AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521840 MtrunA17_Chr3g0140091 96.571 350 9 1 1 347 1 350 0.0 694
Msa0521840 MtrunA17_Chr4g0019621 94.332 247 9 1 101 347 7 248 5.23e-170 473
Msa0521840 MtrunA17_Chr4g0019621 47.500 120 58 1 89 208 125 239 8.19e-28 109
Msa0521840 MtrunA17_Chr8g0390251 65.994 347 99 4 15 347 6 347 1.16e-165 466
Msa0521840 MtrunA17_Chr6g0486631 63.881 335 108 4 23 347 17 348 1.02e-152 433
Msa0521840 MtrunA17_Chr2g0288571 66.784 283 90 1 69 347 5 287 2.30e-139 397
Msa0521840 MtrunA17_Chr4g0075021 62.319 276 100 1 76 347 7 282 5.12e-130 373
Msa0521840 MtrunA17_Chr4g0075001 60.400 250 95 1 102 347 16 265 8.52e-112 326
Msa0521840 MtrunA17_Chr4g0075001 41.085 129 72 1 86 210 130 258 1.96e-26 105
Msa0521840 MtrunA17_Chr4g0028391 30.263 152 71 6 88 210 79 224 1.92e-13 68.9
Msa0521840 MtrunA17_Chr4g0028391 28.000 150 77 5 216 338 77 222 2.16e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521840 AT1G67280.1 66.859 347 103 4 9 347 8 350 8.44e-167 469
Msa0521840 AT1G67280.2 78.927 261 55 0 87 347 2 262 1.24e-153 432
Msa0521840 AT1G11840.6 68.772 285 84 2 67 347 39 322 2.85e-140 400
Msa0521840 AT1G11840.4 69.784 278 80 1 74 347 6 283 4.44e-140 399
Msa0521840 AT1G11840.1 69.784 278 80 1 74 347 6 283 4.44e-140 399
Msa0521840 AT1G11840.3 69.784 278 80 1 74 347 6 283 4.44e-140 399
Msa0521840 AT1G11840.2 69.784 278 80 1 74 347 6 283 4.44e-140 399
Msa0521840 AT1G11840.5 68.664 217 68 0 74 290 6 222 4.40e-108 315
Msa0521840 AT1G11840.5 49.194 124 63 0 216 339 18 141 1.42e-34 127
Msa0521840 AT1G08110.3 28.767 146 77 4 88 208 30 173 5.26e-12 64.3
Msa0521840 AT1G08110.2 28.767 146 77 4 88 208 30 173 5.26e-12 64.3
Msa0521840 AT1G08110.1 28.767 146 77 4 88 208 30 173 5.26e-12 64.3
Msa0521840 AT1G08110.4 28.767 146 77 4 88 208 80 223 7.73e-12 64.7

Find 141 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATCTTCTATTATCATTT+TGG 0.140017 3_4:+74790331 None:intergenic
TGTCAAGATGTTTGCTTCTT+TGG 0.173797 3_4:-74787582 Msa0521840:three_prime_UTR
TGGTTATAGGTTTGAGCTTT+TGG 0.209102 3_4:-74789394 Msa0521840:CDS
TATGACATTGGAACTGGTTT+TGG 0.261238 3_4:-74789753 Msa0521840:CDS
AGACCCTGATGGTTGGAAAT+TGG 0.277475 3_4:-74788648 Msa0521840:intron
CAGACCAAAACTTGGTTAAC+TGG 0.278238 3_4:-74790356 Msa0521840:CDS
CAATATTAATTCAAATTTGC+AGG 0.290334 3_4:+74787823 Msa0521830:CDS
TATGGACATTTAAAATAGTA+TGG 0.291129 3_4:-74787768 Msa0521840:three_prime_UTR
TAGAAATGAACTCAGTTTGT+AGG 0.306605 3_4:-74787408 Msa0521840:three_prime_UTR
TTGAAGATCCTAGTGGTTAT+AGG 0.311803 3_4:-74789407 Msa0521840:CDS
TGTATACAAGGTTGGAGATT+TGG 0.312497 3_4:-74790301 Msa0521840:CDS
TTAAGGTATGGCCTATAAAA+TGG 0.322149 3_4:+74788076 Msa0521830:intron
ATAAAATACAATGAACTAAA+TGG 0.322295 3_4:+74787466 Msa0521830:intron
AGTAAGTTCAACTGTAAAAC+TGG 0.328366 3_4:+74789922 None:intergenic
GCATTTGAATATTTGTCTTC+CGG 0.337717 3_4:+74789971 None:intergenic
CGTAAACTGATTTAAACATT+TGG 0.346945 3_4:-74787729 Msa0521840:three_prime_UTR
GGACCCAGTTAACCAAGTTT+TGG 0.356947 3_4:+74790352 None:intergenic
CTCTTTCATCTTCTCACCAC+TGG 0.372795 3_4:-74790609 Msa0521840:CDS
CCTCCTTCATATATAGTGAT+TGG 0.373150 3_4:+74788358 None:intergenic
CGAAGCATCACTTTGCATAA+GGG 0.378451 3_4:+74789351 None:intergenic
GTGTTTGAACAGATTGCTAT+AGG 0.380967 3_4:-74788779 Msa0521840:intron
CTTCTCACCACTGGTGGTAT+TGG 0.382640 3_4:-74790600 Msa0521840:intron
TCGAAGCATCACTTTGCATA+AGG 0.390181 3_4:+74789350 None:intergenic
GCACTGGACTGTGTCTTTAG+AGG 0.393135 3_4:+74787605 Msa0521830:CDS
CGCGGCAATTCAACATGTAC+TGG 0.395036 3_4:-74788262 Msa0521840:three_prime_UTR
TGTAGCAGATGGTAACATTA+AGG 0.398859 3_4:+74790692 None:intergenic
TGCTACTTTGAAGGCACGTC+TGG 0.412837 3_4:+74787505 Msa0521830:intron
TCCCAATTACTTGGTGGAAA+AGG 0.414364 3_4:-74790432 Msa0521840:CDS
AGACAAACAGTTCTGGTTAG+AGG 0.420246 3_4:+74788235 Msa0521830:CDS
TGTTACTGTAAGCAATGTTA+AGG 0.421038 3_4:+74788059 Msa0521830:intron
GTAAAGAAGACAAACAGTTC+TGG 0.435761 3_4:+74788228 Msa0521830:CDS
