Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651250 | XP_003607878.1 | 98.266 | 173 | 2 | 1 | 1 | 172 | 1 | 173 | 2.64e-121 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651250 | sp|Q93VA3|CYC6_ARATH | 67.333 | 150 | 48 | 1 | 21 | 170 | 27 | 175 | 3.98e-73 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651250 | A2Q293 | 98.266 | 173 | 2 | 1 | 1 | 172 | 1 | 173 | 1.26e-121 | 349 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024070 | Msa0651250 | 0.833231 | 6.005165e-56 | -8.615850e-47 |
| Msa0025340 | Msa0651250 | 0.807467 | 4.984669e-50 | -8.615850e-47 |
| Msa0044700 | Msa0651250 | 0.808931 | 2.430552e-50 | -8.615850e-47 |
| Msa0052180 | Msa0651250 | 0.810543 | 1.093872e-50 | -8.615850e-47 |
| Msa0074910 | Msa0651250 | 0.803466 | 3.439452e-49 | -8.615850e-47 |
| Msa0075080 | Msa0651250 | 0.802729 | 4.885836e-49 | -8.615850e-47 |
| Msa0093830 | Msa0651250 | 0.812359 | 4.410600e-51 | -8.615850e-47 |
| Msa0097220 | Msa0651250 | 0.816073 | 6.673419e-52 | -8.615850e-47 |
| Msa0102290 | Msa0651250 | 0.827583 | 1.443754e-54 | -8.615850e-47 |
| Msa0605670 | Msa0651250 | 0.807778 | 4.280893e-50 | -8.615850e-47 |
| Msa0610610 | Msa0651250 | 0.929384 | 7.511401e-93 | -8.615850e-47 |
| Msa0616570 | Msa0651250 | 0.808583 | 2.884152e-50 | -8.615850e-47 |
| Msa0639040 | Msa0651250 | 0.825152 | 5.478416e-54 | -8.615850e-47 |
| Msa0646710 | Msa0651250 | 0.811118 | 8.215589e-51 | -8.615850e-47 |
| Msa0649140 | Msa0651250 | 0.832900 | 7.260172e-56 | -8.615850e-47 |
| Msa0651250 | Msa0655980 | 0.809059 | 2.281633e-50 | -8.615850e-47 |
| Msa0651250 | Msa0693250 | 0.927306 | 1.412943e-91 | -8.615850e-47 |
| Msa0651250 | Msa0694810 | 0.813841 | 2.086587e-51 | -8.615850e-47 |
| Msa0651250 | Msa0695470 | 0.801084 | 1.063793e-48 | -8.615850e-47 |
| Msa0651250 | Msa0699900 | 0.810706 | 1.008589e-50 | -8.615850e-47 |
| Msa0651250 | Msa0748470 | 0.807765 | 4.308776e-50 | -8.615850e-47 |
| Msa0651250 | Msa0762860 | 0.817038 | 4.057351e-52 | -8.615850e-47 |
| Msa0651250 | Msa0762900 | 0.826790 | 2.236256e-54 | -8.615850e-47 |
| Msa0651250 | Msa0772530 | 0.800446 | 1.436032e-48 | -8.615850e-47 |
| Msa0651250 | Msa0799150 | 0.814391 | 1.577773e-51 | -8.615850e-47 |
| Msa0651250 | Msa0842660 | 0.805356 | 1.388693e-49 | -8.615850e-47 |
| Msa0651250 | Msa0868500 | 0.801247 | 9.851307e-49 | -8.615850e-47 |
| Msa0651250 | Msa0880200 | 0.811576 | 6.534930e-51 | -8.615850e-47 |
| Msa0651250 | Msa0940400 | 0.804531 | 2.065565e-49 | -8.615850e-47 |
| Msa0651250 | Msa0959970 | 0.819707 | 1.008190e-52 | -8.615850e-47 |
| Msa0651250 | Msa0967940 | 0.808649 | 2.791518e-50 | -8.615850e-47 |
| Msa0651250 | Msa0978540 | 0.808133 | 3.596658e-50 | -8.615850e-47 |
| Msa0651250 | Msa0985570 | 0.824371 | 8.370684e-54 | -8.615850e-47 |
| Msa0651250 | Msa1126320 | 0.803558 | 3.292355e-49 | -8.615850e-47 |
| Msa0651250 | Msa1126980 | 0.802053 | 6.732125e-49 | -8.615850e-47 |
| Msa0651250 | Msa1134840 | 0.825804 | 3.838975e-54 | -8.615850e-47 |
| Msa0651250 | Msa1177300 | 0.812292 | 4.562369e-51 | -8.615850e-47 |
| Msa0651250 | Msa1190670 | 0.808391 | 3.169968e-50 | -8.615850e-47 |
| Msa0651250 | Msa1197210 | 0.804694 | 1.910237e-49 | -8.615850e-47 |
| Msa0651250 | Msa1211930 | 0.804115 | 2.521995e-49 | -8.615850e-47 |
| Msa0651250 | Msa1222020 | 0.805482 | 1.306717e-49 | -8.615850e-47 |
| Msa0651250 | Msa1223050 | 0.810946 | 8.948459e-51 | -8.615850e-47 |
| Msa0651250 | Msa1223520 | 0.804145 | 2.485736e-49 | -8.615850e-47 |
| Msa0651250 | Msa1225280 | 0.801070 | 1.071051e-48 | -8.615850e-47 |
| Msa0651250 | Msa1236090 | 0.801173 | 1.020427e-48 | -8.615850e-47 |
| Msa0651250 | Msa1244940 | 0.817786 | 2.753235e-52 | -8.615850e-47 |
| Msa0651250 | Msa1263600 | 0.800186 | 1.622269e-48 | -8.615850e-47 |
| Msa0651250 | Msa1267560 | 0.800351 | 1.501125e-48 | -8.615850e-47 |
| Msa0651250 | Msa1297550 | 0.800852 | 1.186337e-48 | -8.615850e-47 |
| Msa0651250 | Msa1317090 | 0.801158 | 1.027214e-48 | -8.615850e-47 |
| Msa0651250 | Msa1325260 | 0.819792 | 9.643542e-53 | -8.615850e-47 |
| Msa0651250 | Msa1325270 | 0.816047 | 6.764579e-52 | -8.615850e-47 |
| Msa0651250 | Msa1334690 | 0.807624 | 4.615721e-50 | -8.615850e-47 |
| Msa0651250 | Msa1349720 | 0.817396 | 3.370491e-52 | -8.615850e-47 |
| Msa0651250 | Msa1364650 | 0.801869 | 7.344473e-49 | -8.615850e-47 |
| Msa0651250 | Msa1371690 | 0.801133 | 1.039389e-48 | -8.615850e-47 |
