 0.86489 | 8.78E-65 | -1.69E-46 |
| MS.gene053117 | MS.gene24455 | 0.801407 | 9.14E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene24455 | 0.840754 | 7.19E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene24455 | 0.865217 | 6.93E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene24455 | 0.858645 | 7.15E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene24455 | 0.854414 | 1.25E-61 | -1.69E-46 |
| MS.gene053436 | MS.gene24455 | 0.800038 | 1.74E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene24455 | 0.84887 | 4.65E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene24455 | 0.873865 | 1.06E-67 | -1.69E-46 |
| MS.gene053824 | MS.gene24455 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene24455 | 0.825389 | 4.82E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene24455 | 0.803379 | 3.58E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene24455 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene24455 | 0.806867 | 6.68E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene24455 | 0.835099 | 2.04E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene24455 | 0.886686 | 2.76E-72 | -1.69E-46 |
| MS.gene054927 | MS.gene24455 | 0.819489 | 1.13E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene24455 | 0.820274 | 7.48E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene24455 | 0.841173 | 5.58E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene24455 | 0.8545 | 1.18E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene24455 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene24455 | 0.825758 | 3.94E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene24455 | 0.828047 | 1.12E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene24455 | 0.834238 | 3.37E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene24455 | 0.808913 | 2.45E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene24455 | 0.843355 | 1.47E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene24455 | 0.849229 | 3.70E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene24455 | 0.825312 | 5.02E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene24455 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene24455 | 0.847285 | 1.27E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene24455 | 0.842383 | 2.67E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene24455 | 0.852985 | 3.22E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene24455 | 0.825924 | 3.59E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene24455 | -0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene24455 | 0.814856 | 1.25E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene24455 | 0.844258 | 8.45E-59 | -1.69E-46 |
| MS.gene056487 | MS.gene24455 | 0.824459 | 7.98E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene24455 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene24455 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene24455 | 0.874209 | 8.08E-68 | -1.69E-46 |
| MS.gene056897 | MS.gene24455 | 0.806664 | 7.37E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene24455 | 0.838241 | 3.23E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene24455 | 0.840404 | 8.87E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene24455 | 0.852721 | 3.83E-61 | -1.69E-46 |
| MS.gene057146 | MS.gene24455 | 0.825737 | 3.98E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene24455 | 0.829948 | 3.87E-55 | -1.69E-46 |
| MS.gene05735 | MS.gene24455 | 0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene24455 | 0.863614 | 2.20E-64 | -1.69E-46 |
