AlfalfaGEDB | Msa0687280

M. sativa cultivar zhongmu-4 / Msa0687280

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0687280	XP_013456511.1	82.692	260	28	4	1	258	1	245	1.91e-135	392

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0687280	A0A072ULG4	82.692	260	28	4	1	258	1	245	9.11e-136	392

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0029850	Msa0687280	0.815015	1.147556e-51	-8.615850e-47
Msa0037880	Msa0687280	0.821642	3.621949e-53	-8.615850e-47
Msa0043980	Msa0687280	0.801587	8.390957e-49	-8.615850e-47
Msa0075880	Msa0687280	0.808543	2.941689e-50	-8.615850e-47
Msa0078420	Msa0687280	0.805110	1.563964e-49	-8.615850e-47
Msa0084430	Msa0687280	0.802404	5.700414e-49	-8.615850e-47
Msa0090550	Msa0687280	0.816303	5.928617e-52	-8.615850e-47
Msa0104800	Msa0687280	0.808595	2.866924e-50	-8.615850e-47
Msa0114430	Msa0687280	0.802787	4.753964e-49	-8.615850e-47
Msa0603370	Msa0687280	0.824988	5.988435e-54	-8.615850e-47
Msa0618360	Msa0687280	0.810654	1.035417e-50	-8.615850e-47
Msa0626990	Msa0687280	0.839667	1.381380e-57	-8.615850e-47
Msa0627350	Msa0687280	0.841323	5.095821e-58	-8.615850e-47
Msa0636020	Msa0687280	0.803780	2.960660e-49	-8.615850e-47
Msa0638350	Msa0687280	0.810356	1.200385e-50	-8.615850e-47
Msa0659400	Msa0687280	0.804430	2.168486e-49	-8.615850e-47
Msa0679550	Msa0687280	0.824502	7.797704e-54	-8.615850e-47
Msa0687280	Msa0688070	0.805336	1.401998e-49	-8.615850e-47
Msa0687280	Msa0696540	0.820071	8.325813e-53	-8.615850e-47
Msa0687280	Msa0703780	0.808504	2.998434e-50	-8.615850e-47
Msa0687280	Msa0731180	0.813107	3.025512e-51	-8.615850e-47
Msa0687280	Msa0744170	-0.800049	1.729128e-48	-8.615850e-47
Msa0687280	Msa0749440	0.809592	1.753702e-50	-8.615850e-47
Msa0687280	Msa0751850	0.812989	3.212367e-51	-8.615850e-47
Msa0687280	Msa0773590	0.800269	1.559913e-48	-8.615850e-47
Msa0687280	Msa0831590	0.807700	4.446552e-50	-8.615850e-47
Msa0687280	Msa0831850	0.857970	1.135034e-62	-8.615850e-47
Msa0687280	Msa0832090	0.802956	4.385840e-49	-8.615850e-47
Msa0687280	Msa0844490	0.805173	1.517199e-49	-8.615850e-47
Msa0687280	Msa0847880	0.802198	6.286354e-49	-8.615850e-47
Msa0687280	Msa0866400	0.806226	9.117709e-50	-8.615850e-47
Msa0687280	Msa0866410	0.822773	1.979684e-53	-8.615850e-47
Msa0687280	Msa0903390	0.823045	1.711186e-53	-8.615850e-47
Msa0687280	Msa0924310	0.816333	5.838909e-52	-8.615850e-47
Msa0687280	Msa0925250	0.805994	1.020242e-49	-8.615850e-47
Msa0687280	Msa0925870	0.807484	4.943378e-50	-8.615850e-47
Msa0687280	Msa0927380	0.802566	5.279560e-49	-8.615850e-47
Msa0687280	Msa0953120	0.808829	2.555378e-50	-8.615850e-47
Msa0687280	Msa0969520	0.818265	2.145311e-52	-8.615850e-47
Msa0687280	Msa0999100	0.806594	7.626288e-50	-8.615850e-47
Msa0687280	Msa1008750	0.861251	1.170192e-63	-8.615850e-47
Msa0687280	Msa1063420	0.814066	1.861745e-51	-8.615850e-47
Msa0687280	Msa1096060	0.803257	3.801119e-49	-8.615850e-47
Msa0687280	Msa1098250	0.808856	2.521620e-50	-8.615850e-47
Msa0687280	Msa1100130	-0.801114	1.048758e-48	-8.615850e-47
Msa0687280	Msa1111870	0.812587	3.933008e-51	-8.615850e-47
Msa0687280	Msa1118760	0.812929	3.310853e-51	-8.615850e-47
Msa0687280	Msa1121110	0.826202	3.087785e-54	-8.615850e-47
Msa0687280	Msa1127770	0.805035	1.621201e-49	-8.615850e-47
Msa0687280	Msa1130530	0.807185	5.718901e-50	-8.615850e-47
Msa0687280	Msa1143020	0.801525	8.641626e-49	-8.615850e-47
Msa0687280	Msa1162060	0.800757	1.240607e-48	-8.615850e-47
Msa0687280	Msa1174310	0.803313	3.699763e-49	-8.615850e-47
Msa0687280	Msa1177780	0.809497	1.837579e-50	-8.615850e-47
Msa0687280	Msa1224480	0.803040	4.214440e-49	-8.615850e-47
Msa0687280	Msa1224580	-0.834538	2.828682e-56	-8.615850e-47
Msa0687280	Msa1258370	0.830598	2.683170e-55	-8.615850e-47
Msa0687280	Msa1270660	0.832808	7.650838e-56	-8.615850e-47
Msa0687280	Msa1270730	0.821884	3.184809e-53	-8.615850e-47
Msa0687280	Msa1276440	0.800285	1.548709e-48	-8.615850e-47
Msa0687280	Msa1291450	0.806162	9.405002e-50	-8.615850e-47
Msa0687280	Msa1305350	0.802403	5.703822e-49	-8.615850e-47
Msa0687280	Msa1307550	0.819672	1.027144e-52	-8.615850e-47
Msa0687280	Msa1314770	0.802333	5.896119e-49	-8.615850e-47
Msa0687280	Msa1333730	0.802639	5.100390e-49	-8.615850e-47
Msa0687280	Msa1335230	0.804943	1.694346e-49	-8.615850e-47
Msa0687280	Msa1341810	0.801383	9.240932e-49	-8.615850e-47
Msa0687280	Msa1364370	0.813374	2.644279e-51	-8.615850e-47
Msa0687280	Msa1371940	0.807434	5.065002e-50	-8.615850e-47
Msa0687280	Msa1372150	0.815458	9.152414e-52	-8.615850e-47
Msa0687280	Msa1378940	0.820368	7.116508e-53	-8.615850e-47
Msa0687280	Msa1379590	0.810536	1.097899e-50	-8.615850e-47
Msa0687280	Msa1380900	0.800282	1.550792e-48	-8.615850e-47
Msa0687280	Msa1392700	0.806228	9.109281e-50	-8.615850e-47
Msa0687280	Msa1394310	0.800047	1.730900e-48	-8.615850e-47
Msa0687280	Msa1397120	0.804066	2.581640e-49	-8.615850e-47
Msa0687280	Msa1421990	0.805869	1.084070e-49	-8.615850e-47
Msa0687280	Msa1424640	0.807890	4.052518e-50	-8.615850e-47
