Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99165.t1 | XP_013443877.1 | 97.2 | 579 | 15 | 1 | 1 | 579 | 1 | 578 | 1.90E-305 | 1057.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99165.t1 | Q9LJE2 | 79.2 | 514 | 104 | 2 | 69 | 579 | 89 | 602 | 7.1e-237 | 821.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99165.t1 | A0A072TKF3 | 97.2 | 579 | 15 | 1 | 1 | 579 | 1 | 578 | 1.4e-305 | 1057.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene99165 | 0.825581 | 4.34E-54 | -1.69E-46 |
| MS.gene049151 | MS.gene99165 | 0.808202 | 3.48E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene99165 | 0.817115 | 3.90E-52 | -1.69E-46 |
| MS.gene049260 | MS.gene99165 | 0.839767 | 1.30E-57 | -1.69E-46 |
| MS.gene049284 | MS.gene99165 | 0.828074 | 1.10E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene99165 | 0.85345 | 2.37E-61 | -1.69E-46 |
| MS.gene04933 | MS.gene99165 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene99165 | 0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene99165 | 0.871401 | 7.03E-67 | -1.69E-46 |
| MS.gene049389 | MS.gene99165 | 0.84126 | 5.29E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene99165 | 0.84687 | 1.66E-59 | -1.69E-46 |
| MS.gene049599 | MS.gene99165 | -0.84058 | 7.98E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene99165 | 0.841009 | 6.16E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene99165 | 0.844104 | 9.29E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene99165 | 0.934516 | 3.58E-96 | -1.69E-46 |
| MS.gene049760 | MS.gene99165 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene99165 | 0.831286 | 1.82E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene99165 | 0.825477 | 4.59E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene99165 | 0.858893 | 6.03E-63 | -1.69E-46 |
| MS.gene050099 | MS.gene99165 | 0.888359 | 6.33E-73 | -1.69E-46 |
| MS.gene050128 | MS.gene99165 | 0.857621 | 1.44E-62 | -1.69E-46 |
| MS.gene050226 | MS.gene99165 | 0.806751 | 7.06E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene99165 | 0.81566 | 8.25E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene99165 | 0.803945 | 2.74E-49 | -1.69E-46 |
| MS.gene050231 | MS.gene99165 | 0.835184 | 1.95E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene99165 | 0.926134 | 7.11E-91 | -1.69E-46 |
| MS.gene050319 | MS.gene99165 | -0.834579 | 2.76E-56 | -1.69E-46 |
| MS.gene050330 | MS.gene99165 | -0.825833 | 3.78E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene99165 | 0.866104 | 3.64E-65 | -1.69E-46 |
| MS.gene050406 | MS.gene99165 | 0.806454 | 8.16E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene99165 | 0.833405 | 5.44E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene99165 | 0.860693 | 1.73E-63 | -1.69E-46 |
| MS.gene050516 | MS.gene99165 | 0.823053 | 1.70E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene99165 | 0.873755 | 1.15E-67 | -1.69E-46 |
| MS.gene050558 | MS.gene99165 | 0.858776 | 6.53E-63 | -1.69E-46 |
| MS.gene050623 | MS.gene99165 | -0.833075 | 6.57E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene99165 | 0.849702 | 2.73E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene99165 | 0.81873 | 1.68E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene99165 | 0.802482 | 5.50E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene99165 | 0.879508 | 1.18E-69 | -1.69E-46 |
| MS.gene05119 | MS.gene99165 | -0.844525 | 7.16E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene99165 | 0.905257 | 5.20E-80 | -1.69E-46 |
| MS.gene051487 | MS.gene99165 | 0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene99165 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene99165 | 0.896538 | 3.35E-76 | -1.69E-46 |
| MS.gene051663 | MS.gene99165 | 0.905002 | 6.80E-80 | -1.69E-46 |