| MS.gene057658 | MS.gene24455 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene24455 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene24455 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene24455 | 0.812662 | 3.79E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene24455 | 0.838814 | 2.30E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene24455 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene24455 | 0.814154 | 1.78E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene24455 | 0.807539 | 4.81E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene24455 | 0.861909 | 7.37E-64 | -1.69E-46 |
| MS.gene058544 | MS.gene24455 | 0.845544 | 3.80E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene24455 | 0.800451 | 1.43E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene24455 | 0.845229 | 4.63E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene24455 | 0.828306 | 9.67E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene24455 | 0.819209 | 1.31E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene24455 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene24455 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene24455 | 0.840766 | 7.13E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene24455 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene24455 | 0.840529 | 8.23E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene24455 | 0.8404 | 8.89E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene24455 | 0.844665 | 6.57E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene24455 | 0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene24455 | 0.806627 | 7.50E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene24455 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene24455 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene24455 | 0.847643 | 1.02E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene24455 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene24455 | 0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene24455 | 0.839995 | 1.14E-57 | -1.69E-46 |
| MS.gene060341 | MS.gene24455 | 0.80654 | 7.83E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene24455 | 0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene060728 | MS.gene24455 | 0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene24455 | 0.881416 | 2.44E-70 | -1.69E-46 |
| MS.gene060818 | MS.gene24455 | 0.829766 | 4.28E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene24455 | 0.839132 | 1.90E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene24455 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene24455 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene24455 | 0.854808 | 9.62E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene24455 | 0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene24455 | 0.825128 | 5.55E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene24455 | 0.842086 | 3.21E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24455.t1 | MTR_1g018590 | 96.825 | 378 | 12 | 0 | 10 | 387 | 17 | 394 | 0.0 | 765 |
| MS.gene24455.t1 | MTR_1g018610 | 88.298 | 376 | 44 | 0 | 12 | 387 | 48 | 423 | 0.0 | 700 |
| MS.gene24455.t1 | MTR_1g018580 | 85.904 | 376 | 29 | 1 | 12 | 387 | 13 | 364 | 0.0 | 668 |
| MS.gene24455.t1 | MTR_3g102760 | 73.315 | 371 | 98 | 1 | 18 | 387 | 20 | 390 | 0.0 | 580 |
| MS.gene24455.t1 | MTR_3g102770 | 72.432 | 370 | 102 | 0 | 18 | 387 | 20 | 389 | 0.0 | 571 |
| MS.gene24455.t1 | MTR_3g013890 | 71.698 | 371 | 104 | 1 | 18 | 387 | 20 | 390 | 0.0 | 564 |
