Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95570.t1 | XP_013455667.1 | 98.2 | 448 | 8 | 0 | 1 | 448 | 1 | 448 | 6.40E-237 | 829.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95570.t1 | O80885 | 69.9 | 452 | 127 | 4 | 1 | 448 | 1 | 447 | 1.6e-164 | 580.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95570.t1 | A0A072UKS9 | 98.2 | 448 | 8 | 0 | 1 | 448 | 1 | 448 | 4.6e-237 | 829.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene95570 | 0.824894 | 6.30E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene95570 | 0.823294 | 1.50E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene95570 | 0.817931 | 2.55E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene95570 | 0.879416 | 1.27E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene95570 | 0.863932 | 1.75E-64 | -1.69E-46 |
| MS.gene049396 | MS.gene95570 | 0.804217 | 2.40E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene95570 | 0.857389 | 1.69E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene95570 | 0.814855 | 1.25E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene95570 | 0.822967 | 1.78E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene95570 | 0.830913 | 2.25E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene95570 | 0.830288 | 3.19E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene95570 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene95570 | 0.860307 | 2.26E-63 | -1.69E-46 |
| MS.gene050076 | MS.gene95570 | 0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene95570 | 0.854827 | 9.50E-62 | -1.69E-46 |
| MS.gene050432 | MS.gene95570 | 0.834293 | 3.26E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene95570 | 0.821887 | 3.18E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene95570 | 0.863045 | 3.29E-64 | -1.69E-46 |
| MS.gene050670 | MS.gene95570 | 0.908053 | 2.60E-81 | -1.69E-46 |
| MS.gene050747 | MS.gene95570 | 0.842434 | 2.59E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene95570 | 0.819026 | 1.44E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene95570 | 0.822626 | 2.14E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene95570 | 0.836869 | 7.27E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene95570 | 0.800343 | 1.51E-48 | -1.69E-46 |
| MS.gene050812 | MS.gene95570 | 0.8406 | 7.89E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene95570 | 0.835509 | 1.61E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene95570 | 0.823921 | 1.07E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene95570 | 0.870599 | 1.29E-66 | -1.69E-46 |
| MS.gene051228 | MS.gene95570 | 0.83051 | 2.82E-55 | -1.69E-46 |
| MS.gene051360 | MS.gene95570 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene95570 | 0.882551 | 9.47E-71 | -1.69E-46 |
| MS.gene051471 | MS.gene95570 | 0.818196 | 2.22E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene95570 | 0.835446 | 1.67E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene95570 | 0.874115 | 8.69E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene95570 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene95570 | 0.800657 | 1.30E-48 | -1.69E-46 |
| MS.gene051858 | MS.gene95570 | 0.81235 | 4.43E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene95570 | 0.807899 | 4.03E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene95570 | 0.814421 | 1.55E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene95570 | 0.901472 | 2.59E-78 | -1.69E-46 |
| MS.gene052253 | MS.gene95570 | 0.828431 | 9.02E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene95570 | 0.845403 | 4.15E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene95570 | 0.886541 | 3.13E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene95570 | 0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene95570 | 0.818952 | 1.50E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene95570 | 0.860216 | 2.41E-63 | -1.69E-46 |
| MS.gene052379 | MS.gene95570 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene95570 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene95570 | 0.87928 | 1.42E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene95570 | 0.813781 | 2.15E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene95570 | 0.840836 | 6.84E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene95570 | 0.860193 | 2.45E-63 | -1.69E-46 |
