Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003922.01.T01 | XP_003590556.1 | 86.316 | 95 | 0 | 2 | 1 | 95 | 1 | 82 | 7.23E-45 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003922.01.T01 | Q93V47 | 50.667 | 75 | 27 | 1 | 21 | 95 | 9 | 73 | 1.26E-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003922.01.T01 | G7ICP9 | 86.316 | 95 | 0 | 2 | 1 | 95 | 1 | 82 | 3.45e-45 | 150 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0180003922.01 | 0.833303 | 5.763083e-56 | 6.610407e-53 |
| MsG0080048383.01 | MsG0180003922.01 | 0.809221 | 2.106399e-50 | 1.229617e-47 |
| MsG0080048784.01 | MsG0180003922.01 | 0.808242 | 3.410144e-50 | 1.939903e-47 |
| MsG0080048856.01 | MsG0180003922.01 | 0.802807 | 4.707748e-49 | 2.328021e-46 |
| MsG0180000144.01 | MsG0180003922.01 | 0.807652 | 4.551755e-50 | 2.549360e-47 |
| MsG0180000334.01 | MsG0180003922.01 | 0.809514 | 1.822598e-50 | 1.072253e-47 |
| MsG0180000568.01 | MsG0180003922.01 | 0.815721 | 7.993893e-52 | 5.554705e-49 |
| MsG0180000806.01 | MsG0180003922.01 | 0.820760 | 5.784103e-53 | 4.617807e-50 |
| MsG0180000835.01 | MsG0180003922.01 | 0.823448 | 1.377870e-53 | 1.186675e-50 |
| MsG0180000836.01 | MsG0180003922.01 | 0.821329 | 4.279336e-53 | 3.471007e-50 |
| MsG0180001173.01 | MsG0180003922.01 | 0.800252 | 1.572868e-48 | 7.289147e-46 |
| MsG0180002492.01 | MsG0180003922.01 | 0.802066 | 6.692258e-49 | 3.247242e-46 |
| MsG0180002547.01 | MsG0180003922.01 | 0.833318 | 5.713821e-56 | 6.556945e-53 |
| MsG0180002664.01 | MsG0180003922.01 | 0.814076 | 1.852435e-51 | 1.230834e-48 |
| MsG0180002794.01 | MsG0180003922.01 | 0.842284 | 2.841228e-58 | 4.287121e-55 |
| MsG0180002992.01 | MsG0180003922.01 | 0.817508 | 3.179274e-52 | 2.319853e-49 |
| MsG0180003094.01 | MsG0180003922.01 | 0.805798 | 1.121497e-49 | 5.988656e-47 |
| MsG0180003572.01 | MsG0180003922.01 | 0.800663 | 1.297039e-48 | 6.073964e-46 |
| MsG0180003821.01 | MsG0180003922.01 | 0.806672 | 7.341680e-50 | 4.008578e-47 |
| MsG0180003885.01 | MsG0180003922.01 | 0.810046 | 1.400293e-50 | 8.354813e-48 |
| MsG0180003922.01 | MsG0180003932.01 | 0.938406 | 7.098377e-99 | 6.829425e-94 |
| MsG0180003922.01 | MsG0180004062.01 | 0.818535 | 1.863047e-52 | 1.398359e-49 |
| MsG0180003922.01 | MsG0180004160.01 | 0.816378 | 5.702560e-52 | 4.034196e-49 |
| MsG0180003922.01 | MsG0180004398.01 | 0.807995 | 3.849123e-50 | 2.175292e-47 |
| MsG0180003922.01 | MsG0180004481.01 | 0.816497 | 5.364879e-52 | 3.807372e-49 |
| MsG0180003922.01 | MsG0180004482.01 | 0.815901 | 7.290571e-52 | 5.090396e-49 |
| MsG0180003922.01 | MsG0180004493.01 | 0.824837 | 6.499373e-54 | 5.823807e-51 |
| MsG0180003922.01 | MsG0180004500.01 | 0.813951 | 1.973832e-51 | 1.307006e-48 |
| MsG0180003922.01 | MsG0180004861.01 | 0.800359 | 1.495867e-48 | 6.951342e-46 |
| MsG0180003922.01 | MsG0180005049.01 | 0.848658 | 5.325787e-60 | 9.843794e-57 |
| MsG0180003922.01 | MsG0180005153.01 | 0.813747 | 2.189007e-51 | 1.441488e-48 |
| MsG0180003922.01 | MsG0180005169.01 | 0.816971 | 4.200764e-52 | 3.020516e-49 |
| MsG0180003922.01 | MsG0180005575.01 | 0.822380 | 2.442826e-53 | 2.041459e-50 |
| MsG0180003922.01 | MsG0180006017.01 | 0.824720 | 6.927077e-54 | 6.186546e-51 |
| MsG0180003922.01 | MsG0180006025.01 | 0.804536 | 2.061137e-49 | 1.065370e-46 |
| MsG0180003922.01 | MsG0180006096.01 | 0.815877 | 7.380319e-52 | 5.149738e-49 |
| MsG0180003922.01 | MsG0180006104.01 | 0.802043 | 6.764623e-49 | 3.280440e-46 |
| MsG0180003922.01 | MsG0280006545.01 | 0.825576 | 4.347697e-54 | 3.978330e-51 |
| MsG0180003922.01 | MsG0280006679.01 | 0.810696 | 1.013661e-50 | 6.152694e-48 |
| MsG0180003922.01 | MsG0280006852.01 | 0.814381 | 1.585649e-51 | 1.062383e-48 |
| MsG0180003922.01 | MsG0280006993.01 | 0.802889 | 4.528784e-49 | 2.244069e-46 |
| MsG0180003922.01 | MsG0280007440.01 | 0.807344 | 5.293143e-50 | 2.940968e-47 |
| MsG0180003922.01 | MsG0280007527.01 | 0.850458 | 1.675829e-60 | 3.284840e-57 |
| MsG0180003922.01 | MsG0280007847.01 | 0.823587 | 1.278309e-53 | 1.105329e-50 |
| MsG0180003922.01 | MsG0280007903.01 | 0.806950 | 6.411375e-50 | 3.526048e-47 |
| MsG0180003922.01 | MsG0280008378.01 | 0.801252 | 9.831172e-49 | 4.673055e-46 |
| MsG0180003922.01 | MsG0280008429.01 | 0.813990 | 1.934530e-51 | 1.282347e-48 |
| MsG0180003922.01 | MsG0280008738.01 | 0.822945 | 1.805315e-53 | 1.532990e-50 |
| MsG0180003922.01 | MsG0280009141.01 | 0.816698 | 4.836074e-52 | 3.451120e-49 |
| MsG0180003922.01 | MsG0280009575.01 | 0.820641 | 6.162282e-53 | 4.902898e-50 |
| MsG0180003922.01 | MsG0280010082.01 | 0.803786 | 2.952714e-49 | 1.497152e-46 |
| MsG0180003922.01 | MsG0280010184.01 | 0.836398 | 9.580004e-57 | 1.205824e-53 |