| MS.gene24455.t1 | MTR_3g102730 | 71.698 | 371 | 104 | 1 | 18 | 387 | 20 | 390 | 0.0 | 563 |
| MS.gene24455.t1 | MTR_4g073090 | 42.857 | 371 | 202 | 6 | 24 | 387 | 5 | 372 | 3.24e-96 | 292 |
| MS.gene24455.t1 | MTR_4g121570 | 41.463 | 369 | 206 | 7 | 26 | 387 | 7 | 372 | 1.83e-92 | 282 |
| MS.gene24455.t1 | MTR_4g121590 | 42.049 | 371 | 201 | 8 | 26 | 387 | 7 | 372 | 3.32e-92 | 281 |
| MS.gene24455.t1 | MTR_3g463660 | 38.058 | 381 | 218 | 10 | 18 | 387 | 2 | 375 | 4.54e-77 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24455.t1 | AT4G24220 | 70.811 | 370 | 107 | 1 | 18 | 387 | 20 | 388 | 0.0 | 550 |
| MS.gene24455.t1 | AT4G24220 | 70.811 | 370 | 107 | 1 | 18 | 387 | 19 | 387 | 0.0 | 550 |
| MS.gene24455.t1 | AT5G58750 | 36.483 | 381 | 214 | 15 | 24 | 387 | 8 | 377 | 9.89e-73 | 232 |
| MS.gene24455.t1 | AT5G58750 | 36.483 | 381 | 214 | 15 | 24 | 387 | 16 | 385 | 1.02e-72 | 232 |
Find 106 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAGCTGAACAACATATT+TGG | 0.126207 | 1.1:+4372349 | MS.gene24455:CDS |
| TGGCAAAGATTCAGAGTATT+TGG | 0.162462 | 1.1:-4371611 | None:intergenic |
| AGCATGAGGGTCTTCCTTTA+AGG | 0.227760 | 1.1:+4372271 | MS.gene24455:CDS |
| CGGTTTGAGATCGATGATTA+TGG | 0.235119 | 1.1:+4372465 | MS.gene24455:CDS |
| TTTGAGCCAGGAAACCTTAA+AGG | 0.244750 | 1.1:-4372285 | None:intergenic |
| CTCTTGTGTGTAATAGAAAT+TGG | 0.263026 | 1.1:-4371744 | None:intergenic |
| AATAGCTGAACAACATATTT+GGG | 0.263385 | 1.1:+4372350 | MS.gene24455:CDS |
| GGTCTTCCTTTAAGGTTTCC+TGG | 0.265961 | 1.1:+4372279 | MS.gene24455:CDS |
| CAAAATGTAGCATTGATTAT+AGG | 0.272352 | 1.1:+4371293 | MS.gene24455:CDS |
| GGTGGTCCATGGAAGGTTTA+TGG | 0.276380 | 1.1:+4371374 | MS.gene24455:CDS |
| AACATGGATTCCAGGGATTT+AGG | 0.280913 | 1.1:+4372670 | MS.gene24455:CDS |
| AATCGACCACACCCTATCTT+TGG | 0.298584 | 1.1:+4372186 | MS.gene24455:CDS |
| CTATAATCAATGCTACATTT+TGG | 0.303787 | 1.1:-4371292 | None:intergenic |
| TAAGGTGAAAATCCAAAGAT+AGG | 0.326313 | 1.1:-4372198 | None:intergenic |
| CTAAGAATTCGTTCATTAGT+TGG | 0.343826 | 1.1:+4372697 | MS.gene24455:CDS |
| AAGGCTTCATTCTTTGCATT+AGG | 0.350949 | 1.1:-4372384 | None:intergenic |
| AGCTAAGGAACATGGATTCC+AGG | 0.382372 | 1.1:+4372662 | MS.gene24455:CDS |
| AATATGTGTCACATCAGTTA+AGG | 0.393193 | 1.1:-4371498 | None:intergenic |
| GGCAAAGATTCAGAGTATTT+GGG | 0.402812 | 1.1:-4371610 | None:intergenic |
| TGCCATGTGTCCCTTCAAAC+AGG | 0.417824 | 1.1:+4371629 | MS.gene24455:CDS |
| ATCGGAGATGATGAAGGATA+AGG | 0.418093 | 1.1:+4372515 | MS.gene24455:CDS |
| AAGTTAACGGTTCAATGTTA+AGG | 0.426025 | 1.1:+4371567 | MS.gene24455:CDS |
| TCAGCGTTCCATGTTGGTTG+TGG | 0.429416 | 1.1:-4371410 | None:intergenic |
| AGTGCTTAGTTCCTGTTTGA+AGG | 0.429893 | 1.1:-4371640 | None:intergenic |
| ATCTCCAACTTCTTCAAGCT+TGG | 0.439774 | 1.1:-4372583 | None:intergenic |
| GATCGATGATTATGGATTTG+AGG | 0.440058 | 1.1:+4372473 | MS.gene24455:CDS |
| TCGGAGATGATGAAGGATAA+GGG | 0.442157 | 1.1:+4372516 | MS.gene24455:CDS |
| TGTGCAGATTACAGAATTCA+AGG | 0.451264 | 1.1:+4371253 | MS.gene24455:CDS |
| ATCGCCATTGGTGCAGTTGA+AGG | 0.451831 | 1.1:-4372403 | None:intergenic |
| TTTGAGACTGGAGGGTGTGT+TGG | 0.453672 | 1.1:+4372626 | MS.gene24455:CDS |
| CACACCAAGCTTGAAGAAGT+TGG | 0.454920 | 1.1:+4372579 | MS.gene24455:CDS |
| TTGAGGAGGGGTCGGAGTTG+AGG | 0.458175 | 1.1:+4372490 | MS.gene24455:CDS |
| CCACTTGAAAACATCGCCAT+TGG | 0.461352 | 1.1:-4372415 | None:intergenic |
| TTGAGCCTCTGTGGGCATGC+TGG | 0.461766 | 1.1:-4371537 | None:intergenic |
| CGATCGTTTCGAAGGATCCT+AGG | 0.464183 | 1.1:-4371664 | None:intergenic |