GATAACTATGACATTGGAAC+TGG 0.436005 3_4:-74789759 Msa0521840:CDS
ACTGTAAAACTGGAATCTTC+AGG 0.439492 3_4:+74789932 None:intergenic
CGTGAACCTGGACCCTTACC+TGG 0.440286 3_4:-74788698 Msa0521840:CDS
CATACCAATTTCCAACCATC+AGG 0.443644 3_4:+74788644 None:intergenic
CTTCTCAAACGTACAAGAAA+AGG 0.445894 3_4:+74787635 Msa0521830:CDS
GCGAGGAGCTGCTACTTTGA+AGG 0.446885 3_4:+74787496 Msa0521830:intron
GCACGTCTGGAGAAAGGGCT+TGG 0.450167 3_4:+74787518 Msa0521830:CDS
GATAGACAACCCTGAGGAAA+AGG 0.451770 3_4:-74789155 Msa0521840:intron
ACTAACTATGACAAAGGAAA+TGG 0.452864 3_4:-74788923 Msa0521840:CDS
CAGTACACAGTAGCCAAGTT+GGG 0.453964 3_4:-74789001 Msa0521840:CDS
TTTCCCTTCCGGGCCAAGCT+GGG 0.455831 3_4:-74788130 Msa0521840:three_prime_UTR
AGAACAGGACCATTAGCTTC+AGG 0.460964 3_4:+74788971 None:intergenic
GTCTAAGCAAACAACAATCT+TGG 0.466953 3_4:+74788667 None:intergenic
ACAGTAGCCAAGTTGGGATA+TGG 0.468535 3_4:-74788995 Msa0521840:CDS
TAGGAGATCCAAGACATGTT+TGG 0.469553 3_4:-74790800 Msa0521840:five_prime_UTR
GGAGTGGATAACTATGACAT+TGG 0.474181 3_4:-74789765 Msa0521840:CDS
CTACCACAATCCCAATTACT+TGG 0.476452 3_4:-74790441 Msa0521840:CDS
CTTTACAATATCTACTGTCT+TGG 0.481456 3_4:+74789497 None:intergenic
AGCTTGGCCCGGAAGGGAAA+AGG 0.486161 3_4:+74788133 Msa0521830:CDS
GCGAAGATTATCCGTGAACC+TGG 0.488185 3_4:-74788710 Msa0521840:CDS
CCATAACAGGAGTTCTTCAC+TGG 0.490229 3_4:+74787786 Msa0521830:intron
TTGAAGGCACGTCTGGAGAA+AGG 0.490313 3_4:+74787512 Msa0521830:intron
GTTAAGAAAACGTGATATAC+CGG 0.490695 3_4:-74789990 Msa0521840:CDS
AGCAAACATCTTGACAGCAC+TGG 0.491176 3_4:+74787589 Msa0521830:CDS
TAGATATTGTAAAGGCGAAA+GGG 0.492189 3_4:-74789488 Msa0521840:CDS
TCAGTACACAGTAGCCAAGT+TGG 0.494157 3_4:-74789002 Msa0521840:intron
ATTTCTACATGTTGTATACA+AGG 0.495236 3_4:-74790313 Msa0521840:CDS
CTTGGTGTTGATACCAGGTA+AGG 0.496690 3_4:+74788685 None:intergenic
TGCCCAACCAGACCAAAACT+TGG 0.500203 3_4:-74790364 Msa0521840:CDS
CAGGTAAGGGTCCAGGTTCA+CGG 0.500509 3_4:+74788699 None:intergenic
CTACATGTTGTATACAAGGT+TGG 0.505014 3_4:-74790309 Msa0521840:CDS
CCTCCAATCACTATATATGA+AGG 0.505451 3_4:-74788361 Msa0521840:three_prime_UTR
TTCTTCACTAAACTTATAGT+AGG 0.505475 3_4:-74788433 Msa0521840:three_prime_UTR
GGATATGGTCCTGAAGCTAA+TGG 0.505691 3_4:-74788980 Msa0521840:CDS
TTGTTAATTTCAAAGGCTGT+TGG 0.505802 3_4:-74789196 Msa0521840:intron
ATTAAGTATGAGCAATGTAA+TGG 0.507216 3_4:+74787365 Msa0521830:intron
TGAAGGCACGTCTGGAGAAA+GGG 0.507302 3_4:+74787513 Msa0521830:intron
ATATCCCAGCTTGGCCCGGA+AGG 0.509324 3_4:+74788126 Msa0521830:CDS
CCTCAGGGTTGTCTATCTTG+TGG 0.510152 3_4:+74789161 None:intergenic
CCACCAAGTAATTGGGATTG+TGG 0.511397 3_4:+74790438 None:intergenic
TTCTTAACAGCTTCATGCCA+AGG 0.512814 3_4:+74790005 None:intergenic
ACACCCGACCAAACATGTCT+TGG 0.515413 3_4:+74790792 None:intergenic
CCAGTGAAGAACTCCTGTTA+TGG 0.520211 3_4:-74787786 Msa0521840:three_prime_UTR
TTGCATAAGGGTTCGCGAGT+AGG 0.520825 3_4:+74789363 None:intergenic
TTATACGTCAGTTCTAGAAC+AGG 0.522234 3_4:+74788956 None:intergenic
GATCCAAGACATGTTTGGTC+GGG 0.522515 3_4:-74790795 Msa0521840:five_prime_UTR
TTGATACCAGGTAAGGGTCC+AGG 0.528793 3_4:+74788692 None:intergenic
AGCGATATCCCAGCTTGGCC+CGG 0.529305 3_4:+74788122 Msa0521830:CDS
GACAAACAGTTCTGGTTAGA+GGG 0.532361 3_4:+74788236 Msa0521830:CDS
TTTCATCTTCTCACCACTGG+TGG 0.535528 3_4:-74790606 Msa0521840:CDS
CAAGACAGTAGATATTGTAA+AGG 0.536229 3_4:-74789496 Msa0521840:CDS
CCACAATCCCAATTACTTGG+TGG 0.538717 3_4:-74790438 Msa0521840:CDS
CCGCACTTCTCCTCAACAGT+TGG 0.540993 3_4:-74787554 Msa0521840:three_prime_UTR
TCACTATATATGAAGGAGGA+AGG 0.541579 3_4:-74788354 Msa0521840:three_prime_UTR
AGATTCTACACTGAATGCCT+TGG 0.547114 3_4:-74790022 Msa0521840:CDS
CCTTCATATATAGTGATTGG+AGG 0.550530 3_4:+74788361 None:intergenic
GGTCTTAATGTTGTAGCAGA+TGG 0.550784 3_4:+74790681 None:intergenic
TAAGTTTAGTGAAGAAGTGT+AGG 0.554352 3_4:+74788440 None:intergenic
ACAATCTTGGTGTTGATACC+AGG 0.558211 3_4:+74788680 None:intergenic