| MsG0180003922.01 | MsG0280010776.01 | 0.818116 | 2.318358e-52 | 1.720029e-49 |
| MsG0180003922.01 | MsG0280010778.01 | 0.803313 | 3.699968e-49 | 1.853292e-46 |
| MsG0180003922.01 | MsG0380011581.01 | 0.829071 | 6.320219e-55 | 6.398779e-52 |
| MsG0180003922.01 | MsG0380011614.01 | 0.800103 | 1.686294e-48 | 7.785313e-46 |
| MsG0180003922.01 | MsG0380011927.01 | 0.807258 | 5.519539e-50 | 3.059928e-47 |
| MsG0180003922.01 | MsG0380012067.01 | 0.803619 | 3.197669e-49 | 1.614389e-46 |
| MsG0180003922.01 | MsG0380012371.01 | 0.805705 | 1.173219e-49 | 6.250201e-47 |
| MsG0180003922.01 | MsG0380012570.01 | 0.804377 | 2.224655e-49 | 1.145243e-46 |
| MsG0180003922.01 | MsG0380013085.01 | 0.832289 | 1.029410e-55 | 1.145362e-52 |
| MsG0180003922.01 | MsG0380013183.01 | 0.839493 | 1.533027e-57 | 2.120737e-54 |
| MsG0180003922.01 | MsG0380014175.01 | 0.827298 | 1.689697e-54 | 1.624699e-51 |
| MsG0180003922.01 | MsG0380014875.01 | 0.807667 | 4.518613e-50 | 2.531801e-47 |
| MsG0180003922.01 | MsG0380015332.01 | 0.816445 | 5.509664e-52 | 3.904552e-49 |
| MsG0180003922.01 | MsG0380015435.01 | 0.827496 | 1.515284e-54 | 1.465330e-51 |
| MsG0180003922.01 | MsG0380016005.01 | 0.844207 | 8.721243e-59 | 1.397907e-55 |
| MsG0180003922.01 | MsG0380016247.01 | 0.810306 | 1.231037e-50 | 7.394337e-48 |
| MsG0180003922.01 | MsG0380016290.01 | 0.820648 | 6.137691e-53 | 4.884376e-50 |
| MsG0180003922.01 | MsG0380016347.01 | -0.812192 | 4.798361e-51 | 3.030813e-48 |
| MsG0180003922.01 | MsG0380016505.01 | 0.838569 | 2.660093e-57 | 3.577223e-54 |
| MsG0180003922.01 | MsG0380016671.01 | 0.818521 | 1.876576e-52 | 1.407964e-49 |
| MsG0180003922.01 | MsG0380016970.01 | 0.812138 | 4.930723e-51 | 3.109751e-48 |
| MsG0180003922.01 | MsG0380017433.01 | 0.818111 | 2.324744e-52 | 1.724496e-49 |
| MsG0180003922.01 | MsG0380017589.01 | 0.802741 | 4.857981e-49 | 2.398189e-46 |
| MsG0180003922.01 | MsG0380018033.01 | 0.851019 | 1.165072e-60 | 2.326214e-57 |
| MsG0180003922.01 | MsG0480018235.01 | 0.820448 | 6.823339e-53 | 5.400537e-50 |
| MsG0180003922.01 | MsG0480018278.01 | 0.843649 | 1.230429e-58 | 1.938147e-55 |
| MsG0180003922.01 | MsG0480018292.01 | 0.813046 | 3.120529e-51 | 2.016185e-48 |
| MsG0180003922.01 | MsG0480018911.01 | 0.803824 | 2.899170e-49 | 1.471431e-46 |
| MsG0180003922.01 | MsG0480019148.01 | 0.808873 | 2.500036e-50 | 1.445810e-47 |
| MsG0180003922.01 | MsG0480019380.01 | 0.816470 | 5.438276e-52 | 3.856756e-49 |
| MsG0180003922.01 | MsG0480019711.01 | 0.803712 | 3.058802e-49 | 1.547906e-46 |
| MsG0180003922.01 | MsG0480020675.01 | 0.800048 | 1.729911e-48 | 7.975571e-46 |
| MsG0180003922.01 | MsG0480020780.01 | 0.840321 | 9.331398e-58 | 1.324247e-54 |
| MsG0180003922.01 | MsG0480020879.01 | 0.808626 | 2.823623e-50 | 1.622345e-47 |
| MsG0180003922.01 | MsG0480021037.01 | 0.813027 | 3.150610e-51 | 2.034613e-48 |
| MsG0180003922.01 | MsG0480021056.01 | 0.824397 | 8.253811e-54 | 7.301825e-51 |
| MsG0180003922.01 | MsG0480021195.01 | 0.806405 | 8.359118e-50 | 4.533162e-47 |
| MsG0180003922.01 | MsG0480021706.01 | 0.808688 | 2.739029e-50 | 1.576293e-47 |
| MsG0180003922.01 | MsG0480021735.01 | 0.813427 | 2.573707e-51 | 1.680253e-48 |
| MsG0180003922.01 | MsG0480021870.01 | 0.824128 | 9.545555e-54 | 8.380565e-51 |
| MsG0180003922.01 | MsG0480022054.01 | 0.808132 | 3.598629e-50 | 2.041119e-47 |
| MsG0180003922.01 | MsG0480022223.01 | 0.808625 | 2.825236e-50 | 1.623213e-47 |
| MsG0180003922.01 | MsG0480022514.01 | 0.843288 | 1.536958e-58 | 2.393474e-55 |
| MsG0180003922.01 | MsG0480022586.01 | 0.802023 | 6.829481e-49 | 3.310183e-46 |
| MsG0180003922.01 | MsG0480022672.01 | 0.823816 | 1.130044e-53 | 9.835325e-51 |
| MsG0180003922.01 | MsG0480022696.01 | 0.801922 | 7.163099e-49 | 3.462979e-46 |
| MsG0180003922.01 | MsG0480022711.01 | 0.809295 | 2.030446e-50 | 1.187622e-47 |
| MsG0180003922.01 | MsG0480022780.01 | 0.819349 | 1.216787e-52 | 9.339499e-50 |
| MsG0180003922.01 | MsG0480022825.01 | 0.801964 | 7.023103e-49 | 3.398786e-46 |
| MsG0180003922.01 | MsG0480022960.01 | 0.805543 | 1.268793e-49 | 6.730520e-47 |
| MsG0180003922.01 | MsG0480023055.01 | 0.836457 | 9.254126e-57 | 1.166908e-53 |
| MsG0180003922.01 | MsG0480023172.01 | 0.813140 | 2.975249e-51 | 1.927156e-48 |
| MsG0180003922.01 | MsG0480023221.01 | 0.846833 | 1.694004e-59 | 2.953156e-56 |
| MsG0180003922.01 | MsG0480023272.01 | 0.821368 | 4.189902e-53 | 3.402074e-50 |
| MsG0180003922.01 | MsG0480023384.01 | 0.801355 | 9.362477e-49 | 4.461919e-46 |
| MsG0180003922.01 | MsG0480023387.01 | 0.812778 | 3.573157e-51 | 2.292158e-48 |
| MsG0180003922.01 | MsG0480023463.01 | 0.815315 | 9.845547e-52 | 6.765112e-49 |
