Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972670 | XP_024641758.1 | 66.879 | 157 | 4 | 1 | 1 | 109 | 1 | 157 | 1.55e-61 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972670 | A0A0B2Q507 | 65.217 | 92 | 30 | 1 | 16 | 107 | 64 | 153 | 4.92e-32 | 119 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0972670 | 0.806731 | 7.134487e-50 | -8.615850e-47 |
| Msa0001780 | Msa0972670 | 0.800697 | 1.276270e-48 | -8.615850e-47 |
| Msa0012060 | Msa0972670 | 0.802125 | 6.507932e-49 | -8.615850e-47 |
| Msa0017510 | Msa0972670 | 0.853524 | 2.257095e-61 | -8.615850e-47 |
| Msa0024550 | Msa0972670 | 0.814716 | 1.336859e-51 | -8.615850e-47 |
| Msa0028640 | Msa0972670 | 0.816669 | 4.909336e-52 | -8.615850e-47 |
| Msa0031340 | Msa0972670 | 0.804789 | 1.824891e-49 | -8.615850e-47 |
| Msa0034270 | Msa0972670 | 0.826026 | 3.400038e-54 | -8.615850e-47 |
| Msa0036830 | Msa0972670 | 0.801132 | 1.040284e-48 | -8.615850e-47 |
| Msa0040450 | Msa0972670 | 0.821493 | 3.920275e-53 | -8.615850e-47 |
| Msa0045790 | Msa0972670 | 0.800997 | 1.108118e-48 | -8.615850e-47 |
| Msa0046100 | Msa0972670 | 0.814649 | 1.383622e-51 | -8.615850e-47 |
| Msa0046160 | Msa0972670 | 0.801543 | 8.567320e-49 | -8.615850e-47 |
| Msa0068680 | Msa0972670 | 0.824463 | 7.962709e-54 | -8.615850e-47 |
| Msa0074240 | Msa0972670 | 0.818926 | 1.518853e-52 | -8.615850e-47 |
| Msa0076250 | Msa0972670 | 0.802128 | 6.498096e-49 | -8.615850e-47 |
| Msa0080090 | Msa0972670 | 0.803464 | 3.442383e-49 | -8.615850e-47 |
| Msa0081480 | Msa0972670 | 0.805938 | 1.048241e-49 | -8.615850e-47 |
| Msa0089630 | Msa0972670 | 0.838670 | 2.504964e-57 | -8.615850e-47 |
| Msa0094850 | Msa0972670 | 0.801028 | 1.092498e-48 | -8.615850e-47 |
| Msa0110970 | Msa0972670 | 0.830038 | 3.677668e-55 | -8.615850e-47 |
| Msa0114060 | Msa0972670 | 0.824940 | 6.147012e-54 | -8.615850e-47 |
| Msa0120400 | Msa0972670 | 0.822334 | 2.503628e-53 | -8.615850e-47 |
| Msa0625720 | Msa0972670 | 0.809425 | 1.904226e-50 | -8.615850e-47 |
| Msa0626510 | Msa0972670 | 0.814764 | 1.305062e-51 | -8.615850e-47 |
| Msa0627450 | Msa0972670 | 0.817553 | 3.107000e-52 | -8.615850e-47 |
| Msa0641360 | Msa0972670 | 0.824795 | 6.651586e-54 | -8.615850e-47 |
| Msa0657970 | Msa0972670 | 0.823075 | 1.683276e-53 | -8.615850e-47 |
| Msa0663390 | Msa0972670 | 0.808442 | 3.090878e-50 | -8.615850e-47 |
| Msa0664910 | Msa0972670 | 0.803757 | 2.993673e-49 | -8.615850e-47 |
| Msa0667050 | Msa0972670 | 0.823341 | 1.459566e-53 | -8.615850e-47 |
| Msa0669320 | Msa0972670 | 0.810744 | 9.897996e-51 | -8.615850e-47 |
| Msa0672690 | Msa0972670 | 0.809973 | 1.451911e-50 | -8.615850e-47 |
| Msa0677410 | Msa0972670 | 0.807009 | 6.232385e-50 | -8.615850e-47 |
| Msa0683510 | Msa0972670 | 0.810059 | 1.391381e-50 | -8.615850e-47 |
| Msa0688480 | Msa0972670 | 0.804637 | 1.963136e-49 | -8.615850e-47 |
| Msa0693010 | Msa0972670 | -0.808000 | 3.840279e-50 | -8.615850e-47 |
| Msa0696450 | Msa0972670 | 0.810568 | 1.080690e-50 | -8.615850e-47 |
| Msa0697160 | Msa0972670 | 0.803212 | 3.882085e-49 | -8.615850e-47 |
| Msa0712270 | Msa0972670 | 0.821777 | 3.370749e-53 | -8.615850e-47 |
| Msa0733390 | Msa0972670 | 0.815788 | 7.725650e-52 | -8.615850e-47 |
| Msa0739730 | Msa0972670 | 0.800247 | 1.576305e-48 | -8.615850e-47 |
| Msa0760130 | Msa0972670 | 0.803817 | 2.908299e-49 | -8.615850e-47 |
| Msa0767300 | Msa0972670 | 0.812673 | 3.766742e-51 | -8.615850e-47 |
| Msa0801760 | Msa0972670 | 0.807964 | 3.907917e-50 | -8.615850e-47 |
| Msa0822870 | Msa0972670 | 0.825999 | 3.450548e-54 | -8.615850e-47 |
| Msa0824660 | Msa0972670 | 0.805349 | 1.393331e-49 | -8.615850e-47 |
| Msa0828560 | Msa0972670 | 0.826679 | 2.376271e-54 | -8.615850e-47 |
| Msa0124060 | Msa0972670 | 0.802190 | 6.311015e-49 | -8.615850e-47 |
| Msa0136070 | Msa0972670 | 0.807822 | 4.188496e-50 | -8.615850e-47 |
| Msa0140780 | Msa0972670 | 0.814584 | 1.430385e-51 | -8.615850e-47 |
| Msa0142200 | Msa0972670 | 0.803546 | 3.311327e-49 | -8.615850e-47 |
| Msa0157290 | Msa0972670 | 0.853704 | 2.004037e-61 | -8.615850e-47 |
| Msa0159930 | Msa0972670 | 0.823438 | 1.384758e-53 | -8.615850e-47 |
| Msa0166560 | Msa0972670 | 0.820817 | 5.614625e-53 | -8.615850e-47 |
| Msa0168500 | Msa0972670 | 0.810697 | 1.013287e-50 | -8.615850e-47 |
| Msa0169860 | Msa0972670 | 0.816404 | 5.628422e-52 | -8.615850e-47 |
| Msa0173660 | Msa0972670 | 0.804939 | 1.697815e-49 | -8.615850e-47 |
| Msa0197660 | Msa0972670 | 0.830834 | 2.349478e-55 | -8.615850e-47 |
| Msa0200260 | Msa0972670 | 0.815521 | 8.858163e-52 | -8.615850e-47 |
| Msa0202950 | Msa0972670 | 0.811725 | 6.063536e-51 | -8.615850e-47 |
| Msa0211150 | Msa0972670 | 0.816259 | 6.063006e-52 | -8.615850e-47 |
| Msa0212990 | Msa0972670 | 0.809514 | 1.822374e-50 | -8.615850e-47 |
| Msa0213520 | Msa0972670 | 0.805621 | 1.221747e-49 | -8.615850e-47 |
| Msa0218780 | Msa0972670 | 0.801871 | 7.338468e-49 | -8.615850e-47 |
| Msa0220580 | Msa0972670 | 0.823820 | 1.127202e-53 | -8.615850e-47 |
| Msa0221290 | Msa0972670 | 0.826942 | 2.055917e-54 | -8.615850e-47 |
| Msa0222620 | Msa0972670 | 0.801165 | 1.024255e-48 | -8.615850e-47 |
| Msa0223080 | Msa0972670 | 0.800537 | 1.375759e-48 | -8.615850e-47 |
| Msa0225320 | Msa0972670 | 0.801609 | 8.305772e-49 | -8.615850e-47 |