| Msa0651250 | Msa1375120 | 0.813235 | 2.835784e-51 | -8.615850e-47 |
| Msa0651250 | Msa1376510 | 0.803724 | 3.041524e-49 | -8.615850e-47 |
| Msa0651250 | Msa1386820 | 0.805696 | 1.178654e-49 | -8.615850e-47 |
| Msa0651250 | Msa1412750 | 0.807019 | 6.199868e-50 | -8.615850e-47 |
| Msa0651250 | Msa1444750 | 0.831133 | 1.983697e-55 | -8.615850e-47 |
| Msa0651250 | Msa1460340 | 0.805698 | 1.177347e-49 | -8.615850e-47 |
| Msa0651250 | Msa1462700 | 0.814162 | 1.772565e-51 | -8.615850e-47 |
| Msa0122930 | Msa0651250 | 0.800854 | 1.185283e-48 | -8.615850e-47 |
| Msa0147070 | Msa0651250 | 0.838664 | 2.514729e-57 | -8.615850e-47 |
| Msa0156260 | Msa0651250 | 0.804482 | 2.114829e-49 | -8.615850e-47 |
| Msa0170550 | Msa0651250 | 0.809626 | 1.724360e-50 | -8.615850e-47 |
| Msa0182940 | Msa0651250 | 0.821766 | 3.390331e-53 | -8.615850e-47 |
| Msa0185540 | Msa0651250 | 0.800032 | 1.743270e-48 | -8.615850e-47 |
| Msa0191180 | Msa0651250 | 0.804313 | 2.293726e-49 | -8.615850e-47 |
| Msa0237690 | Msa0651250 | 0.813395 | 2.616268e-51 | -8.615850e-47 |
| Msa0371050 | Msa0651250 | 0.818184 | 2.237928e-52 | -8.615850e-47 |
| Msa0375100 | Msa0651250 | 0.804271 | 2.340825e-49 | -8.615850e-47 |
| Msa0380470 | Msa0651250 | 0.816284 | 5.987737e-52 | -8.615850e-47 |
| Msa0384570 | Msa0651250 | 0.808031 | 3.781116e-50 | -8.615850e-47 |
| Msa0400890 | Msa0651250 | 0.811635 | 6.342936e-51 | -8.615850e-47 |
| Msa0404840 | Msa0651250 | 0.800248 | 1.575523e-48 | -8.615850e-47 |
| Msa0429990 | Msa0651250 | 0.802962 | 4.373715e-49 | -8.615850e-47 |
| Msa0439130 | Msa0651250 | 0.825887 | 3.667724e-54 | -8.615850e-47 |
| Msa0475080 | Msa0651250 | 0.804784 | 1.829355e-49 | -8.615850e-47 |
| Msa0480040 | Msa0651250 | 0.818941 | 1.506767e-52 | -8.615850e-47 |
| Msa0245690 | Msa0651250 | 0.807443 | 5.042609e-50 | -8.615850e-47 |
| Msa0266100 | Msa0651250 | 0.813579 | 2.383024e-51 | -8.615850e-47 |
| Msa0269790 | Msa0651250 | 0.828730 | 7.643680e-55 | -8.615850e-47 |
| Msa0275260 | Msa0651250 | 0.812045 | 5.164626e-51 | -8.615850e-47 |
| Msa0284980 | Msa0651250 | 0.815130 | 1.082322e-51 | -8.615850e-47 |
| Msa0353890 | Msa0651250 | 0.801458 | 8.918553e-49 | -8.615850e-47 |
| Msa0500580 | Msa0651250 | 0.812081 | 5.071808e-51 | -8.615850e-47 |
| Msa0521840 | Msa0651250 | 0.803602 | 3.222799e-49 | -8.615850e-47 |
| Msa0527420 | Msa0651250 | 0.811973 | 5.355761e-51 | -8.615850e-47 |
| Msa0555210 | Msa0651250 | 0.802134 | 6.480716e-49 | -8.615850e-47 |
| Msa0560380 | Msa0651250 | 0.811470 | 6.891051e-51 | -8.615850e-47 |
| Msa0562040 | Msa0651250 | 0.808448 | 3.081672e-50 | -8.615850e-47 |
| Msa0574450 | Msa0651250 | 0.806605 | 7.584219e-50 | -8.615850e-47 |
| Msa0578990 | Msa0651250 | 0.927234 | 1.561242e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651250 | MtrunA17_Chr4g0043621 | 98.266 | 173 | 2 | 1 | 1 | 172 | 1 | 173 | 2.43e-125 | 349 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651250 | AT5G45040.1 | 67.333 | 150 | 48 | 1 | 21 | 170 | 27 | 175 | 4.04e-74 | 220 |
Find 51 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTTGCTTGTCTGATTTC+TGG | 0.156602 | 4_3:-58620364 | Msa0651250:CDS |
| CTCTTTGGATATCTATTGTT+TGG | 0.198050 | 4_3:+58618155 | None:intergenic |
| GGCTGAGTTTGTCAAGTTAC+AGG | 0.238541 | 4_3:-58617445 | Msa0651250:CDS |
| TTGCGGTCCAGAAGAGTTAT+TGG | 0.258091 | 4_3:+58617257 | None:intergenic |
| GTCAAGTTACAGGCTGATAA+AGG | 0.319514 | 4_3:-58617435 | Msa0651250:CDS |
| GAATTATCCAATAACTCTTC+TGG | 0.320875 | 4_3:-58617264 | Msa0651250:three_prime_UTR |
| CAACCTGGAGTGGCGCAAAT+TGG | 0.326523 | 4_3:+58620163 | None:intergenic |
| CCGGGTAACACACTAGGAAT+TGG | 0.337660 | 4_3:+58620479 | None:intergenic |
| TGAACAATGTTGCTCCTCTT+TGG | 0.345483 | 4_3:+58618140 | None:intergenic |
| CCACGAGGGCAGTGCACATT+TGG | 0.345899 | 4_3:-58617501 | Msa0651250:CDS |
| TCTTTGGATATCTATTGTTT+GGG | 0.347185 | 4_3:+58618156 | None:intergenic |
| AAGTATAATGCACTTGTTAC+CGG | 0.356847 | 4_3:+58620460 | None:intergenic |
| ATCTACCGTGTCACGTACTA+TGG | 0.365275 | 4_3:-58617721 | Msa0651250:CDS |
| GTGCACATTTGGTGCTCGTT+TGG | 0.375964 | 4_3:-58617490 | Msa0651250:CDS |
| TCAGACAAGCAAGCTTCATT+TGG | 0.389961 | 4_3:+58620371 | None:intergenic |
| CCAACATATGAGGATATTCA+TGG | 0.412785 | 4_3:+58617198 | None:intergenic |
| CAATAATCCTGTCTCCATAA+AGG | 0.416161 | 4_3:-58620338 | Msa0651250:intron |