| MsG0180003922.01 | MsG0580024197.01 | 0.814160 | 1.774980e-51 | 1.182027e-48 |
| MsG0180003922.01 | MsG0580024619.01 | 0.808162 | 3.545559e-50 | 2.012719e-47 |
| MsG0180003922.01 | MsG0580024727.01 | 0.833420 | 5.388705e-56 | 6.202585e-53 |
| MsG0180003922.01 | MsG0580025131.01 | 0.817489 | 3.211110e-52 | 2.341846e-49 |
| MsG0180003922.01 | MsG0580025268.01 | 0.827446 | 1.557440e-54 | 1.504002e-51 |
| MsG0180003922.01 | MsG0580025332.01 | 0.802298 | 5.994210e-49 | 2.925979e-46 |
| MsG0180003922.01 | MsG0580025439.01 | 0.824839 | 6.494162e-54 | 5.819366e-51 |
| MsG0180003922.01 | MsG0580025458.01 | 0.800402 | 1.465870e-48 | 6.819329e-46 |
| MsG0180003922.01 | MsG0580025460.01 | 0.808842 | 2.538536e-50 | 1.466874e-47 |
| MsG0180003922.01 | MsG0580025587.01 | 0.809928 | 1.484703e-50 | 8.830871e-48 |
| MsG0180003922.01 | MsG0580025651.01 | 0.810071 | 1.382900e-50 | 8.256199e-48 |
| MsG0180003922.01 | MsG0580025661.01 | 0.831756 | 1.394039e-55 | 1.527286e-52 |
| MsG0180003922.01 | MsG0580025816.01 | 0.822499 | 2.292620e-53 | 1.922325e-50 |
| MsG0180003922.01 | MsG0580025986.01 | 0.803273 | 3.771780e-49 | 1.887336e-46 |
| MsG0180003922.01 | MsG0580026485.01 | 0.801101 | 1.055523e-48 | 4.998438e-46 |
| MsG0180003922.01 | MsG0580027136.01 | 0.808829 | 2.554882e-50 | 1.475813e-47 |
| MsG0180003922.01 | MsG0580027361.01 | 0.800115 | 1.676376e-48 | 7.741928e-46 |
| MsG0180003922.01 | MsG0580027650.01 | 0.805563 | 1.256582e-49 | 6.669186e-47 |
| MsG0180003922.01 | MsG0580028094.01 | 0.800652 | 1.303313e-48 | 6.101790e-46 |
| MsG0180003922.01 | MsG0580028582.01 | 0.851593 | 8.020596e-61 | 1.631457e-57 |
| MsG0180003922.01 | MsG0580028597.01 | 0.817079 | 3.972251e-52 | 2.864431e-49 |
| MsG0180003922.01 | MsG0580028630.01 | 0.800858 | 1.183122e-48 | 5.568178e-46 |
| MsG0180003922.01 | MsG0580029236.01 | 0.825762 | 3.926858e-54 | 3.612587e-51 |
| MsG0180003922.01 | MsG0580029647.01 | 0.805785 | 1.128544e-49 | 6.024304e-47 |
| MsG0180003922.01 | MsG0580029736.01 | 0.829684 | 4.486032e-55 | 4.624773e-52 |
| MsG0180003922.01 | MsG0580029919.01 | 0.834233 | 3.374980e-56 | 3.980321e-53 |
| MsG0180003922.01 | MsG0580030010.01 | 0.809877 | 1.522530e-50 | 9.043802e-48 |
| MsG0180003922.01 | MsG0680030350.01 | 0.824375 | 8.351651e-54 | 7.383884e-51 |
| MsG0180003922.01 | MsG0680031000.01 | 0.801414 | 9.104581e-49 | 4.345385e-46 |
| MsG0180003922.01 | MsG0680031507.01 | 0.818232 | 2.182764e-52 | 1.624516e-49 |
| MsG0180003922.01 | MsG0680031621.01 | 0.808250 | 3.395859e-50 | 1.932228e-47 |
| MsG0180003922.01 | MsG0680031628.01 | 0.807369 | 5.226987e-50 | 2.906101e-47 |
| MsG0180003922.01 | MsG0680031699.01 | 0.814311 | 1.643617e-51 | 1.099107e-48 |
| MsG0180003922.01 | MsG0680033392.01 | 0.805839 | 1.099521e-49 | 5.877502e-47 |
| MsG0180003922.01 | MsG0680035306.01 | 0.811359 | 7.283377e-51 | 4.498831e-48 |
| MsG0180003922.01 | MsG0680035577.01 | 0.804210 | 2.409600e-49 | 1.235107e-46 |
| MsG0180003922.01 | MsG0680035876.01 | 0.810710 | 1.006742e-50 | 6.112961e-48 |
| MsG0180003922.01 | MsG0680035877.01 | 0.808692 | 2.733940e-50 | 1.573530e-47 |
| MsG0180003922.01 | MsG0680035888.01 | 0.864152 | 1.493769e-64 | 4.642543e-61 |
| MsG0180003922.01 | MsG0780035937.01 | 0.845210 | 4.680706e-59 | 7.743551e-56 |
| MsG0180003922.01 | MsG0780036186.01 | 0.821657 | 3.594486e-53 | 2.942307e-50 |
| MsG0180003922.01 | MsG0780036659.01 | 0.825160 | 5.454988e-54 | 4.933195e-51 |
| MsG0180003922.01 | MsG0780037054.01 | 0.811974 | 5.351182e-51 | 3.359958e-48 |
| MsG0180003922.01 | MsG0780037093.01 | 0.834290 | 3.265296e-56 | 3.858038e-53 |
| MsG0180003922.01 | MsG0780037123.01 | 0.803980 | 2.690967e-49 | 1.371306e-46 |
| MsG0180003922.01 | MsG0780037240.01 | 0.820451 | 6.811366e-53 | 5.391744e-50 |
| MsG0180003922.01 | MsG0780038400.01 | 0.805567 | 1.254206e-49 | 6.657257e-47 |
| MsG0180003922.01 | MsG0780038603.01 | 0.821647 | 3.612133e-53 | 2.955977e-50 |
| MsG0180003922.01 | MsG0780039170.01 | 0.834023 | 3.807818e-56 | 4.462860e-53 |
| MsG0180003922.01 | MsG0780039369.01 | 0.820013 | 8.581408e-53 | 6.710897e-50 |
| MsG0180003922.01 | MsG0780039443.01 | 0.816724 | 4.772496e-52 | 3.408204e-49 |
| MsG0180003922.01 | MsG0780040569.01 | 0.801567 | 8.472664e-49 | 4.059361e-46 |
| MsG0180003922.01 | MsG0780041016.01 | 0.800520 | 1.386883e-48 | 6.471126e-46 |
| MsG0180003922.01 | MsG0780041127.01 | 0.808573 | 2.898043e-50 | 1.662864e-47 |
| MsG0180003922.01 | MsG0780041258.01 | 0.806730 | 7.136380e-50 | 3.902539e-47 |
| MsG0180003922.01 | MsG0780041268.01 | 0.830819 | 2.368468e-55 | 2.523552e-52 |
| MsG0180003922.01 | MsG0780041391.01 | 0.812190 | 4.801399e-51 | 3.032618e-48 |