| MS.gene052501 | MS.gene95570 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene95570 | 0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene95570 | 0.820568 | 6.40E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene95570 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene95570 | 0.838865 | 2.23E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene95570 | 0.87789 | 4.37E-69 | -1.69E-46 |
| MS.gene053104 | MS.gene95570 | 0.859494 | 3.98E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene95570 | 0.807916 | 4.00E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene95570 | 0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene95570 | 0.832464 | 9.31E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene95570 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene95570 | 0.852244 | 5.24E-61 | -1.69E-46 |
| MS.gene053384 | MS.gene95570 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene95570 | 0.834012 | 3.83E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene95570 | 0.816573 | 5.16E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene95570 | 0.831926 | 1.27E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene95570 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene95570 | 0.812082 | 5.07E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene95570 | 0.829095 | 6.23E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene95570 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene95570 | 0.85828 | 9.18E-63 | -1.69E-46 |
| MS.gene053916 | MS.gene95570 | 0.844785 | 6.10E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene95570 | 0.879865 | 8.79E-70 | -1.69E-46 |
| MS.gene054376 | MS.gene95570 | 0.815449 | 9.19E-52 | -1.69E-46 |
| MS.gene054543 | MS.gene95570 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene95570 | 0.806226 | 9.12E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene95570 | 0.802232 | 6.19E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene95570 | 0.802264 | 6.09E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene95570 | 0.843399 | 1.44E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene95570 | 0.88416 | 2.43E-71 | -1.69E-46 |
| MS.gene055116 | MS.gene95570 | 0.86445 | 1.21E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene95570 | 0.830143 | 3.47E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene95570 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene95570 | 0.821049 | 4.96E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene95570 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene95570 | 0.814074 | 1.85E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene95570 | 0.845625 | 3.61E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene95570 | 0.820589 | 6.33E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene95570 | 0.809482 | 1.85E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene95570 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene95570 | 0.814152 | 1.78E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene95570 | 0.833211 | 6.07E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene95570 | 0.806902 | 6.56E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene95570 | 0.81027 | 1.25E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene95570 | 0.876214 | 1.67E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene95570 | 0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene95570 | 0.802274 | 6.06E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene95570 | 0.874826 | 4.99E-68 | -1.69E-46 |
| MS.gene056410 | MS.gene95570 | 0.824648 | 7.20E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene95570 | 0.841971 | 3.44E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene95570 | 0.804948 | 1.69E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene95570 | 0.896416 | 3.77E-76 | -1.69E-46 |
| MS.gene056609 | MS.gene95570 | 0.849005 | 4.27E-60 | -1.69E-46 |
| MS.gene05664 | MS.gene95570 | 0.83212 | 1.13E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene95570 | 0.825148 | 5.49E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene95570 | 0.825072 | 5.72E-54 | -1.69E-46 |
| MS.gene056719 | MS.gene95570 | 0.849415 | 3.28E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene95570 | 0.847088 | 1.44E-59 | -1.69E-46 |