| Msa0227470 | Msa0972670 | 0.806271 | 8.919685e-50 | -8.615850e-47 |
| Msa0230740 | Msa0972670 | 0.803922 | 2.766535e-49 | -8.615850e-47 |
| Msa0367870 | Msa0972670 | 0.801162 | 1.025578e-48 | -8.615850e-47 |
| Msa0376350 | Msa0972670 | 0.827223 | 1.761952e-54 | -8.615850e-47 |
| Msa0388960 | Msa0972670 | 0.806339 | 8.629587e-50 | -8.615850e-47 |
| Msa0392420 | Msa0972670 | 0.800785 | 1.224668e-48 | -8.615850e-47 |
| Msa0395790 | Msa0972670 | 0.818216 | 2.201026e-52 | -8.615850e-47 |
| Msa0403970 | Msa0972670 | 0.810511 | 1.111485e-50 | -8.615850e-47 |
| Msa0410650 | Msa0972670 | 0.814370 | 1.595147e-51 | -8.615850e-47 |
| Msa0417270 | Msa0972670 | 0.801267 | 9.758204e-49 | -8.615850e-47 |
| Msa0417880 | Msa0972670 | 0.811738 | 6.026133e-51 | -8.615850e-47 |
| Msa0419820 | Msa0972670 | 0.800700 | 1.274360e-48 | -8.615850e-47 |
| Msa0424790 | Msa0972670 | 0.826708 | 2.339205e-54 | -8.615850e-47 |
| Msa0428080 | Msa0972670 | 0.803434 | 3.492877e-49 | -8.615850e-47 |
| Msa0440750 | Msa0972670 | 0.821892 | 3.171009e-53 | -8.615850e-47 |
| Msa0452920 | Msa0972670 | 0.814882 | 1.228780e-51 | -8.615850e-47 |
| Msa0467490 | Msa0972670 | 0.802410 | 5.684245e-49 | -8.615850e-47 |
| Msa0479170 | Msa0972670 | 0.824526 | 7.695371e-54 | -8.615850e-47 |
| Msa0479660 | Msa0972670 | 0.818377 | 2.023866e-52 | -8.615850e-47 |
| Msa0481530 | Msa0972670 | 0.805898 | 1.068658e-49 | -8.615850e-47 |
| Msa0239800 | Msa0972670 | 0.831194 | 1.916289e-55 | -8.615850e-47 |
| Msa0243100 | Msa0972670 | 0.847516 | 1.100566e-59 | -8.615850e-47 |
| Msa0244860 | Msa0972670 | 0.802852 | 4.608526e-49 | -8.615850e-47 |
| Msa0261340 | Msa0972670 | 0.825082 | 5.691328e-54 | -8.615850e-47 |
| Msa0277820 | Msa0972670 | 0.811684 | 6.188741e-51 | -8.615850e-47 |
| Msa0283450 | Msa0972670 | 0.805185 | 1.508074e-49 | -8.615850e-47 |
| Msa0283520 | Msa0972670 | 0.806671 | 7.343893e-50 | -8.615850e-47 |
| Msa0284420 | Msa0972670 | 0.816125 | 6.496147e-52 | -8.615850e-47 |
| Msa0287650 | Msa0972670 | 0.836000 | 1.208785e-56 | -8.615850e-47 |
| Msa0292400 | Msa0972670 | 0.803568 | 3.276095e-49 | -8.615850e-47 |
| Msa0297740 | Msa0972670 | 0.810054 | 1.394799e-50 | -8.615850e-47 |
| Msa0300270 | Msa0972670 | 0.806770 | 6.999808e-50 | -8.615850e-47 |
| Msa0317510 | Msa0972670 | 0.824249 | 8.943183e-54 | -8.615850e-47 |
| Msa0332000 | Msa0972670 | 0.810752 | 9.861493e-51 | -8.615850e-47 |
| Msa0339250 | Msa0972670 | 0.802376 | 5.776183e-49 | -8.615850e-47 |
| Msa0339490 | Msa0972670 | 0.800875 | 1.173601e-48 | -8.615850e-47 |
| Msa0341050 | Msa0972670 | 0.816244 | 6.112527e-52 | -8.615850e-47 |
| Msa0345330 | Msa0972670 | 0.802056 | 6.724933e-49 | -8.615850e-47 |
| Msa0345970 | Msa0972670 | 0.828054 | 1.112768e-54 | -8.615850e-47 |
| Msa0363070 | Msa0972670 | 0.811730 | 6.049023e-51 | -8.615850e-47 |
| Msa0487630 | Msa0972670 | 0.808694 | 2.730288e-50 | -8.615850e-47 |
| Msa0488560 | Msa0972670 | 0.806819 | 6.835901e-50 | -8.615850e-47 |
| Msa0498060 | Msa0972670 | 0.803176 | 3.948968e-49 | -8.615850e-47 |
| Msa0503580 | Msa0972670 | 0.804879 | 1.747639e-49 | -8.615850e-47 |
| Msa0507680 | Msa0972670 | 0.827604 | 1.427366e-54 | -8.615850e-47 |
| Msa0509610 | Msa0972670 | 0.807815 | 4.203257e-50 | -8.615850e-47 |
| Msa0516170 | Msa0972670 | 0.815093 | 1.103124e-51 | -8.615850e-47 |
| Msa0523460 | Msa0972670 | 0.814510 | 1.485319e-51 | -8.615850e-47 |
| Msa0529890 | Msa0972670 | 0.811371 | 7.238035e-51 | -8.615850e-47 |
| Msa0531180 | Msa0972670 | 0.800952 | 1.131886e-48 | -8.615850e-47 |
| Msa0535040 | Msa0972670 | 0.809142 | 2.189703e-50 | -8.615850e-47 |
| Msa0567780 | Msa0972670 | 0.804154 | 2.475766e-49 | -8.615850e-47 |
| Msa0571140 | Msa0972670 | 0.814656 | 1.378619e-51 | -8.615850e-47 |
| Msa0585560 | Msa0972670 | 0.800678 | 1.287855e-48 | -8.615850e-47 |
| Msa0601750 | Msa0972670 | 0.802478 | 5.505524e-49 | -8.615850e-47 |
| Msa0602250 | Msa0972670 | 0.805123 | 1.553600e-49 | -8.615850e-47 |
| Msa0844560 | Msa0972670 | 0.805117 | 1.558651e-49 | -8.615850e-47 |
| Msa0861870 | Msa0972670 | 0.806478 | 8.068351e-50 | -8.615850e-47 |
| Msa0869980 | Msa0972670 | 0.901588 | 2.301915e-78 | -8.615850e-47 |
| Msa0871270 | Msa0972670 | 0.815373 | 9.556142e-52 | -8.615850e-47 |
| Msa0876200 | Msa0972670 | 0.807580 | 4.716061e-50 | -8.615850e-47 |
| Msa0880140 | Msa0972670 | 0.851559 | 8.201599e-61 | -8.615850e-47 |
| Msa0880650 | Msa0972670 | 0.802139 | 6.463046e-49 | -8.615850e-47 |
| Msa0880950 | Msa0972670 | 0.802898 | 4.509055e-49 | -8.615850e-47 |
| Msa0893950 | Msa0972670 | 0.806705 | 7.224862e-50 | -8.615850e-47 |
| Msa0899980 | Msa0972670 | 0.802278 | 6.053734e-49 | -8.615850e-47 |
| Msa0903300 | Msa0972670 | 0.879791 | 9.334832e-70 | -8.615850e-47 |
| Msa0903690 | Msa0972670 | 0.811218 | 7.812820e-51 | -8.615850e-47 |
| Msa0909140 | Msa0972670 | 0.810496 | 1.119930e-50 | -8.615850e-47 |
| Msa0911540 | Msa0972670 | 0.806570 | 7.714634e-50 | -8.615850e-47 |
| Msa0931520 | Msa0972670 | 0.802895 | 4.514750e-49 | -8.615850e-47 |
| Msa0935670 | Msa0972670 | 0.815792 | 7.709222e-52 | -8.615850e-47 |
| Msa0935710 | Msa0972670 | 0.941153 | 6.822242e-101 | -8.615850e-47 |
| Msa0938220 | Msa0972670 | 0.819879 | 9.212114e-53 | -8.615850e-47 |