| MsG0180003922.01 | MsG0780041435.01 | 0.822412 | 2.401880e-53 | 2.009006e-50 |
| MsG0180003922.01 | MsG0780041440.01 | 0.842159 | 3.065775e-58 | 4.607450e-55 |
| MsG0180003922.01 | MsG0780041482.01 | 0.811074 | 8.396406e-51 | 5.147838e-48 |
| MsG0180003922.01 | MsG0880042033.01 | 0.827374 | 1.621073e-54 | 1.562298e-51 |
| MsG0180003922.01 | MsG0880042128.01 | 0.809858 | 1.536853e-50 | 9.124303e-48 |
| MsG0180003922.01 | MsG0880042324.01 | 0.844893 | 5.701931e-59 | 9.337779e-56 |
| MsG0180003922.01 | MsG0880042519.01 | 0.815940 | 7.145727e-52 | 4.994671e-49 |
| MsG0180003922.01 | MsG0880042760.01 | 0.810249 | 1.266193e-50 | 7.594557e-48 |
| MsG0180003922.01 | MsG0880042795.01 | 0.832881 | 7.339796e-56 | 8.312778e-53 |
| MsG0180003922.01 | MsG0880042991.01 | 0.819322 | 1.234445e-52 | 9.467850e-50 |
| MsG0180003922.01 | MsG0880044131.01 | 0.802994 | 4.306618e-49 | 2.139576e-46 |
| MsG0180003922.01 | MsG0880044975.01 | 0.822805 | 1.946249e-53 | 1.646088e-50 |
| MsG0180003922.01 | MsG0880045145.01 | 0.806172 | 9.359147e-50 | 5.045694e-47 |
| MsG0180003922.01 | MsG0880045294.01 | 0.820471 | 6.741616e-53 | 5.339230e-50 |
| MsG0180003922.01 | MsG0880045460.01 | 0.801436 | 9.013108e-49 | 4.304092e-46 |
| MsG0180003922.01 | MsG0880045656.01 | 0.834363 | 3.130865e-56 | 3.707185e-53 |
| MsG0180003922.01 | MsG0880045684.01 | 0.829780 | 4.250270e-55 | 4.394294e-52 |
| MsG0180003922.01 | MsG0880046517.01 | 0.802624 | 5.136134e-49 | 2.527866e-46 |
| MsG0180003922.01 | MsG0880046790.01 | 0.800037 | 1.738808e-48 | 8.014389e-46 |
| MsG0180003922.01 | MsG0880047212.01 | 0.813295 | 2.751612e-51 | 1.789909e-48 |
| MsG0180003922.01 | MsG0880047470.01 | 0.825128 | 5.548515e-54 | 5.013215e-51 |
| MsG0180003922.01 | MsG0880047472.01 | 0.814377 | 1.589475e-51 | 1.064775e-48 |
| MsG0180003922.01 | MsG0880047473.01 | 0.806968 | 6.356955e-50 | 3.497723e-47 |
| MsG0180003922.01 | MsG0880047696.01 | 0.812882 | 3.389175e-51 | 2.180228e-48 |
| MsG0180003922.01 | MsG0880047743.01 | 0.806787 | 6.943478e-50 | 3.802473e-47 |
| MsG0180003922.01 | MsG0880047764.01 | 0.802036 | 6.788478e-49 | 3.291398e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003922.01.T01 | MTR_1g071100 | 86.316 | 95 | 0 | 2 | 1 | 95 | 1 | 82 | 8.75e-49 | 150 |
| MsG0180003922.01.T01 | MTR_1g076580 | 43.820 | 89 | 37 | 2 | 6 | 94 | 5 | 80 | 6.04e-13 | 59.3 |
| MsG0180003922.01.T01 | MTR_1g076580 | 43.820 | 89 | 37 | 2 | 6 | 94 | 5 | 80 | 8.29e-13 | 58.5 |
| MsG0180003922.01.T01 | MTR_1g076640 | 49.254 | 67 | 24 | 1 | 28 | 94 | 24 | 80 | 1.28e-11 | 55.8 |
| MsG0180003922.01.T01 | MTR_1g076640 | 49.254 | 67 | 24 | 1 | 28 | 94 | 24 | 80 | 6.17e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003922.01.T01 | AT3G22942 | 50.667 | 75 | 27 | 1 | 21 | 95 | 9 | 73 | 1.29e-13 | 61.2 |
| MsG0180003922.01.T01 | AT3G63420 | 41.463 | 82 | 34 | 2 | 13 | 94 | 3 | 70 | 2.57e-13 | 60.5 |
| MsG0180003922.01.T01 | AT3G63420 | 41.463 | 82 | 34 | 2 | 13 | 94 | 3 | 70 | 2.57e-13 | 60.5 |
| MsG0180003922.01.T01 | AT3G63420 | 41.463 | 82 | 34 | 2 | 13 | 94 | 43 | 110 | 5.00e-13 | 60.8 |
Find 22 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTTGTGCATAGAAATT+AGG | 0.242160 | 1:+70227939 | None:intergenic |
| ATTCGATTTCAATTTCAAAT+TGG | 0.260286 | 1:+70228079 | None:intergenic |
| ACAAGATACTAAATTTCTTC+AGG | 0.319990 | 1:-70227673 | MsG0180003922.01.T01:intron |
| TGAATGTATTCAGGAAGAAT+TGG | 0.367884 | 1:-70225808 | MsG0180003922.01.T01:intron |
| AGTGCGCACCGCAGCGTTGT+AGG | 0.370369 | 1:-70228055 | MsG0180003922.01.T01:five_prime_UTR |
| ATTGTATATTTAGTGTGTTA+TGG | 0.381559 | 1:-70227826 | MsG0180003922.01.T01:exon |
| AGAAATTACTCTGGGATTAG+TGG | 0.405087 | 1:+70225066 | None:intergenic |
| GTGTGTTATGGCGTCTGAAA+CGG | 0.409047 | 1:-70227814 | MsG0180003922.01.T01:exon |
| TACTCTGGGATTAGTGGATC+AGG | 0.437858 | 1:+70225072 | None:intergenic |
| AATTTCTATGCACAAGTAAA+CGG | 0.465730 | 1:-70227936 | MsG0180003922.01.T01:five_prime_UTR |
| GTGCGCACCGCAGCGTTGTA+GGG | 0.504250 | 1:-70228054 | MsG0180003922.01.T01:five_prime_UTR |
| GTTTCAGCTGCTGTAGCTGA+TGG | 0.513520 | 1:-70227750 | MsG0180003922.01.T01:CDS |
| AAATTATATTATGCATATCA+AGG | 0.514472 | 1:+70228107 | None:intergenic |
| GTCTGAAACGGCGTCGTCTG+CGG | 0.528907 | 1:-70227802 | MsG0180003922.01.T01:CDS |
| GTAGGTAAGAGAAATTACTC+TGG | 0.546899 | 1:+70225057 | None:intergenic |
| CAGCTGAAACAGAGACAACA+AGG | 0.554529 | 1:+70227763 | None:intergenic |
| GCGCAGATTGCTACAAAACA+TGG | 0.600608 | 1:-70225103 | MsG0180003922.01.T01:CDS |
| TAGGTAAGAGAAATTACTCT+GGG | 0.603337 | 1:+70225058 | None:intergenic |
| GATGGTGCGACTGATAAAAG+AGG | 0.615976 | 1:-70227732 | MsG0180003922.01.T01:CDS |
