AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0762860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762860 MtrunA17_Chr5g0413181 98.649 148 2 0 121 268 1 148 4.13e-105 301
Msa0762860 MtrunA17_Chr5g0413191 98.000 100 2 0 11 110 7 106 4.13e-70 213
Msa0762860 MtrunA17_Chr4g0003041 30.290 241 139 7 53 268 49 285 6.09e-22 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762860 AT1G23360.1 67.511 237 69 2 38 266 23 259 1.23e-113 327
Msa0762860 AT1G23360.2 64.557 158 54 1 111 266 1 158 8.82e-70 213
Msa0762860 AT1G23360.3 64.557 158 54 1 111 266 1 158 8.82e-70 213
Msa0762860 AT5G57300.3 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0762860 AT5G57300.1 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0762860 AT5G57300.4 27.731 238 142 4 53 263 48 282 1.80e-21 91.7
Msa0762860 AT5G57300.2 27.731 238 142 4 53 263 48 282 1.80e-21 91.7

Find 113 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATGTACACTTCAATTA+TGG 0.127610 5_2:+21430257 Msa0762870:intron
GTCCCTGTAGCCTCTGTTTA+TGG 0.157587 5_2:-21430937 Msa0762860:CDS
TTGTTGTGCATCTCTATATT+TGG 0.223777 5_2:-21429844 Msa0762860:three_prime_UTR
CTCTGCTTTCCATGGTTACC+TGG 0.228113 5_2:-21430127 Msa0762860:three_prime_UTR
AACAAGATGCTCTTCATTCT+TGG 0.256604 5_2:-21429980 Msa0762860:three_prime_UTR
GCTACTAACTTCTTCATTTA+CGG 0.259722 5_2:-21431150 Msa0762860:intron
CTGCCGTGCCGCAAGTAAAT+TGG 0.292364 5_2:+21430176 Msa0762870:intron
CAGGGGAGGTAGGAATTTAT+TGG 0.302595 5_2:+21430556 Msa0762870:intron
GCTTGGGTCAGCACCGGATT+TGG 0.335534 5_2:-21432743 Msa0762860:CDS
CCATAATTGAAGTGTACATT+TGG 0.335813 5_2:-21430257 Msa0762860:three_prime_UTR
CTAAACATTAGATGACATTT+AGG 0.336469 5_2:-21430594 Msa0762860:exon
GGAAGCGAATGGCTGTTTCT+TGG 0.344170 5_2:-21432722 Msa0762860:CDS
TATATTTATACAGCCTGAAC+AGG 0.347158 5_2:+21430537 Msa0762870:intron
CAAATGTACACTTCAATTAT+GGG 0.351495 5_2:+21430258 Msa0762870:intron
GCTGAATGATTTGCTGAGCT+TGG 0.375216 5_2:-21432760 Msa0762860:CDS
TTCAGACAGTTTAGTTATAG+TGG 0.384924 5_2:+21429680 Msa0762850:CDS
ATCTAAGAAAGGTGGATTAG+AGG 0.385634 5_2:-21430007 Msa0762860:three_prime_UTR
AATTCCTACCTCCCCTGTTC+AGG 0.389107 5_2:-21430550 Msa0762860:three_prime_UTR
GAGAAACTTGCTTTAGAAGT+AGG 0.398667 5_2:-21430673 Msa0762860:CDS
AGTAATGTACTCTATATTCC+TGG 0.401752 5_2:+21429520 Msa0762850:intron
TAATTCTATTTGCAGTTTCA+AGG 0.402300 5_2:-21430444 Msa0762860:three_prime_UTR
CAGCCATTCGCTTCCAAATC+CGG 0.402703 5_2:+21432730 Msa0762870:CDS
TGGAGGCCTCATGGGGTGCT+TGG 0.422234 5_2:-21430620 Msa0762860:CDS
CTGTGATGCAGGGAAGGAAT+TGG 0.426333 5_2:-21430695 Msa0762860:intron
CTCTATATTCCTGGATCTGA+AGG 0.428924 5_2:+21429529 Msa0762850:intron
TTGGTTTGATGCAATCACTA+TGG 0.429752 5_2:-21431362 Msa0762860:CDS
TTACTGCTAGAGATAGTTAC+TGG 0.433935 5_2:+21429624 Msa0762850:CDS
TTTCTCAAAGGAGCAACTAA+TGG 0.435316 5_2:-21431700 Msa0762860:CDS
GTCGCAATGAAGCGACCTCT+TGG 0.443714 5_2:-21429927 Msa0762860:three_prime_UTR
GAGATCGGTGGAGGCCTCAT+GGG 0.444479 5_2:-21430628 Msa0762860:CDS
AAGGCAGACGTATATAGTTT+CGG 0.446072 5_2:+21429597 Msa0762850:CDS
CTGAATGATTTGCTGAGCTT+GGG 0.456434 5_2:-21432759 Msa0762860:CDS
AGAATTAACAGCAGAATGTC+AGG 0.456779 5_2:+21430460 Msa0762870:intron
GCAAGTAAATTGGCTTGGCC+CGG 0.467468 5_2:+21430186 Msa0762870:intron
ATGGAAGTCGGTCGGAATGA+AGG 0.467617 5_2:+21432916 None:intergenic
TCTGTAGTAAATGCTAATCA+TGG 0.471302 5_2:-21430307 Msa0762860:three_prime_UTR
TTTATTTGCTCTGCTTTCCA+TGG 0.473003 5_2:-21430135 Msa0762860:three_prime_UTR
TGCTGAGCTTGGGTCAGCAC+CGG 0.478547 5_2:-21432749 Msa0762860:CDS
GTACATCCTAGGTGGGTTGA+AGG 0.482364 5_2:-21431415 Msa0762860:intron
CAAGTAAATTGGCTTGGCCC+GGG 0.484005 5_2:+21430187 Msa0762870:intron
AGTTATGAGCTGCTACATAT+CGG 0.488938 5_2:-21430342 Msa0762860:three_prime_UTR
TTACTGGAAGACAGAACAAC+AGG 0.492566 5_2:+21429640 Msa0762850:CDS
TTGTGTTGCAGAGATGTTCC+CGG 0.492822 5_2:-21432953 Msa0762860:CDS
AACCTTCAGTGTCATAATCC+CGG 0.495200 5_2:-21430205 Msa0762860:three_prime_UTR
TGAGATCGGTGGAGGCCTCA+TGG 0.504020 5_2:-21430629 Msa0762860:CDS