| Msa0941820 | Msa0972670 | 0.801569 | 8.462971e-49 | -8.615850e-47 |
| Msa0963270 | Msa0972670 | 0.812131 | 4.945940e-51 | -8.615850e-47 |
| Msa0964840 | Msa0972670 | 0.809211 | 2.116654e-50 | -8.615850e-47 |
| Msa0967380 | Msa0972670 | 0.832591 | 8.660644e-56 | -8.615850e-47 |
| Msa0969520 | Msa0972670 | 0.804221 | 2.397061e-49 | -8.615850e-47 |
| Msa0972100 | Msa0972670 | 0.809999 | 1.433044e-50 | -8.615850e-47 |
| Msa0972670 | Msa0975340 | 0.803981 | 2.689553e-49 | -8.615850e-47 |
| Msa0972670 | Msa1003030 | 0.806164 | 9.395452e-50 | -8.615850e-47 |
| Msa0972670 | Msa1003750 | 0.822386 | 2.435232e-53 | -8.615850e-47 |
| Msa0972670 | Msa1019430 | 0.808551 | 2.929487e-50 | -8.615850e-47 |
| Msa0972670 | Msa1019470 | 0.817438 | 3.297750e-52 | -8.615850e-47 |
| Msa0972670 | Msa1031930 | 0.801083 | 1.064150e-48 | -8.615850e-47 |
| Msa0972670 | Msa1075540 | 0.806653 | 7.409246e-50 | -8.615850e-47 |
| Msa0972670 | Msa1078170 | 0.810845 | 9.414761e-51 | -8.615850e-47 |
| Msa0972670 | Msa1079590 | 0.841087 | 5.876592e-58 | -8.615850e-47 |
| Msa0972670 | Msa1079740 | 0.800643 | 1.308892e-48 | -8.615850e-47 |
| Msa0972670 | Msa1082500 | 0.817173 | 3.782132e-52 | -8.615850e-47 |
| Msa0972670 | Msa1085200 | 0.814481 | 1.507158e-51 | -8.615850e-47 |
| Msa0972670 | Msa1103500 | 0.814636 | 1.392986e-51 | -8.615850e-47 |
| Msa0972670 | Msa1123380 | 0.813462 | 2.528163e-51 | -8.615850e-47 |
| Msa0972670 | Msa1131220 | 0.809701 | 1.661612e-50 | -8.615850e-47 |
| Msa0972670 | Msa1140210 | 0.816096 | 6.594401e-52 | -8.615850e-47 |
| Msa0972670 | Msa1142020 | 0.824303 | 8.683674e-54 | -8.615850e-47 |
| Msa0972670 | Msa1151910 | 0.821821 | 3.293034e-53 | -8.615850e-47 |
| Msa0972670 | Msa1154280 | 0.806652 | 7.412219e-50 | -8.615850e-47 |
| Msa0972670 | Msa1167340 | 0.808072 | 3.706571e-50 | -8.615850e-47 |
| Msa0972670 | Msa1168160 | 0.817217 | 3.698600e-52 | -8.615850e-47 |
| Msa0972670 | Msa1179280 | 0.807810 | 4.213189e-50 | -8.615850e-47 |
| Msa0972670 | Msa1209460 | 0.816815 | 4.551295e-52 | -8.615850e-47 |
| Msa0972670 | Msa1222970 | 0.808797 | 2.596318e-50 | -8.615850e-47 |
| Msa0972670 | Msa1228190 | 0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa0972670 | Msa1236410 | 0.805085 | 1.582837e-49 | -8.615850e-47 |
| Msa0972670 | Msa1238930 | 0.850985 | 1.191133e-60 | -8.615850e-47 |
| Msa0972670 | Msa1242220 | 0.821864 | 3.217555e-53 | -8.615850e-47 |
| Msa0972670 | Msa1283860 | 0.817501 | 3.191841e-52 | -8.615850e-47 |
| Msa0972670 | Msa1284260 | 0.805500 | 1.295258e-49 | -8.615850e-47 |
| Msa0972670 | Msa1284680 | 0.810467 | 1.136077e-50 | -8.615850e-47 |
| Msa0972670 | Msa1303250 | 0.801314 | 9.547155e-49 | -8.615850e-47 |
| Msa0972670 | Msa1305340 | 0.809898 | 1.506583e-50 | -8.615850e-47 |
| Msa0972670 | Msa1313150 | 0.804869 | 1.756121e-49 | -8.615850e-47 |
| Msa0972670 | Msa1320410 | 0.817713 | 2.858394e-52 | -8.615850e-47 |
| Msa0972670 | Msa1322860 | 0.800346 | 1.504978e-48 | -8.615850e-47 |
| Msa0972670 | Msa1322890 | 0.825613 | 4.259767e-54 | -8.615850e-47 |
| Msa0972670 | Msa1324500 | 0.819244 | 1.285987e-52 | -8.615850e-47 |
| Msa0972670 | Msa1327050 | 0.813718 | 2.221242e-51 | -8.615850e-47 |
| Msa0972670 | Msa1327680 | 0.803666 | 3.125829e-49 | -8.615850e-47 |
| Msa0972670 | Msa1346370 | 0.802002 | 6.899156e-49 | -8.615850e-47 |
| Msa0972670 | Msa1353980 | 0.822693 | 2.066965e-53 | -8.615850e-47 |
| Msa0972670 | Msa1372760 | 0.810556 | 1.086884e-50 | -8.615850e-47 |
| Msa0972670 | Msa1374550 | 0.824716 | 6.941385e-54 | -8.615850e-47 |
| Msa0972670 | Msa1400870 | -0.813651 | 2.298276e-51 | -8.615850e-47 |
| Msa0972670 | Msa1409700 | 0.806994 | 6.276852e-50 | -8.615850e-47 |
| Msa0972670 | Msa1409870 | 0.806239 | 9.057957e-50 | -8.615850e-47 |
| Msa0972670 | Msa1411020 | 0.808627 | 2.822099e-50 | -8.615850e-47 |
| Msa0972670 | Msa1423880 | 0.805466 | 1.317167e-49 | -8.615850e-47 |
| Msa0972670 | Msa1424290 | 0.805876 | 1.080040e-49 | -8.615850e-47 |
| Msa0972670 | Msa1424750 | 0.803891 | 2.807818e-49 | -8.615850e-47 |
| Msa0972670 | Msa1434350 | 0.806177 | 9.334381e-50 | -8.615850e-47 |
| Msa0972670 | Msa1436480 | 0.802931 | 4.438464e-49 | -8.615850e-47 |
| Msa0972670 | Msa1438250 | 0.808628 | 2.820437e-50 | -8.615850e-47 |
| Msa0972670 | Msa1439320 | 0.805427 | 1.342290e-49 | -8.615850e-47 |
| Msa0972670 | Msa1451160 | 0.804529 | 2.068209e-49 | -8.615850e-47 |
| Msa0972670 | Msa1460020 | 0.800561 | 1.360425e-48 | -8.615850e-47 |
| Msa0972670 | Msa1460240 | 0.818135 | 2.295214e-52 | -8.615850e-47 |
| Msa0972670 | Msa1461300 | 0.805079 | 1.587252e-49 | -8.615850e-47 |
| Msa0972670 | Msa1464810 | 0.814997 | 1.158705e-51 | -8.615850e-47 |
| Msa0972670 | Msa1466540 | 0.815785 | 7.739465e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972670 | MtrunA17_Chr6g0451421 | 46.099 | 141 | 28 | 1 | 14 | 106 | 5 | 145 | 9.49e-31 | 106 |
| Msa0972670 | MtrunA17_Chr6g0451411 | 42.143 | 140 | 33 | 1 | 16 | 107 | 175 | 314 | 2.54e-28 | 104 |
| Msa0972670 | MtrunA17_Chr2g0325301 | 39.706 | 136 | 34 | 1 | 17 | 104 | 10 | 145 | 3.33e-26 | 95.1 |
| Msa0972670 | MtrunA17_Chr2g0329701 | 38.406 | 138 | 37 | 1 | 17 | 106 | 234 | 371 | 1.57e-23 | 92.8 |
| Msa0972670 | MtrunA17_Chr6g0451451 | 66.667 | 63 | 21 | 0 | 47 | 109 | 25 | 87 | 4.34e-23 | 85.1 |