| GGGGTCGGAGTTGAGGTTAT+CGG | 0.468894 | 1.1:+4372497 | MS.gene24455:CDS |
| TACAGTATGATGAACGTCAT+TGG | 0.469218 | 1.1:+4372219 | MS.gene24455:CDS |
| AGCTTGAAGAAGTTGGAGAT+TGG | 0.472593 | 1.1:+4372586 | MS.gene24455:CDS |
| TTAAGGTTTCCTGGCTCAAA+AGG | 0.474340 | 1.1:+4372288 | MS.gene24455:CDS |
| GCTCAAAACTGCGAAGTTAA+CGG | 0.480117 | 1.1:+4371554 | MS.gene24455:CDS |
| CTTCCTCTTGACGACACACC+AGG | 0.485639 | 1.1:+4371353 | MS.gene24455:CDS |
| TATAGGCGTGACGGGAATTG+TGG | 0.488302 | 1.1:+4371310 | MS.gene24455:CDS |
| GATCTTACCGATCGTTTCGA+AGG | 0.490896 | 1.1:-4371672 | None:intergenic |
| TCTTAGAATTCCTAAATCCC+TGG | 0.490914 | 1.1:-4372680 | None:intergenic |
| ATATGTGTCACATCAGTTAA+GGG | 0.499720 | 1.1:-4371497 | None:intergenic |
| TCCTGGCTCAAAAGGTGCAT+GGG | 0.501130 | 1.1:+4372296 | MS.gene24455:CDS |
| TTGAAGAAGTTGGAGATTGG+TGG | 0.501232 | 1.1:+4372589 | MS.gene24455:CDS |
| GATTCAGAGTATTTGGGATG+AGG | 0.505727 | 1.1:-4371604 | None:intergenic |
| CGCCGCAATTTGCAAGCATG+AGG | 0.506185 | 1.1:+4372257 | MS.gene24455:CDS |
| ATAGGCGTGACGGGAATTGT+GGG | 0.523966 | 1.1:+4371311 | MS.gene24455:CDS |
| GCCACGCCATAAACCTTCCA+TGG | 0.524352 | 1.1:-4371380 | None:intergenic |
| CGTTCCATGTTGGTTGTGGA+CGG | 0.525270 | 1.1:-4371406 | None:intergenic |
| CAAGTGGAAACATTTGTGGA+AGG | 0.525790 | 1.1:+4372431 | MS.gene24455:CDS |
| GTGCTTAGTTCCTGTTTGAA+GGG | 0.526554 | 1.1:-4371639 | None:intergenic |
| CGAAACGATCGGTAAGATCA+AGG | 0.531559 | 1.1:+4371676 | MS.gene24455:CDS |
| ATGACGTTCATCATACTGTA+AGG | 0.531560 | 1.1:-4372216 | None:intergenic |
| CGTGGCACATCCTCCGTGAA+GGG | 0.534644 | 1.1:-4371710 | None:intergenic |
| ACGACACACCAGGTGGTCCA+TGG | 0.534646 | 1.1:+4371363 | MS.gene24455:CDS |
| ATTCAGAGTATTTGGGATGA+GGG | 0.534772 | 1.1:-4371603 | None:intergenic |
| TCTTGTGTGTAATAGAAATT+GGG | 0.536136 | 1.1:-4371743 | None:intergenic |
| TTCCTGTTTGAAGGGACACA+TGG | 0.546442 | 1.1:-4371631 | None:intergenic |
| TAAACCTTCCATGGACCACC+TGG | 0.546760 | 1.1:-4371371 | None:intergenic |
| GATGATTATGGATTTGAGGA+GGG | 0.546835 | 1.1:+4372477 | MS.gene24455:CDS |
| GAAGCCTTCAACTGCACCAA+TGG | 0.549227 | 1.1:+4372399 | MS.gene24455:CDS |
| CGATGATTATGGATTTGAGG+AGG | 0.550813 | 1.1:+4372476 | MS.gene24455:CDS |
| TTCCTGGCTCAAAAGGTGCA+TGG | 0.551639 | 1.1:+4372295 | MS.gene24455:CDS |
| TTATGGATTTGAGGAGGGGT+CGG | 0.555462 | 1.1:+4372482 | MS.gene24455:CDS |
| GCGTGGCACATCCTCCGTGA+AGG | 0.559630 | 1.1:-4371711 | None:intergenic |
| GCATTGATTATAGGCGTGAC+GGG | 0.559853 | 1.1:+4371302 | MS.gene24455:CDS |
| GAAGGATAAGGGTGGTGTGT+GGG | 0.559921 | 1.1:+4372527 | MS.gene24455:CDS |
| GAGGTTATCGGAGATGATGA+AGG | 0.563587 | 1.1:+4372509 | MS.gene24455:CDS |
| GTGTGTGGGAAGAGATTGTG+AGG | 0.564316 | 1.1:+4372541 | MS.gene24455:CDS |
| ATGAACAAAGCTAAGGAACA+TGG | 0.565654 | 1.1:+4372654 | MS.gene24455:CDS |
| TACTTATCAGCGTTCCATGT+TGG | 0.569046 | 1.1:-4371416 | None:intergenic |
| TGGCACATCCTCCGTGAAGG+GGG | 0.571299 | 1.1:-4371708 | None:intergenic |
| ACCCTCATGCTTGCAAATTG+CGG | 0.571724 | 1.1:-4372259 | None:intergenic |
| AAGGTGAAAATCCAAAGATA+GGG | 0.571865 | 1.1:-4372197 | None:intergenic |
| GCTAAGGAACATGGATTCCA+GGG | 0.579431 | 1.1:+4372663 | MS.gene24455:CDS |
| AGAGGATATCTTGTTAGAAG+AGG | 0.580425 | 1.1:+4371763 | MS.gene24455:CDS |
| TGTGGAAGGTGTTAGCAGAA+CGG | 0.582640 | 1.1:+4372445 | MS.gene24455:CDS |
| AGCATTGATTATAGGCGTGA+CGG | 0.590164 | 1.1:+4371301 | MS.gene24455:CDS |
| CTCGCCGTCCACAACCAACA+TGG | 0.591769 | 1.1:+4371402 | MS.gene24455:CDS |
| ACAACATATTTGGGGTGCAG+TGG | 0.593718 | 1.1:+4372359 | MS.gene24455:CDS |