| TTGTTCAGCCAAACATGTAT+TGG | 0.417027 | 4_3:-58618124 | Msa0651250:CDS |
| AGATGAAGATATCAAGATAT+TGG | 0.420639 | 4_3:-58617466 | Msa0651250:CDS |
| CGTGACATCCAATACATGTT+TGG | 0.423635 | 4_3:+58618116 | None:intergenic |
| CGGGTAACACACTAGGAATT+GGG | 0.446434 | 4_3:+58620480 | None:intergenic |
| TATAGTTCTACGCAGGGGTT+TGG | 0.449832 | 4_3:-58617537 | Msa0651250:intron |
| TCAAGTTACAGGCTGATAAA+GGG | 0.462996 | 4_3:-58617434 | Msa0651250:CDS |
| TCTTGAGGATAACGTGAAAC+GGG | 0.463989 | 4_3:-58620284 | Msa0651250:intron |
| TTCTTGAGGATAACGTGAAA+CGG | 0.465850 | 4_3:-58620285 | Msa0651250:intron |
| TCTCCAATTTGCGCCACTCC+AGG | 0.479406 | 4_3:-58620166 | Msa0651250:intron |
| ACCAATCCATAATGAAAAGA+TGG | 0.486136 | 4_3:+58617359 | None:intergenic |
| AAAACTTATGCCAGGTAACA+TGG | 0.498173 | 4_3:-58620517 | None:intergenic |
| GCGTGCGTATCTCAGATAGA+TGG | 0.511591 | 4_3:+58620421 | None:intergenic |
| TTATGCCAGGTAACATGGAA+TGG | 0.547126 | 4_3:-58620512 | None:intergenic |
| AGAAAGGCAGCCGCAAGAGG+AGG | 0.570107 | 4_3:+58620196 | None:intergenic |
| AGTATAATGCACTTGTTACC+GGG | 0.573292 | 4_3:+58620461 | None:intergenic |
| CCAAATGTGCACTGCCCTCG+TGG | 0.576137 | 4_3:+58617501 | None:intergenic |
| TTGTTACCGGGTAACACACT+AGG | 0.581634 | 4_3:+58620473 | None:intergenic |
| CAACTTGGCTCCTCCTCTTG+CGG | 0.582072 | 4_3:-58620206 | Msa0651250:CDS |
| AGCAGAAAGGCAGCCGCAAG+AGG | 0.590194 | 4_3:+58620193 | None:intergenic |
| TGTATTGGATGTCACGATGC+AGG | 0.593033 | 4_3:-58618109 | Msa0651250:CDS |
| AAGAGGTAACCAACCTGGAG+TGG | 0.599652 | 4_3:+58620153 | None:intergenic |
| CGTGTCACGTACTATGGCAA+AGG | 0.616930 | 4_3:-58617715 | Msa0651250:CDS |
| CCAATTCCTAGTGTGTTACC+CGG | 0.619729 | 4_3:-58620479 | Msa0651250:five_prime_UTR |
| CAAACAATAGATATCCAAAG+AGG | 0.625176 | 4_3:-58618154 | Msa0651250:CDS |
| CTATGGCAAAGGAAGAATGC+CGG | 0.626553 | 4_3:-58617704 | Msa0651250:intron |
| AATTGGAGAAAATAGCAGAA+AGG | 0.628466 | 4_3:+58620180 | None:intergenic |
| CTTTGCCATAGTACGTGACA+CGG | 0.648192 | 4_3:+58617716 | None:intergenic |
| TATTCACAAAGGATTTACAA+AGG | 0.666724 | 4_3:-58617952 | Msa0651250:intron |
| GGTAAAGAGTGCATGCCACG+AGG | 0.676403 | 4_3:-58617516 | Msa0651250:CDS |
| ATCGTCTATATAATTAATTG+CGG | 0.680726 | 4_3:+58617240 | None:intergenic |
| GTAAAGAGTGCATGCCACGA+GGG | 0.681699 | 4_3:-58617515 | Msa0651250:CDS |
| AGTTACAGGCTGATAAAGGG+TGG | 0.682583 | 4_3:-58617431 | Msa0651250:CDS |
| GGGGTCAACTCTATTCACAA+AGG | 0.702168 | 4_3:-58617963 | Msa0651250:CDS |
| ATTGGATGTCACGATGCAGG+TGG | 0.703936 | 4_3:-58618106 | Msa0651250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATCAAAAAAACATAT+TGG | - | chr4_3:58619282-58619301 | Msa0651250:intron | 10.0% |
| !!! | TTATATTTTTGTATATGTTT+TGG | - | chr4_3:58620413-58620432 | Msa0651250:five_prime_UTR | 10.0% |
| !!! | TATATTTTTGTATATGTTTT+GGG | - | chr4_3:58620414-58620433 | Msa0651250:five_prime_UTR | 10.0% |
| !!! | AGTTTAGTATTTTAAAAAAG+AGG | + | chr4_3:58617579-58617598 | None:intergenic | 15.0% |
| !! | CATTTCTAAATTAAATTGAA+GGG | + | chr4_3:58618201-58618220 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACTCTACAATA+AGG | + | chr4_3:58618928-58618947 | None:intergenic | 15.0% |
| !! | ACATAACAATTAATATACTA+AGG | + | chr4_3:58618963-58618982 | None:intergenic | 15.0% |
| !!! | TCTTTCTTTTAATTTTCTTG+AGG | - | chr4_3:58617413-58617432 | Msa0651250:CDS | 20.0% |
| !! | TCTATATAGAGAAAATTGAA+TGG | - | chr4_3:58617795-58617814 | Msa0651250:intron | 20.0% |
| !! | CTATATAGAGAAAATTGAAT+GGG | - | chr4_3:58617796-58617815 | Msa0651250:intron | 20.0% |
| !!! | TTTTTTTAAAACTCAGTATC+CGG | + | chr4_3:58617874-58617893 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGCTTTGATTTAA+TGG | + | chr4_3:58617931-58617950 | None:intergenic | 20.0% |
| !! | CCATTTCTAAATTAAATTGA+AGG | + | chr4_3:58618202-58618221 | None:intergenic | 20.0% |
| !!! | CCTTCAATTTAATTTAGAAA+TGG | - | chr4_3:58618199-58618218 | Msa0651250:intron | 20.0% |
| !! | ACTTTGCATAAATTTCAATA+TGG | + | chr4_3:58618675-58618694 | None:intergenic | 20.0% |
| !! | ATATTGAAATTTATGCAAAG+TGG | - | chr4_3:58618674-58618693 | Msa0651250:intron | 20.0% |
| !!! | AAAGCACTAAATTTATCAAA+AGG | - | chr4_3:58619789-58619808 | Msa0651250:intron | 20.0% |
| !! | AAGCACTAAATTTATCAAAA+GGG | - | chr4_3:58619790-58619809 | Msa0651250:intron | 20.0% |
| !! | TATTCATATAAAAATTGCTC+TGG | - | chr4_3:58619873-58619892 | Msa0651250:intron | 20.0% |