| Msa0972670 | MtrunA17_Chr7g0264421 | 37.681 | 138 | 38 | 1 | 17 | 106 | 204 | 341 | 1.18e-22 | 89.7 |
| Msa0972670 | MtrunA17_Chr6g0451441 | 38.667 | 150 | 36 | 2 | 16 | 109 | 319 | 468 | 6.31e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0972670 | AT3G01410.2 | 36.029 | 136 | 39 | 1 | 17 | 104 | 154 | 289 | 2.30e-21 | 86.3 |
| Msa0972670 | AT3G01410.1 | 36.029 | 136 | 39 | 1 | 17 | 104 | 154 | 289 | 2.30e-21 | 86.3 |
Find 42 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAACAGTTGAAAGGTTTA+TGG | 0.191806 | 6_4:+4968116 | Msa0972670:intron |
| GCTATACTGCGTACTGAAAA+TGG | 0.195325 | 6_4:+4967577 | Msa0972670:CDS |
| ACATCAACAATGCTTATTTA+AGG | 0.208439 | 6_4:+4968140 | Msa0972670:CDS |
| TCTTGTATCCTTGAGTTTGA+TGG | 0.246738 | 6_4:+4967517 | Msa0972670:CDS |
| ATGCCCACTATTAGCAGTTT+AGG | 0.253049 | 6_4:+4969067 | Msa0972670:three_prime_UTR |
| AGTACTTCAGTTTAGCAAAT+TGG | 0.284439 | 6_4:+4968965 | Msa0972670:three_prime_UTR |
| GCAAATCGGGCCATCTTTCT+TGG | 0.285264 | 6_4:+4968502 | Msa0972670:CDS |
| TGCCCACTATTAGCAGTTTA+GGG | 0.295761 | 6_4:+4969068 | Msa0972670:three_prime_UTR |
| AGCTCCGGCACCAGCTGGTC+CGG | 0.304765 | 6_4:-4967557 | None:intergenic |
| GAACTTATGCAATGAGGCTT+TGG | 0.369368 | 6_4:+4968162 | Msa0972670:CDS |
| CACCTCTCTCGCGTTTCCAC+TGG | 0.407321 | 6_4:-4965070 | None:intergenic |
| AAACACATTAGAGCTGGAAT+TGG | 0.422193 | 6_4:+4965016 | Msa0972670:five_prime_UTR |
| AGTCCCTAAACTGCTAATAG+TGG | 0.428944 | 6_4:-4969071 | None:intergenic |
| AGCTGATGCTCAAGCAAATC+GGG | 0.429319 | 6_4:+4968489 | Msa0972670:CDS |
| AAGCTGATGCTCAAGCAAAT+CGG | 0.432683 | 6_4:+4968488 | Msa0972670:CDS |
| AGCTGGTCCGGGATTCCCGC+TGG | 0.458523 | 6_4:-4967545 | None:intergenic |
| ATAGTGGGCATCTACACATT+AGG | 0.460561 | 6_4:-4969055 | None:intergenic |
| GCAATGAGGCTTTGGAGCTA+AGG | 0.469965 | 6_4:+4968170 | Msa0972670:CDS |
| CTATACTGCGTACTGAAAAT+GGG | 0.472624 | 6_4:+4967578 | Msa0972670:CDS |
| GGTGCAGCCAGCGGGAATCC+CGG | 0.474643 | 6_4:+4967538 | Msa0972670:CDS |
| GCGTACTGAAAATGGGAGTC+TGG | 0.474898 | 6_4:+4967585 | Msa0972670:CDS |
| TTCAGTACGCAGTATAGCTC+CGG | 0.494280 | 6_4:-4967572 | None:intergenic |
| TGGTGGTTTCACATGTGAAC+TGG | 0.504020 | 6_4:+4968985 | Msa0972670:three_prime_UTR |
| GCTCCGGCACCAGCTGGTCC+GGG | 0.509262 | 6_4:-4967556 | None:intergenic |
| CAATGAGGCTTTGGAGCTAA+GGG | 0.513996 | 6_4:+4968171 | Msa0972670:CDS |
| AGTATAGCTCCGGCACCAGC+TGG | 0.523879 | 6_4:-4967562 | None:intergenic |
| AATCGGGCCATCTTTCTTGG+AGG | 0.525253 | 6_4:+4968505 | Msa0972670:CDS |
| ACTTCAGTTTAGCAAATTGG+TGG | 0.529105 | 6_4:+4968968 | Msa0972670:three_prime_UTR |
| AATCCCGGACCAGCTGGTGC+CGG | 0.539704 | 6_4:+4967553 | Msa0972670:CDS |
| AGTTTGATGGTGCAGCCAGC+GGG | 0.541634 | 6_4:+4967530 | Msa0972670:CDS |
| TCTAACAAACACATTAGAGC+TGG | 0.541796 | 6_4:+4965010 | Msa0972670:five_prime_UTR |
| GGTCTAACCTCCAAGAAAGA+TGG | 0.555833 | 6_4:-4968512 | None:intergenic |
| TTTAAGGAACTTATGCAATG+AGG | 0.557886 | 6_4:+4968156 | Msa0972670:CDS |
| GTCCCTAAACTGCTAATAGT+GGG | 0.566813 | 6_4:-4969070 | None:intergenic |
| CATGTGAACTGGCATGTCAA+AGG | 0.585422 | 6_4:+4968996 | Msa0972670:three_prime_UTR |
| GAGAGAGAAATCACGACCAG+TGG | 0.597778 | 6_4:+4965054 | Msa0972670:five_prime_UTR |
| GAGTTTGATGGTGCAGCCAG+CGG | 0.600495 | 6_4:+4967529 | Msa0972670:CDS |
| TGGCTGCACCATCAAACTCA+AGG | 0.610487 | 6_4:-4967525 | None:intergenic |
| GACCAGTGGAAACGCGAGAG+AGG | 0.612317 | 6_4:+4965068 | Msa0972670:five_prime_UTR |
| GTGGTATTGCAATCGTAGAG+AGG | 0.645749 | 6_4:+4966143 | Msa0972670:CDS |
| CTTGTCCAGATGCATCGTTG+TGG | 0.664152 | 6_4:+4966124 | Msa0972670:intron |
| ATGAATTAACGATCATCCGA+CGG | 0.680586 | 6_4:+4968892 | Msa0972670:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAATTATTCAATG+CGG | + | chr6_4:4965519-4965538 | Msa0972670:intron | 10.0% |
| !!! | CATAATTTAATTTATCTATA+AGG | + | chr6_4:4967145-4967164 | Msa0972670:intron | 10.0% |
| !!! | ATAATATAATTTTCTGCATT+CGG | - | chr6_4:4965311-4965330 | None:intergenic | 15.0% |
| !!! | AATAAAAAACAGAAGTTTTT+TGG | - | chr6_4:4965502-4965521 | None:intergenic | 15.0% |
| !! | TTAAAAAAATTATTCAATGC+GGG | + | chr6_4:4965520-4965539 | Msa0972670:intron | 15.0% |
| !!! | TTAATTTATTGCATTTTAGT+TGG | + | chr6_4:4966034-4966053 | Msa0972670:intron | 15.0% |
| !!! | TAATTTATTGCATTTTAGTT+GGG | + | chr6_4:4966035-4966054 | Msa0972670:intron | 15.0% |
| !! | TATAAATTGTTGAAAAATCT+TGG | + | chr6_4:4966211-4966230 | Msa0972670:intron | 15.0% |
| !!! | GTTGTGATAAAAATTAATTT+TGG | + | chr6_4:4966299-4966318 | Msa0972670:intron | 15.0% |
| !!! | TAATATAATTTTCTGCATTC+GGG | - | chr6_4:4965310-4965329 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGAAGCTAAA+AGG | + | chr6_4:4965403-4965422 | Msa0972670:intron | 20.0% |
| !! | TAAAAAAATTATTCAATGCG+GGG | + | chr6_4:4965521-4965540 | Msa0972670:intron | 20.0% |
| !!! | GACCTTATTAGAATAATTTT+TGG | + | chr6_4:4966462-4966481 | Msa0972670:intron | 20.0% |
| !! | CTCCAAAAATTATTCTAATA+AGG | - | chr6_4:4966467-4966486 | None:intergenic | 20.0% |
| !!! | CTTATTAGAATAATTTTTGG+AGG | + | chr6_4:4966465-4966484 | Msa0972670:intron | 20.0% |
| !! | TTATTAGTGCAATATATAGT+TGG | + | chr6_4:4966982-4967001 | Msa0972670:intron | 20.0% |