| MS.gene051860 | MS.gene99165 | 0.88563 | 6.89E-72 | -1.69E-46 |
| MS.gene051877 | MS.gene99165 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene99165 | 0.837461 | 5.13E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene99165 | 0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene99165 | 0.914502 | 1.78E-84 | -1.69E-46 |
| MS.gene052178 | MS.gene99165 | 0.887799 | 1.04E-72 | -1.69E-46 |
| MS.gene052188 | MS.gene99165 | 0.877136 | 8.00E-69 | -1.69E-46 |
| MS.gene052207 | MS.gene99165 | 0.865204 | 7.00E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene99165 | 0.851783 | 7.09E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene99165 | 0.867215 | 1.61E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene99165 | 0.811583 | 6.51E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene99165 | 0.881538 | 2.21E-70 | -1.69E-46 |
| MS.gene052340 | MS.gene99165 | 0.870729 | 1.17E-66 | -1.69E-46 |
| MS.gene052485 | MS.gene99165 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene052600 | MS.gene99165 | 0.807615 | 4.63E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene99165 | 0.81275 | 3.62E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene99165 | 0.842497 | 2.49E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene99165 | 0.866368 | 3.00E-65 | -1.69E-46 |
| MS.gene053559 | MS.gene99165 | 0.841914 | 3.56E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene99165 | 0.938961 | 2.82E-99 | -1.69E-46 |
| MS.gene053907 | MS.gene99165 | 0.847005 | 1.52E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene99165 | 0.836428 | 9.41E-57 | -1.69E-46 |
| MS.gene053971 | MS.gene99165 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene054010 | MS.gene99165 | 0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene99165 | 0.844939 | 5.54E-59 | -1.69E-46 |
| MS.gene054012 | MS.gene99165 | 0.827963 | 1.17E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene99165 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene99165 | 0.87316 | 1.82E-67 | -1.69E-46 |
| MS.gene054185 | MS.gene99165 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene054214 | MS.gene99165 | 0.808362 | 3.21E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene99165 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene99165 | 0.860607 | 1.84E-63 | -1.69E-46 |
| MS.gene054542 | MS.gene99165 | 0.803249 | 3.81E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene99165 | 0.865016 | 8.01E-65 | -1.69E-46 |
| MS.gene054667 | MS.gene99165 | 0.821328 | 4.28E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene99165 | 0.823554 | 1.30E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene99165 | 0.822444 | 2.36E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene99165 | 0.823693 | 1.21E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene99165 | 0.853369 | 2.50E-61 | -1.69E-46 |
| MS.gene054942 | MS.gene99165 | 0.86685 | 2.11E-65 | -1.69E-46 |
| MS.gene054955 | MS.gene99165 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene99165 | 0.828384 | 9.26E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene99165 | 0.848129 | 7.46E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene99165 | 0.805073 | 1.59E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene99165 | 0.913709 | 4.49E-84 | -1.69E-46 |
| MS.gene055303 | MS.gene99165 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene99165 | 0.901014 | 4.11E-78 | -1.69E-46 |
| MS.gene055422 | MS.gene99165 | 0.979573 | 2.89E-148 | -1.69E-46 |
| MS.gene055428 | MS.gene99165 | 0.916567 | 1.53E-85 | -1.69E-46 |
| MS.gene05553 | MS.gene99165 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene99165 | 0.865391 | 6.11E-65 | -1.69E-46 |