GAAAAGCGCCTGTCGGTCGT+TGG 0.508235 5_2:+21432885 None:intergenic
AAATGTACTCCAATTTAAAA+CGG 0.509621 5_2:-21433026 Msa0762860:CDS
ATTTGGATCGAACAACTGTT+CGG 0.512715 5_2:-21429827 Msa0762860:three_prime_UTR
AGGCCATAAACAGAGGCTAC+AGG 0.514026 5_2:+21430934 Msa0762870:CDS
TCTGCTTTCCATGGTTACCT+GGG 0.515580 5_2:-21430126 Msa0762860:three_prime_UTR
TTGGATGTCTGCTGTGGAAG+TGG 0.515717 5_2:-21432585 Msa0762860:CDS
AAGGATAAGGAGCAACCGCC+GGG 0.515863 5_2:+21432935 None:intergenic
TGGTTTGATGCAATCACTAT+GGG 0.517163 5_2:-21431361 Msa0762860:CDS
GTGCCGCAAGTAAATTGGCT+TGG 0.519475 5_2:+21430181 Msa0762870:intron
TCAAACCAAGCATCAGAAAA+CGG 0.523537 5_2:+21431376 Msa0762870:intron
TCGCTGCTCCAACGACCGAC+AGG 0.524223 5_2:-21432893 Msa0762860:CDS
TCTAAGAAAGGTGGATTAGA+GGG 0.525624 5_2:-21430006 Msa0762860:three_prime_UTR
TGTAACGCCTTTGACATAGT+TGG 0.526764 5_2:-21429949 Msa0762860:three_prime_UTR
TCATGGTCAGTTAACAGAAA+AGG 0.527359 5_2:+21429578 Msa0762850:CDS
CGACATTATGAGATCGGTGG+AGG 0.533048 5_2:-21430637 Msa0762860:CDS
GTCGGTCGGAATGAAGGATA+AGG 0.536675 5_2:+21432922 None:intergenic
ACCTTCAGTGTCATAATCCC+GGG 0.536699 5_2:-21430204 Msa0762860:three_prime_UTR
TGACCATGAGCAAGATACTC+TGG 0.539266 5_2:-21429564 Msa0762860:three_prime_UTR
CAAATAGCTCTTTCTATCCC+AGG 0.541260 5_2:+21430109 Msa0762850:CDS
ATGGTACTCTCATCTAAGAA+AGG 0.546299 5_2:-21430018 Msa0762860:three_prime_UTR
GATGCAATCACTATGGGCTA+TGG 0.547081 5_2:-21431355 Msa0762860:CDS
AACTTTGTTAGACAAGAGAA+AGG 0.551476 5_2:+21432554 Msa0762870:CDS
CTTTGAAAGCGACCGTGATG+AGG 0.553016 5_2:+21431674 Msa0762870:CDS
ATGGGTCGCCACTTGTGTCA+TGG 0.554397 5_2:-21430047 Msa0762860:three_prime_UTR
AAGTCATACGAAAACATGAC+TGG 0.557528 5_2:+21430414 Msa0762870:intron
CTTTCTATCCCAGGTAACCA+TGG 0.559485 5_2:+21430118 Msa0762850:exon
TATTCTTAACATCGCTATTG+CGG 0.566965 5_2:-21429867 Msa0762860:three_prime_UTR
GAAGGATAAGGAGCAACCGC+CGG 0.567694 5_2:+21432934 None:intergenic
TGATAAGCGTAAAGCCATGC+AGG 0.572450 5_2:-21431317 Msa0762860:CDS
AAGCCAATTTACTTGCGGCA+CGG 0.573110 5_2:-21430179 Msa0762860:three_prime_UTR
GATATTTGTAGTCATCTGAA+AGG 0.577823 5_2:+21430914 Msa0762870:intron
GCTCCAGAGTATCTTGCTCA+TGG 0.581564 5_2:+21429561 Msa0762850:CDS
TCGGTCGTTGGAGCAGCGAA+TGG 0.583040 5_2:+21432897 None:intergenic
GGCCATAAACAGAGGCTACA+GGG 0.586319 5_2:+21430935 Msa0762870:CDS
CACACGTAAAATTTCCTGCA+TGG 0.586402 5_2:+21431303 Msa0762870:intron
CATTATAAACAAATGAAGCA+TGG 0.588493 5_2:-21430494 Msa0762860:three_prime_UTR
CTATATTCCTGGATCTGAAG+GGG 0.589192 5_2:+21429531 Msa0762850:intron
TCTATATTCCTGGATCTGAA+GGG 0.593029 5_2:+21429530 Msa0762850:intron
GCCCGGGATTATGACACTGA+AGG 0.594351 5_2:+21430203 Msa0762870:intron
ACTGCTCGACATTATGAGAT+CGG 0.594791 5_2:-21430643 Msa0762860:CDS
ACAGCCTGAACAGGGGAGGT+AGG 0.595555 5_2:+21430546 Msa0762870:intron
ACTTGTGTCATGGAGCTCCA+TGG 0.596168 5_2:-21430037 Msa0762860:three_prime_UTR
GATTGGTCTTGATTTCTCAA+AGG 0.599953 5_2:-21431712 Msa0762860:CDS
ATATTTATACAGCCTGAACA+GGG 0.603256 5_2:+21430538 Msa0762870:intron
ATTGCGACCAACTATGTCAA+AGG 0.606405 5_2:+21429942 Msa0762850:CDS
GGGCCAAGCCAATTTACTTG+CGG 0.608342 5_2:-21430184 Msa0762860:three_prime_UTR
GTACTCTCATCTAAGAAAGG+TGG 0.608348 5_2:-21430015 Msa0762860:three_prime_UTR
GCACCGGATTTGGAAGCGAA+TGG 0.615773 5_2:-21432733 Msa0762860:CDS
TGCGGTTGAAAAGCGCCTGT+CGG 0.616608 5_2:+21432878 None:intergenic
AGATCGGTGGAGGCCTCATG+GGG 0.618606 5_2:-21430627 Msa0762860:CDS
AACTAATGGTCGCCTCATCA+CGG 0.620553 5_2:-21431686 Msa0762860:CDS
CAGAAACTGATAAAATGCAA+TGG 0.628021 5_2:-21430232 Msa0762860:three_prime_UTR
TTGGAGCAGCGAATGGAAGT+CGG 0.628117 5_2:+21432904 None:intergenic
CGTGTATTGGATGTCTGCTG+TGG 0.636133 5_2:-21432591 Msa0762860:CDS
CACAGCAGACATCCAATACA+CGG 0.640805 5_2:+21432592 Msa0762870:CDS
TTTCTTAGATGAGAGTACCA+TGG 0.647966 5_2:+21430020 Msa0762850:CDS
ATGGAGCTCCATGACACAAG+TGG 0.648286 5_2:+21430039 Msa0762850:CDS
TGTACTCCAATTTAAAACGG+CGG 0.650494 5_2:-21433023 Msa0762860:CDS
AGCAGCGAATGGAAGTCGGT+CGG 0.656578 5_2:+21432908 None:intergenic
ATCTGAAAGGCCATAAACAG+AGG 0.659783 5_2:+21430927 Msa0762870:CDS