| MS.gene057011 | MS.gene95570 | 0.858196 | 9.72E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene95570 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene95570 | 0.829295 | 5.58E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene95570 | 0.847229 | 1.32E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene95570 | 0.842647 | 2.28E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene95570 | 0.852279 | 5.12E-61 | -1.69E-46 |
| MS.gene057146 | MS.gene95570 | 0.886669 | 2.80E-72 | -1.69E-46 |
| MS.gene057285 | MS.gene95570 | 0.816504 | 5.35E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene95570 | 0.83375 | 4.46E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene95570 | 0.868029 | 8.85E-66 | -1.69E-46 |
| MS.gene057416 | MS.gene95570 | 0.865127 | 7.40E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene95570 | 0.844684 | 6.49E-59 | -1.69E-46 |
| MS.gene057449 | MS.gene95570 | 0.843169 | 1.65E-58 | -1.69E-46 |
| MS.gene057450 | MS.gene95570 | 0.853053 | 3.08E-61 | -1.69E-46 |
| MS.gene057537 | MS.gene95570 | 0.825801 | 3.85E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene95570 | 0.859877 | 3.05E-63 | -1.69E-46 |
| MS.gene057749 | MS.gene95570 | 0.81375 | 2.19E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene95570 | 0.824251 | 8.93E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene95570 | 0.821178 | 4.64E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene95570 | 0.828588 | 8.27E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene95570 | 0.83094 | 2.21E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene95570 | 0.810052 | 1.40E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene95570 | 0.827273 | 1.71E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene95570 | 0.845114 | 4.97E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene95570 | 0.829536 | 4.87E-55 | -1.69E-46 |
| MS.gene058075 | MS.gene95570 | 0.820746 | 5.83E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene95570 | 0.860195 | 2.45E-63 | -1.69E-46 |
| MS.gene05811 | MS.gene95570 | 0.810412 | 1.17E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene95570 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene95570 | 0.810011 | 1.43E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene95570 | 0.86194 | 7.20E-64 | -1.69E-46 |
| MS.gene058323 | MS.gene95570 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene95570 | 0.858943 | 5.82E-63 | -1.69E-46 |
| MS.gene058376 | MS.gene95570 | 0.816846 | 4.48E-52 | -1.69E-46 |
| MS.gene058459 | MS.gene95570 | 0.820321 | 7.30E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene95570 | 0.874289 | 7.59E-68 | -1.69E-46 |
| MS.gene058700 | MS.gene95570 | 0.84517 | 4.80E-59 | -1.69E-46 |
| MS.gene058787 | MS.gene95570 | 0.82761 | 1.42E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene95570 | 0.846789 | 1.74E-59 | -1.69E-46 |
| MS.gene058948 | MS.gene95570 | 0.806076 | 9.81E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene95570 | 0.855108 | 7.87E-62 | -1.69E-46 |
| MS.gene05934 | MS.gene95570 | 0.844632 | 6.70E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene95570 | 0.849628 | 2.86E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene95570 | 0.802065 | 6.69E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene95570 | 0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene95570 | 0.805448 | 1.33E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene95570 | 0.851331 | 9.52E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene95570 | 0.8644 | 1.25E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene95570 | 0.876358 | 1.49E-68 | -1.69E-46 |
| MS.gene059676 | MS.gene95570 | 0.893594 | 5.43E-75 | -1.69E-46 |
| MS.gene059688 | MS.gene95570 | 0.902505 | 9.05E-79 | -1.69E-46 |
| MS.gene059692 | MS.gene95570 | 0.889253 | 2.86E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene95570 | 0.89125 | 4.72E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene95570 | 0.825998 | 3.45E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene95570 | 0.862127 | 6.31E-64 | -1.69E-46 |
| MS.gene059807 | MS.gene95570 | 0.853725 | 1.98E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene95570 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene05986 | MS.gene95570 | 0.822215 | 2.67E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene95570 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene95570 | 0.805212 | 1.49E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene95570 | 0.862075 | 6.55E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene95570 | 0.859302 | 4.54E-63 | -1.69E-46 |