TTCAGGACCATATCCCAACT+TGG 0.559056 3_4:+74788988 None:intergenic
GTAGATATTGTAAAGGCGAA+AGG 0.560029 3_4:-74789489 Msa0521840:CDS
CTGTAAGCAATGTTAAGGTA+TGG 0.565960 3_4:+74788064 Msa0521830:intron
AGAATTGTTCAAATTAGCAA+AGG 0.569445 3_4:-74790406 Msa0521840:CDS
GGAAAGGTTACAAGAGAACC+AGG 0.573831 3_4:-74789465 Msa0521840:CDS
TAAACTTATAGTAGGCTACT+AGG 0.574564 3_4:-74788425 Msa0521840:three_prime_UTR
CACTATATATGAAGGAGGAA+GGG 0.574918 3_4:-74788353 Msa0521840:three_prime_UTR
AACTAAATGGCAGCATTGCG+AGG 0.578223 3_4:+74787479 Msa0521830:intron
TTTGCTTAGACCCTGATGGT+TGG 0.584141 3_4:-74788655 Msa0521840:CDS
AGAAGGCTATGACACGATCA+AGG 0.584516 3_4:+74789319 None:intergenic
TTCAGTATGTTACATTGGCG+CGG 0.587089 3_4:-74788280 Msa0521840:three_prime_UTR
AGAGAACCAGGGTCTGTCAA+AGG 0.592272 3_4:-74789453 Msa0521840:CDS
AGATCCAAGACATGTTTGGT+CGG 0.592886 3_4:-74790796 Msa0521840:five_prime_UTR
GTTGTTTGCTTAGACCCTGA+TGG 0.593224 3_4:-74788659 Msa0521840:CDS
ACTAACTGCAGCATTAACAT+AGG 0.596084 3_4:-74790766 Msa0521840:five_prime_UTR
TGTGCAGCGATATCCCAGCT+TGG 0.596256 3_4:+74788117 Msa0521830:CDS
CTTCATATATAGTGATTGGA+GGG 0.597313 3_4:+74788362 None:intergenic
TATCCCAGCTTGGCCCGGAA+GGG 0.598830 3_4:+74788127 Msa0521830:CDS
AGACCAAAACTTGGTTAACT+GGG 0.599796 3_4:-74790355 Msa0521840:CDS
GAGCTACCTTTGACAGACCC+TGG 0.602880 3_4:+74789447 None:intergenic
AAAATGGCAGATATAGTCAC+CGG 0.606175 3_4:+74788092 Msa0521830:CDS
CAAAGGAAATGGCTATGCAC+AGG 0.607400 3_4:-74788912 Msa0521840:intron
GGCGTCACTAACTATGACAA+AGG 0.608980 3_4:-74788929 Msa0521840:CDS
AGATATTGTAAAGGCGAAAG+GGG 0.617229 3_4:-74789487 Msa0521840:CDS
TGAACAGATTGCTATAGGCA+CGG 0.617304 3_4:-74788774 Msa0521840:intron
TGGGATATCGCTGCACACTC+CGG 0.618172 3_4:-74788111 Msa0521840:three_prime_UTR
GCAGAAGCAATCAAATCATG+TGG 0.626889 3_4:-74788734 Msa0521840:CDS
CTGGACTGTGTCTTTAGAGG+AGG 0.632407 3_4:+74787608 Msa0521830:CDS
CCAATCACTATATATGAAGG+AGG 0.636230 3_4:-74788358 Msa0521840:three_prime_UTR
CTAGAACTGACGTATAACTA+CGG 0.638025 3_4:-74788950 Msa0521840:CDS
TACTACGATTCCAACTGTTG+AGG 0.640288 3_4:+74787544 Msa0521830:CDS
TTGGTGTTGATACCAGGTAA+GGG 0.642110 3_4:+74788686 None:intergenic
GATATTGTAAAGGCGAAAGG+GGG 0.643425 3_4:-74789486 Msa0521840:CDS
TGAAGTCATTGTTACAAACA+TGG 0.646911 3_4:-74787676 Msa0521840:three_prime_UTR
AGCTCAAACCTATAACCACT+AGG 0.647923 3_4:+74789399 None:intergenic
ATACCAATTTCCAACCATCA+GGG 0.661992 3_4:+74788645 None:intergenic
CCAATGGTTGCATAGTAACG+TGG 0.664075 3_4:-74790836 None:intergenic
AGATTAATAGAATTTGAATG+CGG 0.671794 3_4:+74788203 Msa0521830:CDS
GGAAGGGAAAAGGAAGACAA+CGG 0.672432 3_4:+74788143 Msa0521830:CDS
GAACTGGAGTGACAATAGCA+TGG 0.672640 3_4:-74788475 Msa0521840:exon
TGCAAAGTGATGCTTCGAGT+AGG 0.675317 3_4:-74789345 Msa0521840:CDS
ATAACCACTAGGATCTTCAA+CGG 0.678581 3_4:+74789410 None:intergenic
GAGATTACCAATACCACCAG+TGG 0.692240 3_4:+74790593 None:intergenic
ATTCTTCGTGAAGATGACGA+TGG 0.699995 3_4:+74790636 None:intergenic
ACGTGGCACTATAATAACGT+AGG 0.702044 3_4:-74790819 Msa0521840:five_prime_UTR
CCAACTGTTGAGGAGAAGTG+CGG 0.712451 3_4:+74787554 Msa0521830:CDS
GCTTCCGTTGAAGATCCTAG+TGG 0.716192 3_4:-74789414 Msa0521840:CDS
GGTGATTGCAGATTATGGAG+TGG 0.722660 3_4:-74789781 Msa0521840:intron
GTGATGCTACAACTACAACA+AGG 0.730518 3_4:+74790660 None:intergenic
GAAAGGTTACAAGAGAACCA+GGG 0.783522 3_4:-74789464 Msa0521840:CDS
CCACAAGATAGACAACCCTG+AGG 0.800561 3_4:-74789161 Msa0521840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTATGATTTTTACA+TGG - chr3_4:74789344-74789363 Msa0521840:CDS 15.0%
!! TAACATACTGAAAAATAATA+AGG + chr3_4:74789905-74789924 None:intergenic 15.0%
!! ATAAAATACAATGAACTAAA+TGG + chr3_4:74790730-74790749 None:intergenic 15.0%
!!! GAAATCTTCTATTATCATTT+TGG + chr3_4:74787865-74787884 Msa0521830:intron 20.0%
!! TAAGCTATTTATACTAATAG+AGG + chr3_4:74787967-74787986 Msa0521830:CDS 20.0%
!!! AAATATTCAAATGCTTTTCT+TGG - chr3_4:74788231-74788250 Msa0521840:three_prime_UTR 20.0%