Msa0687280	Msa1426570	0.801780	7.662982e-49	-8.615850e-47
Msa0687280	Msa1437130	0.807012	6.222586e-50	-8.615850e-47
Msa0687280	Msa1451620	-0.811956	5.402171e-51	-8.615850e-47
Msa0131770	Msa0687280	0.814836	1.257440e-51	-8.615850e-47
Msa0151180	Msa0687280	0.803870	2.836326e-49	-8.615850e-47
Msa0169820	Msa0687280	0.825728	4.002411e-54	-8.615850e-47
Msa0178510	Msa0687280	0.822163	2.744003e-53	-8.615850e-47
Msa0186950	Msa0687280	0.831478	1.632234e-55	-8.615850e-47
Msa0187060	Msa0687280	0.805482	1.306919e-49	-8.615850e-47
Msa0199800	Msa0687280	-0.824296	8.714318e-54	-8.615850e-47
Msa0206010	Msa0687280	0.800482	1.411770e-48	-8.615850e-47
Msa0226180	Msa0687280	0.802262	6.098459e-49	-8.615850e-47
Msa0373450	Msa0687280	0.800803	1.214445e-48	-8.615850e-47
Msa0376910	Msa0687280	0.800592	1.340568e-48	-8.615850e-47
Msa0387280	Msa0687280	0.811955	5.403878e-51	-8.615850e-47
Msa0394260	Msa0687280	0.803762	2.986163e-49	-8.615850e-47
Msa0422180	Msa0687280	0.802680	5.000653e-49	-8.615850e-47
Msa0425790	Msa0687280	0.807195	5.691183e-50	-8.615850e-47
Msa0426900	Msa0687280	0.814148	1.785908e-51	-8.615850e-47
Msa0430920	Msa0687280	0.802419	5.661156e-49	-8.615850e-47
Msa0433410	Msa0687280	-0.805969	1.032767e-49	-8.615850e-47
Msa0455760	Msa0687280	0.805129	1.549319e-49	-8.615850e-47
Msa0471900	Msa0687280	0.813934	1.990610e-51	-8.615850e-47
Msa0472960	Msa0687280	-0.807882	4.067545e-50	-8.615850e-47
Msa0240300	Msa0687280	0.801315	9.541717e-49	-8.615850e-47
Msa0244190	Msa0687280	0.805130	1.548747e-49	-8.615850e-47
Msa0265150	Msa0687280	0.805390	1.366243e-49	-8.615850e-47
Msa0319170	Msa0687280	0.827320	1.669284e-54	-8.615850e-47
Msa0322680	Msa0687280	0.807684	4.482313e-50	-8.615850e-47
Msa0326110	Msa0687280	0.802540	5.344012e-49	-8.615850e-47
Msa0350320	Msa0687280	-0.838460	2.839035e-57	-8.615850e-47
Msa0495330	Msa0687280	0.808366	3.208837e-50	-8.615850e-47
Msa0521740	Msa0687280	0.817676	2.914443e-52	-8.615850e-47
Msa0530650	Msa0687280	0.845008	5.309450e-59	-8.615850e-47
Msa0580180	Msa0687280	0.805118	1.557333e-49	-8.615850e-47
Msa0585230	Msa0687280	0.821846	3.249937e-53	-8.615850e-47
Msa0587190	Msa0687280	0.828988	6.620437e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0687280	MtrunA17_Chr4g0037621	82.692	260	28	4	1	258	1	245	1.75e-139	392

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 100 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACACAACTTTGTTGTATTTC+TGG	0.089979	4_4:+52089306	None:intergenic
CAACACGCTAATTCAAATTC+AGG	0.213903	4_4:+52089113	None:intergenic
TATGAATGATAAGGAGTTTC+AGG	0.233216	4_4:+52089148	None:intergenic
GAATTAAATCAGGTTTATAT+TGG	0.240303	4_4:+52089378	None:intergenic
GAATTCTGACACGACAAAAT+TGG	0.243690	4_4:-52087461	Msa0687280:three_prime_UTR
GATTCATACCTGGAATTATT+GGG	0.247664	4_4:+52089082	None:intergenic
GGATTCATACCTGGAATTAT+TGG	0.261018	4_4:+52089081	None:intergenic
GTGGCCGGAAATTGCCAATT+TGG	0.274884	4_4:+52088021	None:intergenic
TGAGCCAAATTGGCAATTTC+CGG	0.286882	4_4:-52088025	Msa0687280:CDS
TCAATGACGCTGACGCTAAC+TGG	0.319388	4_4:+52088753	None:intergenic
CACAACTTTGTTGTATTTCT+GGG	0.319480	4_4:+52089307	None:intergenic
GTCATTGATGGCATCGCTTA+TGG	0.330311	4_4:-52088738	Msa0687280:CDS
AGATATGTTGGACGTCTTCT+TGG	0.352253	4_4:-52087857	Msa0687280:CDS
GCATCATCGACCTTCGGAAT+TGG	0.354610	4_4:+52088699	None:intergenic
TATGTGTTGTCTCTAACTTT+AGG	0.361307	4_4:+52089458	None:intergenic
TAATGAAAATAAGAAGAAAA+AGG	0.372353	4_4:-52088481	Msa0687280:CDS
GTAGACAGTGTGAGCCAAAT+TGG	0.380599	4_4:-52088035	Msa0687280:CDS
CAAATTCAAAATGAACTTGT+TGG	0.391340	4_4:-52087731	Msa0687280:three_prime_UTR
TTTGATGGCAATTGCAGAAC+AGG	0.393940	4_4:-52088319	Msa0687280:intron
TTTAGACCAACGGAATGAAA+TGG	0.394245	4_4:-52088517	Msa0687280:CDS
CCTATTTGAGATGTGCTTGT+AGG	0.401685	4_4:+52087892	None:intergenic
TTTGAAGGAGTTATTGTAGA+TGG	0.401831	4_4:-52087558	Msa0687280:three_prime_UTR
TCTATAGAAAATGAAGCTAT+TGG	0.404032	4_4:-52088633	Msa0687280:CDS
CCTTTGAGAAGGAGGAGAAC+TGG	0.414219	4_4:-52087818	Msa0687280:exon
GGAATTACCTCCTCAGTTGC+TGG	0.415477	4_4:+52087913	None:intergenic
TAGTGCAAAAGGTGAGGTTA+AGG	0.416681	4_4:-52088550	Msa0687280:CDS
GTTGTATTTCTGGGCATGTT+TGG	0.419193	4_4:+52089316	None:intergenic
GATATGTTGGACGTCTTCTT+GGG	0.420094	4_4:-52087856	Msa0687280:CDS
ACAATAATTGCTGCATTTGA+AGG	0.420751	4_4:-52087573	Msa0687280:three_prime_UTR
TCGGCAATATGAATTAAATC+AGG	0.423846	4_4:+52089368	None:intergenic
AGTGTCTAGCGACGATGATA+TGG	0.425121	4_4:-52088358	Msa0687280:CDS
AATTGCACCCCAATAATTCC+AGG	0.429280	4_4:-52089090	Msa0687280:intron
CCTACAAGCACATCTCAAAT+AGG	0.432958	4_4:-52087892	Msa0687280:CDS
ATTAGCTTCAACAACATTGC+CGG	0.440034	4_4:+52088659	None:intergenic
TCTCAAAGGTTTCTCAGTAA+TGG	0.440318	4_4:+52087832	None:intergenic
GTTAGCGTCAGCGTCATTGA+TGG	0.440543	4_4:-52088750	Msa0687280:CDS
AACTAATTCTTTCCTTGCCA+TGG	0.444774	4_4:+52087608	None:intergenic
GGAATGAATAACTGTGTTGA+GGG	0.446298	4_4:-52088810	Msa0687280:CDS