| !! | AGAAAACTTATGTATAGTTT+AGG | + | chr6_4:4967050-4967069 | Msa0972670:intron | 20.0% |
| !! | TTGTTCATAAAAAAGATACA+TGG | + | chr6_4:4967881-4967900 | Msa0972670:intron | 20.0% |
| !! | TTCTTTGTTAAAAACAACTA+TGG | + | chr6_4:4967934-4967953 | Msa0972670:intron | 20.0% |
| !! | ATGAAACTAAATGAATTCAA+AGG | - | chr6_4:4967991-4968010 | None:intergenic | 20.0% |
| !! | TTAACAATATCTAACCAATT+AGG | - | chr6_4:4968021-4968040 | None:intergenic | 20.0% |
| !!! | TTTTACTGTCAAAATACAAA+TGG | + | chr6_4:4968350-4968369 | Msa0972670:intron | 20.0% |
| !!! | TGTTCTTTTGAAAATGTTTA+AGG | + | chr6_4:4968453-4968472 | Msa0972670:intron | 20.0% |
| !!! | CAAACTAAAAGATTCATTTT+TGG | - | chr6_4:4968658-4968677 | None:intergenic | 20.0% |
| !! | GTTCAAAAGAATTATCTAAA+TGG | - | chr6_4:4968795-4968814 | None:intergenic | 20.0% |
| !!! | ATCTTAAACTTTTTTGTAGA+CGG | + | chr6_4:4968850-4968869 | Msa0972670:intron | 20.0% |
| !!! | TTTTCTGTTTTGATTGAGTT+TGG | + | chr6_4:4965191-4965210 | Msa0972670:intron | 25.0% |
| !!! | TTTCTGTTTTGATTGAGTTT+GGG | + | chr6_4:4965192-4965211 | Msa0972670:intron | 25.0% |
| !!! | TATTTTGTTTGATACATGTC+TGG | + | chr6_4:4965370-4965389 | Msa0972670:intron | 25.0% |
| ! | ATGTAAAAAATAGCAGAAGT+AGG | - | chr6_4:4965704-4965723 | None:intergenic | 25.0% |
| ! | TTTATCTTGCTAAGTAGAAT+CGG | - | chr6_4:4965755-4965774 | None:intergenic | 25.0% |
| ! | AATGCAATGCTATTAACATA+TGG | + | chr6_4:4965807-4965826 | Msa0972670:intron | 25.0% |
| !! | TAATTTTTCCTCTTTCAACT+AGG | - | chr6_4:4965916-4965935 | None:intergenic | 25.0% |
| ! | ATAGGTTGTTACATTCTTTA+CGG | + | chr6_4:4966073-4966092 | Msa0972670:intron | 25.0% |
| !! | TATAAAATAAACCGACTTAC+TGG | - | chr6_4:4966178-4966197 | None:intergenic | 25.0% |
| ! | AATTGATAGAATAGAGTTGA+AGG | + | chr6_4:4966341-4966360 | Msa0972670:intron | 25.0% |
| ! | TACGATTTAGAAAATCACAA+TGG | + | chr6_4:4966652-4966671 | Msa0972670:intron | 25.0% |
| ! | AAATTGTATAACCTTATGTC+TGG | - | chr6_4:4966710-4966729 | None:intergenic | 25.0% |
| ! | CTTTATAGAGGATTTCAATT+TGG | - | chr6_4:4967090-4967109 | None:intergenic | 25.0% |
| ! | TGACTGTTAAAACTTTATAG+AGG | - | chr6_4:4967102-4967121 | None:intergenic | 25.0% |
| ! | CAAAAACTGAATAGTTTCTT+TGG | + | chr6_4:4967221-4967240 | Msa0972670:intron | 25.0% |
| ! | CAAAAACTGAATAGTTTCTT+TGG | + | chr6_4:4967221-4967240 | Msa0972670:intron | 25.0% |
| ! | TGAAATCTTCTGTATAGTTT+AGG | + | chr6_4:4967368-4967387 | Msa0972670:intron | 25.0% |
| ! | AATATCTAACCAATTAGGAA+AGG | - | chr6_4:4968016-4968035 | None:intergenic | 25.0% |
| ! | TGCAAAACAATAACATATGT+TGG | - | chr6_4:4968100-4968119 | None:intergenic | 25.0% |
| ! | ACATCAACAATGCTTATTTA+AGG | + | chr6_4:4968140-4968159 | Msa0972670:CDS | 25.0% |
| ! | AATTGCTAAATATATACCCT+AGG | - | chr6_4:4968229-4968248 | None:intergenic | 25.0% |
| ! | GAAGTTGAAAACAATTAGAT+TGG | + | chr6_4:4968298-4968317 | Msa0972670:intron | 25.0% |
| !! | CATTTTCAAAAGAACAAACA+CGG | - | chr6_4:4968449-4968468 | None:intergenic | 25.0% |
| !! | TTGAACATTTGAAACCTATA+GGG | - | chr6_4:4968555-4968574 | None:intergenic | 25.0% |
| !! | ATTGAACATTTGAAACCTAT+AGG | - | chr6_4:4968556-4968575 | None:intergenic | 25.0% |
| !!! | AGATTCATTTTTGGTTTCAA+AGG | - | chr6_4:4968649-4968668 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTTAAAGCAACTT+TGG | - | chr6_4:4968726-4968745 | None:intergenic | 25.0% |
| CTTTATGTATTCTTCATCTC+AGG | + | chr6_4:4965108-4965127 | Msa0972670:intron | 30.0% | |
| AACAACAAAACTCATACTTG+TGG | + | chr6_4:4965134-4965153 | Msa0972670:intron | 30.0% | |
| ATGCATTACAACATTTCTCT+AGG | + | chr6_4:4965471-4965490 | Msa0972670:intron | 30.0% | |
| TGCATTACAACATTTCTCTA+GGG | + | chr6_4:4965472-4965491 | Msa0972670:intron | 30.0% | |
| ! | CTCAACTAATTTGAGTTAGT+TGG | + | chr6_4:4965875-4965894 | Msa0972670:intron | 30.0% |
| ! | AACTAATTTGAGTTAGTTGG+AGG | + | chr6_4:4965878-4965897 | Msa0972670:intron | 30.0% |
| AGTTTAAACCTAGTTGAAAG+AGG | + | chr6_4:4965905-4965924 | Msa0972670:intron | 30.0% | |
| GGGATGTTAATTCTATACAT+AGG | + | chr6_4:4966055-4966074 | Msa0972670:intron | 30.0% | |
| GGAATTATAATCCAGTAAGT+CGG | + | chr6_4:4966164-4966183 | Msa0972670:intron | 30.0% | |
| GAATAGAGTTGAAGGTAAAA+TGG | + | chr6_4:4966349-4966368 | Msa0972670:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr6_4:4966569-4966588 | Msa0972670:intron | 30.0% | |
| TTGTAGTTTCTGCAAAATCA+TGG | - | chr6_4:4966628-4966647 | None:intergenic | 30.0% | |
| TAATCATGATACCAGACATA+AGG | + | chr6_4:4966696-4966715 | Msa0972670:intron | 30.0% | |
| AGTATGTATAGCCATATGTT+AGG | + | chr6_4:4966762-4966781 | Msa0972670:intron | 30.0% | |
| AAAGCTTCATATCAATTGCT+TGG | + | chr6_4:4967013-4967032 | Msa0972670:intron | 30.0% | |
| TAGTAATCAAGCAATTCATG+TGG | - | chr6_4:4967261-4967280 | None:intergenic | 30.0% | |
| TAGTAATCAAGCAATTCATG+TGG | - | chr6_4:4967261-4967280 | None:intergenic | 30.0% | |
| ! | CTTTACAGAGGATTTTCATT+TGG | - | chr6_4:4967408-4967427 | None:intergenic | 30.0% |
| TGATTGTCAAAACTTTACAG+AGG | - | chr6_4:4967420-4967439 | None:intergenic | 30.0% | |
| ACTTTGTGCAACAATTCATT+TGG | + | chr6_4:4967613-4967632 | Msa0972670:intron | 30.0% | |
| GTTTCATATCCTTTCCTAAT+TGG | + | chr6_4:4968004-4968023 | Msa0972670:intron | 30.0% | |