| AAATGTGTCGGCTATATGCA+AGG | 0.619090 | 1:-70225766 | MsG0180003922.01.T01:CDS |
| CGAGAAAACAGAAAATGTGT+CGG | 0.640254 | 1:-70225778 | MsG0180003922.01.T01:CDS |
| AGCTGAAACAGAGACAACAA+GGG | 0.753283 | 1:+70227764 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTATTCTTCAAAA+AGG | + | Chr1:70225216-70225235 | None:intergenic | 10.0% |
| !!! | TAAAGAATTTTATTTTTATC+AGG | + | Chr1:70225906-70225925 | None:intergenic | 10.0% |
| !! | AAAAAACACATAAATACTAT+GGG | + | Chr1:70226425-70226444 | None:intergenic | 15.0% |
| !! | AAATAAAAATAGATACTGTT+CGG | + | Chr1:70227663-70227682 | None:intergenic | 15.0% |
| !! | AAATTATATTATGCATATCA+AGG | + | Chr1:70225117-70225136 | None:intergenic | 15.0% |
| !! | AATTCAAAATAAACTTATAG+CGG | - | Chr1:70227106-70227125 | MsG0180003922.01.T01:intron | 15.0% |
| !! | ATCAAAAAAGAAAAAATGTA+TGG | + | Chr1:70227200-70227219 | None:intergenic | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | + | Chr1:70227870-70227889 | None:intergenic | 15.0% |
| !! | AATTAGGAAGAAAAGAAAAA+AGG | + | Chr1:70225269-70225288 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAACCCAAAT+TGG | + | Chr1:70226111-70226130 | None:intergenic | 20.0% |
| !! | ACTAAAGATCATAAATTCAA+AGG | + | Chr1:70226480-70226499 | None:intergenic | 20.0% |
| !! | ATTCGATTTCAATTTCAAAT+TGG | + | Chr1:70225145-70225164 | None:intergenic | 20.0% |
| !! | ATTGTATATTTAGTGTGTTA+TGG | - | Chr1:70225395-70225414 | MsG0180003922.01.T01:intron | 20.0% |
| !! | CAAAAAACACATAAATACTA+TGG | + | Chr1:70226426-70226445 | None:intergenic | 20.0% |
| !! | GATAAATTACAAAACAATGT+GGG | - | Chr1:70226536-70226555 | MsG0180003922.01.T01:intron | 20.0% |
| !! | GTGTATAATGTATAACTAAA+GGG | - | Chr1:70225612-70225631 | MsG0180003922.01.T01:intron | 20.0% |
| !! | TAATTGCTTAAATCAATGTT+AGG | - | Chr1:70227271-70227290 | MsG0180003922.01.T01:intron | 20.0% |
| !! | TGATAAATTACAAAACAATG+TGG | - | Chr1:70226535-70226554 | MsG0180003922.01.T01:intron | 20.0% |
| !! | TGTGATATTAAGTAAAAAGT+GGG | - | Chr1:70225337-70225356 | MsG0180003922.01.T01:intron | 20.0% |
| !! | TGTGTATAATGTATAACTAA+AGG | - | Chr1:70225611-70225630 | MsG0180003922.01.T01:intron | 20.0% |
| !! | TTTATAGCTTAAGCTTATAT+TGG | - | Chr1:70226643-70226662 | MsG0180003922.01.T01:intron | 20.0% |
| !!! | ACTTGAGAGTTTTATTTTTT+TGG | + | Chr1:70227782-70227801 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | + | Chr1:70227869-70227888 | None:intergenic | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | + | Chr1:70227875-70227894 | None:intergenic | 20.0% |
| !!! | GAACAGTATCTATTTTTATT+TGG | - | Chr1:70227662-70227681 | MsG0180003922.01.T01:intron | 20.0% |
| !!! | GTTTTTTTTATAAAAACGAC+CGG | - | Chr1:70225981-70226000 | MsG0180003922.01.T01:intron | 20.0% |
| !!! | TTGTAATTTTCTACTTAGTT+TGG | - | Chr1:70226220-70226239 | MsG0180003922.01.T01:intron | 20.0% |
| !!! | TTTTAACAGAAGCTAATTAT+AGG | + | Chr1:70227334-70227353 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAAGAGATTAGAT+GGG | - | Chr1:70226123-70226142 | MsG0180003922.01.T01:intron | 20.0% |
| !!! | TTTTTTTGTAAGAGATTAGA+TGG | - | Chr1:70226122-70226141 | MsG0180003922.01.T01:intron | 20.0% |
| ! | AACAATCATGCATCAAAATT+GGG | + | Chr1:70226584-70226603 | None:intergenic | 25.0% |
| ! | AATTTCTATGCACAAGTAAA+CGG | - | Chr1:70225285-70225304 | MsG0180003922.01.T01:intron | 25.0% |
| ! | ACAACTCTAACAAAAAAACT+AGG | + | Chr1:70228020-70228039 | None:intergenic | 25.0% |
| ! | ACAAGATACTAAATTTCTTC+AGG | - | Chr1:70225548-70225567 | MsG0180003922.01.T01:intron | 25.0% |
| ! | ATTTCCTTCCAAAGTATATA+TGG | - | Chr1:70226816-70226835 | MsG0180003922.01.T01:intron | 25.0% |
| ! | CATTCAATAACTCATGTATT+TGG | + | Chr1:70225944-70225963 | None:intergenic | 25.0% |
| ! | CTGATATAGATAATACTTGT+TGG | - | Chr1:70227947-70227966 | MsG0180003922.01.T01:five_prime_UTR | 25.0% |
| ! | GTGATATTAAGTAAAAAGTG+GGG | - | Chr1:70225338-70225357 | MsG0180003922.01.T01:intron | 25.0% |
| ! | GTGTGATATTAAGTAAAAAG+TGG | - | Chr1:70225336-70225355 | MsG0180003922.01.T01:intron | 25.0% |
| ! | TATATATGGAAAGTTGAAAC+CGG | - | Chr1:70226830-70226849 | MsG0180003922.01.T01:intron | 25.0% |
| ! | TCAACTTTCCATATATACTT+TGG | + | Chr1:70226827-70226846 | None:intergenic | 25.0% |
| ! | TCTAACAAAAAAACTAGGAT+TGG | + | Chr1:70228015-70228034 | None:intergenic | 25.0% |
| ! | TCTCCAATTTGAAAATGTTA+GGG | + | Chr1:70226024-70226043 | None:intergenic | 25.0% |
| ! | TGACTGAAGTAAAGAAAAAA+GGG | - | Chr1:70225240-70225259 | MsG0180003922.01.T01:intron | 25.0% |
| ! | TGATATTAAGTAAAAAGTGG+GGG | - | Chr1:70225339-70225358 | MsG0180003922.01.T01:intron | 25.0% |
| ! | TTAAGCTTATATTGGAATGT+TGG | - | Chr1:70226651-70226670 | MsG0180003922.01.T01:intron | 25.0% |