GGATGCAAATCACCCGTTGC+TGG	0.446734	4_4:-52087440	Msa0687280:three_prime_UTR
TCTCAAGCCTCCCCAGCAAC+GGG	0.447306	4_4:+52087428	None:intergenic
CCAGTTCTCCTCCTTCTCAA+AGG	0.458672	4_4:+52087818	None:intergenic
CATCACCCATTTCATTCCGT+TGG	0.460429	4_4:+52088511	None:intergenic
GTTGACGGTTGATGATTTGA+TGG	0.465634	4_4:-52088334	Msa0687280:CDS
AACACGCTAATTCAAATTCA+GGG	0.471259	4_4:+52089114	None:intergenic
GTTCCTGCTTCAGCTGTGGC+CGG	0.472137	4_4:+52088006	None:intergenic
GATGCAAATCACCCGTTGCT+GGG	0.472537	4_4:-52087439	Msa0687280:three_prime_UTR
AGAACCACTTGTGCATGAAC+GGG	0.472765	4_4:-52089250	Msa0687280:five_prime_UTR
AGTGCAAAAGGTGAGGTTAA+GGG	0.475605	4_4:-52088549	Msa0687280:CDS
GAATTTGAATATGAATGATA+AGG	0.477276	4_4:+52089139	None:intergenic
TGGCTTGCATCATCGACCTT+CGG	0.485754	4_4:+52088693	None:intergenic
AAGTCGAATTCTAGTGCAAA+AGG	0.494931	4_4:-52088561	Msa0687280:CDS
AGTTACCATCATGGATGAAA+AGG	0.495277	4_4:-52088776	Msa0687280:CDS
TTAGACCAACGGAATGAAAT+GGG	0.495671	4_4:-52088516	Msa0687280:CDS
TGAGGAACTTTGACCAACTA+GGG	0.498314	4_4:+52087524	None:intergenic
CAAATCACCCGTTGCTGGGG+AGG	0.498357	4_4:-52087435	Msa0687280:three_prime_UTR
TTCTCAAGCCTCCCCAGCAA+CGG	0.503245	4_4:+52087427	None:intergenic
CATTGCCGGAGTCACTTTCG+TGG	0.506524	4_4:+52088673	None:intergenic
AGGCGATCAAATCGAAGGAT+GGG	0.513205	4_4:-52088461	Msa0687280:CDS
AAGAACCACTTGTGCATGAA+CGG	0.517868	4_4:-52089251	Msa0687280:five_prime_UTR
TTGAGGAACTTTGACCAACT+AGG	0.521770	4_4:+52087523	None:intergenic
CTGAGAAACCTTTGAGAAGG+AGG	0.523284	4_4:-52087826	Msa0687280:exon
CGACGATGATATGGAGTTGA+CGG	0.527405	4_4:-52088349	Msa0687280:CDS
ACCGTGAGAGTATTGTTAAG+TGG	0.533519	4_4:+52089343	None:intergenic
CGTTGTTCCTGCTTCAGCTG+TGG	0.533603	4_4:+52088002	None:intergenic
GGTTGCAATCTCACCCTAGT+TGG	0.535649	4_4:-52087537	Msa0687280:three_prime_UTR
TTTCCGGCCACAGCTGAAGC+AGG	0.538346	4_4:-52088009	Msa0687280:CDS
TTCACCCGTTCATGCACAAG+TGG	0.542453	4_4:+52089246	None:intergenic
TCATCCTGCTCAAGATATGT+TGG	0.547783	4_4:-52087869	Msa0687280:CDS
TACCTCCTCAGTTGCTGGAG+AGG	0.547924	4_4:+52087918	None:intergenic
GCAGTATGTCAAAGATTATG+AGG	0.550398	4_4:-52088082	Msa0687280:intron
CCGTGAGAGTATTGTTAAGT+GGG	0.553155	4_4:+52089344	None:intergenic
GCAAGAAGGAAACGATAAAG+AGG	0.562260	4_4:-52088584	Msa0687280:CDS
GGAATTGGCATCATGCATGA+TGG	0.562904	4_4:+52088714	None:intergenic
ACGTCCAACATATCTTGAGC+AGG	0.563117	4_4:+52087865	None:intergenic
AGAGTATTGTTAAGTGGGAT+CGG	0.564893	4_4:+52089349	None:intergenic
AGGAATGAATAACTGTGTTG+AGG	0.565426	4_4:-52088811	Msa0687280:exon
AAGGCGATCAAATCGAAGGA+TGG	0.570967	4_4:-52088462	Msa0687280:CDS
TTGTGCATGAACGGGTGAAG+AGG	0.580908	4_4:-52089242	Msa0687280:five_prime_UTR
GCAAGCCACGAAAGTGACTC+CGG	0.582998	4_4:-52088678	Msa0687280:CDS
GCTTCCCTTACCGAATTAGA+CGG	0.583689	4_4:+52087952	None:intergenic
GGCGATCAAATCGAAGGATG+GGG	0.592288	4_4:-52088460	Msa0687280:CDS
TGTGCATGAACGGGTGAAGA+GGG	0.592630	4_4:-52089241	Msa0687280:five_prime_UTR
ATTCATACCTGGAATTATTG+GGG	0.592644	4_4:+52089083	None:intergenic
TTACTGAGAAACCTTTGAGA+AGG	0.593406	4_4:-52087829	Msa0687280:exon
GAAGAAAATTGATTGCAAGA+AGG	0.594859	4_4:-52088598	Msa0687280:CDS
GAAAACGCCAGTTACCATCA+TGG	0.601249	4_4:-52088785	Msa0687280:CDS
AAAATGTACATGCCATGGCA+AGG	0.606072	4_4:-52087620	Msa0687280:three_prime_UTR
GAGTTTCAGGTCACAACACA+AGG	0.607477	4_4:+52089161	None:intergenic
ATGCAAATCACCCGTTGCTG+GGG	0.615092	4_4:-52087438	Msa0687280:three_prime_UTR
CCCACTTAACAATACTCTCA+CGG	0.616462	4_4:-52089344	Msa0687280:five_prime_UTR
ATGCATGATGCCAATTCCGA+AGG	0.620795	4_4:-52088709	Msa0687280:CDS
AATTTAGAGGATCTTAGCCA+TGG	0.622615	4_4:-52088408	Msa0687280:CDS
TAATTCCTCTCCAGCAACTG+AGG	0.627429	4_4:-52087923	Msa0687280:CDS
AATGTGAATTCAAACATGAA+CGG	0.627767	4_4:+52089424	None:intergenic
AAAACCGTCTAATTCGGTAA+GGG	0.640099	4_4:-52087956	Msa0687280:CDS
TTCCTCTCCAGCAACTGAGG+AGG	0.651343	4_4:-52087920	Msa0687280:CDS
GAATTCTAGTGCAAAAGGTG+AGG	0.665140	4_4:-52088556	Msa0687280:CDS
AAACACTTTGAAAGACAAGG+TGG	0.715155	4_4:-52087679	Msa0687280:three_prime_UTR
ATACATCATCACTACCACCA+TGG	0.727291	4_4:+52088391	None:intergenic
TTAGAGGATCTTAGCCATGG+TGG	0.730179	4_4:-52088405	Msa0687280:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATTTAACGGATTTAATT+GGG	+	chr4_4:52087839-52087858	None:intergenic	15.0%
!!!	AATAATTTAACGGATTTAAT+TGG	+	chr4_4:52087840-52087859	None:intergenic	15.0%
!!!	ATTTGGAATGAATAATTTAA+CGG	+	chr4_4:52087850-52087869	None:intergenic	15.0%
!!!	TTTTTAAAGAATTGGAAATT+TGG	+	chr4_4:52087867-52087886	None:intergenic	15.0%
!!	TAATGAAAATAAGAAGAAAA+AGG	-	chr4_4:52088320-52088339	Msa0687280:CDS	15.0%
!!	AAGCAATATTATAAATTCAA+TGG	+	chr4_4:52088625-52088644	None:intergenic	15.0%
!!!	TTTTTTCTTTTCTTTATCAA+GGG	+	chr4_4:52089105-52089124	None:intergenic	15.0%
!!!	ATAATTTAACGGATTTAATT+GGG	+	chr4_4:52087839-52087858	None:intergenic	15.0%
!!!	AATAATTTAACGGATTTAAT+TGG	+	chr4_4:52087840-52087859	None:intergenic	15.0%
!!!	ATTTGGAATGAATAATTTAA+CGG	+	chr4_4:52087850-52087869	None:intergenic	15.0%