| MS.gene060407 | MS.gene95570 | 0.800045 | 1.73E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene95570 | 0.889801 | 1.75E-73 | -1.69E-46 |
| MS.gene060818 | MS.gene95570 | 0.874966 | 4.46E-68 | -1.69E-46 |
| MS.gene060835 | MS.gene95570 | 0.824721 | 6.92E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene95570 | 0.872163 | 3.93E-67 | -1.69E-46 |
| MS.gene06090 | MS.gene95570 | 0.808561 | 2.92E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene95570 | 0.826111 | 3.25E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene95570 | 0.878228 | 3.33E-69 | -1.69E-46 |
| MS.gene061049 | MS.gene95570 | 0.82536 | 4.89E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene95570 | -0.87347 | 1.43E-67 | -1.69E-46 |
| MS.gene061154 | MS.gene95570 | 0.826999 | 1.99E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene95570 | 0.86094 | 1.45E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027393 | MS.gene95570 | PPI |
| MS.gene61575 | MS.gene95570 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95570.t1 | MTR_4g048590 | 98.214 | 448 | 8 | 0 | 1 | 448 | 1 | 448 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95570.t1 | AT2G32480 | 69.912 | 452 | 127 | 4 | 1 | 448 | 1 | 447 | 0.0 | 609 |
| MS.gene95570.t1 | AT1G05140 | 68.750 | 448 | 133 | 4 | 1 | 448 | 1 | 441 | 0.0 | 580 |
| MS.gene95570.t1 | AT2G32480 | 64.823 | 452 | 113 | 6 | 1 | 448 | 1 | 410 | 0.0 | 538 |
Find 102 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAGCAAAACATATTTCTT+AGG | 0.150211 | 4.3:-50402292 | None:intergenic |
| TTTGATGGAACTGGTAAAAT+TGG | 0.151233 | 4.3:+50402367 | MS.gene95570:CDS |
| ACCTTAGACAACTTGATATT+TGG | 0.152211 | 4.3:-50402403 | None:intergenic |
| GCATTAAACTTCGCTAAAAT+TGG | 0.172232 | 4.3:-50401884 | None:intergenic |
| CATCCGGTGTTACCCTAATT+TGG | 0.172313 | 4.3:-50402339 | None:intergenic |
| CAGACAGCTAGTAAGGTTTC+AGG | 0.219254 | 4.3:+50402532 | MS.gene95570:CDS |
| TTTCCTCTTGGTGGGTTTGT+AGG | 0.241165 | 4.3:+50401935 | MS.gene95570:CDS |
| GCAATTGGTGGATTTGATTA+TGG | 0.246708 | 4.3:+50401725 | MS.gene95570:CDS |
| TCGCGCGATGGATTGCTTTC+GGG | 0.249872 | 4.3:+50402181 | MS.gene95570:CDS |
| TTCGCGCGATGGATTGCTTT+CGG | 0.265580 | 4.3:+50402180 | MS.gene95570:CDS |
| GGGGACAAGACTTCCAAATT+AGG | 0.265672 | 4.3:+50402326 | MS.gene95570:CDS |
| CCTTTACTGCGAAAGAGTTT+TGG | 0.270072 | 4.3:+50402455 | MS.gene95570:CDS |
| CCTTCTACCTTTACCGGCTT+TGG | 0.274478 | 4.3:+50402657 | MS.gene95570:CDS |
| TATAAACCTTCTACCTTTAC+CGG | 0.276636 | 4.3:+50402651 | MS.gene95570:CDS |
| TTTCTTGCTGCTTCTCTTCA+AGG | 0.306687 | 4.3:+50401827 | MS.gene95570:CDS |
| TGAAATGGGTCTCTTTGAAT+TGG | 0.322596 | 4.3:-50401564 | None:intergenic |
| AGATAGGATTATTGTGGTTT+CGG | 0.324636 | 4.3:+50402030 | MS.gene95570:CDS |
| CCTGTTCAAGAAATATTTCC+TGG | 0.325847 | 4.3:+50402121 | MS.gene95570:CDS |
| ACAATAATCCTATCTAATAT+TGG | 0.336997 | 4.3:-50402022 | None:intergenic |
| TCCAAATATCAAGTTGTCTA+AGG | 0.338190 | 4.3:+50402402 | MS.gene95570:CDS |
| CGCAAGGTTAATATTGAGTA+TGG | 0.345706 | 4.3:-50402626 | None:intergenic |
| TGGAAATCAGTTTCTTAAAC+CGG | 0.349138 | 4.3:+50402225 | MS.gene95570:CDS |
| TCACTATCTGGATCATTATC+AGG | 0.350050 | 4.3:-50401962 | None:intergenic |
| AGTAAATTTGCTGTTGGGTT+TGG | 0.354648 | 4.3:+50401860 | MS.gene95570:CDS |
| TTTGCATAGTAAAAGAAATA+GGG | 0.356049 | 4.3:+50401682 | MS.gene95570:CDS |
| GGTGGTGAGTTTCACGTTAG+AGG | 0.363274 | 4.3:-50401648 | None:intergenic |
| AGCAAATTTACATCATCAAC+AGG | 0.372749 | 4.3:-50401989 | None:intergenic |
| TCGCGCGAAGCAGCCGAAAA+AGG | 0.379964 | 4.3:-50402166 | None:intergenic |
| AGAATAGGCCAATATTAGAT+AGG | 0.388666 | 4.3:+50402014 | MS.gene95570:CDS |
| TAAGAGTGTCGCGAATAATA+AGG | 0.389029 | 4.3:-50402801 | None:intergenic |
| CCAGGAAATATTTCTTGAAC+AGG | 0.391939 | 4.3:-50402121 | None:intergenic |
| TTCCTCTTGGTGGGTTTGTA+GGG | 0.392433 | 4.3:+50401936 | MS.gene95570:CDS |
| TATTGAGTATGGCTGCAAAT+TGG | 0.395444 | 4.3:-50402615 | None:intergenic |
| TCAACAGGAATATCACTATC+TGG | 0.396061 | 4.3:-50401974 | None:intergenic |
| TTTGATTATGGAAGCTTTGA+AGG | 0.401275 | 4.3:+50401737 | MS.gene95570:CDS |