| ! | TTCTCCAATTTGAAAATGTT+AGG | + | Chr1:70226025-70226044 | None:intergenic | 25.0% |
| ! | TTTACTTGTGCATAGAAATT+AGG | + | Chr1:70225285-70225304 | None:intergenic | 25.0% |
| !! | AAGGCTTAAACAATTTTACT+TGG | - | Chr1:70228091-70228110 | MsG0180003922.01.T01:five_prime_UTR | 25.0% |
| !! | AATTAGCTTCTGTTAAAAGT+TGG | - | Chr1:70227336-70227355 | MsG0180003922.01.T01:intron | 25.0% |
| !! | ATAGATAATACTTGTTGGAT+TGG | - | Chr1:70227952-70227971 | MsG0180003922.01.T01:five_prime_UTR | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | + | Chr1:70227739-70227758 | None:intergenic | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | - | Chr1:70227750-70227769 | MsG0180003922.01.T01:CDS | 25.0% |
| !! | TATATTGGAATGTTGGTTAA+CGG | - | Chr1:70226658-70226677 | MsG0180003922.01.T01:intron | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | - | Chr1:70227751-70227770 | MsG0180003922.01.T01:CDS | 25.0% |
| !! | TTTTTGTAAGAGATTAGATG+GGG | - | Chr1:70226124-70226143 | MsG0180003922.01.T01:intron | 25.0% |
| !!! | TCTTTGCTCTAGATTTTATA+TGG | - | Chr1:70226178-70226197 | MsG0180003922.01.T01:intron | 25.0% |
| !!! | TTTTTTTCCTGAATGTATTC+AGG | - | Chr1:70227404-70227423 | MsG0180003922.01.T01:intron | 25.0% |
| AAAACTGTTAGGAACCAATT+TGG | - | Chr1:70226094-70226113 | MsG0180003922.01.T01:intron | 30.0% | |
| AAACTGTTAGGAACCAATTT+GGG | - | Chr1:70226095-70226114 | MsG0180003922.01.T01:intron | 30.0% | |
| AATAGACCAACAAATTTGTG+TGG | + | Chr1:70226258-70226277 | None:intergenic | 30.0% | |
| AATATTGTGAGGAACCAAAA+TGG | - | Chr1:70226154-70226173 | MsG0180003922.01.T01:intron | 30.0% | |
| AATTCTTCCTGAATACATTC+AGG | + | Chr1:70227414-70227433 | None:intergenic | 30.0% | |
| ACAACACATTGTACTAAATC+GGG | + | Chr1:70226935-70226954 | None:intergenic | 30.0% | |
| ACTAACAACCTATGATGTAT+AGG | + | Chr1:70227919-70227938 | None:intergenic | 30.0% | |
| AGTTGATCTGATAATTGGTT+TGG | - | Chr1:70226754-70226773 | MsG0180003922.01.T01:intron | 30.0% | |
| ATATTGTGAGGAACCAAAAT+GGG | - | Chr1:70226155-70226174 | MsG0180003922.01.T01:intron | 30.0% | |
| CAACAATCATGCATCAAAAT+TGG | + | Chr1:70226585-70226604 | None:intergenic | 30.0% | |
| CTTTCCATATATACTTTGGA+AGG | + | Chr1:70226823-70226842 | None:intergenic | 30.0% | |
| GAAACACATATTGAACCATA+TGG | - | Chr1:70227035-70227054 | MsG0180003922.01.T01:intron | 30.0% | |
| GACAACACATTGTACTAAAT+CGG | + | Chr1:70226936-70226955 | None:intergenic | 30.0% | |
| GTGACTGAAGTAAAGAAAAA+AGG | - | Chr1:70225239-70225258 | MsG0180003922.01.T01:intron | 30.0% | |
| TAGGAAGAAAAGAAAAAAGG+AGG | + | Chr1:70225266-70225285 | None:intergenic | 30.0% | |
| TCAGGAAATAAATTGTACCA+CGG | + | Chr1:70225888-70225907 | None:intergenic | 30.0% | |
| TCTCAAATTATTAACGACGT+CGG | + | Chr1:70225747-70225766 | None:intergenic | 30.0% | |
| TGAATGTATTCAGGAAGAAT+TGG | - | Chr1:70227413-70227432 | MsG0180003922.01.T01:intron | 30.0% | |
| TGCTTATTGTTTACAACAGA+AGG | + | Chr1:70226453-70226472 | None:intergenic | 30.0% | |
| TTAATGCCACACAAATTTGT+TGG | - | Chr1:70226249-70226268 | MsG0180003922.01.T01:intron | 30.0% | |
| TTGTGCTACAATATGCTATA+AGG | - | Chr1:70228072-70228091 | MsG0180003922.01.T01:five_prime_UTR | 30.0% | |
| ! | AGTCCCTAACATTTTCAAAT+TGG | - | Chr1:70226018-70226037 | MsG0180003922.01.T01:intron | 30.0% |
| ! | ATATGGTGTTTCTTGTTTCT+AGG | - | Chr1:70226195-70226214 | MsG0180003922.01.T01:intron | 30.0% |
| ! | ATCGAAGTTGATCTGATAAT+TGG | - | Chr1:70226749-70226768 | MsG0180003922.01.T01:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | - | Chr1:70227749-70227768 | MsG0180003922.01.T01:CDS | 30.0% |
| ! | TAACTAAAGGGTATAGATCT+TGG | - | Chr1:70225624-70225643 | MsG0180003922.01.T01:intron | 30.0% |
| ! | TTAGGACATTTTGCAAAGTT+GGG | - | Chr1:70227289-70227308 | MsG0180003922.01.T01:intron | 30.0% |
| ! | TTTTTATAAAAACGACCGGA+GGG | - | Chr1:70225985-70226004 | MsG0180003922.01.T01:intron | 30.0% |
| !! | CTTTAGTTCTTTACACTATG+TGG | - | Chr1:70226493-70226512 | MsG0180003922.01.T01:intron | 30.0% |
| !! | TATGGTGTTTCTTGTTTCTA+GGG | - | Chr1:70226196-70226215 | MsG0180003922.01.T01:intron | 30.0% |
| !! | TGGTTCCTAACAGTTTTATA+CGG | + | Chr1:70226091-70226110 | None:intergenic | 30.0% |
| !! | TTTTAGTGGATGAAAAGTGT+TGG | - | Chr1:70225366-70225385 | MsG0180003922.01.T01:intron | 30.0% |
| !!! | TTTTTTATAAAAACGACCGG+AGG | - | Chr1:70225984-70226003 | MsG0180003922.01.T01:intron | 30.0% |
| AACCTATGATGTATAGGTAC+GGG | + | Chr1:70227913-70227932 | None:intergenic | 35.0% | |
| AAGTGAACAAAAGGGTCAAT+GGG | + | Chr1:70227978-70227997 | None:intergenic | 35.0% | |
| AGATTTGACCAATGAGGTTA+TGG | - | Chr1:70226346-70226365 | MsG0180003922.01.T01:intron | 35.0% | |