!!!	TTTTTAAAGAATTGGAAATT+TGG	+	chr4_4:52087867-52087886	None:intergenic	15.0%
!!	TAATGAAAATAAGAAGAAAA+AGG	-	chr4_4:52088320-52088339	Msa0687280:CDS	15.0%
!!	AAGCAATATTATAAATTCAA+TGG	+	chr4_4:52088625-52088644	None:intergenic	15.0%
!!!	TTTTTTCTTTTCTTTATCAA+GGG	+	chr4_4:52089105-52089124	None:intergenic	15.0%
!!	GAATTAAATCAGGTTTATAT+TGG	+	chr4_4:52087426-52087445	None:intergenic	20.0%
!!	GAATTTGAATATGAATGATA+AGG	+	chr4_4:52087665-52087684	None:intergenic	20.0%
!!	TTTAATTGGGGTTAAAATTA+GGG	+	chr4_4:52087826-52087845	None:intergenic	20.0%
!!	ATTTAATTGGGGTTAAAATT+AGG	+	chr4_4:52087827-52087846	None:intergenic	20.0%
!!!	TAATTTAACGGATTTAATTG+GGG	+	chr4_4:52087838-52087857	None:intergenic	20.0%
!!	ATTTGATTGATGTTATCAAT+AGG	-	chr4_4:52087970-52087989	Msa0687280:CDS	20.0%
!!!	TTTTTCTTTTCTTTATCAAG+GGG	+	chr4_4:52089104-52089123	None:intergenic	20.0%
!!!	GTTTTTTCTTTTCTTTATCA+AGG	+	chr4_4:52089106-52089125	None:intergenic	20.0%
!!	GAATTAAATCAGGTTTATAT+TGG	+	chr4_4:52087426-52087445	None:intergenic	20.0%
!!	GAATTTGAATATGAATGATA+AGG	+	chr4_4:52087665-52087684	None:intergenic	20.0%
!!	TTTAATTGGGGTTAAAATTA+GGG	+	chr4_4:52087826-52087845	None:intergenic	20.0%
!!	ATTTAATTGGGGTTAAAATT+AGG	+	chr4_4:52087827-52087846	None:intergenic	20.0%
!!!	TAATTTAACGGATTTAATTG+GGG	+	chr4_4:52087838-52087857	None:intergenic	20.0%
!!	ATTTGATTGATGTTATCAAT+AGG	-	chr4_4:52087970-52087989	Msa0687280:CDS	20.0%
!!!	TTTTTCTTTTCTTTATCAAG+GGG	+	chr4_4:52089104-52089123	None:intergenic	20.0%
!!!	GTTTTTTCTTTTCTTTATCA+AGG	+	chr4_4:52089106-52089125	None:intergenic	20.0%
!	AATGTGAATTCAAACATGAA+CGG	+	chr4_4:52087380-52087399	None:intergenic	25.0%
!	AGATTGAGAAAATGGAAATT+TGG	+	chr4_4:52087744-52087763	None:intergenic	25.0%
!	TCTATAGAAAATGAAGCTAT+TGG	-	chr4_4:52088168-52088187	Msa0687280:intron	25.0%
!	GAAAAACAAATTTAGACCAA+CGG	-	chr4_4:52088274-52088293	Msa0687280:intron	25.0%
!	CAAATTCAAAATGAACTTGT+TGG	-	chr4_4:52089070-52089089	Msa0687280:intron	25.0%
!!	TTTTCTTTTCTTTATCAAGG+GGG	+	chr4_4:52089103-52089122	None:intergenic	25.0%
!!	AAAAAACACTTTGAAAGACA+AGG	-	chr4_4:52089119-52089138	Msa0687280:five_prime_UTR	25.0%
!!	CAAGTATAGCAATTTTATTG+AGG	+	chr4_4:52089298-52089317	None:intergenic	25.0%
!	AATGTGAATTCAAACATGAA+CGG	+	chr4_4:52087380-52087399	None:intergenic	25.0%
!	AGATTGAGAAAATGGAAATT+TGG	+	chr4_4:52087744-52087763	None:intergenic	25.0%
!	TCTATAGAAAATGAAGCTAT+TGG	-	chr4_4:52088168-52088187	Msa0687280:intron	25.0%
!	GAAAAACAAATTTAGACCAA+CGG	-	chr4_4:52088274-52088293	Msa0687280:intron	25.0%
!	CAAATTCAAAATGAACTTGT+TGG	-	chr4_4:52089070-52089089	Msa0687280:intron	25.0%
!!	TTTTCTTTTCTTTATCAAGG+GGG	+	chr4_4:52089103-52089122	None:intergenic	25.0%
!!	AAAAAACACTTTGAAAGACA+AGG	-	chr4_4:52089119-52089138	Msa0687280:five_prime_UTR	25.0%
!!	CAAGTATAGCAATTTTATTG+AGG	+	chr4_4:52089298-52089317	None:intergenic	25.0%
	TCGGCAATATGAATTAAATC+AGG	+	chr4_4:52087436-52087455	None:intergenic	30.0%
!	CACAACTTTGTTGTATTTCT+GGG	+	chr4_4:52087497-52087516	None:intergenic	30.0%
!	ACACAACTTTGTTGTATTTC+TGG	+	chr4_4:52087498-52087517	None:intergenic	30.0%
!!!	AAGTGGTTCTTTTTTTTGAG+AGG	+	chr4_4:52087541-52087560	None:intergenic	30.0%
	TATGAATGATAAGGAGTTTC+AGG	+	chr4_4:52087656-52087675	None:intergenic	30.0%
	AACACGCTAATTCAAATTCA+GGG	+	chr4_4:52087690-52087709	None:intergenic	30.0%
	ATTCATACCTGGAATTATTG+GGG	+	chr4_4:52087721-52087740	None:intergenic	30.0%
	GATTCATACCTGGAATTATT+GGG	+	chr4_4:52087722-52087741	None:intergenic	30.0%
	GCATAAAGAGATTGAGAAAA+TGG	+	chr4_4:52087752-52087771	None:intergenic	30.0%
	TTAAGAGAAGAGGGTTAAAT+TGG	+	chr4_4:52087802-52087821	None:intergenic	30.0%
	AATTAGGGTTTAAGAGAAGA+GGG	+	chr4_4:52087811-52087830	None:intergenic	30.0%
	AAATTAGGGTTTAAGAGAAG+AGG	+	chr4_4:52087812-52087831	None:intergenic	30.0%
!	GCAATCAATTTTCTTCACAT+TGG	+	chr4_4:52088199-52088218	None:intergenic	30.0%
	GAAGAAAATTGATTGCAAGA+AGG	-	chr4_4:52088203-52088222	Msa0687280:intron	30.0%
	AAAAAAACGCGGAAATTTAG+AGG	-	chr4_4:52088380-52088399	Msa0687280:CDS	30.0%
	AAACAAAGTAAAAGCTACCA+CGG	+	chr4_4:52088545-52088564	None:intergenic	30.0%
	AAATTGTTCAAGCGGTTATA+GGG	+	chr4_4:52088687-52088706	None:intergenic	30.0%
	AAAATTGTTCAAGCGGTTAT+AGG	+	chr4_4:52088688-52088707	None:intergenic	30.0%
	ATACGACAAAATTGTTCAAG+CGG	+	chr4_4:52088695-52088714	None:intergenic	30.0%
	GAACAAAAAACCGTCTAATT+CGG	-	chr4_4:52088839-52088858	Msa0687280:intron	30.0%
	TAACAAAAATGTACATGCCA+TGG	-	chr4_4:52089176-52089195	Msa0687280:five_prime_UTR	30.0%
	ACAATAATTGCTGCATTTGA+AGG	-	chr4_4:52089228-52089247	Msa0687280:five_prime_UTR	30.0%
	TTTGAAGGAGTTATTGTAGA+TGG	-	chr4_4:52089243-52089262	Msa0687280:five_prime_UTR	30.0%
!	ATCTTTTACACAACAATGGT+GGG	-	chr4_4:52089402-52089421	Msa0687280:five_prime_UTR	30.0%
	TCGGCAATATGAATTAAATC+AGG	+	chr4_4:52087436-52087455	None:intergenic	30.0%
!	CACAACTTTGTTGTATTTCT+GGG	+	chr4_4:52087497-52087516	None:intergenic	30.0%