| !! | ATTGTTTTGCAACAGTTGAA+AGG | + | chr6_4:4968109-4968128 | Msa0972670:intron | 30.0% |
| TTTAAGGAACTTATGCAATG+AGG | + | chr6_4:4968156-4968175 | Msa0972670:CDS | 30.0% | |
| AAACCAAACAAAAAGCAAAG+AGG | - | chr6_4:4968751-4968770 | None:intergenic | 30.0% | |
| AGTACTTCAGTTTAGCAAAT+TGG | + | chr6_4:4968965-4968984 | Msa0972670:three_prime_UTR | 30.0% | |
| TCTAACAAACACATTAGAGC+TGG | + | chr6_4:4965010-4965029 | Msa0972670:five_prime_UTR | 35.0% | |
| AAACACATTAGAGCTGGAAT+TGG | + | chr6_4:4965016-4965035 | Msa0972670:five_prime_UTR | 35.0% | |
| CAGAAAAAACCCGTCAAATT+GGG | - | chr6_4:4965178-4965197 | None:intergenic | 35.0% | |
| ACAGAAAAAACCCGTCAAAT+TGG | - | chr6_4:4965179-4965198 | None:intergenic | 35.0% | |
| ATTGAGTTTGGGTATGAGTT+TGG | + | chr6_4:4965203-4965222 | Msa0972670:intron | 35.0% | |
| ! | TTTTCCGCGATTTCAAAACA+CGG | + | chr6_4:4965227-4965246 | Msa0972670:intron | 35.0% |
| ! | ATAATTTTCTGCATTCGGGA+CGG | - | chr6_4:4965306-4965325 | None:intergenic | 35.0% |
| GCATTACAACATTTCTCTAG+GGG | + | chr6_4:4965473-4965492 | Msa0972670:intron | 35.0% | |
| GTTCAATTTATCATCCCCAT+TGG | + | chr6_4:4965591-4965610 | Msa0972670:intron | 35.0% | |
| ! | TTTATCATCCCCATTGGTTA+TGG | + | chr6_4:4965597-4965616 | Msa0972670:intron | 35.0% |
| ! | TTATCATCCCCATTGGTTAT+GGG | + | chr6_4:4965598-4965617 | Msa0972670:intron | 35.0% |
| ACGAGTAAGTATACGAGAAT+TGG | + | chr6_4:4965628-4965647 | Msa0972670:intron | 35.0% | |
| CGAGTAAGTATACGAGAATT+GGG | + | chr6_4:4965629-4965648 | Msa0972670:intron | 35.0% | |
| AAGTATACGAGAATTGGGTA+TGG | + | chr6_4:4965634-4965653 | Msa0972670:intron | 35.0% | |
| AAAAATAGCAGAAGTAGGCA+TGG | - | chr6_4:4965699-4965718 | None:intergenic | 35.0% | |
| ! | ATGTGACATTTTGAGCATGA+AGG | - | chr6_4:4966256-4966275 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | + | chr6_4:4966574-4966593 | Msa0972670:intron | 35.0% | |
| TAGTTTCTGCAAAATCATGG+TGG | - | chr6_4:4966625-4966644 | None:intergenic | 35.0% | |
| TATAGCCATATGTTAGGTTC+TGG | + | chr6_4:4966768-4966787 | Msa0972670:intron | 35.0% | |
| ATAGAGGATTTCAATTTGGC+AGG | - | chr6_4:4967086-4967105 | None:intergenic | 35.0% | |
| CTGAATAGTTTCTTTGGTGA+CGG | + | chr6_4:4967227-4967246 | Msa0972670:intron | 35.0% | |
| ! | ACAGAGGATTTTCATTTGGT+AGG | - | chr6_4:4967404-4967423 | None:intergenic | 35.0% |
| TCTTGTATCCTTGAGTTTGA+TGG | + | chr6_4:4967517-4967536 | Msa0972670:CDS | 35.0% | |
| CTATACTGCGTACTGAAAAT+GGG | + | chr6_4:4967578-4967597 | Msa0972670:CDS | 35.0% | |
| AAGCTGTAAGGAAAGGATAT+AGG | + | chr6_4:4967770-4967789 | Msa0972670:intron | 35.0% | |
| TATAGGAACATCACTGTCTA+CGG | + | chr6_4:4967787-4967806 | Msa0972670:intron | 35.0% | |
| ! | GACCTGATTGATAACAAGTT+CGG | - | chr6_4:4967818-4967837 | None:intergenic | 35.0% |
| !!! | CCTTTCGGTTTTTTGAGAAA+GGG | - | chr6_4:4967966-4967985 | None:intergenic | 35.0% |
| ATGAATTCAAAGGAGCCTTT+CGG | - | chr6_4:4967981-4968000 | None:intergenic | 35.0% | |
| TGCAACAGTTGAAAGGTTTA+TGG | + | chr6_4:4968116-4968135 | Msa0972670:intron | 35.0% | |
| ! | TCAGCATCTTTTACATTCCT+AGG | + | chr6_4:4968209-4968228 | Msa0972670:CDS | 35.0% |
| ! | CAGCATCTTTTACATTCCTA+GGG | + | chr6_4:4968210-4968229 | Msa0972670:CDS | 35.0% |
| ! | ACGGTATTTGTTAACTGTTG+AGG | - | chr6_4:4968430-4968449 | None:intergenic | 35.0% |
| CATTGCAGTTCTTGTTCATT+AGG | - | chr6_4:4968589-4968608 | None:intergenic | 35.0% | |
| AAATGGTTTCAAAGCAGCTT+TGG | - | chr6_4:4968620-4968639 | None:intergenic | 35.0% | |
| GGTTTCAAAGGATGCTTAAA+TGG | - | chr6_4:4968637-4968656 | None:intergenic | 35.0% | |
| ! | CAAAAAGCAAAGAGGCTTTT+TGG | - | chr6_4:4968743-4968762 | None:intergenic | 35.0% |
| !!! | AAGCCTCTTTGCTTTTTGTT+TGG | + | chr6_4:4968745-4968764 | Msa0972670:intron | 35.0% |
| ATGAATTAACGATCATCCGA+CGG | + | chr6_4:4968892-4968911 | Msa0972670:exon | 35.0% | |
| ATGCCACTGTCAAAAACTAT+TGG | + | chr6_4:4968916-4968935 | Msa0972670:three_prime_UTR | 35.0% | |
| ! | TTGCCAATAGTTTTTGACAG+TGG | - | chr6_4:4968922-4968941 | None:intergenic | 35.0% |
| ACTTCAGTTTAGCAAATTGG+TGG | + | chr6_4:4968968-4968987 | Msa0972670:three_prime_UTR | 35.0% | |
| AAAACCCGTCAAATTGGGTT+TGG | - | chr6_4:4965173-4965192 | None:intergenic | 40.0% | |
| TTTCCGCGATTTCAAAACAC+GGG | + | chr6_4:4965228-4965247 | Msa0972670:intron | 40.0% | |
| !!! | ATACCCGTGTTTTGAAATCG+CGG | - | chr6_4:4965234-4965253 | None:intergenic | 40.0% |
| CGATTTCAAAACACGGGTAT+GGG | + | chr6_4:4965234-4965253 | Msa0972670:intron | 40.0% | |
| ! | TAATTTTCTGCATTCGGGAC+GGG | - | chr6_4:4965305-4965324 | None:intergenic | 40.0% |
| AAATTATTCAATGCGGGGAC+AGG | + | chr6_4:4965526-4965545 | Msa0972670:intron | 40.0% | |
| AATTATTCAATGCGGGGACA+GGG | + | chr6_4:4965527-4965546 | Msa0972670:intron | 40.0% | |
| TTACCCTACCCATAACCAAT+GGG | - | chr6_4:4965609-4965628 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAATTGGTA+AGG | + | chr6_4:4966547-4966566 | Msa0972670:intron | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | + | chr6_4:4966575-4966594 | Msa0972670:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | + | chr6_4:4966576-4966595 | Msa0972670:intron | 40.0% | |
| CTAGTCCAGAACCTAACATA+TGG | - | chr6_4:4966776-4966795 | None:intergenic | 40.0% | |
| !! | CATATGTTAGGTTCTGGACT+AGG | + | chr6_4:4966774-4966793 | Msa0972670:intron | 40.0% |