| GATGTGATTCTTGAAGTTAA+TGG | 0.408634 | 4.3:+50402205 | MS.gene95570:CDS |
| ACCAAGAGGAAAAGCTCTAA+TGG | 0.408745 | 4.3:-50401924 | None:intergenic |
| ATGTAAATTTGCTTAAGAAT+AGG | 0.411294 | 4.3:+50401999 | MS.gene95570:CDS |
| TGATTCTCGTTGAGGCTGCT+AGG | 0.412953 | 4.3:+50402698 | MS.gene95570:CDS |
| GTGGAGTGTGAGGGTGGAGA+AGG | 0.413285 | 4.3:-50401524 | None:intergenic |
| ATCATTGTTGTTCATGAAAG+TGG | 0.414510 | 4.3:+50401800 | MS.gene95570:CDS |
| TAAGCAAAACATATTTCTTA+GGG | 0.418908 | 4.3:-50402291 | None:intergenic |
| CGCGCGATGGATTGCTTTCG+GGG | 0.423435 | 4.3:+50402182 | MS.gene95570:CDS |
| GCTTAAGGAAGAATCTGAAA+TGG | 0.426413 | 4.3:-50401579 | None:intergenic |
| CCAAAGCCGGTAAAGGTAGA+AGG | 0.427153 | 4.3:-50402657 | None:intergenic |
| TTTAGGACATGTAGAGCAAT+TGG | 0.435369 | 4.3:+50401710 | MS.gene95570:CDS |
| GATTCTCGTTGAGGCTGCTA+GGG | 0.444886 | 4.3:+50402699 | MS.gene95570:CDS |
| TTCTTGCTGCTTCTCTTCAA+GGG | 0.445013 | 4.3:+50401828 | MS.gene95570:CDS |
| CTTAAGGAAGAATCTGAAAT+GGG | 0.469198 | 4.3:-50401578 | None:intergenic |
| CCTCCATCCAAAGCCGGTAA+AGG | 0.483700 | 4.3:-50402664 | None:intergenic |
| CCAAAACTCTTTCGCAGTAA+AGG | 0.485882 | 4.3:-50402455 | None:intergenic |
| ATATCAAGTTGTCTAAGGTT+AGG | 0.485892 | 4.3:+50402407 | MS.gene95570:CDS |
| TTTGTTCAAATCCTTGCTGT+TGG | 0.489719 | 4.3:+50402094 | MS.gene95570:CDS |
| CTACCTTTACCGGCTTTGGA+TGG | 0.492658 | 4.3:+50402661 | MS.gene95570:CDS |
| GTTGCGCGGTCGAACATTGA+TGG | 0.493485 | 4.3:+50402586 | MS.gene95570:CDS |
| CTCGTTGAGGCTGCTAGGGG+CGG | 0.494547 | 4.3:+50402703 | MS.gene95570:CDS |
| GGAAATCAGTTTCTTAAACC+GGG | 0.496848 | 4.3:+50402226 | MS.gene95570:CDS |
| ATGTGAGTAAATTTGCTGTT+GGG | 0.501004 | 4.3:+50401855 | MS.gene95570:CDS |
| CATGTGAGTAAATTTGCTGT+TGG | 0.509127 | 4.3:+50401854 | MS.gene95570:CDS |
| GTGAGGGTGGAGAAGGAGAG+AGG | 0.509612 | 4.3:-50401517 | None:intergenic |
| GGGACAAGACTTCCAAATTA+GGG | 0.517695 | 4.3:+50402327 | MS.gene95570:CDS |
| CATAGTAAAAGAAATAGGGT+TGG | 0.527269 | 4.3:+50401686 | MS.gene95570:CDS |
| GAGCAACGGATCATGTCATC+GGG | 0.527646 | 4.3:+50402748 | MS.gene95570:CDS |
| TGAATTGGATAATCTGATGA+TGG | 0.528552 | 4.3:-50401549 | None:intergenic |
| GGCTTTGGATGGAGGAACAT+TGG | 0.531466 | 4.3:+50402672 | MS.gene95570:CDS |
| AGGATTATTGTGGTTTCGGC+CGG | 0.533130 | 4.3:+50402034 | MS.gene95570:CDS |
| GTTCCATCAAAATTCTCATC+CGG | 0.534764 | 4.3:-50402355 | None:intergenic |
| TCGTTGAGGCTGCTAGGGGC+GGG | 0.534787 | 4.3:+50402704 | MS.gene95570:CDS |
| CCTTTACCGGCTTTGGATGG+AGG | 0.537649 | 4.3:+50402664 | MS.gene95570:CDS |
| AATATTAGATAGGATTATTG+TGG | 0.545638 | 4.3:+50402024 | MS.gene95570:CDS |
| AGGACATGTAGAGCAATTGG+TGG | 0.546380 | 4.3:+50401713 | MS.gene95570:CDS |
| CCTGTAGCGATTATTGCTGT+TGG | 0.546565 | 4.3:+50402556 | MS.gene95570:CDS |
| ATTGGCTTTGATTCTCGTTG+AGG | 0.551872 | 4.3:+50402690 | MS.gene95570:CDS |
| GAGAAAGCTACCTATGGAGG+TGG | 0.552065 | 4.3:+50402726 | MS.gene95570:CDS |
| GTAGAAGGTTTATAATCGCA+AGG | 0.560958 | 4.3:-50402642 | None:intergenic |
| GGAGCAACGGATCATGTCAT+CGG | 0.563395 | 4.3:+50402747 | MS.gene95570:CDS |
| ATGGAAGTGGAGTGTGAGGG+TGG | 0.567328 | 4.3:-50401530 | None:intergenic |
| CCAACAGCAATAATCGCTAC+AGG | 0.569279 | 4.3:-50402556 | None:intergenic |
| CGGGAGAAAGCTACCTATGG+AGG | 0.569640 | 4.3:+50402723 | MS.gene95570:CDS |
| GGATAATCTGATGATGGAAG+TGG | 0.572528 | 4.3:-50401543 | None:intergenic |
| ATCCGTTGCTCCACCTCCAT+AGG | 0.578020 | 4.3:-50402736 | None:intergenic |
| GGGCGGGAGAAAGCTACCTA+TGG | 0.580226 | 4.3:+50402720 | MS.gene95570:CDS |
| TCAGAAACAGAATTAGACCC+CGG | 0.597170 | 4.3:-50402244 | None:intergenic |
| GAAATCAGTTTCTTAAACCG+GGG | 0.598016 | 4.3:+50402227 | MS.gene95570:CDS |
| TACCTATGGAGGTGGAGCAA+CGG | 0.602168 | 4.3:+50402734 | MS.gene95570:CDS |
| AATGTTCCTCCATCCAAAGC+CGG | 0.603827 | 4.3:-50402670 | None:intergenic |
| ATTCTCGTTGAGGCTGCTAG+GGG | 0.630650 | 4.3:+50402700 | MS.gene95570:CDS |
| AATAACATTTGCAATAACAC+CGG | 0.631202 | 4.3:-50402053 | None:intergenic |
| ATTTCCTGGTGTGAATGTGC+CGG | 0.634222 | 4.3:+50402135 | MS.gene95570:CDS |
| GCGCGATGGATTGCTTTCGG+GGG | 0.634313 | 4.3:+50402183 | MS.gene95570:CDS |
| ACCTCCGGCACATTCACACC+AGG | 0.635363 | 4.3:-50402139 | None:intergenic |
| GATGATGGAAGTGGAGTGTG+AGG | 0.635866 | 4.3:-50401534 | None:intergenic |
| TTGCTTAAGGTTAAGAGGGG+GGG | 0.641883 | 4.3:+50402307 | MS.gene95570:CDS |