| CAATTTCTATTACACACAAG+AGG | 0.594811 | 1.1:+4371745 | MS.gene24455:CDS |
| CCACCTGGTGTGTCGTCAAG+AGG | 0.596172 | 1.1:-4371356 | None:intergenic |
| CTAGGATCCTTCGAAACGAT+CGG | 0.596222 | 1.1:+4371665 | MS.gene24455:CDS |
| GGATTCTATGAACAAAGCTA+AGG | 0.603190 | 1.1:+4372647 | MS.gene24455:CDS |
| CAAGAGGAAGAATCTCTGCT+AGG | 0.603639 | 1.1:-4371340 | None:intergenic |
| TGCACAAGCACAAAAGAGAG+TGG | 0.607402 | 1.1:-4371236 | None:intergenic |
| ATAGCTGAACAACATATTTG+GGG | 0.609952 | 1.1:+4372351 | MS.gene24455:CDS |
| GAAAATCCAAAGATAGGGTG+TGG | 0.610721 | 1.1:-4372192 | None:intergenic |
| GTGGCACATCCTCCGTGAAG+GGG | 0.611842 | 1.1:-4371709 | None:intergenic |
| TATTTGGGATGAGGGCTCGA+AGG | 0.617902 | 1.1:-4371595 | None:intergenic |
| TGAAGGATAAGGGTGGTGTG+TGG | 0.621492 | 1.1:+4372526 | MS.gene24455:CDS |
| GCCGCAATTTGCAAGCATGA+GGG | 0.625863 | 1.1:+4372258 | MS.gene24455:CDS |
| ATGATTATGGATTTGAGGAG+GGG | 0.626346 | 1.1:+4372478 | MS.gene24455:CDS |
| CACACCAGGTGGTCCATGGA+AGG | 0.631164 | 1.1:+4371367 | MS.gene24455:CDS |
| GCACAAGCACAAAAGAGAGT+GGG | 0.636530 | 1.1:-4371235 | None:intergenic |
| AATAGAAATTGGGTGTGACA+AGG | 0.638766 | 1.1:-4371733 | None:intergenic |
| ACAGGAACTAAGCACTACCT+AGG | 0.639304 | 1.1:+4371647 | MS.gene24455:CDS |
| AAATTGGGTGTGACAAGGCG+TGG | 0.639832 | 1.1:-4371728 | None:intergenic |
| TCCATGGAAGGTTTATGGCG+TGG | 0.649148 | 1.1:+4371379 | MS.gene24455:CDS |
| CCTCTTGACGACACACCAGG+TGG | 0.689409 | 1.1:+4371356 | MS.gene24455:CDS |
| GAGATGATGAAGGATAAGGG+TGG | 0.738948 | 1.1:+4372519 | MS.gene24455:CDS |
| TGTGTGGGAAGAGATTGTGA+GGG | 0.742732 | 1.1:+4372542 | MS.gene24455:CDS |
| GTGGACCAGCATGCCCACAG+AGG | 0.748657 | 1.1:+4371532 | MS.gene24455:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCACATCTATTTTTTTTA+GGG | + | chr1.1:4372080-4372099 | MS.gene24455:intron | 15.0% |
| !! | AATGAACAATATATTTGTTC+AGG | + | chr1.1:4372131-4372150 | MS.gene24455:intron | 20.0% |
| !! | AGAAAATATAATTCCAAAGA+AGG | - | chr1.1:4371980-4371999 | None:intergenic | 20.0% |
| !! | TATATATTACTAACCTTCTT+TGG | + | chr1.1:4371964-4371983 | MS.gene24455:intron | 20.0% |
| !!! | GTTTCACATCTATTTTTTTT+AGG | + | chr1.1:4372079-4372098 | MS.gene24455:intron | 20.0% |
| !!! | TCAATTTGTTAAAAACATAG+TGG | - | chr1.1:4371941-4371960 | None:intergenic | 20.0% |
| !!! | TTCACATCTATTTTTTTTAG+GGG | + | chr1.1:4372081-4372100 | MS.gene24455:intron | 20.0% |
| ! | AACAATATATTTGTTCAGGT+GGG | + | chr1.1:4372135-4372154 | MS.gene24455:intron | 25.0% |
| ! | AATAGCTGAACAACATATTT+GGG | + | chr1.1:4372350-4372369 | MS.gene24455:CDS | 25.0% |
| ! | TAATAGCTGAACAACATATT+TGG | + | chr1.1:4372349-4372368 | MS.gene24455:CDS | 25.0% |
| ! | TCTTGTGTGTAATAGAAATT+GGG | - | chr1.1:4371746-4371765 | None:intergenic | 25.0% |
| !! | CTATAATCAATGCTACATTT+TGG | - | chr1.1:4371295-4371314 | None:intergenic | 25.0% |
| !! | GTTAAAAACATAGTGGAAAA+AGG | - | chr1.1:4371934-4371953 | None:intergenic | 25.0% |
| !!! | CAAAATGTAGCATTGATTAT+AGG | + | chr1.1:4371293-4371312 | MS.gene24455:CDS | 25.0% |
| AAGGTGAAAATCCAAAGATA+GGG | - | chr1.1:4372200-4372219 | None:intergenic | 30.0% | |
| AAGTTAACGGTTCAATGTTA+AGG | + | chr1.1:4371567-4371586 | MS.gene24455:CDS | 30.0% | |
| AATATGTGTCACATCAGTTA+AGG | - | chr1.1:4371501-4371520 | None:intergenic | 30.0% | |
| ATAGCTGAACAACATATTTG+GGG | + | chr1.1:4372351-4372370 | MS.gene24455:CDS | 30.0% | |
| ATATGTGTCACATCAGTTAA+GGG | - | chr1.1:4371500-4371519 | None:intergenic | 30.0% | |
| CAATTTCTATTACACACAAG+AGG | + | chr1.1:4371745-4371764 | MS.gene24455:CDS | 30.0% | |