!	ACACAACTTTGTTGTATTTC+TGG	+	chr4_4:52087498-52087517	None:intergenic	30.0%
!!!	AAGTGGTTCTTTTTTTTGAG+AGG	+	chr4_4:52087541-52087560	None:intergenic	30.0%
	TATGAATGATAAGGAGTTTC+AGG	+	chr4_4:52087656-52087675	None:intergenic	30.0%
	AACACGCTAATTCAAATTCA+GGG	+	chr4_4:52087690-52087709	None:intergenic	30.0%
	ATTCATACCTGGAATTATTG+GGG	+	chr4_4:52087721-52087740	None:intergenic	30.0%
	GATTCATACCTGGAATTATT+GGG	+	chr4_4:52087722-52087741	None:intergenic	30.0%
	GCATAAAGAGATTGAGAAAA+TGG	+	chr4_4:52087752-52087771	None:intergenic	30.0%
	TTAAGAGAAGAGGGTTAAAT+TGG	+	chr4_4:52087802-52087821	None:intergenic	30.0%
	AATTAGGGTTTAAGAGAAGA+GGG	+	chr4_4:52087811-52087830	None:intergenic	30.0%
	AAATTAGGGTTTAAGAGAAG+AGG	+	chr4_4:52087812-52087831	None:intergenic	30.0%
!	GCAATCAATTTTCTTCACAT+TGG	+	chr4_4:52088199-52088218	None:intergenic	30.0%
	GAAGAAAATTGATTGCAAGA+AGG	-	chr4_4:52088203-52088222	Msa0687280:intron	30.0%
	AAAAAAACGCGGAAATTTAG+AGG	-	chr4_4:52088380-52088399	Msa0687280:CDS	30.0%
	AAACAAAGTAAAAGCTACCA+CGG	+	chr4_4:52088545-52088564	None:intergenic	30.0%
	AAATTGTTCAAGCGGTTATA+GGG	+	chr4_4:52088687-52088706	None:intergenic	30.0%
	AAAATTGTTCAAGCGGTTAT+AGG	+	chr4_4:52088688-52088707	None:intergenic	30.0%
	ATACGACAAAATTGTTCAAG+CGG	+	chr4_4:52088695-52088714	None:intergenic	30.0%
	GAACAAAAAACCGTCTAATT+CGG	-	chr4_4:52088839-52088858	Msa0687280:intron	30.0%
	TAACAAAAATGTACATGCCA+TGG	-	chr4_4:52089176-52089195	Msa0687280:five_prime_UTR	30.0%
	ACAATAATTGCTGCATTTGA+AGG	-	chr4_4:52089228-52089247	Msa0687280:five_prime_UTR	30.0%
	TTTGAAGGAGTTATTGTAGA+TGG	-	chr4_4:52089243-52089262	Msa0687280:five_prime_UTR	30.0%
!	ATCTTTTACACAACAATGGT+GGG	-	chr4_4:52089402-52089421	Msa0687280:five_prime_UTR	30.0%
!!	AGAGTATTGTTAAGTGGGAT+CGG	+	chr4_4:52087455-52087474	None:intergenic	35.0%
	CAACACGCTAATTCAAATTC+AGG	+	chr4_4:52087691-52087710	None:intergenic	35.0%
	GGATTCATACCTGGAATTAT+TGG	+	chr4_4:52087723-52087742	None:intergenic	35.0%
	TGGAAATTTGGATTCATACC+TGG	+	chr4_4:52087732-52087751	None:intergenic	35.0%
	AGTTAAGTTACACTCTCAAG+TGG	+	chr4_4:52087947-52087966	None:intergenic	35.0%
	AGGAATGAATAACTGTGTTG+AGG	-	chr4_4:52087990-52088009	Msa0687280:CDS	35.0%
	GGAATGAATAACTGTGTTGA+GGG	-	chr4_4:52087991-52088010	Msa0687280:CDS	35.0%
!	TTTTCATCCATGATGGTAAC+TGG	+	chr4_4:52088026-52088045	None:intergenic	35.0%
	AGTTACCATCATGGATGAAA+AGG	-	chr4_4:52088025-52088044	Msa0687280:CDS	35.0%
!	ATTAGCTTCAACAACATTGC+CGG	+	chr4_4:52088145-52088164	None:intergenic	35.0%
	AAGTCGAATTCTAGTGCAAA+AGG	-	chr4_4:52088240-52088259	Msa0687280:intron	35.0%
	TTTAGACCAACGGAATGAAA+TGG	-	chr4_4:52088284-52088303	Msa0687280:intron	35.0%
	TTAGACCAACGGAATGAAAT+GGG	-	chr4_4:52088285-52088304	Msa0687280:intron	35.0%
!!!	CGTTTTTTTGTAGAACGTCT+AGG	+	chr4_4:52088369-52088388	None:intergenic	35.0%
	AGACGTTCTACAAAAAAACG+CGG	-	chr4_4:52088369-52088388	Msa0687280:CDS	35.0%
	AATTTAGAGGATCTTAGCCA+TGG	-	chr4_4:52088393-52088412	Msa0687280:CDS	35.0%
	AATATTGCTTCCCAAGACAA+TGG	-	chr4_4:52088635-52088654	Msa0687280:CDS	35.0%
	ATCACATCAACCATTGTCTT+GGG	+	chr4_4:52088648-52088667	None:intergenic	35.0%
	GCAGTATGTCAAAGATTATG+AGG	-	chr4_4:52088719-52088738	Msa0687280:CDS	35.0%
	AAAAACCGTCTAATTCGGTA+AGG	-	chr4_4:52088844-52088863	Msa0687280:intron	35.0%
	AAAACCGTCTAATTCGGTAA+GGG	-	chr4_4:52088845-52088864	Msa0687280:intron	35.0%
	TCTCAAAGGTTTCTCAGTAA+TGG	+	chr4_4:52088972-52088991	None:intergenic	35.0%
!	TTACTGAGAAACCTTTGAGA+AGG	-	chr4_4:52088972-52088991	Msa0687280:intron	35.0%
!	AAACACTTTGAAAGACAAGG+TGG	-	chr4_4:52089122-52089141	Msa0687280:five_prime_UTR	35.0%
	AACTAATTCTTTCCTTGCCA+TGG	+	chr4_4:52089196-52089215	None:intergenic	35.0%
	GAATTCTGACACGACAAAAT+TGG	-	chr4_4:52089340-52089359	Msa0687280:five_prime_UTR	35.0%
!	GCTCATCTTTTACACAACAA+TGG	-	chr4_4:52089398-52089417	Msa0687280:five_prime_UTR	35.0%
!	CATCTTTTACACAACAATGG+TGG	-	chr4_4:52089401-52089420	Msa0687280:five_prime_UTR	35.0%
!	TCTTTTACACAACAATGGTG+GGG	-	chr4_4:52089403-52089422	Msa0687280:five_prime_UTR	35.0%
!!	AGAGTATTGTTAAGTGGGAT+CGG	+	chr4_4:52087455-52087474	None:intergenic	35.0%
	CAACACGCTAATTCAAATTC+AGG	+	chr4_4:52087691-52087710	None:intergenic	35.0%
	GGATTCATACCTGGAATTAT+TGG	+	chr4_4:52087723-52087742	None:intergenic	35.0%
	TGGAAATTTGGATTCATACC+TGG	+	chr4_4:52087732-52087751	None:intergenic	35.0%
	AGTTAAGTTACACTCTCAAG+TGG	+	chr4_4:52087947-52087966	None:intergenic	35.0%
	AGGAATGAATAACTGTGTTG+AGG	-	chr4_4:52087990-52088009	Msa0687280:CDS	35.0%
	GGAATGAATAACTGTGTTGA+GGG	-	chr4_4:52087991-52088010	Msa0687280:CDS	35.0%
!	TTTTCATCCATGATGGTAAC+TGG	+	chr4_4:52088026-52088045	None:intergenic	35.0%
	AGTTACCATCATGGATGAAA+AGG	-	chr4_4:52088025-52088044	Msa0687280:CDS	35.0%
!	ATTAGCTTCAACAACATTGC+CGG	+	chr4_4:52088145-52088164	None:intergenic	35.0%
	AAGTCGAATTCTAGTGCAAA+AGG	-	chr4_4:52088240-52088259	Msa0687280:intron	35.0%
	TTTAGACCAACGGAATGAAA+TGG	-	chr4_4:52088284-52088303	Msa0687280:intron	35.0%
	TTAGACCAACGGAATGAAAT+GGG	-	chr4_4:52088285-52088304	Msa0687280:intron	35.0%