TATATTCCTGGATCTGAAGG+GGG 0.664501 5_2:+21429532 Msa0762850:intron
GCTCGACATTATGAGATCGG+TGG 0.666601 5_2:-21430640 Msa0762860:CDS
TTATACAGCCTGAACAGGGG+AGG 0.672102 5_2:+21430542 Msa0762870:intron
TATTTATACAGCCTGAACAG+GGG 0.674103 5_2:+21430539 Msa0762870:intron
TAGCTACCAAGCACCCCATG+AGG 0.708176 5_2:+21430614 Msa0762870:intron
AGGACTTCTATGCATCCAAG+AGG 0.711075 5_2:+21429912 Msa0762850:CDS
TATCATAGACAGGAGCAATG+CGG 0.761354 5_2:+21432860 None:intergenic
TGTTGCAGAGATGTTCCCGG+CGG 0.792432 5_2:-21432950 Msa0762860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTATAGTAGTAAG+AGG - chr5_2:21431770-21431789 Msa0762860:intron 15.0%
!! ATCATTTCATTCTATTCTAA+TGG - chr5_2:21429888-21429907 Msa0762860:three_prime_UTR 20.0%
!! ATAATATTGCAAAAATGAGT+TGG + chr5_2:21430094-21430113 Msa0762850:CDS 20.0%
!!! TCATTTTTGCAATATTATGT+TGG - chr5_2:21430096-21430115 Msa0762860:three_prime_UTR 20.0%
!! TAAAATAGTTAAATGAGACA+TGG - chr5_2:21430128-21430147 Msa0762860:three_prime_UTR 20.0%
!! ATATAATTAATGTGTTGTGA+AGG - chr5_2:21430161-21430180 Msa0762860:three_prime_UTR 20.0%
!! TATAATTAATGTGTTGTGAA+GGG - chr5_2:21430162-21430181 Msa0762860:three_prime_UTR 20.0%
!!! TAAGCAAAAAATCACTTTTT+AGG - chr5_2:21430294-21430313 Msa0762860:three_prime_UTR 20.0%
!! TATTATAGACCAAATACAAT+AGG - chr5_2:21430346-21430365 Msa0762860:three_prime_UTR 20.0%
!!! TAAGCAAAAAAACACTTTTT+AGG + chr5_2:21430383-21430402 Msa0762870:intron 20.0%
!! GTTAATGTATCTTGAATAAT+CGG + chr5_2:21430718-21430737 Msa0762870:intron 20.0%
!! TTATTCAAGATACATTAACA+TGG - chr5_2:21430719-21430738 Msa0762860:intron 20.0%
!!! TTAGTGTTTTAGCTTTATAA+CGG + chr5_2:21431043-21431062 Msa0762870:intron 20.0%
!!! TCAATAAGAGAATTTTTAAC+AGG - chr5_2:21431675-21431694 Msa0762860:CDS 20.0%
! TTGATTGTTGTGTTTGAATT+TGG - chr5_2:21429922-21429941 Msa0762860:three_prime_UTR 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr5_2:21430393-21430412 Msa0762870:intron 25.0%
! CATTCAACACTTAATGTATT+TGG - chr5_2:21430319-21430338 Msa0762860:three_prime_UTR 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr5_2:21430393-21430412 Msa0762860:three_prime_UTR 25.0%
!! AAGCTTTATAAACACTACAT+AGG + chr5_2:21430495-21430514 Msa0762870:intron 25.0%
!! CAGCTTTATAAACACTAAAT+AGG + chr5_2:21430643-21430662 Msa0762870:intron 25.0%
! ATCGGTTAATTGTTTAAATG+CGG + chr5_2:21430700-21430719 Msa0762870:intron 25.0%
! AAGTTGTACATTAGTATCAT+TGG - chr5_2:21431089-21431108 Msa0762860:intron 25.0%
!! ATCATTGGTGATAGTATAAT+AGG - chr5_2:21431104-21431123 Msa0762860:intron 25.0%
!! TCATTGGTGATAGTATAATA+GGG - chr5_2:21431105-21431124 Msa0762860:intron 25.0%
! TTTAATCATTTGTACATCCT+AGG - chr5_2:21431132-21431151 Msa0762860:intron 25.0%
! CAAGTCAATAACATATTGAT+TGG - chr5_2:21431303-21431322 Msa0762860:CDS 25.0%
!!! CATTGCTTTTATTAAAGTCA+AGG + chr5_2:21431387-21431406 Msa0762870:intron 25.0%
!!! TTTGTTTTCAATTGAACTGA+AGG - chr5_2:21431698-21431717 Msa0762860:CDS 25.0%
! CTAAACATTAGATGACATTT+AGG - chr5_2:21431964-21431983 Msa0762860:intron 25.0%
! CATTATAAACAAATGAAGCA+TGG - chr5_2:21432064-21432083 Msa0762860:intron 25.0%
! TAATTCTATTTGCAGTTTCA+AGG - chr5_2:21432114-21432133 Msa0762860:intron 25.0%
! CAAATGTACACTTCAATTAT+GGG + chr5_2:21432303-21432322 Msa0762870:intron 25.0%
!!! ATTTTAAGAGTGATTCACAT+AGG + chr5_2:21432669-21432688 Msa0762870:intron 25.0%
!! ATTTAACCGCCGTTTTAAAT+TGG + chr5_2:21429544-21429563 Msa0762850:intron 30.0%
GAAAGAGAAAGAAAGAAGAA+GGG + chr5_2:21429731-21429750 Msa0762850:intron 30.0%
AGAAAGAGAAAGAAAGAAGA+AGG + chr5_2:21429732-21429751 Msa0762850:intron 30.0%
! ATTTGGTAACAGAGCAAAAA+AGG - chr5_2:21429939-21429958 Msa0762860:three_prime_UTR 30.0%
! TTTGGTAACAGAGCAAAAAA+GGG - chr5_2:21429940-21429959 Msa0762860:three_prime_UTR 30.0%
AACTTTGTTAGACAAGAGAA+AGG + chr5_2:21430007-21430026 Msa0762850:CDS 30.0%
TGGAATAAAATCGGGTTTAT+TGG - chr5_2:21430185-21430204 Msa0762860:three_prime_UTR 30.0%
CATTCAACACCTATTGTATT+TGG + chr5_2:21430358-21430377 Msa0762870:intron 30.0%
AACCAACCCAAATTCTTTAT+CGG - chr5_2:21430556-21430575 Msa0762860:three_prime_UTR 30.0%