| CTAAGAATTCGTTCATTAGT+TGG | + | chr1.1:4372697-4372716 | MS.gene24455:CDS | 30.0% | |
| CTCTTGTGTGTAATAGAAAT+TGG | - | chr1.1:4371747-4371766 | None:intergenic | 30.0% | |
| GAACAATATATTTGTTCAGG+TGG | + | chr1.1:4372134-4372153 | MS.gene24455:intron | 30.0% | |
| TAAGGTGAAAATCCAAAGAT+AGG | - | chr1.1:4372201-4372220 | None:intergenic | 30.0% | |
| !!! | TTTTCAAGTGGAAACATTTG+TGG | + | chr1.1:4372427-4372446 | MS.gene24455:CDS | 30.0% |
| AAGGCTTCATTCTTTGCATT+AGG | - | chr1.1:4372387-4372406 | None:intergenic | 35.0% | |
| AATAGAAATTGGGTGTGACA+AGG | - | chr1.1:4371736-4371755 | None:intergenic | 35.0% | |
| AGAGGATATCTTGTTAGAAG+AGG | + | chr1.1:4371763-4371782 | MS.gene24455:CDS | 35.0% | |
| ATGAACAAAGCTAAGGAACA+TGG | + | chr1.1:4372654-4372673 | MS.gene24455:CDS | 35.0% | |
| ATGACGTTCATCATACTGTA+AGG | - | chr1.1:4372219-4372238 | None:intergenic | 35.0% | |
| ATGATTATGGATTTGAGGAG+GGG | + | chr1.1:4372478-4372497 | MS.gene24455:CDS | 35.0% | |
| GATATCTTGTTAGAAGAGGT+TGG | + | chr1.1:4371767-4371786 | MS.gene24455:intron | 35.0% | |
| GATCGATGATTATGGATTTG+AGG | + | chr1.1:4372473-4372492 | MS.gene24455:CDS | 35.0% | |
| GATGATTATGGATTTGAGGA+GGG | + | chr1.1:4372477-4372496 | MS.gene24455:CDS | 35.0% | |
| GGATTCTATGAACAAAGCTA+AGG | + | chr1.1:4372647-4372666 | MS.gene24455:CDS | 35.0% | |
| GTAAGAAAAAAGGAACGACA+TGG | + | chr1.1:4372157-4372176 | MS.gene24455:CDS | 35.0% | |
| TACAGTATGATGAACGTCAT+TGG | + | chr1.1:4372219-4372238 | MS.gene24455:CDS | 35.0% | |
| TCTTAGAATTCCTAAATCCC+TGG | - | chr1.1:4372683-4372702 | None:intergenic | 35.0% | |
| TGTGCAGATTACAGAATTCA+AGG | + | chr1.1:4371253-4371272 | MS.gene24455:CDS | 35.0% | |
| ! | ATTCAGAGTATTTGGGATGA+GGG | - | chr1.1:4371606-4371625 | None:intergenic | 35.0% |
| ! | CACATATTTTCTATGTCTCG+TGG | + | chr1.1:4371513-4371532 | MS.gene24455:CDS | 35.0% |
| ! | GGCAAAGATTCAGAGTATTT+GGG | - | chr1.1:4371613-4371632 | None:intergenic | 35.0% |
| ! | TGGCAAAGATTCAGAGTATT+TGG | - | chr1.1:4371614-4371633 | None:intergenic | 35.0% |
| !!! | AGATTTTAGTTTGAGACTGG+AGG | + | chr1.1:4372617-4372636 | MS.gene24455:CDS | 35.0% |
| !!! | GATTTTAGTTTGAGACTGGA+GGG | + | chr1.1:4372618-4372637 | MS.gene24455:CDS | 35.0% |
| !!! | TGCAGATTTTAGTTTGAGAC+TGG | + | chr1.1:4372614-4372633 | MS.gene24455:CDS | 35.0% |
| AACATGGATTCCAGGGATTT+AGG | + | chr1.1:4372670-4372689 | MS.gene24455:CDS | 40.0% | |
| AGCTTGAAGAAGTTGGAGAT+TGG | + | chr1.1:4372586-4372605 | MS.gene24455:CDS | 40.0% | |
| AGTGCTTAGTTCCTGTTTGA+AGG | - | chr1.1:4371643-4371662 | None:intergenic | 40.0% | |
| ATCGGAGATGATGAAGGATA+AGG | + | chr1.1:4372515-4372534 | MS.gene24455:CDS | 40.0% | |
| ATCTCCAACTTCTTCAAGCT+TGG | - | chr1.1:4372586-4372605 | None:intergenic | 40.0% | |
| CAAGTGGAAACATTTGTGGA+AGG | + | chr1.1:4372431-4372450 | MS.gene24455:CDS | 40.0% | |
| CGATGATTATGGATTTGAGG+AGG | + | chr1.1:4372476-4372495 | MS.gene24455:CDS | 40.0% | |
| GAAAATCCAAAGATAGGGTG+TGG | - | chr1.1:4372195-4372214 | None:intergenic | 40.0% | |
| GCTCAAAACTGCGAAGTTAA+CGG | + | chr1.1:4371554-4371573 | MS.gene24455:CDS | 40.0% | |
| GTGCTTAGTTCCTGTTTGAA+GGG | - | chr1.1:4371642-4371661 | None:intergenic | 40.0% | |
| GTTCAGGTGGGTAAGAAAAA+AGG | + | chr1.1:4372147-4372166 | MS.gene24455:intron | 40.0% | |
| TACTTATCAGCGTTCCATGT+TGG | - | chr1.1:4371419-4371438 | None:intergenic | 40.0% | |
| TCGGAGATGATGAAGGATAA+GGG | + | chr1.1:4372516-4372535 | MS.gene24455:CDS | 40.0% | |
| TTAAGGTTTCCTGGCTCAAA+AGG | + | chr1.1:4372288-4372307 | MS.gene24455:CDS | 40.0% | |