| CTTCCAAATTAGGGTAACAC+CGG | 0.651525 | 4.3:+50402336 | MS.gene95570:CDS |
| AACCCTACAAACCCACCAAG+AGG | 0.655878 | 4.3:-50401938 | None:intergenic |
| AGGAGAGAGGTATATGACCA+TGG | 0.656468 | 4.3:-50401504 | None:intergenic |
| TCCTGGTGTGAATGTGCCGG+AGG | 0.657210 | 4.3:+50402138 | MS.gene95570:CDS |
| TTTGCTTAAGGTTAAGAGGG+GGG | 0.665357 | 4.3:+50402306 | MS.gene95570:CDS |
| ATGATGGAAGTGGAGTGTGA+GGG | 0.671107 | 4.3:-50401533 | None:intergenic |
| GAACAGGCAAACCAACAGCA+AGG | 0.679335 | 4.3:-50402105 | None:intergenic |
| GCAGCTTCAAGCACAGACTG+AGG | 0.679498 | 4.3:-50401761 | None:intergenic |
| CTGTTGGTGCAGAAGTTGCG+CGG | 0.693355 | 4.3:+50402572 | MS.gene95570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAGATAGGATTATTG+TGG | + | chr4.3:50402024-50402043 | MS.gene95570:CDS | 20.0% |
| !! | ACAATAATCCTATCTAATAT+TGG | - | chr4.3:50402025-50402044 | None:intergenic | 20.0% |
| !! | TAAGCAAAACATATTTCTTA+GGG | - | chr4.3:50402294-50402313 | None:intergenic | 20.0% |
| !! | TTAAGCAAAACATATTTCTT+AGG | - | chr4.3:50402295-50402314 | None:intergenic | 20.0% |
| !! | TTTGCATAGTAAAAGAAATA+GGG | + | chr4.3:50401682-50401701 | MS.gene95570:CDS | 20.0% |
| !!! | AAAAAAGTGATTTTGAGAAA+TGG | - | chr4.3:50401613-50401632 | None:intergenic | 20.0% |
| !!! | AAAAAGTGATTTTGAGAAAT+GGG | - | chr4.3:50401612-50401631 | None:intergenic | 20.0% |
| !!! | ATGTAAATTTGCTTAAGAAT+AGG | + | chr4.3:50401999-50402018 | MS.gene95570:CDS | 20.0% |
| !!! | TAAGAAATATGTTTTGCTTA+AGG | + | chr4.3:50402294-50402313 | MS.gene95570:CDS | 20.0% |
| !!! | TTTTGCATAGTAAAAGAAAT+AGG | + | chr4.3:50401681-50401700 | MS.gene95570:CDS | 20.0% |
| ! | AATAACATTTGCAATAACAC+CGG | - | chr4.3:50402056-50402075 | None:intergenic | 25.0% |
| ! | AGATTTCCTTGAAAAAATCA+AGG | - | chr4.3:50402828-50402847 | None:intergenic | 25.0% |
| !!! | TCTTAACCTTGATTTTTTCA+AGG | + | chr4.3:50402819-50402838 | MS.gene95570:CDS | 25.0% |
| ACCTTAGACAACTTGATATT+TGG | - | chr4.3:50402406-50402425 | None:intergenic | 30.0% | |
| AGAATAGGCCAATATTAGAT+AGG | + | chr4.3:50402014-50402033 | MS.gene95570:CDS | 30.0% | |
| AGATAGGATTATTGTGGTTT+CGG | + | chr4.3:50402030-50402049 | MS.gene95570:CDS | 30.0% | |
| AGCAAATTTACATCATCAAC+AGG | - | chr4.3:50401992-50402011 | None:intergenic | 30.0% | |
| CATAGTAAAAGAAATAGGGT+TGG | + | chr4.3:50401686-50401705 | MS.gene95570:CDS | 30.0% | |
| GATGTGATTCTTGAAGTTAA+TGG | + | chr4.3:50402205-50402224 | MS.gene95570:CDS | 30.0% | |
| GCATTAAACTTCGCTAAAAT+TGG | - | chr4.3:50401887-50401906 | None:intergenic | 30.0% | |
| TATAAACCTTCTACCTTTAC+CGG | + | chr4.3:50402651-50402670 | MS.gene95570:CDS | 30.0% | |
| TGAATTGGATAATCTGATGA+TGG | - | chr4.3:50401552-50401571 | None:intergenic | 30.0% | |
| TGGAAATCAGTTTCTTAAAC+CGG | + | chr4.3:50402225-50402244 | MS.gene95570:CDS | 30.0% | |
| TTTGATGGAACTGGTAAAAT+TGG | + | chr4.3:50402367-50402386 | MS.gene95570:CDS | 30.0% | |
| ! | ATATCAAGTTGTCTAAGGTT+AGG | + | chr4.3:50402407-50402426 | MS.gene95570:CDS | 30.0% |
| ! | ATCATTGTTGTTCATGAAAG+TGG | + | chr4.3:50401800-50401819 | MS.gene95570:CDS | 30.0% |
| ! | ATGTTTTGCTTAAGGTTAAG+AGG | + | chr4.3:50402302-50402321 | MS.gene95570:CDS | 30.0% |
| ! | CTTAAGGAAGAATCTGAAAT+GGG | - | chr4.3:50401581-50401600 | None:intergenic | 30.0% |
| ! | TCCAAATATCAAGTTGTCTA+AGG | + | chr4.3:50402402-50402421 | MS.gene95570:CDS | 30.0% |
| ! | TGTTTTGCTTAAGGTTAAGA+GGG | + | chr4.3:50402303-50402322 | MS.gene95570:CDS | 30.0% |
| ! | TTTGATTATGGAAGCTTTGA+AGG | + | chr4.3:50401737-50401756 | MS.gene95570:CDS | 30.0% |
| !! | ATGTGAGTAAATTTGCTGTT+GGG | + | chr4.3:50401855-50401874 | MS.gene95570:CDS | 30.0% |
| !! | TATCGTCGAATGTTTTTGAT+GGG | + | chr4.3:50402482-50402501 | MS.gene95570:CDS | 30.0% |
| !! | TTATCGTCGAATGTTTTTGA+TGG | + | chr4.3:50402481-50402500 | MS.gene95570:CDS | 30.0% |
| !!! | AAAGAAATAGGGTTGGTTTT+AGG | + | chr4.3:50401693-50401712 | MS.gene95570:CDS | 30.0% |
| !!! | ATTATGCTTGTTTTGCTTCT+TGG | + | chr4.3:50402772-50402791 | MS.gene95570:CDS | 30.0% |
| ACTATGCAAAAACTGCTTCT+TGG | - | chr4.3:50401672-50401691 | None:intergenic | 35.0% | |
| CCAGGAAATATTTCTTGAAC+AGG | - | chr4.3:50402124-50402143 | None:intergenic | 35.0% | |
| CCTGTTCAAGAAATATTTCC+TGG | + | chr4.3:50402121-50402140 | MS.gene95570:CDS | 35.0% | |
| CGCAAGGTTAATATTGAGTA+TGG | - | chr4.3:50402629-50402648 | None:intergenic | 35.0% | |