ACAAGACAACAAATCCTTTA+TGG - chr5_2:21430748-21430767 Msa0762860:intron 30.0%
TGCAAACAAAATGTCCATAA+AGG + chr5_2:21430765-21430784 Msa0762870:intron 30.0%
ATCCCAAAAGATTCACAAAA+CGG + chr5_2:21430820-21430839 Msa0762870:intron 30.0%
TCAATAATATTGAGTGAGCA+TGG - chr5_2:21430914-21430933 Msa0762860:CDS 30.0%
CAATAATATTGAGTGAGCAT+GGG - chr5_2:21430915-21430934 Msa0762860:CDS 30.0%
TCTCTCGTAAAAATACTTTC+AGG + chr5_2:21430974-21430993 Msa0762870:CDS 30.0%
GCTACTAACTTCTTCATTTA+CGG - chr5_2:21431408-21431427 Msa0762860:intron 30.0%
GCAAAACATAAATGTTGCAA+GGG + chr5_2:21431438-21431457 Msa0762870:intron 30.0%
GATATTTGTAGTCATCTGAA+AGG + chr5_2:21431647-21431666 Msa0762870:CDS 30.0%
!! CACAGGAGTATTATTAAGTT+AGG + chr5_2:21431848-21431867 Msa0762870:intron 30.0%
ATATTTATACAGCCTGAACA+GGG + chr5_2:21432023-21432042 Msa0762870:intron 30.0%
TATATTTATACAGCCTGAAC+AGG + chr5_2:21432024-21432043 Msa0762870:intron 30.0%
TCTGTAGTAAATGCTAATCA+TGG - chr5_2:21432251-21432270 Msa0762860:intron 30.0%
CCAAATGTACACTTCAATTA+TGG + chr5_2:21432304-21432323 Msa0762870:intron 30.0%
CCATAATTGAAGTGTACATT+TGG - chr5_2:21432301-21432320 Msa0762860:intron 30.0%
CAGAAACTGATAAAATGCAA+TGG - chr5_2:21432326-21432345 Msa0762860:intron 30.0%
TATTCTTAACATCGCTATTG+CGG - chr5_2:21432691-21432710 Msa0762860:intron 30.0%
TTGTTGTGCATCTCTATATT+TGG - chr5_2:21432714-21432733 Msa0762860:intron 30.0%
! AAATTTTGCAAGATCAGACA+TGG + chr5_2:21432779-21432798 Msa0762870:CDS 30.0%
! TTCTGATTGTTGTTCAACTA+AGG + chr5_2:21432831-21432850 Msa0762870:CDS 30.0%
TTCAGACAGTTTAGTTATAG+TGG + chr5_2:21432881-21432900 None:intergenic 30.0%
! TGTACTCCAATTTAAAACGG+CGG - chr5_2:21429535-21429554 Msa0762860:three_prime_UTR 35.0%
ATTCAGCTGCAACAATGAAA+AGG + chr5_2:21429785-21429804 Msa0762850:intron 35.0%
TAGTTAAATGAGACATGGTG+AGG - chr5_2:21430133-21430152 Msa0762860:three_prime_UTR 35.0%
AATTAATGTGTTGTGAAGGG+TGG - chr5_2:21430165-21430184 Msa0762860:three_prime_UTR 35.0%
TGTGAAGGGTGGAATAAAAT+CGG - chr5_2:21430176-21430195 Msa0762860:three_prime_UTR 35.0%
ATCCGATAAAGAATTTGGGT+TGG + chr5_2:21430561-21430580 Msa0762870:intron 35.0%
TGGGATCCGATAAAGAATTT+GGG + chr5_2:21430565-21430584 Msa0762870:intron 35.0%
TTGGGATCCGATAAAGAATT+TGG + chr5_2:21430566-21430585 Msa0762870:intron 35.0%
! TCACCGTTTTGTGAATCTTT+TGG - chr5_2:21430814-21430833 Msa0762860:intron 35.0%
! CACCGTTTTGTGAATCTTTT+GGG - chr5_2:21430815-21430834 Msa0762860:intron 35.0%
!!! TTGTGAATCTTTTGGGATGT+AGG - chr5_2:21430822-21430841 Msa0762860:intron 35.0%
!! GATTGGTCTTGATTTCTCAA+AGG - chr5_2:21430846-21430865 Msa0762860:intron 35.0%
TTTCTCAAAGGAGCAACTAA+TGG - chr5_2:21430858-21430877 Msa0762860:intron 35.0%
TCAGGCTGTTATCTAATTTC+AGG + chr5_2:21430956-21430975 Msa0762870:CDS 35.0%
!! TAGCTTTATAACGGAGAACA+TGG + chr5_2:21431034-21431053 Msa0762870:intron 35.0%
AATCATTTGTACATCCTAGG+TGG - chr5_2:21431135-21431154 Msa0762860:intron 35.0%
ATCATTTGTACATCCTAGGT+GGG - chr5_2:21431136-21431155 Msa0762860:intron 35.0%
TCAAACCAAGCATCAGAAAA+CGG + chr5_2:21431185-21431204 Msa0762870:intron 35.0%
! TTGGTTTGATGCAATCACTA+TGG - chr5_2:21431196-21431215 Msa0762860:intron 35.0%
TGGTTTGATGCAATCACTAT+GGG - chr5_2:21431197-21431216 Msa0762860:intron 35.0%
CGCAAAACATAAATGTTGCA+AGG + chr5_2:21431439-21431458 Msa0762870:intron 35.0%
CCAAAGAATCAAAAAGACGA+AGG + chr5_2:21431541-21431560 Msa0762870:intron 35.0%
!! CCTTCGTCTTTTTGATTCTT+TGG - chr5_2:21431538-21431557 Msa0762860:intron 35.0%
!! TTTTGATTCTTTGGTGTGAG+CGG - chr5_2:21431547-21431566 Msa0762860:intron 35.0%
TTATCCGATCAAGCGTAAAT+TGG - chr5_2:21431724-21431743 Msa0762860:intron 35.0%
TGTTCCAATTTACGCTTGAT+CGG + chr5_2:21431731-21431750 Msa0762870:CDS 35.0%
TAATAATACTCCTGTGATGC+AGG - chr5_2:21431852-21431871 Msa0762860:intron 35.0%
AATAATACTCCTGTGATGCA+GGG - chr5_2:21431853-21431872 Msa0762860:intron 35.0%
!! GAGAAACTTGCTTTAGAAGT+AGG - chr5_2:21431885-21431904 Msa0762860:intron 35.0%
TATTTATACAGCCTGAACAG+GGG + chr5_2:21432022-21432041 Msa0762870:intron 35.0%