| !! | TAAATGTTGTTCTATAGAAA+TGG | - | chr4_3:58619949-58619968 | Msa0651250:intron | 20.0% |
| !! | ATCGTCTATATAATTAATTG+CGG | + | chr4_3:58620475-58620494 | None:intergenic | 20.0% |
| ! | ACAAAACAAATAAGAGTGAA+TGG | + | chr4_3:58617641-58617660 | None:intergenic | 25.0% |
| !! | AGCATATTTTACTGTTTTAC+TGG | + | chr4_3:58617972-58617991 | None:intergenic | 25.0% |
| ! | TTCTAAATTAAATTGAAGGG+AGG | + | chr4_3:58618198-58618217 | None:intergenic | 25.0% |
| ! | AATGACTCGTTGAAAATTAA+AGG | - | chr4_3:58618245-58618264 | Msa0651250:intron | 25.0% |
| !! | AAACAATCATTTGTGTTTTG+AGG | - | chr4_3:58618335-58618354 | Msa0651250:intron | 25.0% |
| !!! | AACAATCATTTGTGTTTTGA+GGG | - | chr4_3:58618336-58618355 | Msa0651250:intron | 25.0% |
| !!! | TGAAGTTAGTTTTTTAGTCT+TGG | - | chr4_3:58618415-58618434 | Msa0651250:intron | 25.0% |
| !!! | ACAAATCAACTAGTTTTTTC+AGG | - | chr4_3:58618547-58618566 | Msa0651250:intron | 25.0% |
| ! | ATCAATGTTAAGATTGAAAG+AGG | + | chr4_3:58618706-58618725 | None:intergenic | 25.0% |
| ! | TCTTTCAATCTTAACATTGA+TGG | - | chr4_3:58618705-58618724 | Msa0651250:intron | 25.0% |
| !!! | TTTATTTTTCCTCTTGAACT+GGG | + | chr4_3:58619313-58619332 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTCCTCTTGAAC+TGG | + | chr4_3:58619314-58619333 | None:intergenic | 25.0% |
| ! | TCTTTGGATATCTATTGTTT+GGG | + | chr4_3:58619559-58619578 | None:intergenic | 25.0% |
| !!! | ATATATCTAGCTTTATGTTC+TGG | - | chr4_3:58619669-58619688 | Msa0651250:intron | 25.0% |
| ! | AAGGAGAAAAAAAAAGGAAA+GGG | + | chr4_3:58619726-58619745 | None:intergenic | 25.0% |
| ! | TATTCACAAAGGATTTACAA+AGG | - | chr4_3:58619760-58619779 | Msa0651250:intron | 25.0% |
| ! | AGCACTAAATTTATCAAAAG+GGG | - | chr4_3:58619791-58619810 | Msa0651250:intron | 25.0% |
| !!! | CATTGATTAGCTTTCATTTT+AGG | + | chr4_3:58619899-58619918 | None:intergenic | 25.0% |
| ! | AGATGAAGATATCAAGATAT+TGG | - | chr4_3:58620246-58620265 | Msa0651250:CDS | 25.0% |
| !!! | GTTGCTAAATCATTTTTGTT+CGG | + | chr4_3:58620320-58620339 | None:intergenic | 25.0% |
| ! | AAGTATAATGCACTTGTTAC+CGG | + | chr4_3:58617255-58617274 | None:intergenic | 30.0% |
| ! | AGCAATGTCTTTTACCTTTA+TGG | + | chr4_3:58617391-58617410 | None:intergenic | 30.0% |
| !! | AGTCAAGTTTTTCAACAACT+TGG | - | chr4_3:58617491-58617510 | Msa0651250:CDS | 30.0% |
| AATTGGAGAAAATAGCAGAA+AGG | + | chr4_3:58617535-58617554 | None:intergenic | 30.0% | |
| AGCAATTTGAACAAAAAAGC+GGG | + | chr4_3:58617604-58617623 | None:intergenic | 30.0% | |
| GAGCAATTTGAACAAAAAAG+CGG | + | chr4_3:58617605-58617624 | None:intergenic | 30.0% | |
| TTGTACAAACTAGAAAGTAG+TGG | - | chr4_3:58617687-58617706 | Msa0651250:intron | 30.0% | |
| AAACTGTAAAGAACCATCTT+AGG | - | chr4_3:58618083-58618102 | Msa0651250:intron | 30.0% | |
| GTTAAATCACAAACCTAAGA+TGG | + | chr4_3:58618099-58618118 | None:intergenic | 30.0% | |
| TAATGTTCAAAGATCCTACA+TGG | + | chr4_3:58618121-58618140 | None:intergenic | 30.0% | |
| !! | TGAAAATTAAAGGAGCATTG+TGG | - | chr4_3:58618255-58618274 | Msa0651250:intron | 30.0% |
| TGGACATACATTAGGAATTT+AGG | + | chr4_3:58618296-58618315 | None:intergenic | 30.0% | |
| AAACATCTTGGACATACATT+AGG | + | chr4_3:58618304-58618323 | None:intergenic | 30.0% | |
| GTGGGAGAAATTTATAAGTA+TGG | - | chr4_3:58618381-58618400 | Msa0651250:intron | 30.0% | |
| AACTTAAAAACTCCCAAAGT+TGG | - | chr4_3:58618460-58618479 | Msa0651250:intron | 30.0% | |
| TAAAGATGCCAAAAATTGTC+AGG | + | chr4_3:58618586-58618605 | None:intergenic | 30.0% | |
| ! | TTGTTTTCACTATAAAGCAG+GGG | + | chr4_3:58618652-58618671 | None:intergenic | 30.0% |
| !! | GTTGTTTTCACTATAAAGCA+GGG | + | chr4_3:58618653-58618672 | None:intergenic | 30.0% |
| AATGTTAAGATTGAAAGAGG+TGG | + | chr4_3:58618703-58618722 | None:intergenic | 30.0% | |
| ! | ATATAGAAGTTGATTGACCA+AGG | + | chr4_3:58618818-58618837 | None:intergenic | 30.0% |
| TGGTCAATCAACTTCTATAT+TGG | - | chr4_3:58618818-58618837 | Msa0651250:intron | 30.0% | |
| !!! | TTAGTATTTTTTCCTTCACC+AGG | - | chr4_3:58618982-58619001 | Msa0651250:intron | 30.0% |
| ! | GATGTTTGAGATGTAAACTA+AGG | + | chr4_3:58619048-58619067 | None:intergenic | 30.0% |
| ACATCTCAAACATCTTCTTA+CGG | - | chr4_3:58619054-58619073 | Msa0651250:intron | 30.0% | |
| CTTACGATACATATGGTTAT+TGG | + | chr4_3:58619119-58619138 | None:intergenic | 30.0% | |
| CAATAACCATATGTATCGTA+AGG | - | chr4_3:58619117-58619136 | Msa0651250:intron | 30.0% | |