| GCTATACTGCGTACTGAAAA+TGG | + | chr6_4:4967577-4967596 | Msa0972670:CDS | 40.0% | |
| ! | TTTGATAACCAAGTCCTTCG+CGG | - | chr6_4:4967705-4967724 | None:intergenic | 40.0% |
| !!! | GAGTATCGCGCATTGATTTT+AGG | + | chr6_4:4967739-4967758 | Msa0972670:intron | 40.0% |
| TAGGACTGAAACAAGCTGTA+AGG | + | chr6_4:4967758-4967777 | Msa0972670:intron | 40.0% | |
| CTGAAACAAGCTGTAAGGAA+AGG | + | chr6_4:4967763-4967782 | Msa0972670:intron | 40.0% | |
| !! | CTCCGAACTTGTTATCAATC+AGG | + | chr6_4:4967813-4967832 | Msa0972670:intron | 40.0% |
| CCCTTTCTCAAAAAACCGAA+AGG | + | chr6_4:4967963-4967982 | Msa0972670:intron | 40.0% | |
| !!! | GCCTTTCGGTTTTTTGAGAA+AGG | - | chr6_4:4967967-4967986 | None:intergenic | 40.0% |
| GAACTTATGCAATGAGGCTT+TGG | + | chr6_4:4968162-4968181 | Msa0972670:CDS | 40.0% | |
| AAGCTGATGCTCAAGCAAAT+CGG | + | chr6_4:4968488-4968507 | Msa0972670:CDS | 40.0% | |
| AGGGACTACGAAAAGTCTTA+AGG | - | chr6_4:4968536-4968555 | None:intergenic | 40.0% | |
| ! | AGACTTTTCGTAGTCCCTAT+AGG | + | chr6_4:4968538-4968557 | Msa0972670:intron | 40.0% |
| GTGCAGAGTTCTGCTATATT+AGG | - | chr6_4:4968693-4968712 | None:intergenic | 40.0% | |
| !! | ATAGTGGGCATCTACACATT+AGG | - | chr6_4:4969058-4969077 | None:intergenic | 40.0% |
| ATGCCCACTATTAGCAGTTT+AGG | + | chr6_4:4969067-4969086 | Msa0972670:three_prime_UTR | 40.0% | |
| TGCCCACTATTAGCAGTTTA+GGG | + | chr6_4:4969068-4969087 | Msa0972670:three_prime_UTR | 40.0% | |
| GTCCCTAAACTGCTAATAGT+GGG | - | chr6_4:4969073-4969092 | None:intergenic | 40.0% | |
| AGTCCCTAAACTGCTAATAG+TGG | - | chr6_4:4969074-4969093 | None:intergenic | 40.0% | |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | - | chr6_4:4965167-4965186 | None:intergenic | 45.0% |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | - | chr6_4:4965168-4965187 | None:intergenic | 45.0% |
| CCGAACCAAACCCAATTTGA+CGG | + | chr6_4:4965165-4965184 | Msa0972670:intron | 45.0% | |
| CGAACCAAACCCAATTTGAC+GGG | + | chr6_4:4965166-4965185 | Msa0972670:intron | 45.0% | |
| GCGATTTCAAAACACGGGTA+TGG | + | chr6_4:4965233-4965252 | Msa0972670:intron | 45.0% | |
| TTTGAGTATGGGTTCAGGGT+GGG | - | chr6_4:4965282-4965301 | None:intergenic | 45.0% | |
| ! | ATCCCCATTGGTTATGGGTA+GGG | + | chr6_4:4965603-4965622 | Msa0972670:intron | 45.0% |
| TACCCTACCCATAACCAATG+GGG | - | chr6_4:4965608-4965627 | None:intergenic | 45.0% | |
| GTTACCCTACCCATAACCAA+TGG | - | chr6_4:4965610-4965629 | None:intergenic | 45.0% | |
| ACGAGAATTGGGTATGGAGA+TGG | + | chr6_4:4965640-4965659 | Msa0972670:intron | 45.0% | |
| CGAGAATTGGGTATGGAGAT+GGG | + | chr6_4:4965641-4965660 | Msa0972670:intron | 45.0% | |
| GAGAATTGGGTATGGAGATG+GGG | + | chr6_4:4965642-4965661 | Msa0972670:intron | 45.0% | |
| CAATACCACAACGATGCATC+TGG | - | chr6_4:4966132-4966151 | None:intergenic | 45.0% | |
| GTGGTATTGCAATCGTAGAG+AGG | + | chr6_4:4966143-4966162 | Msa0972670:CDS | 45.0% | |
| CATCGTGAGCTTAGCTCAAT+TGG | + | chr6_4:4966542-4966561 | Msa0972670:intron | 45.0% | |
| GTGATTCTGAGTTTGAACCC+CGG | - | chr6_4:4966596-4966615 | None:intergenic | 45.0% | |
| !! | TGTTAGGTTCTGGACTAGGT+AGG | + | chr6_4:4966778-4966797 | Msa0972670:intron | 45.0% |
| CAAGCAATTCATGTGGAGCT+TGG | - | chr6_4:4967254-4967273 | None:intergenic | 45.0% | |
| CAAGCAATTCATGTGGAGCT+TGG | - | chr6_4:4967254-4967273 | None:intergenic | 45.0% | |
| TTCAGTACGCAGTATAGCTC+CGG | - | chr6_4:4967575-4967594 | None:intergenic | 45.0% | |
| !! | CAATGAGGCTTTGGAGCTAA+GGG | + | chr6_4:4968171-4968190 | Msa0972670:CDS | 45.0% |
| GCAGTGCTCAATTGAGAAAG+AGG | - | chr6_4:4968273-4968292 | None:intergenic | 45.0% | |
| AGCTGATGCTCAAGCAAATC+GGG | + | chr6_4:4968489-4968508 | Msa0972670:CDS | 45.0% | |
| GGTCTAACCTCCAAGAAAGA+TGG | - | chr6_4:4968515-4968534 | None:intergenic | 45.0% | |
| TGGTGGTTTCACATGTGAAC+TGG | + | chr6_4:4968985-4969004 | Msa0972670:three_prime_UTR | 45.0% | |
| CATGTGAACTGGCATGTCAA+AGG | + | chr6_4:4968996-4969015 | Msa0972670:three_prime_UTR | 45.0% | |
| GAGAGAGAAATCACGACCAG+TGG | + | chr6_4:4965054-4965073 | Msa0972670:five_prime_UTR | 50.0% | |
| !! | AAATTGGGTTTGGTTCGGGC+AGG | - | chr6_4:4965163-4965182 | None:intergenic | 50.0% |
| CACGGGTATGGGACAGATAA+CGG | + | chr6_4:4965245-4965264 | Msa0972670:intron | 50.0% | |
| ACGGGTATGGGACAGATAAC+GGG | + | chr6_4:4965246-4965265 | Msa0972670:intron | 50.0% | |
| GTTTGAGTATGGGTTCAGGG+TGG | - | chr6_4:4965283-4965302 | None:intergenic | 50.0% | |
| CGGGTTTGAGTATGGGTTCA+GGG | - | chr6_4:4965286-4965305 | None:intergenic | 50.0% | |
| ACGGGTTTGAGTATGGGTTC+AGG | - | chr6_4:4965287-4965306 | None:intergenic | 50.0% | |
| ! | TTCGGGACGGGTTTGAGTAT+GGG | - | chr6_4:4965293-4965312 | None:intergenic | 50.0% |
| ! | ATTCGGGACGGGTTTGAGTA+TGG | - | chr6_4:4965294-4965313 | None:intergenic | 50.0% |
| ! | CATCCCCATTGGTTATGGGT+AGG | + | chr6_4:4965602-4965621 | Msa0972670:intron | 50.0% |
| CAGAAGTAGGCATGGCAATG+GGG | - | chr6_4:4965691-4965710 | None:intergenic | 50.0% | |
| GCAGAAGTAGGCATGGCAAT+GGG | - | chr6_4:4965692-4965711 | None:intergenic | 50.0% | |
| AGCAGAAGTAGGCATGGCAA+TGG | - | chr6_4:4965693-4965712 | None:intergenic | 50.0% | |
| CTTGTCCAGATGCATCGTTG+TGG | + | chr6_4:4966124-4966143 | Msa0972670:intron | 50.0% | |