AGAATTAACAGCAGAATGTC+AGG + chr5_2:21432101-21432120 Msa0762870:intron 35.0%
AAGTCATACGAAAACATGAC+TGG + chr5_2:21432147-21432166 Msa0762870:intron 35.0%
AGTTATGAGCTGCTACATAT+CGG - chr5_2:21432216-21432235 Msa0762860:intron 35.0%
TTTATTTGCTCTGCTTTCCA+TGG - chr5_2:21432423-21432442 Msa0762860:intron 35.0%
! CAACTGAATCATCTGTTTTG+AGG - chr5_2:21432481-21432500 Msa0762860:intron 35.0%
!!! TCTGTTTTGAGGAGGTAAAA+TGG - chr5_2:21432492-21432511 Msa0762860:intron 35.0%
!!! CTGTTTTGAGGAGGTAAAAT+GGG - chr5_2:21432493-21432512 Msa0762860:intron 35.0%
!! TTTCTTAGATGAGAGTACCA+TGG + chr5_2:21432541-21432560 Msa0762870:CDS 35.0%
ATGGTACTCTCATCTAAGAA+AGG - chr5_2:21432540-21432559 Msa0762860:intron 35.0%
!! ATCTAAGAAAGGTGGATTAG+AGG - chr5_2:21432551-21432570 Msa0762860:intron 35.0%
!! TCTAAGAAAGGTGGATTAGA+GGG - chr5_2:21432552-21432571 Msa0762860:intron 35.0%
AACAAGATGCTCTTCATTCT+TGG - chr5_2:21432578-21432597 Msa0762860:CDS 35.0%
ATTTGGATCGAACAACTGTT+CGG - chr5_2:21432731-21432750 Msa0762860:CDS 35.0%
CAATCAGAACAAAACAACAG+AGG - chr5_2:21432842-21432861 Msa0762860:intron 35.0%
TTACTGCTAGAGATAGTTAC+TGG + chr5_2:21432937-21432956 None:intergenic 35.0%
AAGGCAGACGTATATAGTTT+CGG + chr5_2:21432964-21432983 None:intergenic 35.0%
TCATGGTCAGTTAACAGAAA+AGG + chr5_2:21432983-21433002 None:intergenic 35.0%
TATCATAGACAGGAGCAATG+CGG + chr5_2:21429701-21429720 Msa0762850:intron 40.0%
! GCAACAATGAAAAGGTGTGA+AGG + chr5_2:21429777-21429796 Msa0762850:intron 40.0%
!! CTGAATGATTTGCTGAGCTT+GGG - chr5_2:21429799-21429818 Msa0762860:three_prime_UTR 40.0%
AAAAAAGGGTGACCGTGTAT+TGG - chr5_2:21429954-21429973 Msa0762860:three_prime_UTR 40.0%
TCTAACAAAGTTGCCTCCAA+TGG - chr5_2:21430015-21430034 Msa0762860:three_prime_UTR 40.0%
GTGAAGGGTGGAATAAAATC+GGG - chr5_2:21430177-21430196 Msa0762860:three_prime_UTR 40.0%
TGGAAATTCCACCTTCATTG+CGG - chr5_2:21430205-21430224 Msa0762860:three_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr5_2:21430397-21430416 Msa0762870:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr5_2:21430396-21430415 Msa0762870:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr5_2:21430396-21430415 Msa0762860:three_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr5_2:21430397-21430416 Msa0762860:three_prime_UTR 40.0%
TGGGTGTGAATGAGTGAATT+TGG - chr5_2:21430446-21430465 Msa0762860:three_prime_UTR 40.0%
CTACATAGGTCGTATCTCTA+GGG + chr5_2:21430481-21430500 Msa0762870:intron 40.0%
ACTACATAGGTCGTATCTCT+AGG + chr5_2:21430482-21430501 Msa0762870:intron 40.0%
! CAACTTGTAAGGTGATGGTT+GGG + chr5_2:21430519-21430538 Msa0762870:intron 40.0%
GAAACCAACTTGTAAGGTGA+TGG + chr5_2:21430524-21430543 Msa0762870:intron 40.0%
!! TCACCTTACAAGTTGGTTTC+CGG - chr5_2:21430524-21430543 Msa0762860:three_prime_UTR 40.0%
! TTTATCGGATCCCAACGTTT+TGG - chr5_2:21430571-21430590 Msa0762860:three_prime_UTR 40.0%
! TTATCGGATCCCAACGTTTT+GGG - chr5_2:21430572-21430591 Msa0762860:three_prime_UTR 40.0%
CCTTTCATACCCAAAACGTT+GGG + chr5_2:21430584-21430603 Msa0762870:intron 40.0%
!! CCAACGTTTTGGGTATGAAA+GGG - chr5_2:21430582-21430601 Msa0762860:three_prime_UTR 40.0%
AAATAGGCCCATATCTCTGT+GGG + chr5_2:21430627-21430646 Msa0762870:intron 40.0%
TAAATAGGCCCATATCTCTG+TGG + chr5_2:21430628-21430647 Msa0762870:intron 40.0%
!!! TCTTTTGGGATGTAGGTGAT+TGG - chr5_2:21430829-21430848 Msa0762860:intron 40.0%
CACACGTAAAATTTCCTGCA+TGG + chr5_2:21431258-21431277 Msa0762870:intron 40.0%
ACTTGAGATACAACAGCTAC+CGG + chr5_2:21431288-21431307 Msa0762870:intron 40.0%
!!! CGTGCTACTTTTTACTTTCC+AGG - chr5_2:21431346-21431365 Msa0762860:CDS 40.0%
TTTGCGCTGCTTAAGTTTAG+AGG - chr5_2:21431453-21431472 Msa0762860:intron 40.0%
ATCTGAAAGGCCATAAACAG+AGG + chr5_2:21431634-21431653 Msa0762870:CDS 40.0%
ACTGCTCGACATTATGAGAT+CGG - chr5_2:21431915-21431934 Msa0762860:intron 40.0%
AACCTTCAGTGTCATAATCC+CGG - chr5_2:21432353-21432372 Msa0762860:intron 40.0%
CAAATAGCTCTTTCTATCCC+AGG + chr5_2:21432452-21432471 Msa0762870:intron 40.0%
!!! CTGAATCATCTGTTTTGAGG+AGG - chr5_2:21432484-21432503 Msa0762860:intron 40.0%