| MS.gene055712 | MS.gene99165 | 0.868114 | 8.30E-66 | -1.69E-46 |
| MS.gene055859 | MS.gene99165 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene99165 | 0.82735 | 1.64E-54 | -1.69E-46 |
| MS.gene056069 | MS.gene99165 | -0.839155 | 1.88E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene99165 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene056314 | MS.gene99165 | 0.839695 | 1.36E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene99165 | 0.860293 | 2.28E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene99165 | 0.82705 | 1.94E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene99165 | 0.819826 | 9.47E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene99165 | 0.895745 | 7.16E-76 | -1.69E-46 |
| MS.gene056659 | MS.gene99165 | 0.824378 | 8.34E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene99165 | 0.823134 | 1.63E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene99165 | 0.830992 | 2.15E-55 | -1.69E-46 |
| MS.gene056899 | MS.gene99165 | -0.815594 | 8.53E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene99165 | 0.816273 | 6.02E-52 | -1.69E-46 |
| MS.gene056931 | MS.gene99165 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene99165 | 0.810853 | 9.38E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene99165 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene99165 | 0.838209 | 3.29E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene99165 | 0.868483 | 6.31E-66 | -1.69E-46 |
| MS.gene057121 | MS.gene99165 | 0.895942 | 5.93E-76 | -1.69E-46 |
| MS.gene057123 | MS.gene99165 | 0.817627 | 2.99E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene99165 | 0.897866 | 9.28E-77 | -1.69E-46 |
| MS.gene057260 | MS.gene99165 | 0.833074 | 6.57E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene99165 | 0.819913 | 9.05E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene99165 | 0.829852 | 4.08E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene99165 | 0.913891 | 3.63E-84 | -1.69E-46 |
| MS.gene057448 | MS.gene99165 | 0.857354 | 1.73E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene99165 | 0.849711 | 2.71E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene99165 | 0.869441 | 3.09E-66 | -1.69E-46 |
| MS.gene057469 | MS.gene99165 | 0.850578 | 1.55E-60 | -1.69E-46 |
| MS.gene057754 | MS.gene99165 | 0.818366 | 2.03E-52 | -1.69E-46 |
| MS.gene057779 | MS.gene99165 | 0.802071 | 6.68E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene99165 | 0.803305 | 3.71E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene99165 | 0.911966 | 3.34E-83 | -1.69E-46 |
| MS.gene058082 | MS.gene99165 | 0.855426 | 6.36E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene99165 | 0.918925 | 8.53E-87 | -1.69E-46 |
| MS.gene058142 | MS.gene99165 | 0.864286 | 1.36E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene99165 | 0.827934 | 1.19E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene99165 | 0.840428 | 8.75E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene99165 | 0.867249 | 1.57E-65 | -1.69E-46 |
| MS.gene058365 | MS.gene99165 | 0.821569 | 3.77E-53 | -1.69E-46 |
| MS.gene058484 | MS.gene99165 | 0.801 | 1.11E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene99165 | 0.911815 | 3.96E-83 | -1.69E-46 |
| MS.gene058710 | MS.gene99165 | 0.842962 | 1.88E-58 | -1.69E-46 |
| MS.gene058749 | MS.gene99165 | 0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene058787 | MS.gene99165 | 0.815934 | 7.17E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene99165 | 0.812381 | 4.36E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene99165 | 0.868583 | 5.86E-66 | -1.69E-46 |
| MS.gene05886 | MS.gene99165 | 0.83822 | 3.27E-57 | -1.69E-46 |
| MS.gene058928 | MS.gene99165 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene99165 | 0.80788 | 4.07E-50 | -1.69E-46 |