!!! TAATGCTACTTTTTTTTTTC+CGG - chr3_4:74788312-74788331 Msa0521840:three_prime_UTR 20.0%
!! TTCAATGTTCATCATAATAA+GGG + chr3_4:74788585-74788604 None:intergenic 20.0%
!! ATTCAATGTTCATCATAATA+AGG + chr3_4:74788586-74788605 None:intergenic 20.0%
!! AGTTAATGTAATTGTTATGA+TGG - chr3_4:74788917-74788936 Msa0521840:CDS 20.0%
!! AACATATTACATCAAATACA+AGG + chr3_4:74789585-74789604 None:intergenic 20.0%
!!! GATTTTTCTGAAAAAATTGT+TGG + chr3_4:74789794-74789813 None:intergenic 20.0%
!!! TATTTTTCAGTATGTTACAT+TGG - chr3_4:74789908-74789927 Msa0521840:intron 20.0%
!! AGATTAATAGAATTTGAATG+CGG + chr3_4:74789993-74790012 None:intergenic 20.0%
!!! AAGTTTTGTATACTGAAATT+TGG - chr3_4:74790170-74790189 Msa0521840:intron 20.0%
!! CAATATTAATTCAAATTTGC+AGG + chr3_4:74790373-74790392 None:intergenic 20.0%
!!! TATGGACATTTAAAATAGTA+TGG - chr3_4:74790425-74790444 Msa0521840:CDS 20.0%
! AGAATTGTTCAAATTAGCAA+AGG - chr3_4:74787787-74787806 Msa0521840:three_prime_UTR 25.0%
! ATTTCTACATGTTGTATACA+AGG - chr3_4:74787880-74787899 Msa0521840:intron 25.0%
!! AGTATGTTCTACTTCAATTT+TGG - chr3_4:74787927-74787946 Msa0521840:intron 25.0%
!! ATGCATAATAATGATTTTGC+CGG + chr3_4:74788334-74788353 None:intergenic 25.0%
! TATGATGAACATTGAATGAA+AGG - chr3_4:74788589-74788608 Msa0521840:intron 25.0%
!! CTAGACAATTAAGACTATTT+TGG - chr3_4:74788648-74788667 Msa0521840:intron 25.0%
!! TCTTTTTCTATTTTCAGAAG+AGG - chr3_4:74789314-74789333 Msa0521840:CDS 25.0%
!! CTTTTTCTATTTTCAGAAGA+GGG - chr3_4:74789315-74789334 Msa0521840:CDS 25.0%
! ACTTATTTATTACTTCTTGC+AGG - chr3_4:74789666-74789685 Msa0521840:intron 25.0%
!!! TGATAATGTTGATTTTCTGA+AGG - chr3_4:74789696-74789715 Msa0521840:intron 25.0%
! TTCTTCACTAAACTTATAGT+AGG - chr3_4:74789760-74789779 Msa0521840:CDS 25.0%
!!! AATATGCTTGCTTTTCATTT+TGG - chr3_4:74790226-74790245 Msa0521840:intron 25.0%
!!! TGTGATTTGTTAATGAATGT+AGG - chr3_4:74790329-74790348 Msa0521840:CDS 25.0%
!!! CTATTTTAAATGTCCATAAC+AGG + chr3_4:74790423-74790442 None:intergenic 25.0%
!! CGTAAACTGATTTAAACATT+TGG - chr3_4:74790464-74790483 Msa0521840:intron 25.0%
!! AAATGAAAGCTTTGAGAATG+AGG + chr3_4:74787642-74787661 Msa0521830:intron 30.0%
TAAACACTTGTGAGTTTGAT+TGG + chr3_4:74788100-74788119 Msa0521830:CDS 30.0%
GTTAAGAAAACGTGATATAC+CGG - chr3_4:74788203-74788222 Msa0521840:three_prime_UTR 30.0%
GCATTTGAATATTTGTCTTC+CGG + chr3_4:74788225-74788244 Msa0521830:CDS 30.0%
! TCAAATGCTTTTCTTGGATA+CGG - chr3_4:74788237-74788256 Msa0521840:three_prime_UTR 30.0%
AGTAAGTTCAACTGTAAAAC+TGG + chr3_4:74788274-74788293 Msa0521830:CDS 30.0%
CTTTACAATATCTACTGTCT+TGG + chr3_4:74788699-74788718 None:intergenic 30.0%
CAAGACAGTAGATATTGTAA+AGG - chr3_4:74788697-74788716 Msa0521840:CDS 30.0%
TAGATATTGTAAAGGCGAAA+GGG - chr3_4:74788705-74788724 Msa0521840:CDS 30.0%
!!! TACACTCACTTTTTCATAGA+AGG + chr3_4:74788894-74788913 None:intergenic 30.0%
CTTGTCGTTGTTAATTTCAA+AGG - chr3_4:74788990-74789009 Msa0521840:CDS 30.0%
TTGTTAATTTCAAAGGCTGT+TGG - chr3_4:74788997-74789016 Msa0521840:CDS 30.0%
TCAATCAAAATAGTAATCCC+AGG + chr3_4:74789110-74789129 None:intergenic 30.0%
ACTAACTATGACAAAGGAAA+TGG - chr3_4:74789270-74789289 Msa0521840:intron 30.0%
! TAAGTTTAGTGAAGAAGTGT+AGG + chr3_4:74789756-74789775 None:intergenic 30.0%
TAAACTTATAGTAGGCTACT+AGG - chr3_4:74789768-74789787 Msa0521840:CDS 30.0%
CTTCATATATAGTGATTGGA+GGG + chr3_4:74789834-74789853 None:intergenic 30.0%
!!! GACTATATCTGCCATTTTAT+AGG - chr3_4:74790106-74790125 Msa0521840:intron 30.0%
TTAAGGTATGGCCTATAAAA+TGG + chr3_4:74790120-74790139 None:intergenic 30.0%
TGTTACTGTAAGCAATGTTA+AGG + chr3_4:74790137-74790156 None:intergenic 30.0%
TGAAGTCATTGTTACAAACA+TGG - chr3_4:74790517-74790536 Msa0521840:intron 30.0%
TAGAAATGAACTCAGTTTGT+AGG - chr3_4:74790785-74790804 Msa0521840:five_prime_UTR 30.0%
ACTAACTGCAGCATTAACAT+AGG - chr3_4:74787427-74787446 Msa0521840:three_prime_UTR 35.0%
TGTAGCAGATGGTAACATTA+AGG + chr3_4:74787504-74787523 Msa0521830:intron 35.0%
GCTGCATTTGGTTATTCATT+TGG - chr3_4:74787720-74787739 Msa0521840:three_prime_UTR 35.0%