GTACTCTCATCTAAGAAAGG+TGG - chr5_2:21432543-21432562 Msa0762860:intron 40.0%
TGTAACGCCTTTGACATAGT+TGG - chr5_2:21432609-21432628 Msa0762860:CDS 40.0%
ATTGCGACCAACTATGTCAA+AGG + chr5_2:21432619-21432638 Msa0762870:intron 40.0%
!!! ACATGGAAGCATTTTCAGTC+GGG + chr5_2:21432762-21432781 Msa0762870:CDS 40.0%
!!! GACATGGAAGCATTTTCAGT+CGG + chr5_2:21432763-21432782 Msa0762870:CDS 40.0%
TTACTGGAAGACAGAACAAC+AGG + chr5_2:21432921-21432940 None:intergenic 40.0%
TTGTGTTGCAGAGATGTTCC+CGG - chr5_2:21429605-21429624 Msa0762860:three_prime_UTR 45.0%
!! GCTGAATGATTTGCTGAGCT+TGG - chr5_2:21429798-21429817 Msa0762860:intron 45.0%
CACAGCAGACATCCAATACA+CGG + chr5_2:21429969-21429988 Msa0762850:CDS 45.0%
GGAGTAGCTTCCAACACATT+CGG - chr5_2:21430418-21430437 Msa0762860:three_prime_UTR 45.0%
!! TTCCAACACATTCGGTGTGT+TGG - chr5_2:21430426-21430445 Msa0762860:three_prime_UTR 45.0%
!! TCCAACACATTCGGTGTGTT+GGG - chr5_2:21430427-21430446 Msa0762860:three_prime_UTR 45.0%
! GTCGTATCTCTAGGGAATGT+GGG + chr5_2:21430473-21430492 Msa0762870:intron 45.0%
! CCAACTTGTAAGGTGATGGT+TGG + chr5_2:21430520-21430539 Msa0762870:intron 45.0%
CCAACCATCACCTTACAAGT+TGG - chr5_2:21430517-21430536 Msa0762860:three_prime_UTR 45.0%
CAACCGGAAACCAACTTGTA+AGG + chr5_2:21430530-21430549 Msa0762870:intron 45.0%
!! TGGGTTGGTTCTAACTCAAC+CGG + chr5_2:21430546-21430565 Msa0762870:intron 45.0%
!! CCCAACGTTTTGGGTATGAA+AGG - chr5_2:21430581-21430600 Msa0762860:three_prime_UTR 45.0%
CCCTTTCATACCCAAAACGT+TGG + chr5_2:21430585-21430604 Msa0762870:intron 45.0%
CACATTGCCCACAGAGATAT+GGG - chr5_2:21430617-21430636 Msa0762860:CDS 45.0%
AACTAATGGTCGCCTCATCA+CGG - chr5_2:21430872-21430891 Msa0762860:intron 45.0%
!!! ACTTGCCGTTTTCTGATGCT+TGG - chr5_2:21431177-21431196 Msa0762860:CDS 45.0%
! GATGCAATCACTATGGGCTA+TGG - chr5_2:21431203-21431222 Msa0762860:intron 45.0%
TGATAAGCGTAAAGCCATGC+AGG - chr5_2:21431241-21431260 Msa0762860:intron 45.0%
! ATTTTACGTGTGCTGAAGCC+CGG - chr5_2:21431266-21431285 Msa0762860:intron 45.0%
CTTGAGATACAACAGCTACC+GGG + chr5_2:21431287-21431306 Msa0762870:intron 45.0%
AGGATAGATGCTGTAGAACC+TGG + chr5_2:21431367-21431386 Msa0762870:intron 45.0%
CTAACCCCATTTCTCGTTCT+AGG - chr5_2:21431575-21431594 Msa0762860:intron 45.0%
CACTCCTAGAACGAGAAATG+GGG + chr5_2:21431582-21431601 Msa0762870:intron 45.0%
CCACTCCTAGAACGAGAAAT+GGG + chr5_2:21431583-21431602 Msa0762870:intron 45.0%
TCCACTCCTAGAACGAGAAA+TGG + chr5_2:21431584-21431603 Msa0762870:intron 45.0%
CAGGGGAGGTAGGAATTTAT+TGG + chr5_2:21432005-21432024 Msa0762870:intron 45.0%
ACCTTCAGTGTCATAATCCC+GGG - chr5_2:21432354-21432373 Msa0762860:intron 45.0%
AAGCCAATTTACTTGCGGCA+CGG - chr5_2:21432379-21432398 Msa0762860:intron 45.0%
TCTGCTTTCCATGGTTACCT+GGG - chr5_2:21432432-21432451 Msa0762860:intron 45.0%
CTTTCTATCCCAGGTAACCA+TGG + chr5_2:21432443-21432462 Msa0762870:intron 45.0%
AGGACTTCTATGCATCCAAG+AGG + chr5_2:21432649-21432668 Msa0762870:intron 45.0%
!!! CATGGAAGCATTTTCAGTCG+GGG + chr5_2:21432761-21432780 Msa0762870:CDS 45.0%
TGACCATGAGCAAGATACTC+TGG - chr5_2:21432994-21433013 Msa0762860:CDS 45.0%
GTCGGTCGGAATGAAGGATA+AGG + chr5_2:21429639-21429658 Msa0762850:CDS 50.0%
ATGGAAGTCGGTCGGAATGA+AGG + chr5_2:21429645-21429664 Msa0762850:CDS 50.0%
TTGGAGCAGCGAATGGAAGT+CGG + chr5_2:21429657-21429676 Msa0762850:CDS 50.0%
CAGCCATTCGCTTCCAAATC+CGG + chr5_2:21429831-21429850 Msa0762850:CDS 50.0%
!! GGAAGCGAATGGCTGTTTCT+TGG - chr5_2:21429836-21429855 Msa0762860:three_prime_UTR 50.0%
CGTGTATTGGATGTCTGCTG+TGG - chr5_2:21429967-21429986 Msa0762860:three_prime_UTR 50.0%
TTGGATGTCTGCTGTGGAAG+TGG - chr5_2:21429973-21429992 Msa0762860:three_prime_UTR 50.0%
CAAAGTTGCCTCCAATGGCA+AGG - chr5_2:21430020-21430039 Msa0762860:three_prime_UTR 50.0%
AGAAGAGCTTGCCTTGCCAT+TGG + chr5_2:21430034-21430053 Msa0762850:CDS 50.0%
TGCCCCTAGCTGCCTAATTA+CGG - chr5_2:21430230-21430249 Msa0762860:three_prime_UTR 50.0%
ACGCCGTAATTAGGCAGCTA+GGG + chr5_2:21430236-21430255 Msa0762870:intron 50.0%
AACGCCGTAATTAGGCAGCT+AGG + chr5_2:21430237-21430256 Msa0762870:intron 50.0%