| TTGAAGAAGTTGGAGATTGG+TGG | + | chr1.1:4372589-4372608 | MS.gene24455:CDS | 40.0% | |
| TTTGAGCCAGGAAACCTTAA+AGG | - | chr1.1:4372288-4372307 | None:intergenic | 40.0% | |
| ! | CGGTTTGAGATCGATGATTA+TGG | + | chr1.1:4372465-4372484 | MS.gene24455:CDS | 40.0% |
| ! | GATTCAGAGTATTTGGGATG+AGG | - | chr1.1:4371607-4371626 | None:intergenic | 40.0% |
| ! | GCTTCAATTCGACGTCTTTT+TGG | - | chr1.1:4371472-4371491 | None:intergenic | 40.0% |
| !! | AGCATTGATTATAGGCGTGA+CGG | + | chr1.1:4371301-4371320 | MS.gene24455:CDS | 40.0% |
| AATCGACCACACCCTATCTT+TGG | + | chr1.1:4372186-4372205 | MS.gene24455:CDS | 45.0% | |
| ACAGGAACTAAGCACTACCT+AGG | + | chr1.1:4371647-4371666 | MS.gene24455:CDS | 45.0% | |
| ACCCTCATGCTTGCAAATTG+CGG | - | chr1.1:4372262-4372281 | None:intergenic | 45.0% | |
| AGCATGAGGGTCTTCCTTTA+AGG | + | chr1.1:4372271-4372290 | MS.gene24455:CDS | 45.0% | |
| AGCTAAGGAACATGGATTCC+AGG | + | chr1.1:4372662-4372681 | MS.gene24455:CDS | 45.0% | |
| CAAGAGGAAGAATCTCTGCT+AGG | - | chr1.1:4371343-4371362 | None:intergenic | 45.0% | |
| CACACCAAGCTTGAAGAAGT+TGG | + | chr1.1:4372579-4372598 | MS.gene24455:CDS | 45.0% | |
| CCACTTGAAAACATCGCCAT+TGG | - | chr1.1:4372418-4372437 | None:intergenic | 45.0% | |
| CGAAACGATCGGTAAGATCA+AGG | + | chr1.1:4371676-4371695 | MS.gene24455:CDS | 45.0% | |
| CTAGGATCCTTCGAAACGAT+CGG | + | chr1.1:4371665-4371684 | MS.gene24455:CDS | 45.0% | |
| GAGATGATGAAGGATAAGGG+TGG | + | chr1.1:4372519-4372538 | MS.gene24455:CDS | 45.0% | |
| GAGGTTATCGGAGATGATGA+AGG | + | chr1.1:4372509-4372528 | MS.gene24455:CDS | 45.0% | |
| GATCTTACCGATCGTTTCGA+AGG | - | chr1.1:4371675-4371694 | None:intergenic | 45.0% | |
| GCACAAGCACAAAAGAGAGT+GGG | - | chr1.1:4371238-4371257 | None:intergenic | 45.0% | |
| GCTAAGGAACATGGATTCCA+GGG | + | chr1.1:4372663-4372682 | MS.gene24455:CDS | 45.0% | |
| TGCACAAGCACAAAAGAGAG+TGG | - | chr1.1:4371239-4371258 | None:intergenic | 45.0% | |
| TGTGTGGGAAGAGATTGTGA+GGG | + | chr1.1:4372542-4372561 | MS.gene24455:CDS | 45.0% | |
| TTATGGATTTGAGGAGGGGT+CGG | + | chr1.1:4372482-4372501 | MS.gene24455:CDS | 45.0% | |
| TTCCTGTTTGAAGGGACACA+TGG | - | chr1.1:4371634-4371653 | None:intergenic | 45.0% | |
| ! | ACAACATATTTGGGGTGCAG+TGG | + | chr1.1:4372359-4372378 | MS.gene24455:CDS | 45.0% |
| !! | CCAATGGCGATGTTTTCAAG+TGG | + | chr1.1:4372415-4372434 | MS.gene24455:CDS | 45.0% |
| !! | GCATTGATTATAGGCGTGAC+GGG | + | chr1.1:4371302-4371321 | MS.gene24455:CDS | 45.0% |
| !! | GCTACATTTTGGAAGCTTCG+TGG | - | chr1.1:4371284-4371303 | None:intergenic | 45.0% |
| !! | GGTCTTCCTTTAAGGTTTCC+TGG | + | chr1.1:4372279-4372298 | MS.gene24455:CDS | 45.0% |
| !! | TGTGGAAGGTGTTAGCAGAA+CGG | + | chr1.1:4372445-4372464 | MS.gene24455:CDS | 45.0% |
| AAATTGGGTGTGACAAGGCG+TGG | - | chr1.1:4371731-4371750 | None:intergenic | 50.0% | |
| ATCGCCATTGGTGCAGTTGA+AGG | - | chr1.1:4372406-4372425 | None:intergenic | 50.0% | |
| CGATCGTTTCGAAGGATCCT+AGG | - | chr1.1:4371667-4371686 | None:intergenic | 50.0% | |
| GAAGCCTTCAACTGCACCAA+TGG | + | chr1.1:4372399-4372418 | MS.gene24455:CDS | 50.0% | |
| GAAGGATAAGGGTGGTGTGT+GGG | + | chr1.1:4372527-4372546 | MS.gene24455:CDS | 50.0% | |
| GCCGCAATTTGCAAGCATGA+GGG | + | chr1.1:4372258-4372277 | MS.gene24455:CDS | 50.0% | |
| GGTGGTCCATGGAAGGTTTA+TGG | + | chr1.1:4371374-4371393 | MS.gene24455:CDS | 50.0% | |
| GTGTGTGGGAAGAGATTGTG+AGG | + | chr1.1:4372541-4372560 | MS.gene24455:CDS | 50.0% | |
| TAAACCTTCCATGGACCACC+TGG | - | chr1.1:4371374-4371393 | None:intergenic | 50.0% | |