! TCCTTTTCCACCAAGTAATT+GGG + chr3_4:74787765-74787784 Msa0521830:intron 35.0%
! ATCCTTTTCCACCAAGTAAT+TGG + chr3_4:74787766-74787785 Msa0521830:intron 35.0%
AGACCAAAACTTGGTTAACT+GGG - chr3_4:74787838-74787857 Msa0521840:three_prime_UTR 35.0%
CTACATGTTGTATACAAGGT+TGG - chr3_4:74787884-74787903 Msa0521840:intron 35.0%
TGTATACAAGGTTGGAGATT+TGG - chr3_4:74787892-74787911 Msa0521840:intron 35.0%
AGTTTGATTGGAAGAGCTTA+TGG + chr3_4:74788088-74788107 Msa0521830:CDS 35.0%
CTCACAAGTGTTTATGTAAG+TGG - chr3_4:74788106-74788125 Msa0521840:three_prime_UTR 35.0%
! CAAATGCTTTTCTTGGATAC+GGG - chr3_4:74788238-74788257 Msa0521840:three_prime_UTR 35.0%
ACTGTAAAACTGGAATCTTC+AGG + chr3_4:74788264-74788283 Msa0521830:CDS 35.0%
CGAAATAGCAACTATGATGA+GGG + chr3_4:74788391-74788410 None:intergenic 35.0%
!! TCATCATAGTTGCTATTTCG+CGG - chr3_4:74788391-74788410 Msa0521840:three_prime_UTR 35.0%
GATAACTATGACATTGGAAC+TGG - chr3_4:74788434-74788453 Msa0521840:three_prime_UTR 35.0%
!! TATGACATTGGAACTGGTTT+TGG - chr3_4:74788440-74788459 Msa0521840:three_prime_UTR 35.0%
GTAGATATTGTAAAGGCGAA+AGG - chr3_4:74788704-74788723 Msa0521840:CDS 35.0%
AGATATTGTAAAGGCGAAAG+GGG - chr3_4:74788706-74788725 Msa0521840:CDS 35.0%
ATAACCACTAGGATCTTCAA+CGG + chr3_4:74788786-74788805 None:intergenic 35.0%
TTGAAGATCCTAGTGGTTAT+AGG - chr3_4:74788786-74788805 Msa0521840:intron 35.0%
! TGGTTATAGGTTTGAGCTTT+TGG - chr3_4:74788799-74788818 Msa0521840:intron 35.0%
! TAGTTGTTACCTTTTCCTCA+GGG + chr3_4:74789050-74789069 None:intergenic 35.0%
GAAAAGGTAACAACTACTTG+TGG - chr3_4:74789054-74789073 Msa0521840:intron 35.0%
GTGGTTATTAATCAGATGCA+TGG - chr3_4:74789073-74789092 Msa0521840:intron 35.0%
AAATAGTAATCCCAGGAACA+CGG + chr3_4:74789103-74789122 None:intergenic 35.0%
!! TTATACGTCAGTTCTAGAAC+AGG + chr3_4:74789240-74789259 None:intergenic 35.0%
CTAGAACTGACGTATAACTA+CGG - chr3_4:74789243-74789262 Msa0521840:intron 35.0%
CATGCATTATACATTCATGG+AGG + chr3_4:74789371-74789390 None:intergenic 35.0%
CGACATGCATTATACATTCA+TGG + chr3_4:74789374-74789393 None:intergenic 35.0%
GTGTTTGAACAGATTGCTAT+AGG - chr3_4:74789414-74789433 Msa0521840:CDS 35.0%
GTCTAAGCAAACAACAATCT+TGG + chr3_4:74789529-74789548 None:intergenic 35.0%
ATACCAATTTCCAACCATCA+GGG + chr3_4:74789551-74789570 None:intergenic 35.0%
!!! TGTTGATTTTCTGAAGGAAC+TGG - chr3_4:74789702-74789721 Msa0521840:intron 35.0%
CCTTCATATATAGTGATTGG+AGG + chr3_4:74789835-74789854 None:intergenic 35.0%
CCTCCAATCACTATATATGA+AGG - chr3_4:74789832-74789851 Msa0521840:intron 35.0%
CCTCCTTCATATATAGTGAT+TGG + chr3_4:74789838-74789857 None:intergenic 35.0%
CCAATCACTATATATGAAGG+AGG - chr3_4:74789835-74789854 Msa0521840:intron 35.0%
TCACTATATATGAAGGAGGA+AGG - chr3_4:74789839-74789858 Msa0521840:intron 35.0%
CACTATATATGAAGGAGGAA+GGG - chr3_4:74789840-74789859 Msa0521840:intron 35.0%
GTAAAGAAGACAAACAGTTC+TGG + chr3_4:74789968-74789987 None:intergenic 35.0%
!! GGCAAAAAGAGAGCATATTT+TGG + chr3_4:74790032-74790051 None:intergenic 35.0%
AAAATGGCAGATATAGTCAC+CGG + chr3_4:74790104-74790123 None:intergenic 35.0%
CTGTAAGCAATGTTAAGGTA+TGG + chr3_4:74790132-74790151 None:intergenic 35.0%
ATGAAAAGCAAGCATATTGC+AGG + chr3_4:74790224-74790243 None:intergenic 35.0%
CTATTCAACACAATGACTAC+AGG + chr3_4:74790258-74790277 None:intergenic 35.0%
ACAAATCACACACGAGTTAT+TGG + chr3_4:74790319-74790338 None:intergenic 35.0%
CTTCTCAAACGTACAAGAAA+AGG + chr3_4:74790561-74790580 None:intergenic 35.0%
TGTCAAGATGTTTGCTTCTT+TGG - chr3_4:74790611-74790630 Msa0521840:CDS 35.0%
ACGTGGCACTATAATAACGT+AGG - chr3_4:74787374-74787393 Msa0521840:three_prime_UTR 40.0%
TAGGAGATCCAAGACATGTT+TGG - chr3_4:74787393-74787412 Msa0521840:three_prime_UTR 40.0%
AGATCCAAGACATGTTTGGT+CGG - chr3_4:74787397-74787416 Msa0521840:three_prime_UTR 40.0%
GGTCTTAATGTTGTAGCAGA+TGG + chr3_4:74787515-74787534 Msa0521830:intron 40.0%
GTGATGCTACAACTACAACA+AGG + chr3_4:74787536-74787555 Msa0521830:CDS 40.0%