| AAAATGAGTTTCAGCTAAGA+GGG | + | chr4_3:58619217-58619236 | None:intergenic | 30.0% | |
| TAAAATGAGTTTCAGCTAAG+AGG | + | chr4_3:58619218-58619237 | None:intergenic | 30.0% | |
| ! | TTACATGCTCATTGACTATT+TGG | + | chr4_3:58619347-58619366 | None:intergenic | 30.0% |
| AAATAGTCAATGAGCATGTA+AGG | - | chr4_3:58619346-58619365 | Msa0651250:intron | 30.0% | |
| ATTAATCAGAATCCTGAGTA+TGG | + | chr4_3:58619399-58619418 | None:intergenic | 30.0% | |
| TATAACAACTTCAAGTCGAT+TGG | + | chr4_3:58619478-58619497 | None:intergenic | 30.0% | |
| CTCTTTGGATATCTATTGTT+TGG | + | chr4_3:58619560-58619579 | None:intergenic | 30.0% | |
| CAAACAATAGATATCCAAAG+AGG | - | chr4_3:58619558-58619577 | Msa0651250:intron | 30.0% | |
| CAAGGAGAAAAAAAAAGGAA+AGG | + | chr4_3:58619727-58619746 | None:intergenic | 30.0% | |
| ! | TCTTTTCGAATTTGTGTAGA+CGG | - | chr4_3:58619838-58619857 | Msa0651250:intron | 30.0% |
| AGGATAATCATTAAAGCAGA+AGG | + | chr4_3:58620072-58620091 | None:intergenic | 30.0% | |
| ! | TCTCTTCCATCTTTTCATTA+TGG | - | chr4_3:58620347-58620366 | Msa0651250:CDS | 30.0% |
| ! | TCCATCTTTTCATTATGGAT+TGG | - | chr4_3:58620352-58620371 | Msa0651250:CDS | 30.0% |
| ACCAATCCATAATGAAAAGA+TGG | + | chr4_3:58620356-58620375 | None:intergenic | 30.0% | |
| !!! | TATGTTTTGGGTTGAGATAA+TGG | - | chr4_3:58620426-58620445 | Msa0651250:five_prime_UTR | 30.0% |
| GAATTATCCAATAACTCTTC+TGG | - | chr4_3:58620448-58620467 | Msa0651250:five_prime_UTR | 30.0% | |
| ! | AGTATAATGCACTTGTTACC+GGG | + | chr4_3:58617254-58617273 | None:intergenic | 35.0% |
| CAATAATCCTGTCTCCATAA+AGG | - | chr4_3:58617374-58617393 | Msa0651250:three_prime_UTR | 35.0% | |
| ! | TCTTTTACCTTTATGGAGAC+AGG | + | chr4_3:58617384-58617403 | None:intergenic | 35.0% |
| TTCTTGAGGATAACGTGAAA+CGG | - | chr4_3:58617427-58617446 | Msa0651250:CDS | 35.0% | |
| TAAAAAAGAGGTAACCAACC+TGG | + | chr4_3:58617567-58617586 | None:intergenic | 35.0% | |
| GCAATTTGAACAAAAAAGCG+GGG | + | chr4_3:58617603-58617622 | None:intergenic | 35.0% | |
| AAATAAGAGTGAATGGCATG+GGG | + | chr4_3:58617634-58617653 | None:intergenic | 35.0% | |
| CAAATAAGAGTGAATGGCAT+GGG | + | chr4_3:58617635-58617654 | None:intergenic | 35.0% | |
| ACAAATAAGAGTGAATGGCA+TGG | + | chr4_3:58617636-58617655 | None:intergenic | 35.0% | |
| AGCCCAACTAATTTGGTATT+GGG | + | chr4_3:58617773-58617792 | None:intergenic | 35.0% | |
| TAGCCCAACTAATTTGGTAT+TGG | + | chr4_3:58617774-58617793 | None:intergenic | 35.0% | |
| ! | ATAGACTAGCCCAACTAATT+TGG | + | chr4_3:58617780-58617799 | None:intergenic | 35.0% |
| GTGTAACTCAAAGTAATGCA+AGG | - | chr4_3:58618051-58618070 | Msa0651250:intron | 35.0% | |
| GGTTTGTGATTTAACCATGT+AGG | - | chr4_3:58618104-58618123 | Msa0651250:CDS | 35.0% | |
| ATTAAATTGAAGGGAGGACA+AGG | + | chr4_3:58618192-58618211 | None:intergenic | 35.0% | |
| TCCAAGATGTTTGTAAGTTC+AGG | - | chr4_3:58618312-58618331 | Msa0651250:intron | 35.0% | |
| TCCTGAACTTACAAACATCT+TGG | + | chr4_3:58618316-58618335 | None:intergenic | 35.0% | |
| TAACGTGACTATGGATTTGT+GGG | - | chr4_3:58618363-58618382 | Msa0651250:intron | 35.0% | |
| !! | TTAGTCTTGGTCTGTTTCAA+TGG | - | chr4_3:58618428-58618447 | Msa0651250:intron | 35.0% |
| ! | AAAAACTCCCAAAGTTGGTT+CGG | - | chr4_3:58618465-58618484 | Msa0651250:intron | 35.0% |
| GTCATGATACCAAATACCAT+TGG | + | chr4_3:58618510-58618529 | None:intergenic | 35.0% | |
| CCAAAAATTGTCAGGATCAA+AGG | + | chr4_3:58618578-58618597 | None:intergenic | 35.0% | |
| ! | CCTTTGATCCTGACAATTTT+TGG | - | chr4_3:58618575-58618594 | Msa0651250:intron | 35.0% |
| ! | TGTTTTCACTATAAAGCAGG+GGG | + | chr4_3:58618651-58618670 | None:intergenic | 35.0% |
| !! | GGTTGTTTTCACTATAAAGC+AGG | + | chr4_3:58618654-58618673 | None:intergenic | 35.0% |
| GGTTCTCATTACAGTGTTAA+TGG | - | chr4_3:58618726-58618745 | Msa0651250:intron | 35.0% | |
| TCCCTGCAATCTATTTATGT+GGG | - | chr4_3:58618894-58618913 | Msa0651250:intron | 35.0% | |
| ACCCACATAAATAGATTGCA+GGG | + | chr4_3:58618898-58618917 | None:intergenic | 35.0% | |
| GAACTAAACAAGGAAATTCC+TGG | + | chr4_3:58619003-58619022 | None:intergenic | 35.0% | |
| TTGACTGTGTGAACTAAACA+AGG | + | chr4_3:58619013-58619032 | None:intergenic | 35.0% | |
| TGAAGATATCATCATACCCA+AGG | + | chr4_3:58619171-58619190 | None:intergenic | 35.0% | |
| TGGGTATGATGATATCTTCA+AGG | - | chr4_3:58619171-58619190 | Msa0651250:intron | 35.0% | |
| GCAAGTAGCAAGTGATAAAT+AGG | - | chr4_3:58619420-58619439 | Msa0651250:intron | 35.0% | |