| ATTGTACTAAATCGGGTATC+AGG | + | Chr1:70226928-70226947 | None:intergenic | 35.0% | |
| CAACCTATGATGTATAGGTA+CGG | + | Chr1:70227914-70227933 | None:intergenic | 35.0% | |
| CGAGAAAACAGAAAATGTGT+CGG | - | Chr1:70227443-70227462 | MsG0180003922.01.T01:intron | 35.0% | |
| CTGACCATATATAGAGGAAT+GGG | - | Chr1:70226369-70226388 | MsG0180003922.01.T01:intron | 35.0% | |
| GAATGTGAGTATTTAGCAAG+CGG | - | Chr1:70227229-70227248 | MsG0180003922.01.T01:intron | 35.0% | |
| GTCATCCGTATAAAACTGTT+AGG | - | Chr1:70226083-70226102 | MsG0180003922.01.T01:intron | 35.0% | |
| TACAATGTGTTGTCAAGTAG+TGG | - | Chr1:70226942-70226961 | MsG0180003922.01.T01:intron | 35.0% | |
| TATTTAGCAAGCGGTTATGT+TGG | - | Chr1:70227238-70227257 | MsG0180003922.01.T01:intron | 35.0% | |
| TCTTTCTGATTTCCTTGCAA+AGG | - | Chr1:70227149-70227168 | MsG0180003922.01.T01:intron | 35.0% | |
| TGTAGTAGATTTGACCAATG+AGG | - | Chr1:70226340-70226359 | MsG0180003922.01.T01:intron | 35.0% | |
| TGTTGTATTCCTGCATTTGT+TGG | - | Chr1:70227369-70227388 | MsG0180003922.01.T01:intron | 35.0% | |
| TTATGGCTGACCATATATAG+AGG | - | Chr1:70226363-70226382 | MsG0180003922.01.T01:intron | 35.0% | |
| TTTCCTTGCAAAGGTTAATG+TGG | - | Chr1:70227158-70227177 | MsG0180003922.01.T01:intron | 35.0% | |
| ! | GTTAGGACATTTTGCAAAGT+TGG | - | Chr1:70227288-70227307 | MsG0180003922.01.T01:intron | 35.0% |
| ! | TTCTTTGTTATAATGAGCCG+AGG | - | Chr1:70226052-70226071 | MsG0180003922.01.T01:intron | 35.0% |
| ! | TTTGGTTATTTCGTCGTAGT+TGG | - | Chr1:70227680-70227699 | MsG0180003922.01.T01:CDS | 35.0% |
| AAATCGGGTATCAGGAAAAG+CGG | + | Chr1:70226920-70226939 | None:intergenic | 40.0% | |
| ACCACCCATTCCTCTATATA+TGG | + | Chr1:70226376-70226395 | None:intergenic | 40.0% | |
| ACCATATATAGAGGAATGGG+TGG | - | Chr1:70226372-70226391 | MsG0180003922.01.T01:intron | 40.0% | |
| ACGGATGACAAATTAGTCCT+CGG | + | Chr1:70226072-70226091 | None:intergenic | 40.0% | |
| AGCTGAAACAGAGACAACAA+GGG | + | Chr1:70225460-70225479 | None:intergenic | 40.0% | |
| ATGATGTATAGGTACGGGTA+CGG | + | Chr1:70227908-70227927 | None:intergenic | 40.0% | |
| CAAGTGAACAAAAGGGTCAA+TGG | + | Chr1:70227979-70227998 | None:intergenic | 40.0% | |
| CATCCCACAAGTGAACAAAA+GGG | + | Chr1:70227986-70228005 | None:intergenic | 40.0% | |
| CTCCAAACATGGATAAGTAC+CGG | - | Chr1:70227586-70227605 | MsG0180003922.01.T01:intron | 40.0% | |
| GAACCACATTAACCTTTGCA+AGG | + | Chr1:70227164-70227183 | None:intergenic | 40.0% | |
| GATTACCAACCAACAAATGC+AGG | + | Chr1:70227381-70227400 | None:intergenic | 40.0% | |
| GCTGACCATATATAGAGGAA+TGG | - | Chr1:70226368-70226387 | MsG0180003922.01.T01:intron | 40.0% | |
| TACCCGTACCTATACATCAT+AGG | - | Chr1:70227908-70227927 | MsG0180003922.01.T01:five_prime_UTR | 40.0% | |
| TACCGGTACTTATCCATGTT+TGG | + | Chr1:70227591-70227610 | None:intergenic | 40.0% | |
| TCATCCCACAAGTGAACAAA+AGG | + | Chr1:70227987-70228006 | None:intergenic | 40.0% | |
| TCTGTTCGTGCTAGAAGTTT+CGG | - | Chr1:70227058-70227077 | MsG0180003922.01.T01:intron | 40.0% | |
| TGTTTGTATCCGTGCTTCAT+AGG | + | Chr1:70225698-70225717 | None:intergenic | 40.0% | |
| TTCGGTGAAAGCTGTGATAT+AGG | - | Chr1:70227076-70227095 | MsG0180003922.01.T01:intron | 40.0% | |
| ! | GTATTCCTGCATTTGTTGGT+TGG | - | Chr1:70227373-70227392 | MsG0180003922.01.T01:intron | 40.0% |
| ! | TGACCCTTTTGTTCACTTGT+GGG | - | Chr1:70227980-70227999 | MsG0180003922.01.T01:five_prime_UTR | 40.0% |
| ! | TTGACCCTTTTGTTCACTTG+TGG | - | Chr1:70227979-70227998 | MsG0180003922.01.T01:five_prime_UTR | 40.0% |
| !! | AAAGTGGGGGTGTATTTTAG+TGG | - | Chr1:70225352-70225371 | MsG0180003922.01.T01:intron | 40.0% |
| !! | AAATGTGTCGGCTATATGCA+AGG | - | Chr1:70227455-70227474 | MsG0180003922.01.T01:intron | 40.0% |
| !! | AAGCTTTTTCTGCTGATGTG+TGG | - | Chr1:70226692-70226711 | MsG0180003922.01.T01:intron | 40.0% |
| !! | AGTTGTTAGCTCTGAAGCAT+GGG | - | Chr1:70227561-70227580 | MsG0180003922.01.T01:intron | 40.0% |
| !! | TAGTTGTTAGCTCTGAAGCA+TGG | - | Chr1:70227560-70227579 | MsG0180003922.01.T01:intron | 40.0% |
| !! | TCTAGAGCAAAGACCCATTT+TGG | + | Chr1:70226171-70226190 | None:intergenic | 40.0% |
| AAACCGGCGTTGTCATATAC+AGG | - | Chr1:70226846-70226865 | MsG0180003922.01.T01:intron | 45.0% | |
| AAGCATGGGTACTCCAAACA+TGG | - | Chr1:70227575-70227594 | MsG0180003922.01.T01:intron | 45.0% | |
| ACTGGGACATGCTTAATTCG+AGG | - | Chr1:70225821-70225840 | MsG0180003922.01.T01:intron | 45.0% | |
| ATGGTCAGCCATAACCTCAT+TGG | + | Chr1:70226357-70226376 | None:intergenic | 45.0% | |
| CAGCTGAAACAGAGACAACA+AGG | + | Chr1:70225461-70225480 | None:intergenic | 45.0% | |
| GAGTGAAGACCTATGAAGCA+CGG | - | Chr1:70225686-70225705 | MsG0180003922.01.T01:intron | 45.0% | |