| MS.gene059033 | MS.gene99165 | -0.819687 | 1.02E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene99165 | 0.894965 | 1.50E-75 | -1.69E-46 |
| MS.gene059228 | MS.gene99165 | 0.837624 | 4.66E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene99165 | 0.828379 | 9.29E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene99165 | 0.828181 | 1.04E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene99165 | 0.860923 | 1.47E-63 | -1.69E-46 |
| MS.gene059342 | MS.gene99165 | 0.853111 | 2.97E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene99165 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene99165 | 0.901577 | 2.33E-78 | -1.69E-46 |
| MS.gene059597 | MS.gene99165 | 0.89375 | 4.70E-75 | -1.69E-46 |
| MS.gene05959 | MS.gene99165 | 0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene99165 | 0.875906 | 2.13E-68 | -1.69E-46 |
| MS.gene059688 | MS.gene99165 | 0.860282 | 2.30E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene99165 | 0.877152 | 7.90E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene99165 | 0.869508 | 2.94E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene99165 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene99165 | 0.923099 | 4.15E-89 | -1.69E-46 |
| MS.gene059894 | MS.gene99165 | 0.901168 | 3.52E-78 | -1.69E-46 |
| MS.gene059899 | MS.gene99165 | 0.846977 | 1.55E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene99165 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene99165 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene060005 | MS.gene99165 | 0.813756 | 2.18E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene99165 | 0.879151 | 1.57E-69 | -1.69E-46 |
| MS.gene060407 | MS.gene99165 | 0.818518 | 1.88E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene99165 | 0.861077 | 1.32E-63 | -1.69E-46 |
| MS.gene060495 | MS.gene99165 | 0.82624 | 3.02E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene99165 | 0.833211 | 6.08E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene99165 | 0.864967 | 8.30E-65 | -1.69E-46 |
| MS.gene060994 | MS.gene99165 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene061000 | MS.gene99165 | 0.801793 | 7.61E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene99165 | 0.912734 | 1.39E-83 | -1.69E-46 |
| MS.gene061051 | MS.gene99165 | -0.843895 | 1.06E-58 | -1.69E-46 |
| MS.gene061112 | MS.gene99165 | 0.822281 | 2.58E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene99165 | 0.809129 | 2.20E-50 | -1.69E-46 |
| MS.gene061265 | MS.gene99165 | 0.82038 | 7.07E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015944 | MS.gene99165 | PPI |
| MS.gene99165 | MS.gene74922 | PPI |
| MS.gene43954 | MS.gene99165 | PPI |
| MS.gene99165 | MS.gene60239 | PPI |
| MS.gene99165 | MS.gene021634 | PPI |
| MS.gene99165 | MS.gene036418 | PPI |
| MS.gene99165 | MS.gene71480 | PPI |
| MS.gene005078 | MS.gene99165 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99165.t1 | MTR_8g007295 | 97.755 | 579 | 12 | 1 | 1 | 579 | 1 | 578 | 0.0 | 1168 |
| MS.gene99165.t1 | MTR_8g007295 | 98.052 | 462 | 8 | 1 | 1 | 462 | 1 | 461 | 0.0 | 936 |
| MS.gene99165.t1 | MTR_2g036600 | 35.387 | 568 | 302 | 10 | 47 | 578 | 55 | 593 | 7.71e-110 | 341 |
| MS.gene99165.t1 | MTR_2g036600 | 38.085 | 470 | 231 | 8 | 142 | 578 | 10 | 452 | 1.29e-100 | 313 |
| MS.gene99165.t1 | MTR_4g127770 | 34.843 | 574 | 297 | 13 | 47 | 578 | 542 | 1080 | 3.90e-98 | 322 |
| MS.gene99165.t1 | MTR_4g127770 | 34.163 | 442 | 245 | 7 | 95 | 501 | 104 | 534 | 3.66e-71 | 248 |
| MS.gene99165.t1 | MTR_4g127790 | 38.947 | 380 | 200 | 5 | 207 | 578 | 36 | 391 | 2.01e-88 | 279 |
| MS.gene99165.t1 | MTR_4g120810 | 23.295 | 352 | 224 | 10 | 23 | 354 | 14 | 339 | 3.21e-18 | 89.0 |