| TTGTTCAGCCAAACATGTAT+TGG | - | chr4_3:58619588-58619607 | Msa0651250:intron | 35.0% | |
| CTAGATATATCATGCCAAAG+GGG | + | chr4_3:58619659-58619678 | None:intergenic | 35.0% | |
| GCTAGATATATCATGCCAAA+GGG | + | chr4_3:58619660-58619679 | None:intergenic | 35.0% | |
| AGCTAGATATATCATGCCAA+AGG | + | chr4_3:58619661-58619680 | None:intergenic | 35.0% | |
| !!! | TCCTTTTTTTTTCTCCTTGC+AGG | - | chr4_3:58619728-58619747 | Msa0651250:intron | 35.0% |
| !!! | CCTTTTTTTTTCTCCTTGCA+GGG | - | chr4_3:58619729-58619748 | Msa0651250:intron | 35.0% |
| !!! | CTTTTTTTTTCTCCTTGCAG+GGG | - | chr4_3:58619730-58619749 | Msa0651250:intron | 35.0% |
| GTCTAAGTAAGACATCTTAC+CGG | + | chr4_3:58620030-58620049 | None:intergenic | 35.0% | |
| CTTACTTAGACTTCAGACAT+AGG | - | chr4_3:58620039-58620058 | Msa0651250:intron | 35.0% | |
| CCATAAGGCATAAACTATGA+AGG | + | chr4_3:58620092-58620111 | None:intergenic | 35.0% | |
| CCTTCATAGTTTATGCCTTA+TGG | - | chr4_3:58620089-58620108 | Msa0651250:intron | 35.0% | |
| TCAAGTTACAGGCTGATAAA+GGG | - | chr4_3:58620278-58620297 | Msa0651250:CDS | 35.0% | |
| ! | TTTTGTTCGGTTTCAATGCT+TGG | + | chr4_3:58620307-58620326 | None:intergenic | 35.0% |
| TCAGACAAGCAAGCTTCATT+TGG | + | chr4_3:58617344-58617363 | None:intergenic | 40.0% | |
| ! | AAGCTTGCTTGTCTGATTTC+TGG | - | chr4_3:58617348-58617367 | Msa0651250:three_prime_UTR | 40.0% |
| TCTTGAGGATAACGTGAAAC+GGG | - | chr4_3:58617428-58617447 | Msa0651250:CDS | 40.0% | |
| ! | CTAGAGAGGTGCATAATTCA+AGG | + | chr4_3:58617733-58617752 | None:intergenic | 40.0% |
| CTTGAATTATGCACCTCTCT+AGG | - | chr4_3:58617731-58617750 | Msa0651250:CDS | 40.0% | |
| TCCCCCAATACCAAATTAGT+TGG | - | chr4_3:58617767-58617786 | Msa0651250:intron | 40.0% | |
| ! | CCCAACTAATTTGGTATTGG+GGG | + | chr4_3:58617771-58617790 | None:intergenic | 40.0% |
| CCCCCAATACCAAATTAGTT+GGG | - | chr4_3:58617768-58617787 | Msa0651250:intron | 40.0% | |
| GCCCAACTAATTTGGTATTG+GGG | + | chr4_3:58617772-58617791 | None:intergenic | 40.0% | |
| TAAGGACTGACTAATCCGAA+GGG | + | chr4_3:58617850-58617869 | None:intergenic | 40.0% | |
| TAAAACTCAGTATCCGGCTA+AGG | + | chr4_3:58617868-58617887 | None:intergenic | 40.0% | |
| CATTTGCCAAGGGAAAGTTT+GGG | + | chr4_3:58618229-58618248 | None:intergenic | 40.0% | |
| TCATTTGCCAAGGGAAAGTT+TGG | + | chr4_3:58618230-58618249 | None:intergenic | 40.0% | |
| TTCAACGAGTCATTTGCCAA+GGG | + | chr4_3:58618239-58618258 | None:intergenic | 40.0% | |
| TTTCAACGAGTCATTTGCCA+AGG | + | chr4_3:58618240-58618259 | None:intergenic | 40.0% | |
| GTAACGTGACTATGGATTTG+TGG | - | chr4_3:58618362-58618381 | Msa0651250:intron | 40.0% | |
| ! | GCTTTTGCAACAGATGTTGA+TGG | + | chr4_3:58618629-58618648 | None:intergenic | 40.0% |
| !!! | AATGGCCTTTTAGCTTGTAG+AGG | - | chr4_3:58618744-58618763 | Msa0651250:intron | 40.0% |
| TAAGGCCTCTACAAGCTAAA+AGG | + | chr4_3:58618752-58618771 | None:intergenic | 40.0% | |
| !! | ACGAACAAGACTTTAAGGCT+CGG | + | chr4_3:58618844-58618863 | None:intergenic | 40.0% |
| AAGCCACGAACAAGACTTTA+AGG | + | chr4_3:58618849-58618868 | None:intergenic | 40.0% | |
| AGATTGCAGGGACAAATACT+TGG | + | chr4_3:58618886-58618905 | None:intergenic | 40.0% | |
| GTCCCTGCAATCTATTTATG+TGG | - | chr4_3:58618893-58618912 | Msa0651250:intron | 40.0% | |
| GACCCACATAAATAGATTGC+AGG | + | chr4_3:58618899-58618918 | None:intergenic | 40.0% | |
| AACAAGGAAATTCCTGGTGA+AGG | + | chr4_3:58618997-58619016 | None:intergenic | 40.0% | |
| CTCTCAATCAATCAGCATCA+GGG | + | chr4_3:58619083-58619102 | None:intergenic | 40.0% | |
| TCTCTCAATCAATCAGCATC+AGG | + | chr4_3:58619084-58619103 | None:intergenic | 40.0% | |
| ! | TGCTGATTGATTGAGAGAGA+CGG | - | chr4_3:58619086-58619105 | Msa0651250:intron | 40.0% |
| TGTTCGCCTTACGATACATA+TGG | + | chr4_3:58619126-58619145 | None:intergenic | 40.0% | |
| CTGATGAGTTAGCAAACCTT+GGG | - | chr4_3:58619152-58619171 | Msa0651250:intron | 40.0% | |
| ATAGCTAACTAGCTAAGCGA+GGG | + | chr4_3:58619247-58619266 | None:intergenic | 40.0% | |
| AATAGCTAACTAGCTAAGCG+AGG | + | chr4_3:58619248-58619267 | None:intergenic | 40.0% | |
| TTGGAAAATCCCAGTTCAAG+AGG | - | chr4_3:58619301-58619320 | Msa0651250:intron | 40.0% | |
| TAGACAAGATCTCCATACTC+AGG | - | chr4_3:58619384-58619403 | Msa0651250:intron | 40.0% | |
| TGAACAATGTTGCTCCTCTT+TGG | + | chr4_3:58619575-58619594 | None:intergenic | 40.0% | |