| TGGCTGCACCATCAAACTCA+AGG | - | chr6_4:4967528-4967547 | None:intergenic | 50.0% | |
| GCGTACTGAAAATGGGAGTC+TGG | + | chr6_4:4967585-4967604 | Msa0972670:CDS | 50.0% | |
| !! | TAGCTCTATCGATTCCGCGA+AGG | + | chr6_4:4967688-4967707 | Msa0972670:intron | 50.0% |
| !! | TATCGATTCCGCGAAGGACT+TGG | + | chr6_4:4967694-4967713 | Msa0972670:intron | 50.0% |
| !! | GCAATGAGGCTTTGGAGCTA+AGG | + | chr6_4:4968170-4968189 | Msa0972670:CDS | 50.0% |
| GCAAATCGGGCCATCTTTCT+TGG | + | chr6_4:4968502-4968521 | Msa0972670:CDS | 50.0% | |
| AATCGGGCCATCTTTCTTGG+AGG | + | chr6_4:4968505-4968524 | Msa0972670:CDS | 50.0% | |
| ! | TTTTGACAGTGGCATGCCGT+CGG | - | chr6_4:4968911-4968930 | None:intergenic | 50.0% |
| ATTCAATGCGGGGACAGGGA+TGG | + | chr6_4:4965531-4965550 | Msa0972670:intron | 55.0% | |
| AAGTAGGCATGGCAATGGGG+CGG | - | chr6_4:4965688-4965707 | None:intergenic | 55.0% | |
| !! | GAGTTTGATGGTGCAGCCAG+CGG | + | chr6_4:4967529-4967548 | Msa0972670:CDS | 55.0% |
| !! | AGTTTGATGGTGCAGCCAGC+GGG | + | chr6_4:4967530-4967549 | Msa0972670:CDS | 55.0% |
| GACCAGTGGAAACGCGAGAG+AGG | + | chr6_4:4965068-4965087 | Msa0972670:five_prime_UTR | 60.0% | |
| CACCTCTCTCGCGTTTCCAC+TGG | - | chr6_4:4965073-4965092 | None:intergenic | 60.0% | |
| AACTCCATCCCCATCCCCGA+CGG | - | chr6_4:4965574-4965593 | None:intergenic | 60.0% | |
| AGTAGGCATGGCAATGGGGC+GGG | - | chr6_4:4965687-4965706 | None:intergenic | 60.0% | |
| AGTATAGCTCCGGCACCAGC+TGG | - | chr6_4:4967565-4967584 | None:intergenic | 60.0% | |
| ATGCGGGGACAGGGATGGAG+CGG | + | chr6_4:4965536-4965555 | Msa0972670:intron | 65.0% | |
| ATACCCGAACCCGTCGGGGA+TGG | + | chr6_4:4965561-4965580 | Msa0972670:intron | 65.0% | |
| TACCCGAACCCGTCGGGGAT+GGG | + | chr6_4:4965562-4965581 | Msa0972670:intron | 65.0% | |
| ! | ATCCCCATCCCCGACGGGTT+CGG | - | chr6_4:4965568-4965587 | None:intergenic | 65.0% |
| ACTCCATCCCCATCCCCGAC+GGG | - | chr6_4:4965573-4965592 | None:intergenic | 65.0% | |
| GTAGGCATGGCAATGGGGCG+GGG | - | chr6_4:4965686-4965705 | None:intergenic | 65.0% | |
| AATCCCGGACCAGCTGGTGC+CGG | + | chr6_4:4967553-4967572 | Msa0972670:CDS | 65.0% | |
| TGCGGGGACAGGGATGGAGC+GGG | + | chr6_4:4965537-4965556 | Msa0972670:intron | 70.0% | |
| GCGGGGATACCCGAACCCGT+CGG | + | chr6_4:4965555-4965574 | Msa0972670:intron | 70.0% | |
| CGGGGATACCCGAACCCGTC+GGG | + | chr6_4:4965556-4965575 | Msa0972670:intron | 70.0% | |
| GGGGATACCCGAACCCGTCG+GGG | + | chr6_4:4965557-4965576 | Msa0972670:intron | 70.0% | |
| ACCCGAACCCGTCGGGGATG+GGG | + | chr6_4:4965563-4965582 | Msa0972670:intron | 70.0% | |
| ! | TCCCCATCCCCGACGGGTTC+GGG | - | chr6_4:4965567-4965586 | None:intergenic | 70.0% |
| GAACCCGTCGGGGATGGGGA+TGG | + | chr6_4:4965567-4965586 | Msa0972670:intron | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | - | chr6_4:4965681-4965700 | None:intergenic | 70.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | - | chr6_4:4965682-4965701 | None:intergenic | 70.0% | |
| GGTGCAGCCAGCGGGAATCC+CGG | + | chr6_4:4967538-4967557 | Msa0972670:CDS | 70.0% | |
| AGCTGGTCCGGGATTCCCGC+TGG | - | chr6_4:4967548-4967567 | None:intergenic | 70.0% | |
| AGCGGGAATCCCGGACCAGC+TGG | + | chr6_4:4967547-4967566 | Msa0972670:CDS | 70.0% | |
| AGCTCCGGCACCAGCTGGTC+CGG | - | chr6_4:4967560-4967579 | None:intergenic | 70.0% | |
| GCGGGGACAGGGATGGAGCG+GGG | + | chr6_4:4965538-4965557 | Msa0972670:intron | 75.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | - | chr6_4:4965683-4965702 | None:intergenic | 75.0% | |
| GCTCCGGCACCAGCTGGTCC+GGG | - | chr6_4:4967559-4967578 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 4965009 | 4969148 | 4965009 | ID=Msa0972670;Name=Msa0972670 |
| chr6_4 | mRNA | 4965009 | 4969148 | 4965009 | ID=Msa0972670-mRNA-1;Parent=Msa0972670;Name=Msa0972670-mRNA-1;_AED=0.09;_eAED=0.09;_QI=81|0.8|1|1|0.2|0.5|6|248|109 |
| chr6_4 | exon | 4965009 | 4965089 | 4965009 | ID=Msa0972670-mRNA-1:exon:2115;Parent=Msa0972670-mRNA-1 |
| chr6_4 | exon | 4966133 | 4966177 | 4966133 | ID=Msa0972670-mRNA-1:exon:2116;Parent=Msa0972670-mRNA-1 |
| chr6_4 | exon | 4967514 | 4967606 | 4967514 | ID=Msa0972670-mRNA-1:exon:2117;Parent=Msa0972670-mRNA-1 |
| chr6_4 | exon | 4968124 | 4968231 | 4968124 | ID=Msa0972670-mRNA-1:exon:2118;Parent=Msa0972670-mRNA-1 |
| chr6_4 | exon | 4968475 | 4968526 | 4968475 | ID=Msa0972670-mRNA-1:exon:2119;Parent=Msa0972670-mRNA-1 |
| chr6_4 | exon | 4968869 | 4969148 | 4968869 | ID=Msa0972670-mRNA-1:exon:2120;Parent=Msa0972670-mRNA-1 |
| chr6_4 | five_prime_UTR | 4965009 | 4965089 | 4965009 | ID=Msa0972670-mRNA-1:five_prime_utr;Parent=Msa0972670-mRNA-1 |
| chr6_4 | CDS | 4966133 | 4966177 | 4966133 | ID=Msa0972670-mRNA-1:cds;Parent=Msa0972670-mRNA-1 |
| chr6_4 | CDS | 4967514 | 4967606 | 4967514 | ID=Msa0972670-mRNA-1:cds;Parent=Msa0972670-mRNA-1 |
| chr6_4 | CDS | 4968124 | 4968231 | 4968124 | ID=Msa0972670-mRNA-1:cds;Parent=Msa0972670-mRNA-1 |
| chr6_4 | CDS | 4968475 | 4968526 | 4968475 | ID=Msa0972670-mRNA-1:cds;Parent=Msa0972670-mRNA-1 |
| chr6_4 | CDS | 4968869 | 4968900 | 4968869 | ID=Msa0972670-mRNA-1:cds;Parent=Msa0972670-mRNA-1 |
| chr6_4 | three_prime_UTR | 4968901 | 4969148 | 4968901 | ID=Msa0972670-mRNA-1:three_prime_utr;Parent=Msa0972670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