| MS.gene99165.t1 | MTR_4g120810 | 23.295 | 352 | 224 | 10 | 23 | 354 | 14 | 339 | 3.29e-18 | 88.6 |
| MS.gene99165.t1 | MTR_8g104740 | 25.448 | 279 | 183 | 7 | 96 | 354 | 68 | 341 | 1.55e-17 | 86.7 |
| MS.gene99165.t1 | MTR_8g104740 | 25.448 | 279 | 183 | 7 | 96 | 354 | 68 | 341 | 1.74e-17 | 86.7 |
| MS.gene99165.t1 | MTR_4g052070 | 28.470 | 281 | 175 | 10 | 96 | 354 | 53 | 329 | 1.55e-16 | 83.6 |
| MS.gene99165.t1 | MTR_1g014140 | 22.200 | 500 | 295 | 18 | 112 | 573 | 90 | 533 | 7.48e-16 | 80.9 |
| MS.gene99165.t1 | MTR_1g113700 | 24.483 | 290 | 187 | 8 | 84 | 354 | 20 | 296 | 5.99e-15 | 78.6 |
| MS.gene99165.t1 | MTR_8g104740 | 31.967 | 122 | 82 | 1 | 234 | 354 | 8 | 129 | 1.02e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99165.t1 | AT3G13490 | 79.159 | 523 | 106 | 2 | 60 | 579 | 80 | 602 | 0.0 | 872 |
| MS.gene99165.t1 | AT3G11710 | 37.565 | 575 | 276 | 11 | 52 | 579 | 73 | 611 | 8.55e-112 | 347 |
| MS.gene99165.t1 | AT4G26870 | 23.265 | 490 | 291 | 17 | 116 | 573 | 88 | 524 | 1.27e-20 | 95.9 |
| MS.gene99165.t1 | AT4G33760 | 26.415 | 265 | 171 | 6 | 109 | 354 | 84 | 343 | 5.67e-17 | 85.1 |
| MS.gene99165.t1 | AT4G33760 | 27.957 | 186 | 126 | 3 | 176 | 354 | 23 | 207 | 1.15e-11 | 67.8 |
Find 142 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATATATATAGAGATTT+AGG | 0.190041 | 8.2:-82426765 | MS.gene99165:CDS |
| CGGGATCGATTTCAATGAAT+TGG | 0.236564 | 8.2:-82420950 | MS.gene99165:CDS |
| GTTGTCTAATTTGATCTTCT+AGG | 0.240241 | 8.2:+82419717 | None:intergenic |
| TTCCTAACGGCTTTGGAGTA+TGG | 0.242936 | 8.2:-82419599 | MS.gene99165:CDS |
| ACAATTAAACGCACAGAAAA+AGG | 0.251919 | 8.2:-82426363 | MS.gene99165:intron |
| TATGGAATGCCTCCAGCTTC+TGG | 0.268256 | 8.2:-82419581 | MS.gene99165:CDS |
| TCATCAATGGATTCCATGTT+AGG | 0.289009 | 8.2:+82428140 | None:intergenic |
| AAAGCTTACTGTTGATTATC+AGG | 0.299156 | 8.2:-82421141 | MS.gene99165:intron |
| AATCCACAAACCTGCAAAAC+TGG | 0.301957 | 8.2:+82423304 | None:intergenic |
| CGGAGGACAATGGATTCTTT+AGG | 0.322824 | 8.2:-82423346 | MS.gene99165:CDS |
| CGATGATTTCCTAACGGCTT+TGG | 0.326372 | 8.2:-82419606 | MS.gene99165:CDS |
| AACAAAACTGTCCTTATTGT+TGG | 0.332509 | 8.2:+82419384 | None:intergenic |
| ATCTCACCAGCATTCTCTTT+AGG | 0.332997 | 8.2:+82422390 | None:intergenic |
| GCCAATGGAGATATCTCAAT+TGG | 0.333726 | 8.2:+82420552 | None:intergenic |
| TTGACACTAAGAGACGATTC+AGG | 0.336175 | 8.2:-82426654 | MS.gene99165:CDS |
| ATTGTTGCTAGGAGAGCATT+TGG | 0.336932 | 8.2:-82426690 | MS.gene99165:CDS |
| AATCTTGTTAAAGAAATTTC+CGG | 0.340550 | 8.2:-82420970 | MS.gene99165:CDS |
| GTGCATGGTCTCCCTCCTCC+AGG | 0.349566 | 8.2:+82420993 | None:intergenic |
| TACATTCTTTCCAGGGGCTT+GGG | 0.354075 | 8.2:-82419481 | MS.gene99165:intron |
| ACCTCTATAGTTGTAAATTC+CGG | 0.362930 | 8.2:+82421830 | None:intergenic |
| AGACGATTCAGGGACAATTC+AGG | 0.369249 | 8.2:-82426643 | MS.gene99165:intron |
| TCCAGGGGCTTGGGATTGAC+AGG | 0.376818 | 8.2:-82419472 | MS.gene99165:intron |
| TTACATTCTTTCCAGGGGCT+TGG | 0.380952 | 8.2:-82419482 | MS.gene99165:intron |
| ATCTTGTTAAAGAAATTTCC+GGG | 0.390588 | 8.2:-82420969 | MS.gene99165:CDS |
| TGAATAAAATTGTTCATCAA+TGG | 0.390633 | 8.2:+82428127 | None:intergenic |
| TGGAAGCTTACCTGATCTAT+AGG | 0.390653 | 8.2:+82420109 | None:intergenic |
| TTCATTGATTAGGGAGAAGC+TGG | 0.396179 | 8.2:-82422494 | MS.gene99165:intron |
| TTGAAGGCATATGTTGATAT+TGG | 0.396591 | 8.2:-82426408 | MS.gene99165:CDS |
| CTGCTAAATTCATCATGCTT+TGG | 0.405344 | 8.2:+82421201 | None:intergenic |
| GTACTCAAGGTCCAACAATA+AGG | 0.410867 | 8.2:-82419395 | None:intergenic |
| AATGATCATGTATCTATTGC+GGG | 0.414985 | 8.2:-82426717 | MS.gene99165:CDS |
| AATGTAGGTTGGATGAGCTT+TGG | 0.416343 | 8.2:+82420588 | None:intergenic |