!!!	CGTTTTTTTGTAGAACGTCT+AGG	+	chr4_4:52088369-52088388	None:intergenic	35.0%
	AGACGTTCTACAAAAAAACG+CGG	-	chr4_4:52088369-52088388	Msa0687280:CDS	35.0%
	AATTTAGAGGATCTTAGCCA+TGG	-	chr4_4:52088393-52088412	Msa0687280:CDS	35.0%
	AATATTGCTTCCCAAGACAA+TGG	-	chr4_4:52088635-52088654	Msa0687280:CDS	35.0%
	ATCACATCAACCATTGTCTT+GGG	+	chr4_4:52088648-52088667	None:intergenic	35.0%
	GCAGTATGTCAAAGATTATG+AGG	-	chr4_4:52088719-52088738	Msa0687280:CDS	35.0%
	AAAAACCGTCTAATTCGGTA+AGG	-	chr4_4:52088844-52088863	Msa0687280:intron	35.0%
	AAAACCGTCTAATTCGGTAA+GGG	-	chr4_4:52088845-52088864	Msa0687280:intron	35.0%
	TCTCAAAGGTTTCTCAGTAA+TGG	+	chr4_4:52088972-52088991	None:intergenic	35.0%
!	TTACTGAGAAACCTTTGAGA+AGG	-	chr4_4:52088972-52088991	Msa0687280:intron	35.0%
!	AAACACTTTGAAAGACAAGG+TGG	-	chr4_4:52089122-52089141	Msa0687280:five_prime_UTR	35.0%
	AACTAATTCTTTCCTTGCCA+TGG	+	chr4_4:52089196-52089215	None:intergenic	35.0%
	GAATTCTGACACGACAAAAT+TGG	-	chr4_4:52089340-52089359	Msa0687280:five_prime_UTR	35.0%
!	GCTCATCTTTTACACAACAA+TGG	-	chr4_4:52089398-52089417	Msa0687280:five_prime_UTR	35.0%
!	CATCTTTTACACAACAATGG+TGG	-	chr4_4:52089401-52089420	Msa0687280:five_prime_UTR	35.0%
!	TCTTTTACACAACAATGGTG+GGG	-	chr4_4:52089403-52089422	Msa0687280:five_prime_UTR	35.0%
!!	CCGTGAGAGTATTGTTAAGT+GGG	+	chr4_4:52087460-52087479	None:intergenic	40.0%
	CCCACTTAACAATACTCTCA+CGG	-	chr4_4:52087457-52087476	Msa0687280:three_prime_UTR	40.0%
!!	ACCGTGAGAGTATTGTTAAG+TGG	+	chr4_4:52087461-52087480	None:intergenic	40.0%
!!	GTTGTATTTCTGGGCATGTT+TGG	+	chr4_4:52087488-52087507	None:intergenic	40.0%
	AAGAACCACTTGTGCATGAA+CGG	-	chr4_4:52087550-52087569	Msa0687280:three_prime_UTR	40.0%
	AATTGCACCCCAATAATTCC+AGG	-	chr4_4:52087711-52087730	Msa0687280:three_prime_UTR	40.0%
	GCAAGAAGGAAACGATAAAG+AGG	-	chr4_4:52088217-52088236	Msa0687280:intron	40.0%
	GAATTCTAGTGCAAAAGGTG+AGG	-	chr4_4:52088245-52088264	Msa0687280:intron	40.0%
	TAGTGCAAAAGGTGAGGTTA+AGG	-	chr4_4:52088251-52088270	Msa0687280:intron	40.0%
	AGTGCAAAAGGTGAGGTTAA+GGG	-	chr4_4:52088252-52088271	Msa0687280:intron	40.0%
	GAAAAAGGCGATCAAATCGA+AGG	-	chr4_4:52088335-52088354	Msa0687280:CDS	40.0%
	ATACATCATCACTACCACCA+TGG	+	chr4_4:52088413-52088432	None:intergenic	40.0%
!!	GTTGACGGTTGATGATTTGA+TGG	-	chr4_4:52088467-52088486	Msa0687280:CDS	40.0%
!	TTTGATGGCAATTGCAGAAC+AGG	-	chr4_4:52088482-52088501	Msa0687280:CDS	40.0%
	CATCACATCAACCATTGTCT+TGG	+	chr4_4:52088649-52088668	None:intergenic	40.0%
!	CAAGACAATGGTTGATGTGA+TGG	-	chr4_4:52088647-52088666	Msa0687280:CDS	40.0%
	TGAGCCAAATTGGCAATTTC+CGG	-	chr4_4:52088776-52088795	Msa0687280:CDS	40.0%
!!!	CGGTTTTTTGTTCTCACGAA+AGG	+	chr4_4:52088832-52088851	None:intergenic	40.0%
!	CCTATTTGAGATGTGCTTGT+AGG	+	chr4_4:52088912-52088931	None:intergenic	40.0%
	CCTACAAGCACATCTCAAAT+AGG	-	chr4_4:52088909-52088928	Msa0687280:intron	40.0%
	TCATCCTGCTCAAGATATGT+TGG	-	chr4_4:52088932-52088951	Msa0687280:intron	40.0%
	AGATATGTTGGACGTCTTCT+TGG	-	chr4_4:52088944-52088963	Msa0687280:intron	40.0%
	GATATGTTGGACGTCTTCTT+GGG	-	chr4_4:52088945-52088964	Msa0687280:intron	40.0%
	AAAATGTACATGCCATGGCA+AGG	-	chr4_4:52089181-52089200	Msa0687280:five_prime_UTR	40.0%
	TGAGGAACTTTGACCAACTA+GGG	+	chr4_4:52089280-52089299	None:intergenic	40.0%
	TTGAGGAACTTTGACCAACT+AGG	+	chr4_4:52089281-52089300	None:intergenic	40.0%
!!	CCGTGAGAGTATTGTTAAGT+GGG	+	chr4_4:52087460-52087479	None:intergenic	40.0%
	CCCACTTAACAATACTCTCA+CGG	-	chr4_4:52087457-52087476	Msa0687280:three_prime_UTR	40.0%
!!	ACCGTGAGAGTATTGTTAAG+TGG	+	chr4_4:52087461-52087480	None:intergenic	40.0%
!!	GTTGTATTTCTGGGCATGTT+TGG	+	chr4_4:52087488-52087507	None:intergenic	40.0%
	AAGAACCACTTGTGCATGAA+CGG	-	chr4_4:52087550-52087569	Msa0687280:three_prime_UTR	40.0%
	AATTGCACCCCAATAATTCC+AGG	-	chr4_4:52087711-52087730	Msa0687280:three_prime_UTR	40.0%
	GCAAGAAGGAAACGATAAAG+AGG	-	chr4_4:52088217-52088236	Msa0687280:intron	40.0%
	GAATTCTAGTGCAAAAGGTG+AGG	-	chr4_4:52088245-52088264	Msa0687280:intron	40.0%
	TAGTGCAAAAGGTGAGGTTA+AGG	-	chr4_4:52088251-52088270	Msa0687280:intron	40.0%
	AGTGCAAAAGGTGAGGTTAA+GGG	-	chr4_4:52088252-52088271	Msa0687280:intron	40.0%
	GAAAAAGGCGATCAAATCGA+AGG	-	chr4_4:52088335-52088354	Msa0687280:CDS	40.0%
	ATACATCATCACTACCACCA+TGG	+	chr4_4:52088413-52088432	None:intergenic	40.0%
!!	GTTGACGGTTGATGATTTGA+TGG	-	chr4_4:52088467-52088486	Msa0687280:CDS	40.0%
!	TTTGATGGCAATTGCAGAAC+AGG	-	chr4_4:52088482-52088501	Msa0687280:CDS	40.0%
	CATCACATCAACCATTGTCT+TGG	+	chr4_4:52088649-52088668	None:intergenic	40.0%
!	CAAGACAATGGTTGATGTGA+TGG	-	chr4_4:52088647-52088666	Msa0687280:CDS	40.0%
	TGAGCCAAATTGGCAATTTC+CGG	-	chr4_4:52088776-52088795	Msa0687280:CDS	40.0%
!!!	CGGTTTTTTGTTCTCACGAA+AGG	+	chr4_4:52088832-52088851	None:intergenic	40.0%
!	CCTATTTGAGATGTGCTTGT+AGG	+	chr4_4:52088912-52088931	None:intergenic	40.0%
	CCTACAAGCACATCTCAAAT+AGG	-	chr4_4:52088909-52088928	Msa0687280:intron	40.0%