AGCTGCCTAATTACGGCGTT+TGG - chr5_2:21430237-21430256 Msa0762860:three_prime_UTR 50.0%
GCTGCCTAATTACGGCGTTT+GGG - chr5_2:21430238-21430257 Msa0762860:three_prime_UTR 50.0%
GCAACCCAAACGCCGTAATT+AGG + chr5_2:21430245-21430264 Msa0762870:intron 50.0%
TGCCTTCATTGTACTCCCTC+CGG - chr5_2:21430262-21430281 Msa0762860:three_prime_UTR 50.0%
ACCCAACACACCGAATGTGT+TGG + chr5_2:21430431-21430450 Msa0762870:intron 50.0%
! GGTCGTATCTCTAGGGAATG+TGG + chr5_2:21430474-21430493 Msa0762870:intron 50.0%
CCATATCTCTGTGGGCAATG+TGG + chr5_2:21430619-21430638 Msa0762870:intron 50.0%
CCACATTGCCCACAGAGATA+TGG - chr5_2:21430616-21430635 Msa0762860:CDS 50.0%
! CTTTGAAAGCGACCGTGATG+AGG + chr5_2:21430887-21430906 Msa0762870:intron 50.0%
!! GTACATCCTAGGTGGGTTGA+AGG - chr5_2:21431143-21431162 Msa0762860:intron 50.0%
! GATTCTTTGGTGTGAGCGGA+AGG - chr5_2:21431551-21431570 Msa0762860:intron 50.0%
!! CCCATTTCTCGTTCTAGGAG+TGG - chr5_2:21431580-21431599 Msa0762860:intron 50.0%
GTCCCTGTAGCCTCTGTTTA+TGG - chr5_2:21431621-21431640 Msa0762860:intron 50.0%
GGCCATAAACAGAGGCTACA+GGG + chr5_2:21431626-21431645 Msa0762870:intron 50.0%
AGGCCATAAACAGAGGCTAC+AGG + chr5_2:21431627-21431646 Msa0762870:CDS 50.0%
ATACTCCTGTGATGCAGGGA+AGG - chr5_2:21431857-21431876 Msa0762860:intron 50.0%
CAATTCCTTCCCTGCATCAC+AGG + chr5_2:21431865-21431884 Msa0762870:intron 50.0%
CTGTGATGCAGGGAAGGAAT+TGG - chr5_2:21431863-21431882 Msa0762860:intron 50.0%
GCTCGACATTATGAGATCGG+TGG - chr5_2:21431918-21431937 Msa0762860:intron 50.0%
CGACATTATGAGATCGGTGG+AGG - chr5_2:21431921-21431940 Msa0762860:intron 50.0%
AATTCCTACCTCCCCTGTTC+AGG - chr5_2:21432008-21432027 Msa0762860:intron 50.0%
TTATACAGCCTGAACAGGGG+AGG + chr5_2:21432019-21432038 Msa0762870:intron 50.0%
!! CAAGTAAATTGGCTTGGCCC+GGG + chr5_2:21432374-21432393 Msa0762870:intron 50.0%
!! GCAAGTAAATTGGCTTGGCC+CGG + chr5_2:21432375-21432394 Msa0762870:intron 50.0%
GGGCCAAGCCAATTTACTTG+CGG - chr5_2:21432374-21432393 Msa0762860:intron 50.0%
GTGCCGCAAGTAAATTGGCT+TGG + chr5_2:21432380-21432399 Msa0762870:intron 50.0%
CTCTGCTTTCCATGGTTACC+TGG - chr5_2:21432431-21432450 Msa0762860:intron 50.0%
ATGGAGCTCCATGACACAAG+TGG + chr5_2:21432522-21432541 Msa0762870:CDS 50.0%
ACTTGTGTCATGGAGCTCCA+TGG - chr5_2:21432521-21432540 Msa0762860:intron 50.0%
! GCTCCAGAGTATCTTGCTCA+TGG + chr5_2:21433000-21433019 None:intergenic 50.0%
! CTGGATCTGAAGGGGGTATA+TGG + chr5_2:21433022-21433041 None:intergenic 50.0%
CATATACCCCCTTCAGATCC+AGG - chr5_2:21433020-21433039 Msa0762860:CDS 50.0%
TGTTGCAGAGATGTTCCCGG+CGG - chr5_2:21429608-21429627 Msa0762860:three_prime_UTR 55.0%
AAGGATAAGGAGCAACCGCC+GGG + chr5_2:21429626-21429645 Msa0762850:CDS 55.0%
GAAGGATAAGGAGCAACCGC+CGG + chr5_2:21429627-21429646 Msa0762850:CDS 55.0%
AGCAGCGAATGGAAGTCGGT+CGG + chr5_2:21429653-21429672 Msa0762850:CDS 55.0%
!! TGCGGTTGAAAAGCGCCTGT+CGG + chr5_2:21429683-21429702 Msa0762850:intron 55.0%
GGGCGCACGTTATCATAGAC+AGG + chr5_2:21429711-21429730 Msa0762850:intron 55.0%
GCACCGGATTTGGAAGCGAA+TGG - chr5_2:21429825-21429844 Msa0762860:three_prime_UTR 55.0%
AGAGCTTGCCTTGCCATTGG+AGG + chr5_2:21430031-21430050 Msa0762850:CDS 55.0%
CGCCGTAATTAGGCAGCTAG+GGG + chr5_2:21430235-21430254 Msa0762870:intron 55.0%
! GACCGGAGGGAGTACAATGA+AGG + chr5_2:21430267-21430286 Msa0762870:intron 55.0%
GTGTTGGAAGCTACTCCCTC+CGG + chr5_2:21430415-21430434 Msa0762870:intron 55.0%
GCATCACCTTCAACCCACCT+AGG + chr5_2:21431152-21431171 Msa0762870:intron 55.0%
TAGCTACCAAGCACCCCATG+AGG + chr5_2:21431947-21431966 Msa0762870:intron 55.0%
GCCCGGGATTATGACACTGA+AGG + chr5_2:21432358-21432377 Msa0762870:intron 55.0%
CTGCCGTGCCGCAAGTAAAT+TGG + chr5_2:21432385-21432404 Msa0762870:intron 55.0%
ATGGGTCGCCACTTGTGTCA+TGG - chr5_2:21432511-21432530 Msa0762860:intron 55.0%
GTCGCAATGAAGCGACCTCT+TGG - chr5_2:21432631-21432650 Msa0762860:intron 55.0%
TCGGTCGTTGGAGCAGCGAA+TGG + chr5_2:21429664-21429683 Msa0762850:CDS 60.0%
!! GAAAAGCGCCTGTCGGTCGT+TGG + chr5_2:21429676-21429695 Msa0762850:CDS 60.0%