| GGCTATTACATCTCTAATGC+TGG | 0.425350 | 8.2:+82419424 | None:intergenic |
| GGGATCGATTTCAATGAATT+GGG | 0.428050 | 8.2:-82420949 | MS.gene99165:CDS |
| ACAGGGAGTTGAGATATGTT+TGG | 0.433439 | 8.2:-82421022 | MS.gene99165:intron |
| TATTGTTGGACCTTGAGTAC+TGG | 0.435483 | 8.2:+82419398 | None:intergenic |
| TTTCTTTATGGCAGGTGGGT+GGG | 0.442944 | 8.2:-82421916 | MS.gene99165:intron |
| ATATATAGAGATTTAGGAAA+TGG | 0.443716 | 8.2:-82426759 | MS.gene99165:CDS |
| GGGGCTTGGGATTGACAGGT+TGG | 0.444034 | 8.2:-82419468 | MS.gene99165:CDS |
| ATCGTCTCTTAGTGTCAAAA+AGG | 0.444746 | 8.2:+82426659 | None:intergenic |
| AAAGCAGCTCTTTCAACAAA+TGG | 0.446908 | 8.2:-82419683 | MS.gene99165:CDS |
| GGCAGATTGGCATGCTTCAA+TGG | 0.449344 | 8.2:+82420852 | None:intergenic |
| CAGTGTGCTCTTGCAGTTCA+CGG | 0.450059 | 8.2:-82421164 | MS.gene99165:CDS |
| TTCATTTGTGGTCGGGAACT+AGG | 0.452404 | 8.2:-82420157 | MS.gene99165:CDS |
| GGTCGAATATTTAGAAATGA+AGG | 0.453886 | 8.2:-82421872 | MS.gene99165:CDS |
| CTCCCTATCGGAGGTGGAAG+TGG | 0.454419 | 8.2:+82428003 | None:intergenic |
| GTGACATACCACAATTCTCT+TGG | 0.455727 | 8.2:-82422449 | MS.gene99165:CDS |
| AATATCAACTCGTCATAATC+CGG | 0.456214 | 8.2:-82421849 | MS.gene99165:CDS |
| ACGGCGGTTGCGACCGGAGG+AGG | 0.461545 | 8.2:+82428045 | None:intergenic |
| TGATCAGTTTGAGCAGTTGA+AGG | 0.461596 | 8.2:-82426424 | MS.gene99165:CDS |
| CGGAACACATCAGCTACCTC+TGG | 0.463336 | 8.2:+82424275 | None:intergenic |
| TCTTATTCAACCACCTCCTC+CGG | 0.464171 | 8.2:-82428058 | MS.gene99165:CDS |
| GTTAGACCGTGATATTTGTC+AGG | 0.473334 | 8.2:+82424756 | None:intergenic |
| CCGTGATATTTGTCAGGAAG+TGG | 0.479675 | 8.2:+82424762 | None:intergenic |
| TAAGTAGGTGGCCGGCAGAT+TGG | 0.482101 | 8.2:+82420839 | None:intergenic |
| AGATATGTTTGGAAAGGCCC+TGG | 0.482975 | 8.2:-82421011 | MS.gene99165:CDS |
| AGTCTAAAACAAATGTAGGT+TGG | 0.484037 | 8.2:+82420577 | None:intergenic |
| ATTGTTGGACCTTGAGTACT+GGG | 0.484670 | 8.2:+82419399 | None:intergenic |
| CAATTCATTGAAATCGATCC+CGG | 0.486294 | 8.2:+82420951 | None:intergenic |
| CAAGCTACTCTGAGTACCCT+TGG | 0.488990 | 8.2:-82420904 | MS.gene99165:CDS |
| TGATCCTCCATTAGATCCAC+AGG | 0.489528 | 8.2:-82420202 | MS.gene99165:intron |
| TCAAGCCATGCGCTTGAAGA+AGG | 0.492044 | 8.2:-82427975 | MS.gene99165:intron |
| TGCATGGTCTCCCTCCTCCA+GGG | 0.495010 | 8.2:+82420994 | None:intergenic |
| AGAATTACGGCGGTTGCGAC+CGG | 0.496601 | 8.2:+82428039 | None:intergenic |
| GTTTGGAAAGGCCCTGGAGG+AGG | 0.505574 | 8.2:-82421005 | MS.gene99165:CDS |
| ATCGGAGGTGGAAGTGGTGG+AGG | 0.505995 | 8.2:+82428009 | None:intergenic |
| TTCTTTAACAAGATTGTGCA+TGG | 0.506016 | 8.2:+82420978 | None:intergenic |
| TTGTTCCACTCATAAGCATA+GGG | 0.506743 | 8.2:+82426810 | None:intergenic |
| TGTTATCAAGATTCTTTCCA+AGG | 0.509846 | 8.2:+82420887 | None:intergenic |
| TTATGTACCATTCCAGAAGC+TGG | 0.510329 | 8.2:+82419569 | None:intergenic |
| ATTGACTGATCCTATAGATC+AGG | 0.512443 | 8.2:-82420119 | MS.gene99165:intron |
| TGGAGGACGACGGAGAATTA+CGG | 0.514870 | 8.2:+82428026 | None:intergenic |
| TGACACTAAGAGACGATTCA+GGG | 0.517242 | 8.2:-82426653 | MS.gene99165:CDS |
| TCCGGAATTTACAACTATAG+AGG | 0.517384 | 8.2:-82421831 | MS.gene99165:intron |
| GTTTCAGCTCTATTGCGAAA+AGG | 0.520137 | 8.2:-82426457 | MS.gene99165:intron |
| GGGTAGTCTAAAACAAATGT+AGG | 0.521669 | 8.2:+82420573 | None:intergenic |
| AATAGACTCCCTATCGGAGG+TGG | 0.524551 | 8.2:+82427997 | None:intergenic |
| TTTGTTCCACTCATAAGCAT+AGG | 0.524967 | 8.2:+82426809 | None:intergenic |
| TGTCACGAATGGTCTAGCTT+CGG | 0.528109 | 8.2:+82422466 | None:intergenic |
| CACCACTTCCACCTCCGATA+GGG | 0.536439 | 8.2:-82428005 | MS.gene99165:CDS |
| CTGCGGTGTGGTTTAGCCAA+TGG | 0.537930 | 8.2:+82420537 | None:intergenic |
| CCACCACTTCCACCTCCGAT+AGG | 0.542347 | 8.2:-82428006 | MS.gene99165:CDS |