	TCATCCTGCTCAAGATATGT+TGG	-	chr4_4:52088932-52088951	Msa0687280:intron	40.0%
	AGATATGTTGGACGTCTTCT+TGG	-	chr4_4:52088944-52088963	Msa0687280:intron	40.0%
	GATATGTTGGACGTCTTCTT+GGG	-	chr4_4:52088945-52088964	Msa0687280:intron	40.0%
	AAAATGTACATGCCATGGCA+AGG	-	chr4_4:52089181-52089200	Msa0687280:five_prime_UTR	40.0%
	TGAGGAACTTTGACCAACTA+GGG	+	chr4_4:52089280-52089299	None:intergenic	40.0%
	TTGAGGAACTTTGACCAACT+AGG	+	chr4_4:52089281-52089300	None:intergenic	40.0%
	AGAACCACTTGTGCATGAAC+GGG	-	chr4_4:52087551-52087570	Msa0687280:three_prime_UTR	45.0%
!	GAGTTTCAGGTCACAACACA+AGG	+	chr4_4:52087643-52087662	None:intergenic	45.0%
	GAAAACGCCAGTTACCATCA+TGG	-	chr4_4:52088016-52088035	Msa0687280:CDS	45.0%
!!!	ACTGGCCTTTTCATCCATGA+TGG	+	chr4_4:52088033-52088052	None:intergenic	45.0%
!	GTCATTGATGGCATCGCTTA+TGG	-	chr4_4:52088063-52088082	Msa0687280:CDS	45.0%
	GGAATTGGCATCATGCATGA+TGG	+	chr4_4:52088090-52088109	None:intergenic	45.0%
	ATGCATGATGCCAATTCCGA+AGG	-	chr4_4:52088092-52088111	Msa0687280:intron	45.0%
	CATCACCCATTTCATTCCGT+TGG	+	chr4_4:52088293-52088312	None:intergenic	45.0%
	AAGGCGATCAAATCGAAGGA+TGG	-	chr4_4:52088339-52088358	Msa0687280:CDS	45.0%
	AGGCGATCAAATCGAAGGAT+GGG	-	chr4_4:52088340-52088359	Msa0687280:CDS	45.0%
	TTAGAGGATCTTAGCCATGG+TGG	-	chr4_4:52088396-52088415	Msa0687280:CDS	45.0%
	AGTGTCTAGCGACGATGATA+TGG	-	chr4_4:52088443-52088462	Msa0687280:CDS	45.0%
	CGACGATGATATGGAGTTGA+CGG	-	chr4_4:52088452-52088471	Msa0687280:CDS	45.0%
	GCTGATAATTCAAGCATCCG+TGG	-	chr4_4:52088525-52088544	Msa0687280:CDS	45.0%
	GTAGACAGTGTGAGCCAAAT+TGG	-	chr4_4:52088766-52088785	Msa0687280:CDS	45.0%
	GCTTCCCTTACCGAATTAGA+CGG	+	chr4_4:52088852-52088871	None:intergenic	45.0%
	TAATTCCTCTCCAGCAACTG+AGG	-	chr4_4:52088878-52088897	Msa0687280:intron	45.0%
	ACGTCCAACATATCTTGAGC+AGG	+	chr4_4:52088939-52088958	None:intergenic	45.0%
!	CTGAGAAACCTTTGAGAAGG+AGG	-	chr4_4:52088975-52088994	Msa0687280:intron	45.0%
	AGAACCACTTGTGCATGAAC+GGG	-	chr4_4:52087551-52087570	Msa0687280:three_prime_UTR	45.0%
!	GAGTTTCAGGTCACAACACA+AGG	+	chr4_4:52087643-52087662	None:intergenic	45.0%
	GAAAACGCCAGTTACCATCA+TGG	-	chr4_4:52088016-52088035	Msa0687280:CDS	45.0%
!!!	ACTGGCCTTTTCATCCATGA+TGG	+	chr4_4:52088033-52088052	None:intergenic	45.0%
!	GTCATTGATGGCATCGCTTA+TGG	-	chr4_4:52088063-52088082	Msa0687280:CDS	45.0%
	GGAATTGGCATCATGCATGA+TGG	+	chr4_4:52088090-52088109	None:intergenic	45.0%
	ATGCATGATGCCAATTCCGA+AGG	-	chr4_4:52088092-52088111	Msa0687280:intron	45.0%
	CATCACCCATTTCATTCCGT+TGG	+	chr4_4:52088293-52088312	None:intergenic	45.0%
	AAGGCGATCAAATCGAAGGA+TGG	-	chr4_4:52088339-52088358	Msa0687280:CDS	45.0%
	AGGCGATCAAATCGAAGGAT+GGG	-	chr4_4:52088340-52088359	Msa0687280:CDS	45.0%
	TTAGAGGATCTTAGCCATGG+TGG	-	chr4_4:52088396-52088415	Msa0687280:CDS	45.0%
	AGTGTCTAGCGACGATGATA+TGG	-	chr4_4:52088443-52088462	Msa0687280:CDS	45.0%
	CGACGATGATATGGAGTTGA+CGG	-	chr4_4:52088452-52088471	Msa0687280:CDS	45.0%
	GCTGATAATTCAAGCATCCG+TGG	-	chr4_4:52088525-52088544	Msa0687280:CDS	45.0%
	GTAGACAGTGTGAGCCAAAT+TGG	-	chr4_4:52088766-52088785	Msa0687280:CDS	45.0%
	GCTTCCCTTACCGAATTAGA+CGG	+	chr4_4:52088852-52088871	None:intergenic	45.0%
	TAATTCCTCTCCAGCAACTG+AGG	-	chr4_4:52088878-52088897	Msa0687280:intron	45.0%
	ACGTCCAACATATCTTGAGC+AGG	+	chr4_4:52088939-52088958	None:intergenic	45.0%
!	CTGAGAAACCTTTGAGAAGG+AGG	-	chr4_4:52088975-52088994	Msa0687280:intron	45.0%
!!!	TTTTTTTATTTTTAAAGAAT+TGG	+	chr4_4:52087875-52087894	None:intergenic	5.0%
!!!	TTTTTTTATTTTTAAAGAAT+TGG	+	chr4_4:52087875-52087894	None:intergenic	5.0%
	TTCACCCGTTCATGCACAAG+TGG	+	chr4_4:52087558-52087577	None:intergenic	50.0%
	TTGTGCATGAACGGGTGAAG+AGG	-	chr4_4:52087559-52087578	Msa0687280:three_prime_UTR	50.0%
	TGTGCATGAACGGGTGAAGA+GGG	-	chr4_4:52087560-52087579	Msa0687280:three_prime_UTR	50.0%
	TCAATGACGCTGACGCTAAC+TGG	+	chr4_4:52088051-52088070	None:intergenic	50.0%
	GTTAGCGTCAGCGTCATTGA+TGG	-	chr4_4:52088051-52088070	Msa0687280:CDS	50.0%
	GCATCATCGACCTTCGGAAT+TGG	+	chr4_4:52088105-52088124	None:intergenic	50.0%
!	TGGCTTGCATCATCGACCTT+CGG	+	chr4_4:52088111-52088130	None:intergenic	50.0%
	GGCGATCAAATCGAAGGATG+GGG	-	chr4_4:52088341-52088360	Msa0687280:CDS	50.0%
	GTGGCCGGAAATTGCCAATT+TGG	+	chr4_4:52088783-52088802	None:intergenic	50.0%
	GGAATTACCTCCTCAGTTGC+TGG	+	chr4_4:52088891-52088910	None:intergenic	50.0%
	CCAGTTCTCCTCCTTCTCAA+AGG	+	chr4_4:52088986-52089005	None:intergenic	50.0%
!	CCTTTGAGAAGGAGGAGAAC+TGG	-	chr4_4:52088983-52089002	Msa0687280:intron	50.0%
	GGTTGCAATCTCACCCTAGT+TGG	-	chr4_4:52089264-52089283	Msa0687280:five_prime_UTR	50.0%
	GATGCAAATCACCCGTTGCT+GGG	-	chr4_4:52089362-52089381	Msa0687280:five_prime_UTR	50.0%
	ATGCAAATCACCCGTTGCTG+GGG	-	chr4_4:52089363-52089382	Msa0687280:five_prime_UTR	50.0%
	TTCACCCGTTCATGCACAAG+TGG	+	chr4_4:52087558-52087577	None:intergenic	50.0%
	TTGTGCATGAACGGGTGAAG+AGG	-	chr4_4:52087559-52087578	Msa0687280:three_prime_UTR	50.0%