| GAAATCAGTTTCTTAAACCG+GGG | + | chr4.3:50402227-50402246 | MS.gene95570:CDS | 35.0% | |
| GCTTAAGGAAGAATCTGAAA+TGG | - | chr4.3:50401582-50401601 | None:intergenic | 35.0% | |
| GGAAATCAGTTTCTTAAACC+GGG | + | chr4.3:50402226-50402245 | MS.gene95570:CDS | 35.0% | |
| GTAGAAGGTTTATAATCGCA+AGG | - | chr4.3:50402645-50402664 | None:intergenic | 35.0% | |
| GTTCCATCAAAATTCTCATC+CGG | - | chr4.3:50402358-50402377 | None:intergenic | 35.0% | |
| TATTGAGTATGGCTGCAAAT+TGG | - | chr4.3:50402618-50402637 | None:intergenic | 35.0% | |
| TCAACAGGAATATCACTATC+TGG | - | chr4.3:50401977-50401996 | None:intergenic | 35.0% | |
| TCACTATCTGGATCATTATC+AGG | - | chr4.3:50401965-50401984 | None:intergenic | 35.0% | |
| TGAAATGGGTCTCTTTGAAT+TGG | - | chr4.3:50401567-50401586 | None:intergenic | 35.0% | |
| ! | ACAGCTTCCACTACATTTTT+CGG | - | chr4.3:50402433-50402452 | None:intergenic | 35.0% |
| ! | CTTTACTGCGAAAGAGTTTT+GGG | + | chr4.3:50402456-50402475 | MS.gene95570:CDS | 35.0% |
| ! | GTTTTGCTTAAGGTTAAGAG+GGG | + | chr4.3:50402304-50402323 | MS.gene95570:CDS | 35.0% |
| ! | TTTACTGCGAAAGAGTTTTG+GGG | + | chr4.3:50402457-50402476 | MS.gene95570:CDS | 35.0% |
| ! | TTTAGGACATGTAGAGCAAT+TGG | + | chr4.3:50401710-50401729 | MS.gene95570:CDS | 35.0% |
| ! | TTTGTTCAAATCCTTGCTGT+TGG | + | chr4.3:50402094-50402113 | MS.gene95570:CDS | 35.0% |
| ! | TTTTGCTTAAGGTTAAGAGG+GGG | + | chr4.3:50402305-50402324 | MS.gene95570:CDS | 35.0% |
| !! | AGTAAATTTGCTGTTGGGTT+TGG | + | chr4.3:50401860-50401879 | MS.gene95570:CDS | 35.0% |
| !! | CATGTGAGTAAATTTGCTGT+TGG | + | chr4.3:50401854-50401873 | MS.gene95570:CDS | 35.0% |
| !! | GATGAGAATTTTGATGGAAC+TGG | + | chr4.3:50402358-50402377 | MS.gene95570:CDS | 35.0% |
| !! | GCAATTGGTGGATTTGATTA+TGG | + | chr4.3:50401725-50401744 | MS.gene95570:CDS | 35.0% |
| !! | TAAGAGTGTCGCGAATAATA+AGG | - | chr4.3:50402804-50402823 | None:intergenic | 35.0% |
| !!! | GAAATGGGTTTTGAAGCTTA+AGG | - | chr4.3:50401597-50401616 | None:intergenic | 35.0% |
| ATGCAAAAACTGCTTCTTGG+TGG | - | chr4.3:50401669-50401688 | None:intergenic | 40.0% | |
| CCAAAACTCTTTCGCAGTAA+AGG | - | chr4.3:50402458-50402477 | None:intergenic | 40.0% | |
| CTTCCAAATTAGGGTAACAC+CGG | + | chr4.3:50402336-50402355 | MS.gene95570:CDS | 40.0% | |
| GGGACAAGACTTCCAAATTA+GGG | + | chr4.3:50402327-50402346 | MS.gene95570:CDS | 40.0% | |
| TCAGAAACAGAATTAGACCC+CGG | - | chr4.3:50402247-50402266 | None:intergenic | 40.0% | |
| TTTGCTTAAGGTTAAGAGGG+GGG | + | chr4.3:50402306-50402325 | MS.gene95570:CDS | 40.0% | |
| ! | ACACCGGATGAGAATTTTGA+TGG | + | chr4.3:50402352-50402371 | MS.gene95570:CDS | 40.0% |
| ! | ACCAAGAGGAAAAGCTCTAA+TGG | - | chr4.3:50401927-50401946 | None:intergenic | 40.0% |
| ! | ATTAGAGCTTTTCCTCTTGG+TGG | + | chr4.3:50401926-50401945 | MS.gene95570:CDS | 40.0% |
| ! | CCTTTACTGCGAAAGAGTTT+TGG | + | chr4.3:50402455-50402474 | MS.gene95570:CDS | 40.0% |
| ! | CTTTTCTCAGACAGCTAGTA+AGG | + | chr4.3:50402525-50402544 | MS.gene95570:CDS | 40.0% |
| ! | TCCATTAGAGCTTTTCCTCT+TGG | + | chr4.3:50401923-50401942 | MS.gene95570:CDS | 40.0% |
| ! | TTAGAGCTTTTCCTCTTGGT+GGG | + | chr4.3:50401927-50401946 | MS.gene95570:CDS | 40.0% |
| ! | TTCTTGCTGCTTCTCTTCAA+GGG | + | chr4.3:50401828-50401847 | MS.gene95570:CDS | 40.0% |
| ! | TTTCTTGCTGCTTCTCTTCA+AGG | + | chr4.3:50401827-50401846 | MS.gene95570:CDS | 40.0% |
| !! | ATTGGCTTTGATTCTCGTTG+AGG | + | chr4.3:50402690-50402709 | MS.gene95570:CDS | 40.0% |
| !! | GGATAATCTGATGATGGAAG+TGG | - | chr4.3:50401546-50401565 | None:intergenic | 40.0% |
| AATGTTCCTCCATCCAAAGC+CGG | - | chr4.3:50402673-50402692 | None:intergenic | 45.0% | |
| AGGACATGTAGAGCAATTGG+TGG | + | chr4.3:50401713-50401732 | MS.gene95570:CDS | 45.0% | |
| AGGATTATTGTGGTTTCGGC+CGG | + | chr4.3:50402034-50402053 | MS.gene95570:CDS | 45.0% | |
| ATTTCCTGGTGTGAATGTGC+CGG | + | chr4.3:50402135-50402154 | MS.gene95570:CDS | 45.0% | |
| CAGACAGCTAGTAAGGTTTC+AGG | + | chr4.3:50402532-50402551 | MS.gene95570:CDS | 45.0% | |
| CCAACAGCAATAATCGCTAC+AGG | - | chr4.3:50402559-50402578 | None:intergenic | 45.0% | |
| CCTGTAGCGATTATTGCTGT+TGG | + | chr4.3:50402556-50402575 | MS.gene95570:CDS | 45.0% | |
| GGGGACAAGACTTCCAAATT+AGG | + | chr4.3:50402326-50402345 | MS.gene95570:CDS | 45.0% | |
| GGTTAGGCCGAAAAATGTAG+TGG | + | chr4.3:50402423-50402442 | MS.gene95570:CDS | 45.0% | |