| AAAAGAAGGAATAGAAAATG+AGG | 0.543923 | 8.2:-82419654 | MS.gene99165:CDS |
| GCGGTTGCGACCGGAGGAGG+TGG | 0.544216 | 8.2:+82428048 | None:intergenic |
| TTCCATACTCCAAAGCCGTT+AGG | 0.545247 | 8.2:+82419597 | None:intergenic |
| CCCAATTGAGATATCTCCAT+TGG | 0.547983 | 8.2:-82420553 | MS.gene99165:CDS |
| TTTGGAAAGGCCCTGGAGGA+GGG | 0.552293 | 8.2:-82421004 | MS.gene99165:CDS |
| AAGTACCTTCTTCAAGCGCA+TGG | 0.553255 | 8.2:+82427970 | None:intergenic |
| CCAATGGAGATATCTCAATT+GGG | 0.556267 | 8.2:+82420553 | None:intergenic |
| GTTATCAAGATTCTTTCCAA+GGG | 0.558076 | 8.2:+82420888 | None:intergenic |
| TATAGGTTGTATCAGAGATA+CGG | 0.559036 | 8.2:-82423366 | MS.gene99165:intron |
| AACCTCGTTAAGTAGGTGGC+CGG | 0.559200 | 8.2:+82420831 | None:intergenic |
| AATGAAAAGTTCAAACCTCT+CGG | 0.565499 | 8.2:+82420174 | None:intergenic |
| ATTGAAGCATGCCAATCTGC+CGG | 0.566605 | 8.2:-82420850 | MS.gene99165:CDS |
| TTGCGGGAAGAATTGTTGCT+AGG | 0.568965 | 8.2:-82426701 | MS.gene99165:CDS |
| GCCAATCAACCTCGTTAAGT+AGG | 0.570615 | 8.2:+82420824 | None:intergenic |
| GAATGATCATGTATCTATTG+CGG | 0.573107 | 8.2:-82426718 | MS.gene99165:CDS |
| GCTATTACATCTCTAATGCT+GGG | 0.573314 | 8.2:+82419425 | None:intergenic |
| TGAAACTGTTGAACCTAACA+TGG | 0.574370 | 8.2:-82428153 | MS.gene99165:CDS |
| CCTATCGGAGGTGGAAGTGG+TGG | 0.578335 | 8.2:+82428006 | None:intergenic |
| GATCCACAGGTTTGACCGAG+AGG | 0.578678 | 8.2:-82420189 | MS.gene99165:CDS |
| GTTGAAGAACTTAGAAGCAA+GGG | 0.578950 | 8.2:-82426840 | MS.gene99165:CDS |
| GTGGAAGTGGTGGAGGACGA+CGG | 0.581495 | 8.2:+82428016 | None:intergenic |
| GGTGGTTGAATAAGAAGAAG+AGG | 0.585694 | 8.2:+82428066 | None:intergenic |
| GGTTGAAGAACTTAGAAGCA+AGG | 0.589657 | 8.2:-82426841 | MS.gene99165:CDS |
| AATAGCCTTCCCAGTACTCA+AGG | 0.592780 | 8.2:-82419408 | MS.gene99165:CDS |
| TTGGACCTTGAGTACTGGGA+AGG | 0.593720 | 8.2:+82419403 | None:intergenic |
| TGGAAAGAATCTTGATAACA+AGG | 0.594763 | 8.2:-82420884 | MS.gene99165:CDS |
| TCTTGACGATGATTTCCTAA+CGG | 0.595091 | 8.2:-82419612 | MS.gene99165:CDS |
| ATTACGGCGGTTGCGACCGG+AGG | 0.596381 | 8.2:+82428042 | None:intergenic |
| AAACCTCTCGGTCAAACCTG+TGG | 0.598156 | 8.2:+82420186 | None:intergenic |
| GTTGATATTGGTGATATACT+AGG | 0.599745 | 8.2:-82426396 | MS.gene99165:CDS |
| GAGTTGAGATATGTTTGGAA+AGG | 0.602646 | 8.2:-82421017 | MS.gene99165:CDS |
| AATGCCTCCAGCTTCTGGAA+TGG | 0.606421 | 8.2:-82419576 | MS.gene99165:intron |
| GGATTCTTTAGGTTTCGTTG+AGG | 0.620350 | 8.2:-82423335 | MS.gene99165:CDS |
| GGTGATATACTAGGTGCAAG+AGG | 0.623168 | 8.2:-82426387 | MS.gene99165:CDS |
| ATTGCACCTAAAGAGAATGC+TGG | 0.624253 | 8.2:-82422396 | MS.gene99165:intron |
| GCAGCTCTTTCAACAAATGG+TGG | 0.630345 | 8.2:-82419680 | MS.gene99165:CDS |
| GAATTGTGGTATGTCACGAA+TGG | 0.630545 | 8.2:+82422455 | None:intergenic |
| AATCAACCTCGTTAAGTAGG+TGG | 0.632135 | 8.2:+82420827 | None:intergenic |
| ATTGATTAGGGAGAAGCTGG+AGG | 0.632319 | 8.2:-82422491 | MS.gene99165:intron |
| AGTCTCTTCCAAGAGAATTG+TGG | 0.632957 | 8.2:+82422441 | None:intergenic |
| CCACTTCCTGACAAATATCA+CGG | 0.639790 | 8.2:-82424762 | MS.gene99165:CDS |
| ATCAGAGATACGGAGGACAA+TGG | 0.644056 | 8.2:-82423356 | MS.gene99165:CDS |
| GGCTTGAATAGACTCCCTAT+CGG | 0.647186 | 8.2:+82427991 | None:intergenic |
| CATTGGCTAAACCACACCGC+AGG | 0.647461 | 8.2:-82420536 | MS.gene99165:intron |
| TGAATTGGGAAATGATCTCG+AGG | 0.648978 | 8.2:-82420935 | MS.gene99165:CDS |
| AAGCATGATGAATTTAGCAG+AGG | 0.654036 | 8.2:-82421198 | MS.gene99165:CDS |
| TAGATATACGCTATCGCCAG+AGG | 0.655561 | 8.2:-82424728 | MS.gene99165:intron |
| GCGCGGATAAGAAGCGTGCG+AGG | 0.659601 | 8.2:+82428088 | None:intergenic |
| TTGAAGAACTTAGAAGCAAG+GGG | 0.664475 | 8.2:-82426839 | MS.gene99165:CDS |
| TGTGTTCCGCAAAAGAGCCA+AGG | 0.669538 | 8.2:-82424261 | MS.gene99165:intron |