TGCTGAGCTTGGGTCAGCAC+CGG - chr5_2:21429809-21429828 Msa0762860:three_prime_UTR 60.0%
! GCTTGGGTCAGCACCGGATT+TGG - chr5_2:21429815-21429834 Msa0762860:three_prime_UTR 60.0%
! CTAGGGGCACACCGCAATGA+AGG + chr5_2:21430219-21430238 Msa0762870:intron 60.0%
TGAGATCGGTGGAGGCCTCA+TGG - chr5_2:21431929-21431948 Msa0762860:intron 60.0%
GAGATCGGTGGAGGCCTCAT+GGG - chr5_2:21431930-21431949 Msa0762860:intron 60.0%
AGATCGGTGGAGGCCTCATG+GGG - chr5_2:21431931-21431950 Msa0762860:intron 60.0%
ACAGCCTGAACAGGGGAGGT+AGG + chr5_2:21432015-21432034 Msa0762870:intron 60.0%
TCGCTGCTCCAACGACCGAC+AGG - chr5_2:21429665-21429684 Msa0762860:three_prime_UTR 65.0%
GGGGCACACCGCAATGAAGG+TGG + chr5_2:21430216-21430235 Msa0762870:intron 65.0%
! TGGAGGCCTCATGGGGTGCT+TGG - chr5_2:21431938-21431957 Msa0762860:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 21429534 21433046 21429534 ID=Msa0762860;Name=Msa0762860
chr5_2 mRNA 21429534 21433046 21429534 ID=Msa0762860-mRNA-1;Parent=Msa0762860;Name=Msa0762860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.87|0.77|1|0.75|0.66|9|975|268
chr5_2 exon 21429534 21429701 21429534 ID=Msa0762860-mRNA-1:exon:8960;Parent=Msa0762860-mRNA-1
chr5_2 exon 21429799 21430706 21429799 ID=Msa0762860-mRNA-1:exon:8959;Parent=Msa0762860-mRNA-1
chr5_2 exon 21430884 21430983 21430884 ID=Msa0762860-mRNA-1:exon:8958;Parent=Msa0762860-mRNA-1
chr5_2 exon 21431151 21431212 21431151 ID=Msa0762860-mRNA-1:exon:8957;Parent=Msa0762860-mRNA-1
chr5_2 exon 21431293 21431426 21431293 ID=Msa0762860-mRNA-1:exon:8956;Parent=Msa0762860-mRNA-1
chr5_2 exon 21431654 21431736 21431654 ID=Msa0762860-mRNA-1:exon:8955;Parent=Msa0762860-mRNA-1
chr5_2 exon 21432557 21432629 21432557 ID=Msa0762860-mRNA-1:exon:8954;Parent=Msa0762860-mRNA-1
chr5_2 exon 21432717 21432781 21432717 ID=Msa0762860-mRNA-1:exon:8953;Parent=Msa0762860-mRNA-1
chr5_2 exon 21432858 21433046 21432858 ID=Msa0762860-mRNA-1:exon:8952;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21432858 21433046 21432858 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21432717 21432781 21432717 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21432557 21432629 21432557 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21431654 21431736 21431654 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21431293 21431426 21431293 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21431151 21431212 21431151 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21430884 21430983 21430884 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 CDS 21430606 21430706 21430606 ID=Msa0762860-mRNA-1:cds;Parent=Msa0762860-mRNA-1
chr5_2 three_prime_UTR 21429799 21430605 21429799 ID=Msa0762860-mRNA-1:three_prime_utr;Parent=Msa0762860-mRNA-1
chr5_2 three_prime_UTR 21429534 21429701 21429534 ID=Msa0762860-mRNA-1:three_prime_utr;Parent=Msa0762860-mRNA-1
Gene Sequence

>Msa0762860

ATGTACTCCAATTTAAAACGGCGGTTAAATAAAAACACGTACTTTAATTTGACACGTGAGAGTTGTGAATGTTGTGTTGCAGAGATGTTCCCGGCGGTTGCTCCTTATCCTTCATTCCGACCGACTTCCATTCGCTGCTCCAACGACCGACAGGCGCTTTTCAACCGCATTGCTCCTGTCTATGATAACCTGAATGATTTGCTGAGCTTGGGTCAGCACCGGATTTGGAAGCGAATGGCTGTTTCTTGGACTGAAGCAAAAAAGGGTGACCGTGTATTGGATGTCTGCTGTGGAAGTGGTGATTTATCCTTTCTCTTGTCTAACAAAGTGATTGGTCTTGATTTCTCAAAGGAGCAACTAATGGTCGCCTCATCACGGTCGCTTTCAAAGAATTGCTTCAATAATATTGAGTGGGTTGAAGGTGATGCTCTTGACTTGCCGTTTTCTGATGCTTGGTTTGATGCAATCACTATGGGCTATGGTCTTCGAAATGTTGTTGATAAGCGTAAAGCCATGCAGGAAATTTTACGTGTGCTGAAGCCCGGTTCTACAGCATCTATCCTTGACTTTAATAAAAGCAATGAGCTACTAACTTCTTCATTTACGGAGTGGATGATTGACAATATTGTTGTCCCTGTAGCCTCTGTTTATGGCCTTTCAGATGACTACAAATATCTCAAAAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGAAACTTGCTTTAGAAGTAGGATTTTCTACTGCTCGACATTATGAGATCGGTGGAGGCCTCATGGGGTGCTTGGTAGCTAAACATTAG

Protein sequence

>Msa0762860

MYSNLKRRLNKNTYFNLTRESCECCVAEMFPAVAPYPSFRPTSIRCSNDRQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTEAKKGDRVLDVCCGSGDLSFLLSNKVIGLDFSKEQLMVASSRSLSKNCFNNIEWVEGDALDLPFSDAWFDAITMGYGLRNVVDKRKAMQEILRVLKPGSTASILDFNKSNELLTSSFTEWMIDNIVVPVASVYGLSDDYKYLKSSIREFLTGKELEKLALEVGFSTARHYEIGGGLMGCLVAKH*