| TTGCTTAAGGTTAAGAGGGG+GGG | + | chr4.3:50402307-50402326 | MS.gene95570:CDS | 45.0% | |
| ! | ATGATGGAAGTGGAGTGTGA+GGG | - | chr4.3:50401536-50401555 | None:intergenic | 45.0% |
| !! | CATCCGGTGTTACCCTAATT+TGG | - | chr4.3:50402342-50402361 | None:intergenic | 45.0% |
| !! | TTCCTCTTGGTGGGTTTGTA+GGG | + | chr4.3:50401936-50401955 | MS.gene95570:CDS | 45.0% |
| !! | TTTCCTCTTGGTGGGTTTGT+AGG | + | chr4.3:50401935-50401954 | MS.gene95570:CDS | 45.0% |
| AACCCTACAAACCCACCAAG+AGG | - | chr4.3:50401941-50401960 | None:intergenic | 50.0% | |
| ATTCTCGTTGAGGCTGCTAG+GGG | + | chr4.3:50402700-50402719 | MS.gene95570:CDS | 50.0% | |
| CCAAAGCCGGTAAAGGTAGA+AGG | - | chr4.3:50402660-50402679 | None:intergenic | 50.0% | |
| GAACAGGCAAACCAACAGCA+AGG | - | chr4.3:50402108-50402127 | None:intergenic | 50.0% | |
| GAGAAAGCTACCTATGGAGG+TGG | + | chr4.3:50402726-50402745 | MS.gene95570:CDS | 50.0% | |
| GAGCAACGGATCATGTCATC+GGG | + | chr4.3:50402748-50402767 | MS.gene95570:CDS | 50.0% | |
| GATTCTCGTTGAGGCTGCTA+GGG | + | chr4.3:50402699-50402718 | MS.gene95570:CDS | 50.0% | |
| GGAGCAACGGATCATGTCAT+CGG | + | chr4.3:50402747-50402766 | MS.gene95570:CDS | 50.0% | |
| GGTGGTGAGTTTCACGTTAG+AGG | - | chr4.3:50401651-50401670 | None:intergenic | 50.0% | |
| TACCTATGGAGGTGGAGCAA+CGG | + | chr4.3:50402734-50402753 | MS.gene95570:CDS | 50.0% | |
| TGATTCTCGTTGAGGCTGCT+AGG | + | chr4.3:50402698-50402717 | MS.gene95570:CDS | 50.0% | |
| !! | CCTTCTACCTTTACCGGCTT+TGG | + | chr4.3:50402657-50402676 | MS.gene95570:CDS | 50.0% |
| !! | CTACCTTTACCGGCTTTGGA+TGG | + | chr4.3:50402661-50402680 | MS.gene95570:CDS | 50.0% |
| !! | GATGATGGAAGTGGAGTGTG+AGG | - | chr4.3:50401537-50401556 | None:intergenic | 50.0% |
| !! | GGCTTTGGATGGAGGAACAT+TGG | + | chr4.3:50402672-50402691 | MS.gene95570:CDS | 50.0% |
| !! | TTCGCGCGATGGATTGCTTT+CGG | + | chr4.3:50402180-50402199 | MS.gene95570:CDS | 50.0% |
| ATCCGTTGCTCCACCTCCAT+AGG | - | chr4.3:50402739-50402758 | None:intergenic | 55.0% | |
| ATGGAAGTGGAGTGTGAGGG+TGG | - | chr4.3:50401533-50401552 | None:intergenic | 55.0% | |
| CCTCCATCCAAAGCCGGTAA+AGG | - | chr4.3:50402667-50402686 | None:intergenic | 55.0% | |
| CGGGAGAAAGCTACCTATGG+AGG | + | chr4.3:50402723-50402742 | MS.gene95570:CDS | 55.0% | |
| CTGTTGGTGCAGAAGTTGCG+CGG | + | chr4.3:50402572-50402591 | MS.gene95570:CDS | 55.0% | |
| GCAGCTTCAAGCACAGACTG+AGG | - | chr4.3:50401764-50401783 | None:intergenic | 55.0% | |
| GCCGAAAAAGGTCGAACCTC+CGG | - | chr4.3:50402157-50402176 | None:intergenic | 55.0% | |
| GTTGCGCGGTCGAACATTGA+TGG | + | chr4.3:50402586-50402605 | MS.gene95570:CDS | 55.0% | |
| ! | GCCGGAGGTTCGACCTTTTT+CGG | + | chr4.3:50402153-50402172 | MS.gene95570:CDS | 55.0% |
| !! | CCTTTACCGGCTTTGGATGG+AGG | + | chr4.3:50402664-50402683 | MS.gene95570:CDS | 55.0% |
| !! | TCGCGCGATGGATTGCTTTC+GGG | + | chr4.3:50402181-50402200 | MS.gene95570:CDS | 55.0% |
| ACCTCCGGCACATTCACACC+AGG | - | chr4.3:50402142-50402161 | None:intergenic | 60.0% | |
| GGGCGGGAGAAAGCTACCTA+TGG | + | chr4.3:50402720-50402739 | MS.gene95570:CDS | 60.0% | |
| GTGAGGGTGGAGAAGGAGAG+AGG | - | chr4.3:50401520-50401539 | None:intergenic | 60.0% | |
| GTGGAGTGTGAGGGTGGAGA+AGG | - | chr4.3:50401527-50401546 | None:intergenic | 60.0% | |
| TCCTGGTGTGAATGTGCCGG+AGG | + | chr4.3:50402138-50402157 | MS.gene95570:CDS | 60.0% | |
| TCGCGCGAAGCAGCCGAAAA+AGG | - | chr4.3:50402169-50402188 | None:intergenic | 60.0% | |
| ! | TTTTCGGCTGCTTCGCGCGA+TGG | + | chr4.3:50402169-50402188 | MS.gene95570:CDS | 60.0% |
| !! | CGCGCGATGGATTGCTTTCG+GGG | + | chr4.3:50402182-50402201 | MS.gene95570:CDS | 60.0% |
| !! | GCGCGATGGATTGCTTTCGG+GGG | + | chr4.3:50402183-50402202 | MS.gene95570:CDS | 60.0% |
| CTCGTTGAGGCTGCTAGGGG+CGG | + | chr4.3:50402703-50402722 | MS.gene95570:CDS | 65.0% | |
| TCGTTGAGGCTGCTAGGGGC+GGG | + | chr4.3:50402704-50402723 | MS.gene95570:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 50401506 | 50402852 | 50401506 | ID=MS.gene95570 |
| chr4.3 | mRNA | 50401506 | 50402852 | 50401506 | ID=MS.gene95570.t1;Parent=MS.gene95570 |
| chr4.3 | exon | 50401506 | 50402852 | 50401506 | ID=MS.gene95570.t1.exon1;Parent=MS.gene95570.t1 |
| chr4.3 | CDS | 50401506 | 50402852 | 50401506 | ID=cds.MS.gene95570.t1;Parent=MS.gene95570.t1 |
| Gene Sequence |
| Protein sequence |