| GATGGTGCGACTGATAAAAG+AGG | - | Chr1:70225489-70225508 | MsG0180003922.01.T01:intron | 45.0% | |
| GCGCAGATTGCTACAAAACA+TGG | - | Chr1:70228118-70228137 | MsG0180003922.01.T01:five_prime_UTR | 45.0% | |
| GTGTGTTATGGCGTCTGAAA+CGG | - | Chr1:70225407-70225426 | MsG0180003922.01.T01:intron | 45.0% | |
| GTTGGTGCAGCAAAAACGTA+CGG | - | Chr1:70227698-70227717 | MsG0180003922.01.T01:CDS | 45.0% | |
| TAAGAGATTAGATGGGGTCG+CGG | - | Chr1:70226130-70226149 | MsG0180003922.01.T01:intron | 45.0% | |
| TCTAGCACGAACAGACCATA+TGG | + | Chr1:70227053-70227072 | None:intergenic | 45.0% | |
| TGAAGCACGGATACAAACAC+CGG | - | Chr1:70225699-70225718 | MsG0180003922.01.T01:intron | 45.0% | |
| TGATGTATAGGTACGGGTAC+GGG | + | Chr1:70227907-70227926 | None:intergenic | 45.0% | |
| ! | AAATGAAGGTACGGGTACGT+TGG | + | Chr1:70227861-70227880 | None:intergenic | 45.0% |
| ! | GGACTAGTAATAGTTCCCTC+CGG | + | Chr1:70226003-70226022 | None:intergenic | 45.0% |
| !! | ACATGGATAAGTACCGGTAC+CGG | - | Chr1:70227592-70227611 | MsG0180003922.01.T01:intron | 45.0% |
| !! | GTCAGTATCAGTGTCGTTTC+CGG | + | Chr1:70225721-70225740 | None:intergenic | 45.0% |
| !! | TACTCTGGGATTAGTGGATC+AGG | + | Chr1:70228152-70228171 | None:intergenic | 45.0% |
| AAGAGATTAGATGGGGTCGC+GGG | - | Chr1:70226131-70226150 | MsG0180003922.01.T01:intron | 50.0% | |
| ACCACGGTAAAGACCAGACT+GGG | + | Chr1:70225872-70225891 | None:intergenic | 50.0% | |
| CAGCCTGTATATGACAACGC+CGG | + | Chr1:70226852-70226871 | None:intergenic | 50.0% | |
| CATGACACGTGTTCGACACT+GGG | - | Chr1:70225804-70225823 | MsG0180003922.01.T01:intron | 50.0% | |
| GTTTCAGCTGCTGTAGCTGA+TGG | - | Chr1:70225471-70225490 | MsG0180003922.01.T01:intron | 50.0% | |
| TACCACGGTAAAGACCAGAC+TGG | + | Chr1:70225873-70225892 | None:intergenic | 50.0% | |
| TCATAGGTGAAGACCCAGTC+TGG | - | Chr1:70225856-70225875 | MsG0180003922.01.T01:intron | 50.0% | |
| TCATGACACGTGTTCGACAC+TGG | - | Chr1:70225803-70225822 | MsG0180003922.01.T01:intron | 50.0% | |
| ! | ACTTTTGCCCTACAACGCTG+CGG | + | Chr1:70225177-70225196 | None:intergenic | 50.0% |
| !! | CATGGATAAGTACCGGTACC+GGG | - | Chr1:70227593-70227612 | MsG0180003922.01.T01:intron | 50.0% |
| ACGAGTACCATACGCGTACC+CGG | + | Chr1:70227631-70227650 | None:intergenic | 55.0% | |
| TACCATACGCGTACCCGGTA+CGG | + | Chr1:70227626-70227645 | None:intergenic | 55.0% | |
| ! | ACCCAGTCTGGTCTTTACCG+TGG | - | Chr1:70225868-70225887 | MsG0180003922.01.T01:intron | 55.0% |
| !! | GAGGAGCGTCTGTGCTTCAT+AGG | - | Chr1:70225840-70225859 | MsG0180003922.01.T01:intron | 55.0% |
| ACCATACGCGTACCCGGTAC+GGG | + | Chr1:70227625-70227644 | None:intergenic | 60.0% | |
| GGGGTCGCGGGAATATTGTG+AGG | - | Chr1:70226143-70226162 | MsG0180003922.01.T01:intron | 60.0% | |
| ! | GTCTGAAACGGCGTCGTCTG+CGG | - | Chr1:70225419-70225438 | MsG0180003922.01.T01:intron | 60.0% |
| ACCCGTACCGGGTACGCGTA+TGG | - | Chr1:70227621-70227640 | MsG0180003922.01.T01:intron | 65.0% | |
| AGTGCGCACCGCAGCGTTGT+AGG | - | Chr1:70225166-70225185 | MsG0180003922.01.T01:intron | 65.0% | |
| GTGCGCACCGCAGCGTTGTA+GGG | - | Chr1:70225167-70225186 | MsG0180003922.01.T01:intron | 65.0% | |
| TACCGGGTACGCACCCGTAC+CGG | - | Chr1:70227609-70227628 | MsG0180003922.01.T01:intron | 65.0% | |
| TACGGGTGCGTACCCGGTAC+CGG | + | Chr1:70227608-70227627 | None:intergenic | 65.0% | |
| ACCCGGTACGGGTGCGTACC+CGG | + | Chr1:70227614-70227633 | None:intergenic | 70.0% | |
| ACCGGGTACGCACCCGTACC+GGG | - | Chr1:70227610-70227629 | MsG0180003922.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 70225071 | 70228172 | 70225071 | ID=MsG0180003922.01;Name=MsG0180003922.01 |
| Chr1 | mRNA | 70225071 | 70228172 | 70225071 | ID=MsG0180003922.01.T01;Parent=MsG0180003922.01;Name=MsG0180003922.01.T01;_AED=0.42;_eAED=0.45;_QI=343|0.5|0.66|1|1|1|3|0|95 |
| Chr1 | exon | 70225071 | 70225149 | 70225071 | ID=MsG0180003922.01.T01:exon:6112;Parent=MsG0180003922.01.T01 |
| Chr1 | exon | 70225765 | 70225817 | 70225765 | ID=MsG0180003922.01.T01:exon:6111;Parent=MsG0180003922.01.T01 |
| Chr1 | exon | 70227674 | 70228172 | 70227674 | ID=MsG0180003922.01.T01:exon:6110;Parent=MsG0180003922.01.T01 |
| Chr1 | five_prime_UTR | 70227830 | 70228172 | 70227830 | ID=MsG0180003922.01.T01:five_prime_utr;Parent=MsG0180003922.01.T01 |
| Chr1 | CDS | 70227674 | 70227829 | 70227674 | ID=MsG0180003922.01.T01:cds;Parent=MsG0180003922.01.T01 |
| Chr1 | CDS | 70225765 | 70225817 | 70225765 | ID=MsG0180003922.01.T01:cds;Parent=MsG0180003922.01.T01 |
| Chr1 | CDS | 70225071 | 70225149 | 70225071 | ID=MsG0180003922.01.T01:cds;Parent=MsG0180003922.01.T01 |
| Gene Sequence |
| Protein sequence |