| TTGAATAGACTCCCTATCGG+AGG | 0.675062 | 8.2:+82427994 | None:intergenic |
| TCGATCCCTATGCTTATGAG+TGG | 0.681810 | 8.2:-82426815 | MS.gene99165:CDS |
| TTGAATAAGAAGAAGAGGCG+CGG | 0.683601 | 8.2:+82428071 | None:intergenic |
| TGTACCATTCCAGAAGCTGG+AGG | 0.684157 | 8.2:+82419572 | None:intergenic |
| TGCCGGCCACCTACTTAACG+AGG | 0.691412 | 8.2:-82420833 | MS.gene99165:intron |
| TATGTTTGGAAAGGCCCTGG+AGG | 0.696991 | 8.2:-82421008 | MS.gene99165:CDS |
| AGATATGATTGCAAATCCAG+AGG | 0.699255 | 8.2:-82424291 | MS.gene99165:CDS |
| AGGTTGTATCAGAGATACGG+AGG | 0.705032 | 8.2:-82423363 | MS.gene99165:CDS |
| AAATGTGTATACCTGCGGTG+TGG | 0.776533 | 8.2:+82420525 | None:intergenic |
| AGGACGACGGAGAATTACGG+CGG | 0.797261 | 8.2:+82428029 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 82419397 | 82428188 | 82419397 | ID=MS.gene99165 |
| chr8.2 | mRNA | 82419397 | 82428188 | 82419397 | ID=MS.gene99165.t1;Parent=MS.gene99165 |
| chr8.2 | exon | 82427976 | 82428188 | 82427976 | ID=MS.gene99165.t1.exon1;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82427976 | 82428188 | 82427976 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82426644 | 82426862 | 82426644 | ID=MS.gene99165.t1.exon2;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82426644 | 82426862 | 82426644 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82426364 | 82426472 | 82426364 | ID=MS.gene99165.t1.exon3;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82426364 | 82426472 | 82426364 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82424729 | 82424837 | 82424729 | ID=MS.gene99165.t1.exon4;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82424729 | 82424837 | 82424729 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82424262 | 82424319 | 82424262 | ID=MS.gene99165.t1.exon5;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82424262 | 82424319 | 82424262 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82423315 | 82423383 | 82423315 | ID=MS.gene99165.t1.exon6;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82423315 | 82423383 | 82423315 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82422397 | 82422504 | 82422397 | ID=MS.gene99165.t1.exon7;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82422397 | 82422504 | 82422397 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82421832 | 82421924 | 82421832 | ID=MS.gene99165.t1.exon8;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82421832 | 82421924 | 82421832 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82421142 | 82421246 | 82421142 | ID=MS.gene99165.t1.exon9;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82421142 | 82421246 | 82421142 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82420834 | 82421040 | 82420834 | ID=MS.gene99165.t1.exon10;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82420834 | 82421040 | 82420834 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82420537 | 82420631 | 82420537 | ID=MS.gene99165.t1.exon11;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82420537 | 82420631 | 82420537 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82420120 | 82420210 | 82420120 | ID=MS.gene99165.t1.exon12;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82420120 | 82420210 | 82420120 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82419577 | 82419747 | 82419577 | ID=MS.gene99165.t1.exon13;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82419577 | 82419747 | 82419577 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| chr8.2 | exon | 82419397 | 82419489 | 82419397 | ID=MS.gene99165.t1.exon14;Parent=MS.gene99165.t1 |
| chr8.2 | CDS | 82419397 | 82419489 | 82419397 | ID=cds.MS.gene99165.t1;Parent=MS.gene99165.t1 |
| Gene Sequence |
| Protein sequence |