| CGTGACATCCAATACATGTT+TGG | + | chr4_3:58619599-58619618 | None:intergenic | 40.0% | |
| CCCTGCAAGGAGAAAAAAAA+AGG | + | chr4_3:58619732-58619751 | None:intergenic | 40.0% | |
| CCTAAGCTTAGCTAACCATA+AGG | + | chr4_3:58620107-58620126 | None:intergenic | 40.0% | |
| ! | CCTTATGGTTAGCTAAGCTT+AGG | - | chr4_3:58620104-58620123 | Msa0651250:intron | 40.0% |
| ! | AGTCATGTATAGTTCTACGC+AGG | - | chr4_3:58620168-58620187 | Msa0651250:CDS | 40.0% |
| ! | GTCATGTATAGTTCTACGCA+GGG | - | chr4_3:58620169-58620188 | Msa0651250:CDS | 40.0% |
| ! | TCATGTATAGTTCTACGCAG+GGG | - | chr4_3:58620170-58620189 | Msa0651250:CDS | 40.0% |
| GTCAAGTTACAGGCTGATAA+AGG | - | chr4_3:58620277-58620296 | Msa0651250:CDS | 40.0% | |
| CGGGTAACACACTAGGAATT+GGG | + | chr4_3:58617235-58617254 | None:intergenic | 45.0% | |
| CCAATTCCTAGTGTGTTACC+CGG | - | chr4_3:58617233-58617252 | Msa0651250:three_prime_UTR | 45.0% | |
| TTGTTACCGGGTAACACACT+AGG | + | chr4_3:58617242-58617261 | None:intergenic | 45.0% | |
| GGTGCATAATTCAAGGTCAC+AGG | + | chr4_3:58617726-58617745 | None:intergenic | 45.0% | |
| ATGAAACCTCAGACCTAGAG+AGG | + | chr4_3:58617747-58617766 | None:intergenic | 45.0% | |
| CTAAGGACTGACTAATCCGA+AGG | + | chr4_3:58617851-58617870 | None:intergenic | 45.0% | |
| GAGGGATTGTAACGTGACTA+TGG | - | chr4_3:58618354-58618373 | Msa0651250:intron | 45.0% | |
| ATCCGATCCGAACCAACTTT+GGG | + | chr4_3:58618475-58618494 | None:intergenic | 45.0% | |
| !! | TGGCATTGGCCAATGGTATT+TGG | - | chr4_3:58618498-58618517 | Msa0651250:intron | 45.0% |
| ! | TTTACACAGCCAGCTTGCTT+TGG | - | chr4_3:58618602-58618621 | Msa0651250:intron | 45.0% |
| ! | TTACCAAGGATTCTGAGGGT+CGG | - | chr4_3:58618769-58618788 | Msa0651250:intron | 45.0% |
| ! | TCTGAGGGTCGGTTTATTTG+TGG | - | chr4_3:58618780-58618799 | Msa0651250:intron | 45.0% |
| TGTGGCTTCGTTTGTATCCT+TGG | - | chr4_3:58618798-58618817 | Msa0651250:intron | 45.0% | |
| !! | GAGCCTTAAAGTCTTGTTCG+TGG | - | chr4_3:58618843-58618862 | Msa0651250:intron | 45.0% |
| CAGGGACAAATACTTGGTTC+TGG | + | chr4_3:58618880-58618899 | None:intergenic | 45.0% | |
| GCTGATGAGTTAGCAAACCT+TGG | - | chr4_3:58619151-58619170 | Msa0651250:intron | 45.0% | |
| TGTATTGGATGTCACGATGC+AGG | - | chr4_3:58619603-58619622 | Msa0651250:intron | 45.0% | |
| GGGGTCAACTCTATTCACAA+AGG | - | chr4_3:58619749-58619768 | Msa0651250:intron | 45.0% | |
| ATCTACCGTGTCACGTACTA+TGG | - | chr4_3:58619991-58620010 | Msa0651250:intron | 45.0% | |
| CTTTGCCATAGTACGTGACA+CGG | + | chr4_3:58619999-58620018 | None:intergenic | 45.0% | |
| CTATGGCAAAGGAAGAATGC+CGG | - | chr4_3:58620008-58620027 | Msa0651250:intron | 45.0% | |
| ! | TATAGTTCTACGCAGGGGTT+TGG | - | chr4_3:58620175-58620194 | Msa0651250:CDS | 45.0% |
| GGCTGAGTTTGTCAAGTTAC+AGG | - | chr4_3:58620267-58620286 | Msa0651250:CDS | 45.0% | |
| AGTTACAGGCTGATAAAGGG+TGG | - | chr4_3:58620281-58620300 | Msa0651250:intron | 45.0% | |
| TTGCGGTCCAGAAGAGTTAT+TGG | + | chr4_3:58620458-58620477 | None:intergenic | 45.0% | |
| CCGGGTAACACACTAGGAAT+TGG | + | chr4_3:58617236-58617255 | None:intergenic | 50.0% | |
| GCGTGCGTATCTCAGATAGA+TGG | + | chr4_3:58617294-58617313 | None:intergenic | 50.0% | |
| AAGAGGTAACCAACCTGGAG+TGG | + | chr4_3:58617562-58617581 | None:intergenic | 50.0% | |
| TATGCACCTCTCTAGGTCTG+AGG | - | chr4_3:58617738-58617757 | Msa0651250:CDS | 50.0% | |
| !! | CGGATTAGTCAGTCCTTAGC+CGG | - | chr4_3:58617852-58617871 | Msa0651250:intron | 50.0% |
| TCTCATTGTGCTGCACAGAC+TGG | + | chr4_3:58618155-58618174 | None:intergenic | 50.0% | |
| GGTAAGCCCAAACTTTCCCT+TGG | - | chr4_3:58618220-58618239 | Msa0651250:intron | 50.0% | |
| !! | CTCCCAAAGTTGGTTCGGAT+CGG | - | chr4_3:58618470-58618489 | Msa0651250:intron | 50.0% |
| GATCCGATCCGAACCAACTT+TGG | + | chr4_3:58618476-58618495 | None:intergenic | 50.0% | |
| ! | GTTGATGGACCAAAGCAAGC+TGG | + | chr4_3:58618614-58618633 | None:intergenic | 50.0% |
| AGCTTGTAGAGGCCTTACCA+AGG | - | chr4_3:58618755-58618774 | Msa0651250:intron | 50.0% | |
| AGGCCTTACCAAGGATTCTG+AGG | - | chr4_3:58618764-58618783 | Msa0651250:intron | 50.0% | |
| GGCCTTACCAAGGATTCTGA+GGG | - | chr4_3:58618765-58618784 | Msa0651250:intron | 50.0% | |
| GACCCTCAGAATCCTTGGTA+AGG | + | chr4_3:58618770-58618789 | None:intergenic | 50.0% | |
| AAACCGACCCTCAGAATCCT+TGG | + | chr4_3:58618775-58618794 | None:intergenic | 50.0% | |
| ATTGGATGTCACGATGCAGG+TGG | - | chr4_3:58619606-58619625 | Msa0651250:intron | 50.0% | |