ATTCTTCGTGAAGATGACGA+TGG + chr3_4:74787560-74787579 Msa0521830:CDS 40.0%
!! TGAAAGCTTTGAGAATGAGG+TGG + chr3_4:74787639-74787658 Msa0521830:intron 40.0%
CTACCACAATCCCAATTACT+TGG - chr3_4:74787752-74787771 Msa0521840:three_prime_UTR 40.0%
! TCCCAATTACTTGGTGGAAA+AGG - chr3_4:74787761-74787780 Msa0521840:three_prime_UTR 40.0%
!! AACCAAGTTTTGGTCTGGTT+GGG + chr3_4:74787834-74787853 Msa0521830:intron 40.0%
!! TAACCAAGTTTTGGTCTGGT+TGG + chr3_4:74787835-74787854 Msa0521830:intron 40.0%
!! CAGTTAACCAAGTTTTGGTC+TGG + chr3_4:74787839-74787858 Msa0521830:intron 40.0%
CAGACCAAAACTTGGTTAAC+TGG - chr3_4:74787837-74787856 Msa0521840:three_prime_UTR 40.0%
AGATTCTACACTGAATGCCT+TGG - chr3_4:74788171-74788190 Msa0521840:three_prime_UTR 40.0%
TTCTTAACAGCTTCATGCCA+AGG + chr3_4:74788191-74788210 Msa0521830:CDS 40.0%
! GAGGGAGAATTTTGTGTAAG+TGG + chr3_4:74788373-74788392 None:intergenic 40.0%
GCGAAATAGCAACTATGATG+AGG + chr3_4:74788392-74788411 None:intergenic 40.0%
GGAGTGGATAACTATGACAT+TGG - chr3_4:74788428-74788447 Msa0521840:three_prime_UTR 40.0%
!!! GGAACTGGTTTTGGTCATTT+TGG - chr3_4:74788449-74788468 Msa0521840:three_prime_UTR 40.0%
! GTTTTATACTGCGCTTTTGC+AGG - chr3_4:74788670-74788689 Msa0521840:CDS 40.0%
GATATTGTAAAGGCGAAAGG+GGG - chr3_4:74788707-74788726 Msa0521840:CDS 40.0%
GAAAGGTTACAAGAGAACCA+GGG - chr3_4:74788729-74788748 Msa0521840:CDS 40.0%
AGCTCAAACCTATAACCACT+AGG + chr3_4:74788797-74788816 None:intergenic 40.0%
! CGAAGCATCACTTTGCATAA+GGG + chr3_4:74788845-74788864 None:intergenic 40.0%
! TCGAAGCATCACTTTGCATA+AGG + chr3_4:74788846-74788865 None:intergenic 40.0%
TAGATGCAAACACATGCAAG+AGG - chr3_4:74788955-74788974 Msa0521840:CDS 40.0%
! GTAGTTGTTACCTTTTCCTC+AGG + chr3_4:74789051-74789070 None:intergenic 40.0%
TGAACAGATTGCTATAGGCA+CGG - chr3_4:74789419-74789438 Msa0521840:CDS 40.0%
GCAGAAGCAATCAAATCATG+TGG - chr3_4:74789459-74789478 Msa0521840:CDS 40.0%
!! TTGGTGTTGATACCAGGTAA+GGG + chr3_4:74789510-74789529 None:intergenic 40.0%
!! ACAATCTTGGTGTTGATACC+AGG + chr3_4:74789516-74789535 None:intergenic 40.0%
CATACCAATTTCCAACCATC+AGG + chr3_4:74789552-74789571 None:intergenic 40.0%
CTGATGGTTGGAAATTGGTA+TGG - chr3_4:74789550-74789569 Msa0521840:intron 40.0%
AAACAATGAGCGACATACAG+AGG + chr3_4:74789633-74789652 None:intergenic 40.0%
TTCAGTATGTTACATTGGCG+CGG - chr3_4:74789913-74789932 Msa0521840:intron 40.0%
! GACAAACAGTTCTGGTTAGA+GGG + chr3_4:74789960-74789979 None:intergenic 40.0%
! AGACAAACAGTTCTGGTTAG+AGG + chr3_4:74789961-74789980 None:intergenic 40.0%
TACTACGATTCCAACTGTTG+AGG + chr3_4:74790652-74790671 None:intergenic 40.0%
GATCCAAGACATGTTTGGTC+GGG - chr3_4:74787398-74787417 Msa0521840:three_prime_UTR 45.0%
CTCTTTCATCTTCTCACCAC+TGG - chr3_4:74787584-74787603 Msa0521840:three_prime_UTR 45.0%
TTTCATCTTCTCACCACTGG+TGG - chr3_4:74787587-74787606 Msa0521840:three_prime_UTR 45.0%
GAGATTACCAATACCACCAG+TGG + chr3_4:74787603-74787622 Msa0521830:CDS 45.0%
CCACCAAGTAATTGGGATTG+TGG + chr3_4:74787758-74787777 Msa0521830:intron 45.0%
CCACAATCCCAATTACTTGG+TGG - chr3_4:74787755-74787774 Msa0521840:three_prime_UTR 45.0%
! GGACCCAGTTAACCAAGTTT+TGG + chr3_4:74787844-74787863 Msa0521830:intron 45.0%
TTCGCGGTGATTGCAGATTA+TGG - chr3_4:74788407-74788426 Msa0521840:three_prime_UTR 45.0%
GGTGATTGCAGATTATGGAG+TGG - chr3_4:74788412-74788431 Msa0521840:three_prime_UTR 45.0%
GGAAAGGTTACAAGAGAACC+AGG - chr3_4:74788728-74788747 Msa0521840:CDS 45.0%
TGCAAAGTGATGCTTCGAGT+AGG - chr3_4:74788848-74788867 Msa0521840:intron 45.0%
AGAAGGCTATGACACGATCA+AGG + chr3_4:74788877-74788896 None:intergenic 45.0%
GATAGACAACCCTGAGGAAA+AGG - chr3_4:74789038-74789057 Msa0521840:intron 45.0%
TCAGTACACAGTAGCCAAGT+TGG - chr3_4:74789191-74789210 Msa0521840:intron 45.0%
CAGTACACAGTAGCCAAGTT+GGG - chr3_4:74789192-74789211 Msa0521840:intron 45.0%
! ACAGTAGCCAAGTTGGGATA+TGG - chr3_4:74789198-74789217 Msa0521840:intron 45.0%
TTCAGGACCATATCCCAACT+TGG + chr3_4:74789208-74789227 None:intergenic 45.0%