	TGTGCATGAACGGGTGAAGA+GGG	-	chr4_4:52087560-52087579	Msa0687280:three_prime_UTR	50.0%
	TCAATGACGCTGACGCTAAC+TGG	+	chr4_4:52088051-52088070	None:intergenic	50.0%
	GTTAGCGTCAGCGTCATTGA+TGG	-	chr4_4:52088051-52088070	Msa0687280:CDS	50.0%
	GCATCATCGACCTTCGGAAT+TGG	+	chr4_4:52088105-52088124	None:intergenic	50.0%
!	TGGCTTGCATCATCGACCTT+CGG	+	chr4_4:52088111-52088130	None:intergenic	50.0%
	GGCGATCAAATCGAAGGATG+GGG	-	chr4_4:52088341-52088360	Msa0687280:CDS	50.0%
	GTGGCCGGAAATTGCCAATT+TGG	+	chr4_4:52088783-52088802	None:intergenic	50.0%
	GGAATTACCTCCTCAGTTGC+TGG	+	chr4_4:52088891-52088910	None:intergenic	50.0%
	CCAGTTCTCCTCCTTCTCAA+AGG	+	chr4_4:52088986-52089005	None:intergenic	50.0%
!	CCTTTGAGAAGGAGGAGAAC+TGG	-	chr4_4:52088983-52089002	Msa0687280:intron	50.0%
	GGTTGCAATCTCACCCTAGT+TGG	-	chr4_4:52089264-52089283	Msa0687280:five_prime_UTR	50.0%
	GATGCAAATCACCCGTTGCT+GGG	-	chr4_4:52089362-52089381	Msa0687280:five_prime_UTR	50.0%
	ATGCAAATCACCCGTTGCTG+GGG	-	chr4_4:52089363-52089382	Msa0687280:five_prime_UTR	50.0%
	GCAAGCCACGAAAGTGACTC+CGG	-	chr4_4:52088123-52088142	Msa0687280:intron	55.0%
!	CATTGCCGGAGTCACTTTCG+TGG	+	chr4_4:52088131-52088150	None:intergenic	55.0%
	CGTTGTTCCTGCTTCAGCTG+TGG	+	chr4_4:52088802-52088821	None:intergenic	55.0%
	TTCCTCTCCAGCAACTGAGG+AGG	-	chr4_4:52088881-52088900	Msa0687280:intron	55.0%
	TACCTCCTCAGTTGCTGGAG+AGG	+	chr4_4:52088886-52088905	None:intergenic	55.0%
	GGATGCAAATCACCCGTTGC+TGG	-	chr4_4:52089361-52089380	Msa0687280:five_prime_UTR	55.0%
	TTCTCAAGCCTCCCCAGCAA+CGG	+	chr4_4:52089377-52089396	None:intergenic	55.0%
	GCAAGCCACGAAAGTGACTC+CGG	-	chr4_4:52088123-52088142	Msa0687280:intron	55.0%
!	CATTGCCGGAGTCACTTTCG+TGG	+	chr4_4:52088131-52088150	None:intergenic	55.0%
	CGTTGTTCCTGCTTCAGCTG+TGG	+	chr4_4:52088802-52088821	None:intergenic	55.0%
	TTCCTCTCCAGCAACTGAGG+AGG	-	chr4_4:52088881-52088900	Msa0687280:intron	55.0%
	TACCTCCTCAGTTGCTGGAG+AGG	+	chr4_4:52088886-52088905	None:intergenic	55.0%
	GGATGCAAATCACCCGTTGC+TGG	-	chr4_4:52089361-52089380	Msa0687280:five_prime_UTR	55.0%
	TTCTCAAGCCTCCCCAGCAA+CGG	+	chr4_4:52089377-52089396	None:intergenic	55.0%
	TTTCCGGCCACAGCTGAAGC+AGG	-	chr4_4:52088792-52088811	Msa0687280:CDS	60.0%
	GTTCCTGCTTCAGCTGTGGC+CGG	+	chr4_4:52088798-52088817	None:intergenic	60.0%
	CAAATCACCCGTTGCTGGGG+AGG	-	chr4_4:52089366-52089385	Msa0687280:five_prime_UTR	60.0%
	TCTCAAGCCTCCCCAGCAAC+GGG	+	chr4_4:52089376-52089395	None:intergenic	60.0%
	TTTCCGGCCACAGCTGAAGC+AGG	-	chr4_4:52088792-52088811	Msa0687280:CDS	60.0%
	GTTCCTGCTTCAGCTGTGGC+CGG	+	chr4_4:52088798-52088817	None:intergenic	60.0%
	CAAATCACCCGTTGCTGGGG+AGG	-	chr4_4:52089366-52089385	Msa0687280:five_prime_UTR	60.0%
	TCTCAAGCCTCCCCAGCAAC+GGG	+	chr4_4:52089376-52089395	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	52087345	52089478	52087345	ID=Msa0687280;Name=Msa0687280
chr4_4	mRNA	52087345	52089478	52087345	ID=Msa0687280-mRNA-1;Parent=Msa0687280;Name=Msa0687280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=390\|1\|1\|1\|0.5\|0.33\|3\|489\|258
chr4_4	exon	52087345	52088100	52087345	ID=Msa0687280-mRNA-1:exon:13522;Parent=Msa0687280-mRNA-1
chr4_4	exon	52088320	52088831	52088320	ID=Msa0687280-mRNA-1:exon:13521;Parent=Msa0687280-mRNA-1
chr4_4	exon	52089091	52089478	52089091	ID=Msa0687280-mRNA-1:exon:13520;Parent=Msa0687280-mRNA-1
chr4_4	five_prime_UTR	52089091	52089478	52089091	ID=Msa0687280-mRNA-1:five_prime_utr;Parent=Msa0687280-mRNA-1
chr4_4	five_prime_UTR	52088830	52088831	52088830	ID=Msa0687280-mRNA-1:five_prime_utr;Parent=Msa0687280-mRNA-1
chr4_4	CDS	52088320	52088829	52088320	ID=Msa0687280-mRNA-1:cds;Parent=Msa0687280-mRNA-1
chr4_4	CDS	52087834	52088100	52087834	ID=Msa0687280-mRNA-1:cds;Parent=Msa0687280-mRNA-1
chr4_4	three_prime_UTR	52087345	52087833	52087345	ID=Msa0687280-mRNA-1:three_prime_utr;Parent=Msa0687280-mRNA-1

Gene Sequence

>Msa0687280

ATGAATAACTGTGTTGAGGGAAGAAAACGCCAGTTACCATCATGGATGAAAAGGCCAGTTAGCGTCAGCGTCATTGATGGCATCGCTTATGGTCCATCATGCATGATGCCAATTCCGAAGGTCGATGATGCAAGCCACGAAAGTGACTCCGGCAATGTTGTTGAAGCTAATCACTCTATAGAAAATGAAGCTATTGGTGCAGCCAATGTGAAGAAAATTGATTGCAAGAAGGAAACGATAAAGAGGAAGTCGAATTCTAGTGCAAAAGGTGAGGTTAAGGGAAAAACAAATTTAGACCAACGGAATGAAATGGGTGATGATGATGCTAATGAAAATAAGAAGAAAAAGGCGATCAAATCGAAGGATGGGGCTCCTAGACGTTCTACAAAAAAACGCGGAAATTTAGAGGATCTTAGCCATGGTGGTAGTGATGATGTATGTCTAGTTCAAGTGTCTAGCGACGATGATATGGAGTTGACGGTTGATGATTTGATGGCAATTGCAGAACAGTATGTCAAAGATTATGAGGAGAAAGAGCTGCAAGAAACGTCAAGTAGACAGTGTGAGCCAAATTGGCAATTTCCGGCCACAGCTGAAGCAGGAACAACGCTTGATTCCTTTCGTGAGAACAAAAAACCGTCTAATTCGGTAAGGGAAGCTTTATATAATTCCTCTCCAGCAACTGAGGAGGTAATTCCTACAAGCACATCTCAAATAGGTCATCCTGCTCAAGATATGTTGGACGTCTTCTTGGGTCCATTACTGAGAAACCTTTGA

Protein sequence

>Msa0687280

MNNCVEGRKRQLPSWMKRPVSVSVIDGIAYGPSCMMPIPKVDDASHESDSGNVVEANHSIENEAIGAANVKKIDCKKETIKRKSNSSAKGEVKGKTNLDQRNEMGDDDANENKKKKAIKSKDGAPRRSTKKRGNLEDLSHGGSDDVCLVQVSSDDDMELTVDDLMAIAEQYVKDYEEKELQETSSRQCEPNWQFPATAEAGTTLDSFRENKKPSNSVREALYNSSPATEEVIPTSTSQIGHPAQDMLDVFLGPLLRNL*