| CCAAAGGGGATGATGCTTAC+TGG | + | chr4_3:58619645-58619664 | None:intergenic | 50.0% | |
| CCAGTAAGCATCATCCCCTT+TGG | - | chr4_3:58619642-58619661 | Msa0651250:intron | 50.0% | |
| GAATAGAGTTGACCCCTGCA+AGG | + | chr4_3:58619745-58619764 | None:intergenic | 50.0% | |
| CGTGTCACGTACTATGGCAA+AGG | - | chr4_3:58619997-58620016 | Msa0651250:intron | 50.0% | |
| ! | GTAAAGAGTGCATGCCACGA+GGG | - | chr4_3:58620197-58620216 | Msa0651250:CDS | 50.0% |
| !! | GTGCACATTTGGTGCTCGTT+TGG | - | chr4_3:58620222-58620241 | Msa0651250:CDS | 50.0% |
| CAACTTGGCTCCTCCTCTTG+CGG | - | chr4_3:58617506-58617525 | Msa0651250:CDS | 55.0% | |
| TCTCCAATTTGCGCCACTCC+AGG | - | chr4_3:58617546-58617565 | Msa0651250:intron | 55.0% | |
| CAACCTGGAGTGGCGCAAAT+TGG | + | chr4_3:58617552-58617571 | None:intergenic | 55.0% | |
| CAATTTGCGCCACTCCAGGT+TGG | - | chr4_3:58617550-58617569 | Msa0651250:intron | 55.0% | |
| AATCCCACCGTCCACTTGTG+GGG | + | chr4_3:58617824-58617843 | None:intergenic | 55.0% | |
| CAATCCCACCGTCCACTTGT+GGG | + | chr4_3:58617825-58617844 | None:intergenic | 55.0% | |
| !! | GTTGGTTCGGATCGGATCAG+TGG | - | chr4_3:58618478-58618497 | Msa0651250:intron | 55.0% |
| TCGGATCGGATCAGTGGCAT+TGG | - | chr4_3:58618484-58618503 | Msa0651250:intron | 55.0% | |
| !! | GGATCAGTGGCATTGGCCAA+TGG | - | chr4_3:58618491-58618510 | Msa0651250:intron | 55.0% |
| ! | GGTAAAGAGTGCATGCCACG+AGG | - | chr4_3:58620196-58620215 | Msa0651250:CDS | 55.0% |
| AGAAAGGCAGCCGCAAGAGG+AGG | + | chr4_3:58617519-58617538 | None:intergenic | 60.0% | |
| AGCAGAAAGGCAGCCGCAAG+AGG | + | chr4_3:58617522-58617541 | None:intergenic | 60.0% | |
| TTGAATGGGCCCCCCACAAG+TGG | - | chr4_3:58617810-58617829 | Msa0651250:intron | 60.0% | |
| ATCCCACCGTCCACTTGTGG+GGG | + | chr4_3:58617823-58617842 | None:intergenic | 60.0% | |
| CCAATCCCACCGTCCACTTG+TGG | + | chr4_3:58617826-58617845 | None:intergenic | 60.0% | |
| CCACAAGTGGACGGTGGGAT+TGG | - | chr4_3:58617823-58617842 | Msa0651250:intron | 60.0% | |
| GACGGTGGGATTGGACCCTT+CGG | - | chr4_3:58617832-58617851 | Msa0651250:intron | 60.0% | |
| CCAAATGTGCACTGCCCTCG+TGG | + | chr4_3:58620214-58620233 | None:intergenic | 60.0% | |
| CCACGAGGGCAGTGCACATT+TGG | - | chr4_3:58620211-58620230 | Msa0651250:CDS | 60.0% | |
| ATGGGCCCCCCACAAGTGGA+CGG | - | chr4_3:58617814-58617833 | Msa0651250:intron | 65.0% | |
| TCCCACCGTCCACTTGTGGG+GGG | + | chr4_3:58617822-58617841 | None:intergenic | 65.0% | |
| GCCCCCCACAAGTGGACGGT+GGG | - | chr4_3:58617818-58617837 | Msa0651250:intron | 70.0% | |
| GGCCCCCCACAAGTGGACGG+TGG | - | chr4_3:58617817-58617836 | Msa0651250:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 58617209 | 58620525 | 58617209 | ID=Msa0651250;Name=Msa0651250 |
| chr4_3 | mRNA | 58617209 | 58620525 | 58617209 | ID=Msa0651250-mRNA-1;Parent=Msa0651250;Name=Msa0651250-mRNA-1;_AED=0.19;_eAED=0.19;_QI=136|1|1|1|0.8|0.66|6|195|172 |
| chr4_3 | exon | 58617209 | 58617544 | 58617209 | ID=Msa0651250-mRNA-1:exon:15572;Parent=Msa0651250-mRNA-1 |
| chr4_3 | exon | 58617705 | 58617768 | 58617705 | ID=Msa0651250-mRNA-1:exon:15571;Parent=Msa0651250-mRNA-1 |
| chr4_3 | exon | 58617953 | 58617984 | 58617953 | ID=Msa0651250-mRNA-1:exon:15570;Parent=Msa0651250-mRNA-1 |
| chr4_3 | exon | 58618090 | 58618187 | 58618090 | ID=Msa0651250-mRNA-1:exon:15569;Parent=Msa0651250-mRNA-1 |
| chr4_3 | exon | 58620167 | 58620299 | 58620167 | ID=Msa0651250-mRNA-1:exon:15568;Parent=Msa0651250-mRNA-1 |
| chr4_3 | exon | 58620339 | 58620525 | 58620339 | ID=Msa0651250-mRNA-1:exon:15567;Parent=Msa0651250-mRNA-1 |
| chr4_3 | five_prime_UTR | 58620390 | 58620525 | 58620390 | ID=Msa0651250-mRNA-1:five_prime_utr;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58620339 | 58620389 | 58620339 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58620167 | 58620299 | 58620167 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58618090 | 58618187 | 58618090 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58617953 | 58617984 | 58617953 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58617705 | 58617768 | 58617705 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | CDS | 58617404 | 58617544 | 58617404 | ID=Msa0651250-mRNA-1:cds;Parent=Msa0651250-mRNA-1 |
| chr4_3 | three_prime_UTR | 58617209 | 58617403 | 58617209 | ID=Msa0651250-mRNA-1:three_prime_utr;Parent=Msa0651250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