GGATATGGTCCTGAAGCTAA+TGG - chr3_4:74789213-74789232 Msa0521840:intron 45.0%
! AGAACAGGACCATTAGCTTC+AGG + chr3_4:74789225-74789244 None:intergenic 45.0%
GGCGTCACTAACTATGACAA+AGG - chr3_4:74789264-74789283 Msa0521840:intron 45.0%
CAAAGGAAATGGCTATGCAC+AGG - chr3_4:74789281-74789300 Msa0521840:intron 45.0%
!! CTTGGTGTTGATACCAGGTA+AGG + chr3_4:74789511-74789530 None:intergenic 45.0%
GTTGTTTGCTTAGACCCTGA+TGG - chr3_4:74789534-74789553 Msa0521840:intron 45.0%
TTTGCTTAGACCCTGATGGT+TGG - chr3_4:74789538-74789557 Msa0521840:intron 45.0%
AGACCCTGATGGTTGGAAAT+TGG - chr3_4:74789545-74789564 Msa0521840:intron 45.0%
CATACAGAGGTTGACACAGT+AGG + chr3_4:74789620-74789639 None:intergenic 45.0%
GAACTGGAGTGACAATAGCA+TGG - chr3_4:74789718-74789737 Msa0521840:intron 45.0%
GGAAGGGAAAAGGAAGACAA+CGG + chr3_4:74790053-74790072 None:intergenic 45.0%
! GTTGTCTTCCTTTTCCCTTC+CGG - chr3_4:74790052-74790071 Msa0521840:intron 45.0%
! TTGTCTTCCTTTTCCCTTCC+GGG - chr3_4:74790053-74790072 Msa0521840:intron 45.0%
CCATAACAGGAGTTCTTCAC+TGG + chr3_4:74790410-74790429 None:intergenic 45.0%
CCAGTGAAGAACTCCTGTTA+TGG - chr3_4:74790407-74790426 Msa0521840:CDS 45.0%
AGCAAACATCTTGACAGCAC+TGG + chr3_4:74790607-74790626 None:intergenic 45.0%
AACTAAATGGCAGCATTGCG+AGG + chr3_4:74790717-74790736 None:intergenic 45.0%
ACACCCGACCAAACATGTCT+TGG + chr3_4:74787404-74787423 Msa0521830:intron 50.0%
CTTCTCACCACTGGTGGTAT+TGG - chr3_4:74787593-74787612 Msa0521840:three_prime_UTR 50.0%
TCTTCTGCTGCTGCTGCATT+TGG - chr3_4:74787708-74787727 Msa0521840:three_prime_UTR 50.0%
TGCCCAACCAGACCAAAACT+TGG - chr3_4:74787829-74787848 Msa0521840:three_prime_UTR 50.0%
TGTAAAGGCGAAAGGGGGAA+AGG - chr3_4:74788712-74788731 Msa0521840:CDS 50.0%
AGAGAACCAGGGTCTGTCAA+AGG - chr3_4:74788740-74788759 Msa0521840:CDS 50.0%
GCTTCCGTTGAAGATCCTAG+TGG - chr3_4:74788779-74788798 Msa0521840:intron 50.0%
TTGCATAAGGGTTCGCGAGT+AGG + chr3_4:74788833-74788852 None:intergenic 50.0%
CCTCAGGGTTGTCTATCTTG+TGG + chr3_4:74789035-74789054 None:intergenic 50.0%
CCACAAGATAGACAACCCTG+AGG - chr3_4:74789032-74789051 Msa0521840:intron 50.0%
GCGAAGATTATCCGTGAACC+TGG - chr3_4:74789483-74789502 Msa0521840:CDS 50.0%
TTGATACCAGGTAAGGGTCC+AGG + chr3_4:74789504-74789523 None:intergenic 50.0%
CGCGGCAATTCAACATGTAC+TGG - chr3_4:74789931-74789950 Msa0521840:CDS 50.0%
! CTGGACTGTGTCTTTAGAGG+AGG + chr3_4:74790588-74790607 None:intergenic 50.0%
GCACTGGACTGTGTCTTTAG+AGG + chr3_4:74790591-74790610 None:intergenic 50.0%
CCAACTGTTGAGGAGAAGTG+CGG + chr3_4:74790642-74790661 None:intergenic 50.0%
! TGAAGGCACGTCTGGAGAAA+GGG + chr3_4:74790683-74790702 None:intergenic 50.0%
! TTGAAGGCACGTCTGGAGAA+AGG + chr3_4:74790684-74790703 None:intergenic 50.0%
!! TGCTACTTTGAAGGCACGTC+TGG + chr3_4:74790691-74790710 None:intergenic 50.0%
GAGCTACCTTTGACAGACCC+TGG + chr3_4:74788749-74788768 None:intergenic 55.0%
TGCATGGCTATCCGTGTTCC+TGG - chr3_4:74789089-74789108 Msa0521840:intron 55.0%
GCATGGCTATCCGTGTTCCT+GGG - chr3_4:74789090-74789109 Msa0521840:intron 55.0%
CAGGTAAGGGTCCAGGTTCA+CGG + chr3_4:74789497-74789516 None:intergenic 55.0%
TGTGCAGCGATATCCCAGCT+TGG + chr3_4:74790079-74790098 None:intergenic 55.0%
TGGGATATCGCTGCACACTC+CGG - chr3_4:74790082-74790101 Msa0521840:intron 55.0%
CCGCACTTCTCCTCAACAGT+TGG - chr3_4:74790639-74790658 Msa0521840:CDS 55.0%
!! GCGAGGAGCTGCTACTTTGA+AGG + chr3_4:74790700-74790719 None:intergenic 55.0%
CGTGAACCTGGACCCTTACC+TGG - chr3_4:74789495-74789514 Msa0521840:CDS 60.0%
AGCTTGGCCCGGAAGGGAAA+AGG + chr3_4:74790063-74790082 None:intergenic 60.0%
! TTTTCCCTTCCGGGCCAAGC+TGG - chr3_4:74790062-74790081 Msa0521840:intron 60.0%
TTTCCCTTCCGGGCCAAGCT+GGG - chr3_4:74790063-74790082 Msa0521840:intron 60.0%
TATCCCAGCTTGGCCCGGAA+GGG + chr3_4:74790069-74790088 None:intergenic 60.0%
ATATCCCAGCTTGGCCCGGA+AGG + chr3_4:74790070-74790089 None:intergenic 60.0%
AGCGATATCCCAGCTTGGCC+CGG + chr3_4:74790074-74790093 None:intergenic 60.0%