| TCCATGGAAGGTTTATGGCG+TGG | + | chr1.1:4371379-4371398 | MS.gene24455:CDS | 50.0% | |
| TGAAGGATAAGGGTGGTGTG+TGG | + | chr1.1:4372526-4372545 | MS.gene24455:CDS | 50.0% | |
| TGCCATGTGTCCCTTCAAAC+AGG | + | chr1.1:4371629-4371648 | MS.gene24455:CDS | 50.0% | |
| ! | ATAGGCGTGACGGGAATTGT+GGG | + | chr1.1:4371311-4371330 | MS.gene24455:CDS | 50.0% |
| ! | CGTTCCATGTTGGTTGTGGA+CGG | - | chr1.1:4371409-4371428 | None:intergenic | 50.0% |
| ! | TATAGGCGTGACGGGAATTG+TGG | + | chr1.1:4371310-4371329 | MS.gene24455:CDS | 50.0% |
| ! | TATTTGGGATGAGGGCTCGA+AGG | - | chr1.1:4371598-4371617 | None:intergenic | 50.0% |
| ! | TCAGCGTTCCATGTTGGTTG+TGG | - | chr1.1:4371413-4371432 | None:intergenic | 50.0% |
| ! | TCCTGGCTCAAAAGGTGCAT+GGG | + | chr1.1:4372296-4372315 | MS.gene24455:CDS | 50.0% |
| ! | TTCCTGGCTCAAAAGGTGCA+TGG | + | chr1.1:4372295-4372314 | MS.gene24455:CDS | 50.0% |
| ! | TTTGAGACTGGAGGGTGTGT+TGG | + | chr1.1:4372626-4372645 | MS.gene24455:CDS | 50.0% |
| !!! | TCGCAGTTTTGAGCCTCTGT+GGG | - | chr1.1:4371548-4371567 | None:intergenic | 50.0% |
| !!! | TTCGCAGTTTTGAGCCTCTG+TGG | - | chr1.1:4371549-4371568 | None:intergenic | 50.0% |
| CGCCGCAATTTGCAAGCATG+AGG | + | chr1.1:4372257-4372276 | MS.gene24455:CDS | 55.0% | |
| CTTCCTCTTGACGACACACC+AGG | + | chr1.1:4371353-4371372 | MS.gene24455:CDS | 55.0% | |
| GCCACGCCATAAACCTTCCA+TGG | - | chr1.1:4371383-4371402 | None:intergenic | 55.0% | |
| GGGGTCGGAGTTGAGGTTAT+CGG | + | chr1.1:4372497-4372516 | MS.gene24455:CDS | 55.0% | |
| ! | TCCCATGCACCTTTTGAGCC+AGG | - | chr1.1:4372300-4372319 | None:intergenic | 55.0% |
| ACGACACACCAGGTGGTCCA+TGG | + | chr1.1:4371363-4371382 | MS.gene24455:CDS | 60.0% | |
| CACACCAGGTGGTCCATGGA+AGG | + | chr1.1:4371367-4371386 | MS.gene24455:CDS | 60.0% | |
| CCACCTGGTGTGTCGTCAAG+AGG | - | chr1.1:4371359-4371378 | None:intergenic | 60.0% | |
| CCTCTTGACGACACACCAGG+TGG | + | chr1.1:4371356-4371375 | MS.gene24455:CDS | 60.0% | |
| CGTGGCACATCCTCCGTGAA+GGG | - | chr1.1:4371713-4371732 | None:intergenic | 60.0% | |
| CTCCGTGAAGGGGGACTCAT+GGG | - | chr1.1:4371702-4371721 | None:intergenic | 60.0% | |
| CTCGCCGTCCACAACCAACA+TGG | + | chr1.1:4371402-4371421 | MS.gene24455:CDS | 60.0% | |
| GTGGCACATCCTCCGTGAAG+GGG | - | chr1.1:4371712-4371731 | None:intergenic | 60.0% | |
| TGGCACATCCTCCGTGAAGG+GGG | - | chr1.1:4371711-4371730 | None:intergenic | 60.0% | |
| TTGAGCCTCTGTGGGCATGC+TGG | - | chr1.1:4371540-4371559 | None:intergenic | 60.0% | |
| TTGAGGAGGGGTCGGAGTTG+AGG | + | chr1.1:4372490-4372509 | MS.gene24455:CDS | 60.0% | |
| CCATGAGTCCCCCTTCACGG+AGG | + | chr1.1:4371700-4371719 | MS.gene24455:CDS | 65.0% | |
| CCTCCGTGAAGGGGGACTCA+TGG | - | chr1.1:4371703-4371722 | None:intergenic | 65.0% | |
| GCGTGGCACATCCTCCGTGA+AGG | - | chr1.1:4371714-4371733 | None:intergenic | 65.0% | |
| GGCCCATGAGTCCCCCTTCA+CGG | + | chr1.1:4371697-4371716 | MS.gene24455:CDS | 65.0% | |
| GTGGACCAGCATGCCCACAG+AGG | + | chr1.1:4371532-4371551 | MS.gene24455:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 4371224 | 4372755 | 4371224 | ID=MS.gene24455 |
| chr1.1 | mRNA | 4371224 | 4372755 | 4371224 | ID=MS.gene24455.t1;Parent=MS.gene24455 |
| chr1.1 | exon | 4371224 | 4371784 | 4371224 | ID=MS.gene24455.t1.exon1;Parent=MS.gene24455.t1 |
| chr1.1 | CDS | 4371224 | 4371784 | 4371224 | ID=cds.MS.gene24455.t1;Parent=MS.gene24455.t1 |
| chr1.1 | exon | 4372153 | 4372755 | 4372153 | ID=MS.gene24455.t1.exon2;Parent=MS.gene24455.t1 |
| chr1.1 | CDS | 4372153 | 4372755 | 4372153 | ID=cds.MS.gene24455.t1;Parent=MS.gene24455.t1 |
| Gene Sequence |
| Protein sequence |