GCACGTCTGGAGAAAGGGCT+TGG + chr3_4:74790678-74790697 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 74787370 74790845 74787370 ID=Msa0521840;Name=Msa0521840
chr3_4 mRNA 74787370 74790845 74787370 ID=Msa0521840-mRNA-1;Parent=Msa0521840;Name=Msa0521840-mRNA-1;_AED=0.24;_eAED=0.24;_QI=121|1|1|1|0.88|0.8|10|933|347
chr3_4 exon 74787370 74787864 74787370 ID=Msa0521840-mRNA-1:exon:21310;Parent=Msa0521840-mRNA-1
chr3_4 exon 74788048 74788527 74788048 ID=Msa0521840-mRNA-1:exon:21309;Parent=Msa0521840-mRNA-1
chr3_4 exon 74788649 74788789 74788649 ID=Msa0521840-mRNA-1:exon:21308;Parent=Msa0521840-mRNA-1
chr3_4 exon 74788913 74789020 74788913 ID=Msa0521840-mRNA-1:exon:21307;Parent=Msa0521840-mRNA-1
chr3_4 exon 74789156 74789203 74789156 ID=Msa0521840-mRNA-1:exon:21306;Parent=Msa0521840-mRNA-1
chr3_4 exon 74789311 74789523 74789311 ID=Msa0521840-mRNA-1:exon:21305;Parent=Msa0521840-mRNA-1
chr3_4 exon 74789728 74789792 74789728 ID=Msa0521840-mRNA-1:exon:21304;Parent=Msa0521840-mRNA-1
chr3_4 exon 74789918 74790042 74789918 ID=Msa0521840-mRNA-1:exon:21303;Parent=Msa0521840-mRNA-1
chr3_4 exon 74790288 74790465 74790288 ID=Msa0521840-mRNA-1:exon:21302;Parent=Msa0521840-mRNA-1
chr3_4 exon 74790601 74790845 74790601 ID=Msa0521840-mRNA-1:exon:21301;Parent=Msa0521840-mRNA-1
chr3_4 five_prime_UTR 74790725 74790845 74790725 ID=Msa0521840-mRNA-1:five_prime_utr;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74790601 74790724 74790601 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74790288 74790465 74790288 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74789918 74790042 74789918 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74789728 74789792 74789728 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74789311 74789523 74789311 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74789156 74789203 74789156 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74788913 74789020 74788913 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74788649 74788789 74788649 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 CDS 74788486 74788527 74788486 ID=Msa0521840-mRNA-1:cds;Parent=Msa0521840-mRNA-1
chr3_4 three_prime_UTR 74788048 74788485 74788048 ID=Msa0521840-mRNA-1:three_prime_utr;Parent=Msa0521840-mRNA-1
chr3_4 three_prime_UTR 74787370 74787864 74787370 ID=Msa0521840-mRNA-1:three_prime_utr;Parent=Msa0521840-mRNA-1
Gene Sequence

>Msa0521840

ATGATCTCATCCTTAATGTTACCATCTGCTACAACATTAAGACCTTGTTGTAGTTGTAGCATCACTCCATCGTCATCTTCACGAAGAATTGCTCTCTTTCATCTTCTCACCACTGGTGGTATTGCTCTACCACAATCCCAATTACTTGGTGGAAAAGGATCAGAATTGTTCAAATTAGCAAAGGCTAATGCTGCAGTAAATCTTGCCCAACCAGACCAAAACTTGGTTAACTGGGTCCAAAATGATAATAGAAGATTTCTACATGTTGTATACAAGGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTAAGAAAACGTGATATACCGGAAGACAAATATTCAAATGCTTTTCTTGGATACGGGCCTGAAGATTCCAGTTTTACAGTTGAACTTACTTATAATTATGGAGTGGATAACTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTATAGCTGAAGATGTTTCCAAGACAGTAGATATTGTAAAGGCGAAAGGGGGAAAGGTTACAAGAGAACCAGGGTCTGTCAAAGGTAGCTCTATAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAAAAGACCTACTCGCGAACCCTTATGCAAAGTGATGCTTCGAGTAGGCGACCTTGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCCACAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCAAGTTGGGATATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGACGTATAACTACGGCGTCACTAACTATGACAAAGGAAATGGCTATGCACAGATTGCTATAGGCACGGATGATGTCTATAAAACTGCAGAAGCAATCAAATCATGTGGAGCGAAGATTATCCGTGAACCTGGACCCTTACCTGGTATCAACACCAAGATTGTTGTTTGCTTAGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAACTGGAGTGA

Protein sequence

>Msa0521840

MISSLMLPSATTLRPCCSCSITPSSSSRRIALFHLLTTGGIALPQSQLLGGKGSELFKLAKANAAVNLAQPDQNLVNWVQNDNRRFLHVVYKVGDLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGVDNYDIGTGFGHFGIIAEDVSKTVDIVKAKGGKVTREPGSVKGSSIVTASVEDPSGYRFELLEKRPTREPLCKVMLRVGDLDRVIAFYEKAVGMKLLHKIDNPEEKYTVAKLGYGPEANGPVLELTYNYGVTNYDKGNGYAQIAIGTDDVYKTAEAIKSCGAKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE*