Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0343460 | XP_003588551.1 | 59.854 | 274 | 72 | 5 | 456 | 698 | 119 | 385 | 1.28e-95 | 311 |
Msa0343460 | XP_003588551.1 | 95.584 | 385 | 17 | 0 | 1 | 385 | 1 | 385 | 0.0 | 752 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0343460 | sp|Q08298|RD22_ARATH | 49.758 | 414 | 155 | 9 | 1 | 384 | 1 | 391 | 2.32e-113 | 350 |
Msa0343460 | sp|Q08298|RD22_ARATH | 43.750 | 240 | 100 | 4 | 490 | 697 | 155 | 391 | 3.34e-57 | 202 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0343460 | G7I4D4 | 59.854 | 274 | 72 | 5 | 456 | 698 | 119 | 385 | 6.12e-96 | 311 |
Msa0343460 | G7I4D4 | 95.584 | 385 | 17 | 0 | 1 | 385 | 1 | 385 | 0.0 | 752 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000310 | Msa0343460 | 0.823601 | 1.269024e-53 | -8.615850e-47 |
Msa0000610 | Msa0343460 | 0.803905 | 2.788650e-49 | -8.615850e-47 |
Msa0008330 | Msa0343460 | 0.860443 | 2.057709e-63 | -8.615850e-47 |
Msa0014970 | Msa0343460 | 0.820814 | 5.621951e-53 | -8.615850e-47 |
Msa0021980 | Msa0343460 | 0.802936 | 4.427820e-49 | -8.615850e-47 |
Msa0026120 | Msa0343460 | 0.806786 | 6.946725e-50 | -8.615850e-47 |
Msa0039780 | Msa0343460 | 0.801726 | 7.860443e-49 | -8.615850e-47 |
Msa0042130 | Msa0343460 | 0.826321 | 2.892419e-54 | -8.615850e-47 |
Msa0046860 | Msa0343460 | 0.844861 | 5.816108e-59 | -8.615850e-47 |
Msa0057270 | Msa0343460 | 0.942122 | 1.256686e-101 | -8.615850e-47 |
Msa0063850 | Msa0343460 | 0.807005 | 6.242124e-50 | -8.615850e-47 |
Msa0087370 | Msa0343460 | 0.802654 | 5.062998e-49 | -8.615850e-47 |
Msa0089410 | Msa0343460 | 0.807620 | 4.623993e-50 | -8.615850e-47 |
Msa0108500 | Msa0343460 | 0.814567 | 1.442824e-51 | -8.615850e-47 |
Msa0112800 | Msa0343460 | 0.807814 | 4.206176e-50 | -8.615850e-47 |
Msa0120310 | Msa0343460 | 0.801554 | 8.523303e-49 | -8.615850e-47 |
Msa0136520 | Msa0343460 | 0.823327 | 1.470189e-53 | -8.615850e-47 |
Msa0138380 | Msa0343460 | 0.814858 | 1.243565e-51 | -8.615850e-47 |
Msa0143360 | Msa0343460 | 0.802012 | 6.866163e-49 | -8.615850e-47 |
Msa0148590 | Msa0343460 | 0.830044 | 3.664516e-55 | -8.615850e-47 |
Msa0155500 | Msa0343460 | 0.802778 | 4.774504e-49 | -8.615850e-47 |
Msa0160650 | Msa0343460 | 0.808684 | 2.744517e-50 | -8.615850e-47 |
Msa0163530 | Msa0343460 | 0.802644 | 5.087896e-49 | -8.615850e-47 |
Msa0166580 | Msa0343460 | 0.815520 | 8.864536e-52 | -8.615850e-47 |
Msa0187560 | Msa0343460 | 0.878952 | 1.851173e-69 | -8.615850e-47 |
Msa0187820 | Msa0343460 | 0.845703 | 3.441226e-59 | -8.615850e-47 |
Msa0197600 | Msa0343460 | 0.845014 | 5.288750e-59 | -8.615850e-47 |
Msa0198140 | Msa0343460 | 0.823937 | 1.058103e-53 | -8.615850e-47 |
Msa0198220 | Msa0343460 | 0.826530 | 2.578502e-54 | -8.615850e-47 |
Msa0201910 | Msa0343460 | 0.852028 | 6.038836e-61 | -8.615850e-47 |
Msa0208400 | Msa0343460 | 0.814281 | 1.668712e-51 | -8.615850e-47 |
Msa0208560 | Msa0343460 | 0.813824 | 2.105069e-51 | -8.615850e-47 |
Msa0210870 | Msa0343460 | 0.807255 | 5.527105e-50 | -8.615850e-47 |
Msa0218430 | Msa0343460 | 0.807856 | 4.119842e-50 | -8.615850e-47 |
Msa0221940 | Msa0343460 | 0.816262 | 6.056235e-52 | -8.615850e-47 |
Msa0229420 | Msa0343460 | 0.826847 | 2.166574e-54 | -8.615850e-47 |
Msa0240290 | Msa0343460 | 0.828848 | 7.156865e-55 | -8.615850e-47 |
Msa0240460 | Msa0343460 | 0.814972 | 1.173131e-51 | -8.615850e-47 |
Msa0244370 | Msa0343460 | 0.857193 | 1.928985e-62 | -8.615850e-47 |
Msa0249670 | Msa0343460 | 0.803865 | 2.842608e-49 | -8.615850e-47 |
Msa0263470 | Msa0343460 | 0.801267 | 9.759476e-49 | -8.615850e-47 |
Msa0263520 | Msa0343460 | 0.806722 | 7.165542e-50 | -8.615850e-47 |
Msa0270640 | Msa0343460 | 0.805232 | 1.474616e-49 | -8.615850e-47 |
Msa0276060 | Msa0343460 | 0.811694 | 6.158045e-51 | -8.615850e-47 |
Msa0278080 | Msa0343460 | 0.819085 | 1.397715e-52 | -8.615850e-47 |
Msa0278340 | Msa0343460 | 0.823649 | 1.236111e-53 | -8.615850e-47 |
Msa0282880 | Msa0343460 | 0.858279 | 9.186356e-63 | -8.615850e-47 |
Msa0288280 | Msa0343460 | 0.805575 | 1.249417e-49 | -8.615850e-47 |
Msa0298590 | Msa0343460 | 0.812711 | 3.695443e-51 | -8.615850e-47 |
Msa0317630 | Msa0343460 | 0.829820 | 4.157197e-55 | -8.615850e-47 |
Msa0321180 | Msa0343460 | 0.861873 | 7.554441e-64 | -8.615850e-47 |
Msa0321200 | Msa0343460 | 0.861869 | 7.574039e-64 | -8.615850e-47 |
Msa0324390 | Msa0343460 | 0.828625 | 8.102099e-55 | -8.615850e-47 |
Msa0324430 | Msa0343460 | 0.808165 | 3.540385e-50 | -8.615850e-47 |
Msa0338610 | Msa0343460 | 0.809457 | 1.874529e-50 | -8.615850e-47 |
Msa0338670 | Msa0343460 | 0.805853 | 1.092425e-49 | -8.615850e-47 |
Msa0343200 | Msa0343460 | 0.817497 | 3.198376e-52 | -8.615850e-47 |
Msa0343460 | Msa0351600 | 0.801541 | 8.576305e-49 | -8.615850e-47 |
Msa0343460 | Msa0359230 | 0.802200 | 6.281405e-49 | -8.615850e-47 |
Msa0343460 | Msa0373110 | 0.820621 | 6.226224e-53 | -8.615850e-47 |
Msa0343460 | Msa0379720 | 0.850709 | 1.424939e-60 | -8.615850e-47 |
Msa0343460 | Msa0413590 | 0.872571 | 2.871858e-67 | -8.615850e-47 |
Msa0343460 | Msa0421480 | 0.802468 | 5.531625e-49 | -8.615850e-47 |
Msa0343460 | Msa0426990 | 0.807479 | 4.954157e-50 | -8.615850e-47 |
Msa0343460 | Msa0429100 | 0.870423 | 1.475807e-66 | -8.615850e-47 |
Msa0343460 | Msa0429130 | 0.841981 | 3.417042e-58 | -8.615850e-47 |
Msa0343460 | Msa0431940 | 0.805795 | 1.123487e-49 | -8.615850e-47 |
Msa0343460 | Msa0451370 | 0.815458 | 9.150187e-52 | -8.615850e-47 |
Msa0343460 | Msa0458690 | 0.858169 | 9.907489e-63 | -8.615850e-47 |
Msa0343460 | Msa0467480 | 0.816817 | 4.548649e-52 | -8.615850e-47 |
Msa0343460 | Msa0481620 | 0.887169 | 1.806941e-72 | -8.615850e-47 |
Msa0343460 | Msa0486210 | 0.806852 | 6.727142e-50 | -8.615850e-47 |
Msa0343460 | Msa0515400 | 0.810808 | 9.585817e-51 | -8.615850e-47 |
Msa0343460 | Msa0515420 | 0.823782 | 1.150916e-53 | -8.615850e-47 |
Msa0343460 | Msa0520810 | 0.812388 | 4.346492e-51 | -8.615850e-47 |
Msa0343460 | Msa0525940 | 0.801639 | 8.189940e-49 | -8.615850e-47 |
Msa0343460 | Msa0542330 | 0.862435 | 5.080305e-64 | -8.615850e-47 |
Msa0343460 | Msa0553570 | 0.818330 | 2.074055e-52 | -8.615850e-47 |
Msa0343460 | Msa0554410 | 0.838794 | 2.326851e-57 | -8.615850e-47 |
Msa0343460 | Msa0555510 | 0.816512 | 5.323765e-52 | -8.615850e-47 |
Msa0343460 | Msa0563230 | 0.826046 | 3.363307e-54 | -8.615850e-47 |
Msa0343460 | Msa0568050 | 0.822666 | 2.096130e-53 | -8.615850e-47 |
Msa0343460 | Msa0569630 | 0.822943 | 1.807058e-53 | -8.615850e-47 |
Msa0343460 | Msa0584590 | 0.862499 | 4.854320e-64 | -8.615850e-47 |
Msa0343460 | Msa0587060 | 0.815343 | 9.707219e-52 | -8.615850e-47 |
Msa0343460 | Msa0595240 | 0.805184 | 1.508645e-49 | -8.615850e-47 |
Msa0343460 | Msa0600500 | 0.858357 | 8.711346e-63 | -8.615850e-47 |
Msa0343460 | Msa0607620 | 0.807232 | 5.588801e-50 | -8.615850e-47 |
Msa0343460 | Msa0608940 | 0.811544 | 6.638007e-51 | -8.615850e-47 |
Msa0343460 | Msa0617470 | 0.802255 | 6.119311e-49 | -8.615850e-47 |
Msa0343460 | Msa0619480 | 0.815106 | 1.095677e-51 | -8.615850e-47 |
Msa0343460 | Msa0622400 | 0.801796 | 7.602681e-49 | -8.615850e-47 |
Msa0343460 | Msa0634260 | 0.810765 | 9.797372e-51 | -8.615850e-47 |
Msa0343460 | Msa0635070 | 0.803429 | 3.500881e-49 | -8.615850e-47 |
Msa0343460 | Msa0639630 | 0.859272 | 4.637512e-63 | -8.615850e-47 |
Msa0343460 | Msa0639640 | 0.877925 | 4.249646e-69 | -8.615850e-47 |
Msa0343460 | Msa0648160 | 0.847989 | 8.153441e-60 | -8.615850e-47 |
Msa0343460 | Msa0648200 | 0.805511 | 1.288662e-49 | -8.615850e-47 |
Msa0343460 | Msa0648260 | 0.826084 | 3.294085e-54 | -8.615850e-47 |
Msa0343460 | Msa0648300 | 0.802167 | 6.378526e-49 | -8.615850e-47 |
Msa0343460 | Msa0649530 | 0.811678 | 6.208762e-51 | -8.615850e-47 |
Msa0343460 | Msa0658920 | 0.811960 | 5.389850e-51 | -8.615850e-47 |
Msa0343460 | Msa0659640 | 0.808882 | 2.489943e-50 | -8.615850e-47 |
Msa0343460 | Msa0664110 | 0.809961 | 1.460720e-50 | -8.615850e-47 |
Msa0343460 | Msa0664130 | 0.805936 | 1.049334e-49 | -8.615850e-47 |
Msa0343460 | Msa0665010 | 0.807557 | 4.768641e-50 | -8.615850e-47 |
Msa0343460 | Msa0675250 | 0.802139 | 6.463656e-49 | -8.615850e-47 |
Msa0343460 | Msa0677460 | 0.846328 | 2.326956e-59 | -8.615850e-47 |
Msa0343460 | Msa0691140 | 0.825285 | 5.094224e-54 | -8.615850e-47 |
Msa0343460 | Msa0691180 | 0.809359 | 1.967283e-50 | -8.615850e-47 |
Msa0343460 | Msa0691740 | 0.811291 | 7.534021e-51 | -8.615850e-47 |
Msa0343460 | Msa0693560 | 0.805155 | 1.530267e-49 | -8.615850e-47 |
Msa0343460 | Msa0700250 | 0.809080 | 2.257641e-50 | -8.615850e-47 |
Msa0343460 | Msa0704350 | 0.811030 | 8.581647e-51 | -8.615850e-47 |
Msa0343460 | Msa0704430 | 0.817817 | 2.708413e-52 | -8.615850e-47 |
Msa0343460 | Msa0713530 | 0.816665 | 4.918618e-52 | -8.615850e-47 |
Msa0343460 | Msa0713590 | 0.848582 | 5.592030e-60 | -8.615850e-47 |
Msa0343460 | Msa0714930 | 0.813644 | 2.305898e-51 | -8.615850e-47 |
Msa0343460 | Msa0729780 | 0.820143 | 8.016579e-53 | -8.615850e-47 |
Msa0343460 | Msa0747660 | 0.869974 | 2.071022e-66 | -8.615850e-47 |
Msa0343460 | Msa0749130 | 0.845138 | 4.896926e-59 | -8.615850e-47 |
Msa0343460 | Msa0753330 | 0.804994 | 1.653672e-49 | -8.615850e-47 |
Msa0343460 | Msa0755530 | 0.851361 | 9.328958e-61 | -8.615850e-47 |
Msa0343460 | Msa0755590 | 0.808080 | 3.691682e-50 | -8.615850e-47 |
Msa0343460 | Msa0756940 | 0.815552 | 8.722029e-52 | -8.615850e-47 |
Msa0343460 | Msa0770020 | 0.810829 | 9.488742e-51 | -8.615850e-47 |
Msa0343460 | Msa0785670 | 0.822372 | 2.453575e-53 | -8.615850e-47 |
Msa0343460 | Msa0797210 | 0.855938 | 4.508584e-62 | -8.615850e-47 |
Msa0343460 | Msa0797240 | 0.808701 | 2.721115e-50 | -8.615850e-47 |
Msa0343460 | Msa0832560 | 0.800319 | 1.523815e-48 | -8.615850e-47 |
Msa0343460 | Msa0835010 | 0.814868 | 1.237229e-51 | -8.615850e-47 |
Msa0343460 | Msa0835070 | 0.848674 | 5.273549e-60 | -8.615850e-47 |
Msa0343460 | Msa0836510 | 0.817116 | 3.895856e-52 | -8.615850e-47 |
Msa0343460 | Msa0848980 | 0.822150 | 2.762559e-53 | -8.615850e-47 |
Msa0343460 | Msa0857080 | 0.815571 | 8.636342e-52 | -8.615850e-47 |
Msa0343460 | Msa0873070 | 0.808219 | 3.448951e-50 | -8.615850e-47 |
Msa0343460 | Msa0894530 | 0.804926 | 1.708828e-49 | -8.615850e-47 |
Msa0343460 | Msa0899080 | 0.833462 | 5.261244e-56 | -8.615850e-47 |
Msa0343460 | Msa0906310 | 0.827355 | 1.637937e-54 | -8.615850e-47 |
Msa0343460 | Msa0927890 | 0.816727 | 4.763120e-52 | -8.615850e-47 |
Msa0343460 | Msa0930090 | 0.813932 | 1.992976e-51 | -8.615850e-47 |
Msa0343460 | Msa0938190 | 0.802660 | 5.047870e-49 | -8.615850e-47 |
Msa0343460 | Msa0959710 | 0.803720 | 3.047293e-49 | -8.615850e-47 |
Msa0343460 | Msa0967250 | 0.849461 | 3.187083e-60 | -8.615850e-47 |
Msa0343460 | Msa0967260 | 0.822786 | 1.965678e-53 | -8.615850e-47 |
Msa0343460 | Msa0975460 | 0.832307 | 1.018796e-55 | -8.615850e-47 |
Msa0343460 | Msa0978440 | 0.805389 | 1.366568e-49 | -8.615850e-47 |
Msa0343460 | Msa0983030 | 0.800407 | 1.462181e-48 | -8.615850e-47 |
Msa0343460 | Msa0998900 | 0.820020 | 8.550503e-53 | -8.615850e-47 |
Msa0343460 | Msa0998940 | 0.837021 | 6.643575e-57 | -8.615850e-47 |
Msa0343460 | Msa1008960 | 0.834956 | 2.220290e-56 | -8.615850e-47 |
Msa0343460 | Msa1018730 | 0.818958 | 1.493472e-52 | -8.615850e-47 |
Msa0343460 | Msa1029190 | 0.813282 | 2.769303e-51 | -8.615850e-47 |
Msa0343460 | Msa1038420 | 0.864247 | 1.394879e-64 | -8.615850e-47 |
Msa0343460 | Msa1038570 | 0.808081 | 3.690538e-50 | -8.615850e-47 |
Msa0343460 | Msa1038580 | 0.811589 | 6.491163e-51 | -8.615850e-47 |
Msa0343460 | Msa1038610 | 0.822270 | 2.591329e-53 | -8.615850e-47 |
Msa0343460 | Msa1042380 | 0.800725 | 1.259302e-48 | -8.615850e-47 |
Msa0343460 | Msa1044450 | 0.804488 | 2.108556e-49 | -8.615850e-47 |
Msa0343460 | Msa1050320 | 0.817585 | 3.054738e-52 | -8.615850e-47 |
Msa0343460 | Msa1089130 | 0.847067 | 1.462078e-59 | -8.615850e-47 |
Msa0343460 | Msa1090020 | 0.805040 | 1.616931e-49 | -8.615850e-47 |
Msa0343460 | Msa1129160 | 0.811433 | 7.017696e-51 | -8.615850e-47 |
Msa0343460 | Msa1129320 | 0.884688 | 1.548115e-71 | -8.615850e-47 |
Msa0343460 | Msa1147190 | 0.800632 | 1.316018e-48 | -8.615850e-47 |
Msa0343460 | Msa1147600 | 0.832511 | 9.069216e-56 | -8.615850e-47 |
Msa0343460 | Msa1154750 | 0.812678 | 3.757755e-51 | -8.615850e-47 |
Msa0343460 | Msa1172070 | 0.809759 | 1.614120e-50 | -8.615850e-47 |
Msa0343460 | Msa1172120 | 0.819696 | 1.013924e-52 | -8.615850e-47 |
Msa0343460 | Msa1186010 | 0.811979 | 5.338995e-51 | -8.615850e-47 |
Msa0343460 | Msa1190980 | 0.802878 | 4.551927e-49 | -8.615850e-47 |
Msa0343460 | Msa1203840 | 0.820629 | 6.201382e-53 | -8.615850e-47 |
Msa0343460 | Msa1203860 | 0.800649 | 1.305589e-48 | -8.615850e-47 |
Msa0343460 | Msa1204380 | 0.833650 | 4.721849e-56 | -8.615850e-47 |
Msa0343460 | Msa1204390 | 0.836748 | 7.803740e-57 | -8.615850e-47 |
Msa0343460 | Msa1208510 | 0.813868 | 2.058121e-51 | -8.615850e-47 |
Msa0343460 | Msa1211280 | 0.835338 | 1.779020e-56 | -8.615850e-47 |
Msa0343460 | Msa1211370 | 0.811904 | 5.542862e-51 | -8.615850e-47 |
Msa0343460 | Msa1245300 | 0.815676 | 8.180659e-52 | -8.615850e-47 |
Msa0343460 | Msa1262740 | 0.838936 | 2.138290e-57 | -8.615850e-47 |
Msa0343460 | Msa1264230 | 0.830138 | 3.475726e-55 | -8.615850e-47 |
Msa0343460 | Msa1277890 | 0.804398 | 2.202379e-49 | -8.615850e-47 |
Msa0343460 | Msa1293580 | 0.800541 | 1.373436e-48 | -8.615850e-47 |
Msa0343460 | Msa1296600 | 0.833768 | 4.410855e-56 | -8.615850e-47 |
Msa0343460 | Msa1296610 | 0.816706 | 4.816668e-52 | -8.615850e-47 |
Msa0343460 | Msa1298540 | 0.820525 | 6.549521e-53 | -8.615850e-47 |
Msa0343460 | Msa1302920 | 0.833667 | 4.674730e-56 | -8.615850e-47 |
Msa0343460 | Msa1326900 | 0.822651 | 2.113979e-53 | -8.615850e-47 |
Msa0343460 | Msa1329010 | 0.833683 | 4.633724e-56 | -8.615850e-47 |
Msa0343460 | Msa1329020 | 0.838688 | 2.479089e-57 | -8.615850e-47 |
Msa0343460 | Msa1329820 | 0.836365 | 9.765062e-57 | -8.615850e-47 |
Msa0343460 | Msa1330240 | 0.808240 | 3.412608e-50 | -8.615850e-47 |
Msa0343460 | Msa1330900 | 0.826080 | 3.301269e-54 | -8.615850e-47 |
Msa0343460 | Msa1330910 | 0.804147 | 2.483688e-49 | -8.615850e-47 |
Msa0343460 | Msa1343540 | 0.827849 | 1.246259e-54 | -8.615850e-47 |
Msa0343460 | Msa1346920 | 0.842850 | 2.010033e-58 | -8.615850e-47 |
Msa0343460 | Msa1351560 | 0.829270 | 5.653622e-55 | -8.615850e-47 |
Msa0343460 | Msa1351590 | 0.801215 | 9.999924e-49 | -8.615850e-47 |
Msa0343460 | Msa1356730 | 0.800806 | 1.212259e-48 | -8.615850e-47 |
Msa0343460 | Msa1358030 | 0.803485 | 3.408447e-49 | -8.615850e-47 |
Msa0343460 | Msa1368660 | 0.805996 | 1.019054e-49 | -8.615850e-47 |
Msa0343460 | Msa1369860 | 0.820671 | 6.064055e-53 | -8.615850e-47 |
Msa0343460 | Msa1391600 | 0.818102 | 2.335315e-52 | -8.615850e-47 |
Msa0343460 | Msa1395360 | 0.818135 | 2.295900e-52 | -8.615850e-47 |
Msa0343460 | Msa1397550 | 0.825144 | 5.502095e-54 | -8.615850e-47 |
Msa0343460 | Msa1413880 | 0.837315 | 5.587294e-57 | -8.615850e-47 |
Msa0343460 | Msa1414790 | 0.805607 | 1.230524e-49 | -8.615850e-47 |
Msa0343460 | Msa1427260 | 0.818424 | 1.974439e-52 | -8.615850e-47 |
Msa0343460 | Msa1433380 | 0.817843 | 2.671779e-52 | -8.615850e-47 |
Msa0343460 | Msa1440160 | 0.847291 | 1.269292e-59 | -8.615850e-47 |
Msa0343460 | Msa1443440 | 0.804534 | 2.062819e-49 | -8.615850e-47 |
Msa0343460 | Msa1445700 | 0.827141 | 1.843438e-54 | -8.615850e-47 |
Msa0343460 | Msa1446220 | 0.828108 | 1.079771e-54 | -8.615850e-47 |
Msa0343460 | Msa1452300 | 0.800715 | 1.265652e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0343460 | MtrunA17_Chr1g0147271 | 95.584 | 385 | 17 | 0 | 1 | 385 | 1 | 385 | 0.0 | 752 |
Msa0343460 | MtrunA17_Chr1g0147271 | 52.116 | 378 | 84 | 8 | 412 | 698 | 14 | 385 | 5.81e-113 | 345 |
Msa0343460 | MtrunA17_Chr1g0147311 | 78.193 | 321 | 32 | 4 | 412 | 698 | 40 | 356 | 1.32e-173 | 500 |
Msa0343460 | MtrunA17_Chr1g0147311 | 56.709 | 395 | 96 | 6 | 1 | 385 | 27 | 356 | 4.20e-138 | 409 |
Msa0343460 | MtrunA17_Chr1g0147291 | 80.074 | 271 | 20 | 2 | 458 | 698 | 1 | 267 | 1.34e-149 | 435 |
Msa0343460 | MtrunA17_Chr1g0147291 | 70.139 | 288 | 62 | 3 | 100 | 385 | 2 | 267 | 2.71e-132 | 390 |
Msa0343460 | MtrunA17_Chr1g0146631 | 60.668 | 389 | 85 | 7 | 1 | 385 | 1 | 325 | 5.25e-149 | 436 |
Msa0343460 | MtrunA17_Chr1g0146631 | 63.208 | 318 | 80 | 6 | 412 | 698 | 14 | 325 | 1.96e-130 | 388 |
Msa0343460 | MtrunA17_Chr1g0147301 | 76.950 | 282 | 30 | 4 | 448 | 698 | 8 | 285 | 1.55e-147 | 431 |
Msa0343460 | MtrunA17_Chr1g0147301 | 69.630 | 270 | 77 | 3 | 121 | 385 | 16 | 285 | 8.83e-128 | 380 |
Msa0343460 | MtrunA17_Chr1g0147331 | 61.183 | 389 | 83 | 7 | 1 | 385 | 1 | 325 | 1.46e-143 | 422 |
Msa0343460 | MtrunA17_Chr1g0147331 | 64.375 | 320 | 73 | 7 | 412 | 698 | 14 | 325 | 2.20e-124 | 373 |
Msa0343460 | MtrunA17_Chr1g0147241 | 56.995 | 386 | 92 | 9 | 1 | 385 | 1 | 313 | 1.30e-131 | 391 |
Msa0343460 | MtrunA17_Chr1g0147241 | 50.949 | 316 | 110 | 7 | 412 | 698 | 14 | 313 | 3.10e-95 | 297 |
Msa0343460 | MtrunA17_Chr3g0139431 | 50.000 | 386 | 124 | 5 | 1 | 383 | 1 | 320 | 1.44e-125 | 375 |
Msa0343460 | MtrunA17_Chr3g0139431 | 45.912 | 318 | 128 | 7 | 412 | 696 | 14 | 320 | 2.11e-87 | 277 |
Msa0343460 | MtrunA17_Chr1g0147321 | 78.166 | 229 | 47 | 1 | 156 | 384 | 12 | 237 | 1.63e-125 | 373 |
Msa0343460 | MtrunA17_Chr1g0147321 | 76.316 | 228 | 20 | 2 | 500 | 697 | 14 | 237 | 6.91e-116 | 348 |
Msa0343460 | MtrunA17_Chr1g0147261 | 68.657 | 268 | 66 | 4 | 118 | 385 | 51 | 300 | 3.02e-120 | 361 |
Msa0343460 | MtrunA17_Chr1g0147261 | 48.580 | 317 | 103 | 7 | 412 | 698 | 14 | 300 | 5.90e-91 | 285 |
Msa0343460 | MtrunA17_Chr1g0147261 | 68.750 | 64 | 17 | 1 | 1 | 64 | 1 | 61 | 8.58e-19 | 87.8 |
Msa0343460 | MtrunA17_Chr1g0147251 | 70.339 | 236 | 63 | 4 | 151 | 385 | 14 | 243 | 3.34e-109 | 330 |
Msa0343460 | MtrunA17_Chr1g0147251 | 51.883 | 239 | 79 | 5 | 490 | 698 | 11 | 243 | 8.32e-74 | 238 |
Msa0343460 | MtrunA17_Chr4g0034821 | 42.667 | 225 | 124 | 4 | 165 | 385 | 69 | 292 | 9.38e-57 | 195 |
Msa0343460 | MtrunA17_Chr4g0034821 | 31.696 | 224 | 117 | 4 | 509 | 698 | 71 | 292 | 1.86e-30 | 122 |
Msa0343460 | MtrunA17_Chr3g0144421 | 43.498 | 223 | 120 | 4 | 165 | 383 | 81 | 301 | 4.53e-55 | 191 |
Msa0343460 | MtrunA17_Chr3g0144421 | 32.895 | 228 | 114 | 6 | 503 | 696 | 79 | 301 | 1.29e-29 | 119 |
Msa0343460 | MtrunA17_Chr3g0138231 | 41.880 | 234 | 131 | 3 | 165 | 394 | 44 | 276 | 5.80e-55 | 189 |
Msa0343460 | MtrunA17_Chr3g0138231 | 33.036 | 224 | 114 | 5 | 509 | 698 | 46 | 267 | 2.84e-29 | 117 |
Msa0343460 | MtrunA17_Chr3g0144451 | 43.111 | 225 | 123 | 4 | 165 | 385 | 53 | 276 | 7.77e-55 | 189 |
Msa0343460 | MtrunA17_Chr3g0144451 | 31.696 | 224 | 117 | 5 | 509 | 698 | 55 | 276 | 3.60e-28 | 114 |
Msa0343460 | MtrunA17_Chr3g0144411 | 40.367 | 218 | 120 | 5 | 171 | 383 | 325 | 537 | 3.85e-44 | 166 |
Msa0343460 | MtrunA17_Chr3g0144411 | 32.273 | 220 | 106 | 6 | 513 | 696 | 325 | 537 | 5.85e-27 | 115 |
Msa0343460 | MtrunA17_Chr3g0144391 | 38.532 | 218 | 124 | 5 | 171 | 383 | 292 | 504 | 1.25e-42 | 161 |
Msa0343460 | MtrunA17_Chr3g0144391 | 31.818 | 220 | 107 | 6 | 513 | 696 | 292 | 504 | 5.23e-27 | 115 |
Msa0343460 | MtrunA17_Chr4g0034451 | 36.287 | 237 | 140 | 7 | 153 | 383 | 294 | 525 | 2.31e-41 | 158 |
Msa0343460 | MtrunA17_Chr4g0034451 | 32.273 | 220 | 108 | 8 | 513 | 696 | 311 | 525 | 1.41e-26 | 114 |
Msa0343460 | MtrunA17_Chr4g0034731 | 36.986 | 219 | 128 | 6 | 171 | 383 | 217 | 431 | 1.17e-40 | 154 |
Msa0343460 | MtrunA17_Chr4g0034731 | 29.825 | 228 | 119 | 7 | 505 | 696 | 209 | 431 | 1.27e-22 | 101 |
Msa0343460 | MtrunA17_Chr4g0034721 | 37.443 | 219 | 127 | 6 | 171 | 383 | 361 | 575 | 2.83e-38 | 150 |
Msa0343460 | MtrunA17_Chr4g0034721 | 29.091 | 220 | 115 | 7 | 513 | 696 | 361 | 575 | 4.54e-21 | 97.8 |
Msa0343460 | MtrunA17_Chr4g0034691 | 36.986 | 219 | 128 | 6 | 171 | 383 | 493 | 707 | 3.50e-37 | 148 |
Msa0343460 | MtrunA17_Chr4g0034691 | 30.631 | 222 | 109 | 8 | 513 | 696 | 493 | 707 | 5.03e-22 | 101 |
Msa0343460 | MtrunA17_Chr8g0365361 | 36.530 | 219 | 129 | 5 | 171 | 384 | 181 | 394 | 4.89e-37 | 143 |
Msa0343460 | MtrunA17_Chr8g0365361 | 27.523 | 218 | 121 | 6 | 513 | 697 | 181 | 394 | 4.06e-19 | 90.1 |
Msa0343460 | MtrunA17_Chr8g0355311 | 44.444 | 144 | 73 | 4 | 240 | 383 | 53 | 189 | 5.93e-34 | 129 |
Msa0343460 | MtrunA17_Chr8g0355311 | 43.299 | 97 | 51 | 3 | 600 | 696 | 97 | 189 | 5.61e-19 | 85.9 |
Msa0343460 | MtrunA17_Chr8g0365401 | 35.616 | 219 | 131 | 5 | 171 | 384 | 412 | 625 | 6.11e-34 | 137 |
Msa0343460 | MtrunA17_Chr8g0365401 | 26.064 | 188 | 108 | 4 | 541 | 697 | 438 | 625 | 1.02e-16 | 84.3 |
Msa0343460 | MtrunA17_Chr8g0355861 | 35.211 | 213 | 115 | 7 | 172 | 383 | 69 | 259 | 6.62e-34 | 130 |
Msa0343460 | MtrunA17_Chr8g0355861 | 28.014 | 282 | 140 | 10 | 427 | 696 | 29 | 259 | 1.86e-21 | 95.1 |
Msa0343460 | MtrunA17_Chr5g0413591 | 33.641 | 217 | 136 | 5 | 171 | 383 | 415 | 627 | 1.87e-32 | 133 |
Msa0343460 | MtrunA17_Chr5g0413591 | 25.229 | 218 | 124 | 6 | 513 | 696 | 415 | 627 | 7.93e-18 | 87.8 |
Msa0343460 | MtrunA17_Chr8g0365381 | 35.160 | 219 | 132 | 6 | 171 | 384 | 429 | 642 | 2.09e-32 | 133 |
Msa0343460 | MtrunA17_Chr8g0365381 | 27.189 | 217 | 123 | 6 | 513 | 697 | 429 | 642 | 2.26e-17 | 86.3 |
Msa0343460 | MtrunA17_Chr8g0355321 | 42.361 | 144 | 76 | 3 | 240 | 383 | 165 | 301 | 2.39e-32 | 127 |
Msa0343460 | MtrunA17_Chr8g0355321 | 29.524 | 315 | 173 | 13 | 412 | 696 | 6 | 301 | 1.72e-24 | 104 |
Msa0343460 | MtrunA17_Chr1g0147231 | 76.829 | 82 | 17 | 2 | 157 | 237 | 50 | 130 | 9.17e-32 | 120 |
Msa0343460 | MtrunA17_Chr1g0147231 | 59.783 | 92 | 33 | 3 | 491 | 580 | 41 | 130 | 8.83e-24 | 97.8 |
Msa0343460 | MtrunA17_Chr3g0117791 | 37.173 | 191 | 113 | 4 | 198 | 384 | 439 | 626 | 1.65e-31 | 130 |
Msa0343460 | MtrunA17_Chr3g0117791 | 27.660 | 188 | 105 | 3 | 541 | 697 | 439 | 626 | 9.74e-19 | 90.5 |
Msa0343460 | MtrunA17_Chr8g0355871 | 36.123 | 227 | 111 | 8 | 163 | 383 | 23 | 221 | 1.96e-31 | 122 |
Msa0343460 | MtrunA17_Chr8g0355871 | 41.237 | 97 | 53 | 3 | 600 | 696 | 129 | 221 | 3.40e-18 | 84.3 |
Msa0343460 | MtrunA17_Chr6g0485051 | 32.995 | 197 | 124 | 6 | 198 | 387 | 13 | 208 | 2.99e-31 | 121 |
Msa0343460 | MtrunA17_Chr6g0485051 | 25.128 | 195 | 108 | 6 | 541 | 698 | 13 | 206 | 1.53e-14 | 73.2 |
Msa0343460 | MtrunA17_Chr8g0355331 | 40.667 | 150 | 82 | 3 | 234 | 383 | 278 | 420 | 3.14e-31 | 127 |
Msa0343460 | MtrunA17_Chr8g0355331 | 40.206 | 97 | 54 | 3 | 600 | 696 | 328 | 420 | 7.99e-17 | 83.6 |
Msa0343460 | MtrunA17_Chr2g0318901 | 36.449 | 214 | 107 | 7 | 171 | 383 | 73 | 258 | 9.58e-31 | 122 |
Msa0343460 | MtrunA17_Chr2g0318901 | 26.689 | 296 | 154 | 10 | 412 | 696 | 15 | 258 | 1.51e-23 | 100 |
Msa0343460 | MtrunA17_Chr8g0355841 | 43.750 | 144 | 74 | 4 | 240 | 383 | 372 | 508 | 5.61e-29 | 121 |
Msa0343460 | MtrunA17_Chr8g0355841 | 39.175 | 97 | 55 | 3 | 600 | 696 | 416 | 508 | 4.98e-16 | 81.6 |
Msa0343460 | MtrunA17_Chr8g0355831 | 43.151 | 146 | 76 | 3 | 238 | 383 | 212 | 350 | 8.96e-29 | 118 |
Msa0343460 | MtrunA17_Chr8g0355831 | 35.106 | 94 | 58 | 2 | 603 | 696 | 260 | 350 | 2.52e-14 | 75.1 |
Msa0343460 | MtrunA17_Chr2g0318871 | 32.889 | 225 | 122 | 7 | 160 | 383 | 62 | 258 | 3.49e-28 | 114 |
Msa0343460 | MtrunA17_Chr2g0318871 | 25.085 | 295 | 160 | 9 | 412 | 696 | 15 | 258 | 4.53e-20 | 90.9 |
Msa0343460 | MtrunA17_Chr2g0318931 | 32.599 | 227 | 103 | 6 | 171 | 383 | 79 | 269 | 5.24e-28 | 114 |
Msa0343460 | MtrunA17_Chr2g0318931 | 26.042 | 288 | 147 | 11 | 424 | 696 | 33 | 269 | 2.29e-17 | 83.2 |
Msa0343460 | MtrunA17_Chr4g0076231 | 35.484 | 155 | 96 | 3 | 231 | 382 | 3 | 156 | 4.48e-26 | 105 |
Msa0343460 | MtrunA17_Chr4g0076231 | 29.565 | 115 | 76 | 2 | 586 | 695 | 42 | 156 | 8.02e-14 | 69.7 |
Msa0343460 | MtrunA17_Chr1g0168781 | 39.456 | 147 | 77 | 4 | 240 | 383 | 121 | 258 | 1.14e-25 | 107 |
Msa0343460 | MtrunA17_Chr1g0168781 | 25.170 | 294 | 162 | 6 | 412 | 696 | 14 | 258 | 6.44e-22 | 96.3 |
Msa0343460 | MtrunA17_Chr5g0412981 | 30.942 | 223 | 146 | 5 | 169 | 387 | 195 | 413 | 1.41e-25 | 110 |
Msa0343460 | MtrunA17_Chr5g0412981 | 31.609 | 174 | 112 | 4 | 197 | 366 | 14 | 184 | 2.32e-16 | 82.0 |
Msa0343460 | MtrunA17_Chr5g0412981 | 24.312 | 218 | 132 | 7 | 511 | 697 | 195 | 410 | 1.07e-13 | 73.6 |
Msa0343460 | MtrunA17_Chr5g0412991 | 30.942 | 223 | 146 | 5 | 169 | 387 | 195 | 413 | 1.58e-25 | 109 |
Msa0343460 | MtrunA17_Chr5g0412991 | 31.034 | 174 | 113 | 4 | 197 | 366 | 14 | 184 | 4.97e-16 | 80.9 |
Msa0343460 | MtrunA17_Chr5g0412991 | 24.312 | 218 | 132 | 7 | 511 | 697 | 195 | 410 | 1.04e-13 | 73.9 |
Msa0343460 | MtrunA17_Chr5g0412951 | 30.769 | 195 | 128 | 4 | 197 | 387 | 21 | 212 | 1.39e-21 | 93.6 |
Msa0343460 | MtrunA17_Chr5g0412951 | 23.500 | 200 | 122 | 6 | 527 | 695 | 8 | 207 | 4.66e-11 | 63.2 |
Msa0343460 | MtrunA17_Chr1g0147281 | 74.468 | 47 | 12 | 0 | 412 | 458 | 14 | 60 | 5.56e-18 | 79.3 |
Msa0343460 | MtrunA17_Chr5g0413021 | 33.333 | 135 | 84 | 3 | 256 | 387 | 1 | 132 | 6.42e-17 | 77.8 |
Msa0343460 | MtrunA17_Chr5g0413021 | 31.818 | 88 | 59 | 1 | 611 | 697 | 42 | 129 | 6.18e-13 | 66.2 |
Msa0343460 | MtrunA17_Chr8g0371951 | 43.038 | 79 | 41 | 2 | 298 | 373 | 10 | 87 | 2.07e-16 | 74.7 |
Msa0343460 | MtrunA17_Chr8g0371951 | 39.744 | 78 | 45 | 1 | 611 | 686 | 10 | 87 | 1.05e-13 | 67.0 |
Msa0343460 | MtrunA17_Chr4g0034051 | 44.737 | 76 | 39 | 3 | 311 | 383 | 3 | 78 | 3.57e-16 | 74.3 |
Msa0343460 | MtrunA17_Chr4g0034051 | 38.158 | 76 | 44 | 3 | 624 | 696 | 3 | 78 | 1.12e-11 | 61.2 |
Msa0343460 | MtrunA17_Chr5g0413001 | 36.486 | 74 | 46 | 1 | 315 | 387 | 2 | 75 | 6.58e-12 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0343460 | AT5G25610.1 | 49.758 | 414 | 155 | 9 | 1 | 384 | 1 | 391 | 2.36e-114 | 350 |
Msa0343460 | AT5G25610.1 | 43.750 | 240 | 100 | 4 | 490 | 697 | 155 | 391 | 3.40e-58 | 202 |
Msa0343460 | AT1G49320.1 | 38.095 | 231 | 133 | 5 | 164 | 385 | 51 | 280 | 1.47e-46 | 167 |
Msa0343460 | AT1G49320.1 | 31.197 | 234 | 116 | 6 | 506 | 698 | 51 | 280 | 6.28e-25 | 105 |
Msa0343460 | AT1G60390.1 | 34.862 | 218 | 130 | 4 | 171 | 382 | 409 | 620 | 1.86e-32 | 134 |
Msa0343460 | AT1G60390.1 | 29.167 | 216 | 116 | 6 | 513 | 695 | 409 | 620 | 1.60e-18 | 90.5 |
Msa0343460 | AT1G70370.2 | 35.023 | 217 | 133 | 4 | 171 | 383 | 411 | 623 | 5.01e-32 | 132 |
Msa0343460 | AT1G70370.2 | 26.977 | 215 | 124 | 4 | 513 | 696 | 411 | 623 | 1.55e-17 | 87.4 |
Msa0343460 | AT1G70370.1 | 35.023 | 217 | 133 | 4 | 171 | 383 | 411 | 623 | 5.01e-32 | 132 |
Msa0343460 | AT1G70370.1 | 26.977 | 215 | 124 | 4 | 513 | 696 | 411 | 623 | 1.55e-17 | 87.4 |
Msa0343460 | AT1G23760.1 | 34.703 | 219 | 131 | 6 | 171 | 383 | 407 | 619 | 2.22e-30 | 127 |
Msa0343460 | AT1G23760.1 | 25.668 | 187 | 108 | 3 | 541 | 696 | 433 | 619 | 2.64e-15 | 80.1 |
Find 146 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTATTCCCTTCCTATAAA+TGG | 0.229668 | 3_1:+1603796 | Msa0343460:five_prime_UTR |
TCATGAAAAGCATAATATTT+AGG | 0.243591 | 3_1:-1612352 | None:intergenic |
TTCTTCTGTTCCTTCCTTGA+TGG | 0.248730 | 3_1:-1606233 | None:intergenic |
GGCAAAAGGTGTGAAGAAAT+TGG | 0.273962 | 3_1:+1606438 | Msa0343460:CDS |
TCAACTTTGCTTGAAGAAAA+AGG | 0.278404 | 3_1:-1606190 | None:intergenic |
AAGAAGAAAAGTGCTACATT+AGG | 0.279006 | 3_1:-1606064 | None:intergenic |
ACTGAATTAGCAACTTCTTT+AGG | 0.281558 | 3_1:-1606166 | None:intergenic |
TATTTCCACCTCAGTATTAC+TGG | 0.282247 | 3_1:+1610804 | Msa0343460:CDS |
CCCACAGGATCATGTTGTTT+GGG | 0.282262 | 3_1:+1612417 | Msa0343460:CDS |
TTCCACAGGATCATGTTGTT+TGG | 0.285326 | 3_1:+1606692 | Msa0343460:CDS |
TCCCACAGGATCATGTTGTT+TGG | 0.287622 | 3_1:+1612416 | Msa0343460:CDS |
TTCCTTTGATCCTTCTTTGA+TGG | 0.296396 | 3_1:-1611957 | None:intergenic |
CATTTGAGTTGAGGGAAGTT+TGG | 0.297886 | 3_1:-1604131 | None:intergenic |
TTGGACTTCCAGTACACTTC+AGG | 0.301847 | 3_1:-1604112 | None:intergenic |
ACTTGAAAAGCCAAATGTTT+AGG | 0.303666 | 3_1:-1606628 | None:intergenic |
TCCACAGGATCATGTTGTTT+GGG | 0.305699 | 3_1:+1606693 | Msa0343460:CDS |
AGGAGATCAGTGATGGCTTT+TGG | 0.313417 | 3_1:-1604154 | None:intergenic |
TGTGACATCATTGGAATCTA+TGG | 0.323363 | 3_1:+1606324 | Msa0343460:CDS |
TAGTTAATCAATTTCCACTA+TGG | 0.337436 | 3_1:+1603909 | Msa0343460:exon |
TGGCCTCACACACCATTTAT+AGG | 0.339500 | 3_1:-1603808 | None:intergenic |
TAACTAGAGCTCCAACTAAA+TGG | 0.348136 | 3_1:-1603892 | None:intergenic |
ATAAGTGAGTGTGAAGAAAA+TGG | 0.348496 | 3_1:+1606277 | Msa0343460:CDS |
AGAAGATCAGTAATGGCTTT+TGG | 0.358615 | 3_1:-1610854 | None:intergenic |
GGAGGTGTGAATGTTGATTC+AGG | 0.361960 | 3_1:+1605755 | Msa0343460:CDS |
ACCTTTGGTGGGTCGGAAAC+CGG | 0.369518 | 3_1:+1609982 | Msa0343460:CDS |
ACAATGGAATCCTAAACATT+TGG | 0.370419 | 3_1:+1606618 | Msa0343460:CDS |
TTCACTTACTACCATTTAGT+TGG | 0.373824 | 3_1:+1603881 | Msa0343460:five_prime_UTR |
GAGACAGCTTCAAATAATAA+TGG | 0.381450 | 3_1:+1611854 | Msa0343460:CDS |
CCAAAGGTGGGCGACTAATC+CGG | 0.398077 | 3_1:-1609967 | None:intergenic |
GATTAGTCGCCCACCTTTGG+TGG | 0.398355 | 3_1:+1609970 | Msa0343460:CDS |
CAACAATATGTTATAGCAAA+AGG | 0.401264 | 3_1:+1612148 | Msa0343460:CDS |
TTCCTTTACCTGCATTTACA+TGG | 0.401546 | 3_1:-1605889 | None:intergenic |
AGAAGAAAAGTGCTACATTA+GGG | 0.408499 | 3_1:-1606063 | None:intergenic |
AAGTAAAACAATGGAACAAA+TGG | 0.409077 | 3_1:-1611722 | None:intergenic |
TGTGGGAGGATGTGACAAAT+AGG | 0.414162 | 3_1:-1612400 | None:intergenic |
TGAAGTTTACTATGTTGCTT+TGG | 0.415184 | 3_1:+1606540 | Msa0343460:CDS |
CCGGATTAGTCGCCCACCTT+TGG | 0.416418 | 3_1:+1609967 | Msa0343460:CDS |
GTGCCCTTGGAATGTGTTGA+TGG | 0.426115 | 3_1:+1612277 | Msa0343460:CDS |
GTTGCTTTGGAAGGTGTTGA+TGG | 0.433887 | 3_1:+1606553 | Msa0343460:CDS |
GCAAAAGGTGTGAAGAAATT+GGG | 0.438714 | 3_1:+1606439 | Msa0343460:CDS |
TCCAATTTGATTGATGAAAA+CGG | 0.443565 | 3_1:-1611914 | None:intergenic |
CAAGAATATGTAATGGCAAA+AGG | 0.445313 | 3_1:+1606424 | Msa0343460:CDS |
TTAGAAAAGGATTTGCATCA+AGG | 0.448118 | 3_1:+1606085 | Msa0343460:CDS |
CCTTGATGGAGAACATGTTA+AGG | 0.448883 | 3_1:-1606219 | None:intergenic |
TGTGGAAGGAAGTGACAAAC+TGG | 0.450964 | 3_1:-1606676 | None:intergenic |
CAAGTGCTCAATGTTCAACC+TGG | 0.454270 | 3_1:+1606646 | Msa0343460:CDS |
GATTTCACTACTTCGAAACT+TGG | 0.458312 | 3_1:+1606349 | Msa0343460:CDS |
GTCAATGTTCATGCAGGAAA+AGG | 0.459109 | 3_1:+1605953 | Msa0343460:CDS |
ACATTCACTGAGGTTCCTCC+TGG | 0.460070 | 3_1:-1605788 | None:intergenic |
GTGCGTAGAGGCATGCGCAC+TGG | 0.467689 | 3_1:-1609941 | None:intergenic |
TGAAGTTTACTCTGTGCCCT+TGG | 0.470084 | 3_1:+1612264 | Msa0343460:CDS |
GTAGATGTTGGAGTCAGAAA+AGG | 0.471539 | 3_1:+1611659 | Msa0343460:CDS |
ACATTCACTGCTGTTCCACC+TGG | 0.472880 | 3_1:-1605851 | None:intergenic |
AATGGTGTGTGAGGCCACTT+AGG | 0.478244 | 3_1:+1603814 | Msa0343460:five_prime_UTR |
CATGAGCTTAAAGTTCAACC+TGG | 0.481587 | 3_1:+1612370 | Msa0343460:CDS |
TTTCCAACTGAAACATGTAC+TGG | 0.492608 | 3_1:-1605986 | None:intergenic |
ATATGTACTAACCAAGTTGA+AGG | 0.494363 | 3_1:-1604174 | None:intergenic |
TACATTGAGTATGATAAAGA+TGG | 0.494921 | 3_1:-1603947 | None:intergenic |
TTTGATTGATGAAAACGGTA+TGG | 0.495426 | 3_1:-1611909 | None:intergenic |
TGGACTTCCAGTACACTTCA+GGG | 0.497027 | 3_1:-1604111 | None:intergenic |
CATTGGAGAGTTGGGAAGCA+TGG | 0.499468 | 3_1:-1610831 | None:intergenic |
AGTTTGTCACTTCCTTCCAC+AGG | 0.501409 | 3_1:+1606678 | Msa0343460:CDS |
GGAGTCAGAAAAGGGTATGA+AGG | 0.504252 | 3_1:+1611668 | Msa0343460:CDS |
TAGATGTTGGAGTCAGAAAA+GGG | 0.510160 | 3_1:+1611660 | Msa0343460:CDS |
GTCGCCCACCTTTGGTGGGT+CGG | 0.511973 | 3_1:+1609975 | Msa0343460:CDS |
TAAAGAGAAAGCAACAATGA+TGG | 0.512703 | 3_1:+1611619 | Msa0343460:CDS |
ATAAGTGAGTGTGAAGCAAA+TGG | 0.512865 | 3_1:+1612001 | Msa0343460:CDS |
GTCCATGTAAATGCAGGTAA+AGG | 0.517420 | 3_1:+1605887 | Msa0343460:CDS |
TCAGTGAATGTTGGCAAAGG+TGG | 0.519162 | 3_1:+1605800 | Msa0343460:CDS |
ACATCAGTAGATGTAGGAAA+AGG | 0.524408 | 3_1:+1605734 | Msa0343460:CDS |
ATCACTGATCTCCTTCAACT+TGG | 0.524728 | 3_1:+1604163 | Msa0343460:CDS |
TTAACTGCTGTCCCACCACC+TGG | 0.525860 | 3_1:-1605914 | None:intergenic |
TCAATTGCAGCTTGTGCTAG+TGG | 0.525904 | 3_1:+1610766 | Msa0343460:intron |
AGCAAGGGTGGTGTAGATGT+TGG | 0.526950 | 3_1:+1611647 | Msa0343460:CDS |
GGTGGAGTCCATGTTGATGC+AGG | 0.528311 | 3_1:+1605818 | Msa0343460:CDS |
ACAGCAGTTAATGTTGGAAA+AGG | 0.528543 | 3_1:+1605926 | Msa0343460:CDS |
TGTGAAGAAAATGGCATCAA+AGG | 0.529052 | 3_1:+1606286 | Msa0343460:CDS |
TTCCATCAAAGAAGGATCAA+AGG | 0.534638 | 3_1:+1611955 | Msa0343460:CDS |
CCTTAACATGTTCTCCATCA+AGG | 0.536982 | 3_1:+1606219 | Msa0343460:CDS |
AACAATGATGGATGTAAGCA+AGG | 0.541571 | 3_1:+1611631 | Msa0343460:CDS |
AAAGACACATCAGTAGATGT+AGG | 0.541615 | 3_1:+1605728 | Msa0343460:CDS |
TGACAAACTGGAACAGTCCC+AGG | 0.541759 | 3_1:-1606664 | None:intergenic |
GTTCATGCAGGAAAAGGAAG+AGG | 0.544075 | 3_1:+1605959 | Msa0343460:CDS |
AGTGAAAATTAAGATGATTG+AGG | 0.544171 | 3_1:-1603864 | None:intergenic |
AAACCAGTACATGTTTCAGT+TGG | 0.548855 | 3_1:+1605983 | Msa0343460:CDS |
GGTGGAACAGCAGTGAATGT+AGG | 0.550978 | 3_1:+1605854 | Msa0343460:CDS |
GTTTCCATCAACACATTCCA+AGG | 0.551219 | 3_1:-1612281 | None:intergenic |
ATGGTGTGTGAGGCCACTTA+GGG | 0.552741 | 3_1:+1603815 | Msa0343460:five_prime_UTR |
GGTTTCCGACCCACCAAAGG+TGG | 0.554295 | 3_1:-1609980 | None:intergenic |
GTTTACTATGTTGCTTTGGA+AGG | 0.555997 | 3_1:+1606544 | Msa0343460:CDS |
CAATTGCAGCTTGTGCTAGT+GGG | 0.557438 | 3_1:+1610767 | Msa0343460:intron |
ATTAGTCGCCCACCTTTGGT+GGG | 0.559579 | 3_1:+1609971 | Msa0343460:CDS |
CTCACACACCATTTATAGGA+AGG | 0.562402 | 3_1:-1603804 | None:intergenic |
GATGCAGGTAAAACAAAGCC+AGG | 0.566273 | 3_1:+1605833 | Msa0343460:CDS |
ACCGGTTTCCGACCCACCAA+AGG | 0.570553 | 3_1:-1609983 | None:intergenic |
ACAGCAGTGAATGTAGGAAA+AGG | 0.571281 | 3_1:+1605860 | Msa0343460:CDS |
GGTGGGACAGCAGTTAATGT+TGG | 0.572118 | 3_1:+1605920 | Msa0343460:CDS |
GGTAAAGGAAAACCAGGTGG+TGG | 0.575153 | 3_1:+1605902 | Msa0343460:CDS |
TAAATGACGAAATTCCATAG+TGG | 0.577590 | 3_1:-1603923 | None:intergenic |
GGTGGAGTCCATGTAAATGC+AGG | 0.578076 | 3_1:+1605881 | Msa0343460:CDS |
GCATGCCTCTACGCACAAGC+CGG | 0.580369 | 3_1:+1609948 | Msa0343460:CDS |
GCAGTTAATGTTGGAAAAGG+TGG | 0.580449 | 3_1:+1605929 | Msa0343460:CDS |
GTCAGAAAAGGGTATGAAGG+AGG | 0.580533 | 3_1:+1611671 | Msa0343460:CDS |
GGTGGTGTCAATGTTCATGC+AGG | 0.582435 | 3_1:+1605947 | Msa0343460:CDS |
TGACTTGCAAGAATATGTAA+TGG | 0.583650 | 3_1:+1606417 | Msa0343460:CDS |
TATTTGTCACATCCTCCCAC+AGG | 0.593098 | 3_1:+1612402 | Msa0343460:CDS |
TGTGAAGCAAATGGCATCAA+AGG | 0.593813 | 3_1:+1612010 | Msa0343460:CDS |
ACCTCAGTGAATGTTGGCAA+AGG | 0.595519 | 3_1:+1605797 | Msa0343460:CDS |
GGAGGAACCTCAGTGAATGT+TGG | 0.596804 | 3_1:+1605791 | Msa0343460:CDS |
AGAAAAGGGTATGAAGGAGG+TGG | 0.598378 | 3_1:+1611674 | Msa0343460:CDS |
ATAGAATGAAGATCCCTAAG+TGG | 0.600789 | 3_1:-1603828 | None:intergenic |
AACATGTTCTCCATCAAGGA+AGG | 0.601008 | 3_1:+1606223 | Msa0343460:CDS |
ACCCAAACAACATGATCCTG+TGG | 0.601894 | 3_1:-1612418 | None:intergenic |
GACTTCCAGTACACTTCAGG+GGG | 0.602058 | 3_1:-1604109 | None:intergenic |
AAGTGCTCAATGTTCAACCT+GGG | 0.607659 | 3_1:+1606647 | Msa0343460:CDS |
CTAATCCGGCTTGTGCGTAG+AGG | 0.609011 | 3_1:-1609953 | None:intergenic |
ATGAGCTTAAAGTTCAACCT+GGG | 0.610401 | 3_1:+1612371 | Msa0343460:CDS |
AAAGCATACAAGTAAAACAA+TGG | 0.611609 | 3_1:-1611731 | None:intergenic |
GCAGTGAATGTAGGAAAAGG+TGG | 0.612920 | 3_1:+1605863 | Msa0343460:CDS |
GTCACACTGATACATCAGAA+TGG | 0.617221 | 3_1:+1612326 | Msa0343460:CDS |
GACTTCCAGTAATACTGAGG+TGG | 0.619692 | 3_1:-1610809 | None:intergenic |
CTTCCTATAAATGGTGTGTG+AGG | 0.625916 | 3_1:+1603805 | Msa0343460:five_prime_UTR |
TCAGTAGATGTAGGAAAAGG+AGG | 0.627555 | 3_1:+1605737 | Msa0343460:CDS |
ACAATGATGGATGTAAGCAA+GGG | 0.630059 | 3_1:+1611632 | Msa0343460:CDS |
GGACTTCCAGTACACTTCAG+GGG | 0.632263 | 3_1:-1604110 | None:intergenic |
AAGTTGAAGGAGATCAGTGA+TGG | 0.634746 | 3_1:-1604161 | None:intergenic |
AGGGTGTAGAAGATCAGTAA+TGG | 0.639550 | 3_1:-1610861 | None:intergenic |
TCACACACCATTTATAGGAA+GGG | 0.640577 | 3_1:-1603803 | None:intergenic |
AAACAACATGATCCTGTGGA+AGG | 0.641220 | 3_1:-1606690 | None:intergenic |
AGAAAATGGCATCAAAGGAG+AGG | 0.642414 | 3_1:+1606291 | Msa0343460:CDS |
CCCAAACAACATGATCCTGT+GGG | 0.646890 | 3_1:-1612417 | None:intergenic |
ACCCAAACAACATGATCCTG+TGG | 0.647573 | 3_1:-1606694 | None:intergenic |
GGAATGTGTTGATGGAAACA+TGG | 0.651839 | 3_1:+1612285 | Msa0343460:CDS |
TTTCCATCAACACATTCCAA+GGG | 0.652000 | 3_1:-1612280 | None:intergenic |
TGACAAATAGGAATAGTCCC+AGG | 0.653522 | 3_1:-1612388 | None:intergenic |
AATGCAGGTAAAGGAAAACC+AGG | 0.656269 | 3_1:+1605896 | Msa0343460:CDS |
GTTTCCGACCCACCAAAGGT+GGG | 0.660140 | 3_1:-1609979 | None:intergenic |
GTAAAGGAAAACCAGGTGGT+GGG | 0.663031 | 3_1:+1605903 | Msa0343460:CDS |
ACCTTTGCCAACATTCACTG+AGG | 0.668754 | 3_1:-1605798 | None:intergenic |
ATGATGGATGTAAGCAAGGG+TGG | 0.681281 | 3_1:+1611635 | Msa0343460:CDS |
ATTACTGATCTTCTACACCC+TGG | 0.702960 | 3_1:+1610863 | Msa0343460:CDS |
GTCACACTGATACTTCACAA+TGG | 0.703629 | 3_1:+1606602 | Msa0343460:CDS |
AAACAACATGATCCTGTGGG+AGG | 0.704413 | 3_1:-1612414 | None:intergenic |
ATGGACTTCCAGTAATACTG+AGG | 0.710834 | 3_1:-1610812 | None:intergenic |
GCAGGTAAAACAAAGCCAGG+TGG | 0.716928 | 3_1:+1605836 | Msa0343460:CDS |
GCAGGTAAAGGAAAACCAGG+TGG | 0.762633 | 3_1:+1605899 | Msa0343460:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAGAAGATAATATATAAAT+AGG | + | chr3_1:1604520-1604539 | Msa0343460:intron | 10.0% |
!!! | ATTTTATCAAATAAAATGAA+CGG | + | chr3_1:1604699-1604718 | Msa0343460:intron | 10.0% |
!!! | AAAATATATTCTTTTTGAAA+GGG | - | chr3_1:1605430-1605449 | None:intergenic | 10.0% |
!!! | AAAAATATATTCTTTTTGAA+AGG | - | chr3_1:1605431-1605450 | None:intergenic | 10.0% |
!! | TATAGTGTTTATTAAATTTA+AGG | - | chr3_1:1606763-1606782 | None:intergenic | 10.0% |
!!! | CATATTTAAAATTTAGATTA+AGG | + | chr3_1:1607337-1607356 | Msa0343460:intron | 10.0% |
!!! | CAAAAAATATATTTTTTTAG+AGG | + | chr3_1:1609096-1609115 | Msa0343460:intron | 10.0% |
!! | TAAAAAGGAACTAAAATATT+AGG | - | chr3_1:1604004-1604023 | None:intergenic | 15.0% |
!! | ATAGTATATATAGTTATGAA+TGG | + | chr3_1:1604204-1604223 | Msa0343460:intron | 15.0% |
!! | TAAAGAAAAACTAAAGAAAT+TGG | + | chr3_1:1604422-1604441 | Msa0343460:intron | 15.0% |
!!! | TTTTATCAAATAAAATGAAC+GGG | + | chr3_1:1604700-1604719 | Msa0343460:intron | 15.0% |
!!! | TTCTTCTAAAAATAACTTAT+TGG | - | chr3_1:1604962-1604981 | None:intergenic | 15.0% |
!!! | ATTTAGAACCATATAATAAA+TGG | - | chr3_1:1605098-1605117 | None:intergenic | 15.0% |
!!! | TTTTGGAAATTTTCAAAAAA+TGG | + | chr3_1:1605590-1605609 | Msa0343460:intron | 15.0% |
!! | CATTGTTTAATTATGTTATA+TGG | + | chr3_1:1606833-1606852 | Msa0343460:intron | 15.0% |
!!! | TAAATTTTAAATATGCATAG+GGG | - | chr3_1:1607332-1607351 | None:intergenic | 15.0% |
!!! | CTAAATTTTAAATATGCATA+GGG | - | chr3_1:1607333-1607352 | None:intergenic | 15.0% |
!!! | TCTAAATTTTAAATATGCAT+AGG | - | chr3_1:1607334-1607353 | None:intergenic | 15.0% |
!! | AAACTCTATTATTTGATTAT+TGG | - | chr3_1:1607567-1607586 | None:intergenic | 15.0% |
!!! | TAATTATTTTATTTTCTGAG+AGG | - | chr3_1:1608914-1608933 | None:intergenic | 15.0% |
!!! | TGTTTGTTATAGATTTTTTA+AGG | + | chr3_1:1608990-1609009 | Msa0343460:intron | 15.0% |
!! | TAACAAAAAATTATTTGTCT+CGG | + | chr3_1:1609749-1609768 | Msa0343460:intron | 15.0% |
!!! | AGAGTTGTTTTTTTTTTTTT+TGG | - | chr3_1:1610016-1610035 | None:intergenic | 15.0% |
!!! | TTTTAAATAGTGTTTTTCAT+CGG | + | chr3_1:1610394-1610413 | Msa0343460:intron | 15.0% |
!! | AATTAAAATGGTTGAATTTA+TGG | - | chr3_1:1610642-1610661 | None:intergenic | 15.0% |
!! | TTTGAAGACATTAATTAAAA+TGG | - | chr3_1:1610654-1610673 | None:intergenic | 15.0% |
!! | CAATTAAAAACAGTAAATTA+TGG | - | chr3_1:1611583-1611602 | None:intergenic | 15.0% |
!!! | CATTTTTTGCAATCAAATTT+AGG | - | chr3_1:1604377-1604396 | None:intergenic | 20.0% |
!! | ACAAATTCTTCATAATGATA+AGG | - | chr3_1:1604501-1604520 | None:intergenic | 20.0% |
!! | AAACAAAAACATATTGAAGT+AGG | - | chr3_1:1604550-1604569 | None:intergenic | 20.0% |
!! | AATAAATTTATTGAAAAGCC+CGG | + | chr3_1:1604725-1604744 | Msa0343460:intron | 20.0% |
!! | AAAAAAAGTAACAAGGTTTA+TGG | - | chr3_1:1604803-1604822 | None:intergenic | 20.0% |
!! | ATGCAAAAAAAAAAGTAACA+AGG | - | chr3_1:1604810-1604829 | None:intergenic | 20.0% |
!!! | AATTTTTATTAAGCTCCTTA+AGG | + | chr3_1:1605056-1605075 | Msa0343460:intron | 20.0% |
!!! | ATTTTTATTAAGCTCCTTAA+GGG | + | chr3_1:1605057-1605076 | Msa0343460:intron | 20.0% |
!! | TAACATCACCATTTATTATA+TGG | + | chr3_1:1605087-1605106 | Msa0343460:intron | 20.0% |
!!! | ATGGATTAAAAAATATGACT+TGG | - | chr3_1:1605228-1605247 | None:intergenic | 20.0% |
!!! | GTCATATTTTTTAATCCATT+CGG | + | chr3_1:1605229-1605248 | Msa0343460:intron | 20.0% |
!!! | TCATATTTTTTAATCCATTC+GGG | + | chr3_1:1605230-1605249 | Msa0343460:intron | 20.0% |
!! | AAAATTTCCAAAAATGTAGA+AGG | - | chr3_1:1605583-1605602 | None:intergenic | 20.0% |
!!! | TTGAAAAGTTTTCAATTACT+TGG | - | chr3_1:1606722-1606741 | None:intergenic | 20.0% |
!! | TAAATTTAAGGATAATCCTA+TGG | - | chr3_1:1606751-1606770 | None:intergenic | 20.0% |
!! | CATATATAAGTAATACATCA+TGG | - | chr3_1:1606884-1606903 | None:intergenic | 20.0% |
!!! | CTTTAATTTCATTGTATTTG+AGG | + | chr3_1:1607017-1607036 | Msa0343460:intron | 20.0% |
!! | TAATACAAATGAACAATCAA+GGG | - | chr3_1:1607222-1607241 | None:intergenic | 20.0% |
!!! | TAATGTTTTAGTTTCTGTTA+GGG | - | chr3_1:1607290-1607309 | None:intergenic | 20.0% |
!! | TGATAACAAAAACTTTAAGT+TGG | + | chr3_1:1607363-1607382 | Msa0343460:intron | 20.0% |
!!! | AACTATTTCTTTTTATCGTT+TGG | - | chr3_1:1607502-1607521 | None:intergenic | 20.0% |
!!! | ATCTAAAACTTAGCTTAAAA+AGG | + | chr3_1:1607742-1607761 | Msa0343460:intron | 20.0% |
!! | ATCATTTCCCTATAATAAAA+GGG | + | chr3_1:1607983-1608002 | Msa0343460:intron | 20.0% |
!!! | AACATTTTGATCATTTTAAG+TGG | - | chr3_1:1608109-1608128 | None:intergenic | 20.0% |
!!! | TGTTAATTATTTTCCTAACT+AGG | - | chr3_1:1608170-1608189 | None:intergenic | 20.0% |
!!! | AGGAAAGTTTTTAATTTGAT+AGG | - | chr3_1:1608504-1608523 | None:intergenic | 20.0% |
!!! | TCCTAAATTTTAGAAGTAAA+GGG | - | chr3_1:1608582-1608601 | None:intergenic | 20.0% |
!!! | ATCCTAAATTTTAGAAGTAA+AGG | - | chr3_1:1608583-1608602 | None:intergenic | 20.0% |
!! | GGAAAAACTAATAATATTAG+CGG | - | chr3_1:1608893-1608912 | None:intergenic | 20.0% |
!! | TTTGCAATATCGATATTATT+AGG | + | chr3_1:1610311-1610330 | Msa0343460:intron | 20.0% |
!!! | ATTGAGATTTGAGATATTTT+AGG | - | chr3_1:1610362-1610381 | None:intergenic | 20.0% |
!! | TATCACTCATAGTTATATAA+AGG | + | chr3_1:1610462-1610481 | Msa0343460:intron | 20.0% |
!! | TGAGAAAGAAAAATGATATT+TGG | - | chr3_1:1611380-1611399 | None:intergenic | 20.0% |
!!! | TCATGAAAAGCATAATATTT+AGG | - | chr3_1:1612355-1612374 | None:intergenic | 20.0% |
! | AGTGAAAATTAAGATGATTG+AGG | - | chr3_1:1603867-1603886 | None:intergenic | 25.0% |
! | TAGTTAATCAATTTCCACTA+TGG | + | chr3_1:1603909-1603928 | Msa0343460:exon | 25.0% |
! | TACATTGAGTATGATAAAGA+TGG | - | chr3_1:1603950-1603969 | None:intergenic | 25.0% |
! | GGAACCAAAATAACAAAAAT+GGG | - | chr3_1:1604250-1604269 | None:intergenic | 25.0% |
! | AGGAACCAAAATAACAAAAA+TGG | - | chr3_1:1604251-1604270 | None:intergenic | 25.0% |
!!! | TTTTTTTTACCAGAGATGTT+AGG | - | chr3_1:1604271-1604290 | None:intergenic | 25.0% |
! | TATTGAATGACTTATGAGAT+AGG | + | chr3_1:1604297-1604316 | Msa0343460:intron | 25.0% |
! | TCATCATAGATGAATAACTA+AGG | + | chr3_1:1604592-1604611 | Msa0343460:intron | 25.0% |
!!! | ATAATTCCACATTTTAAGAC+CGG | - | chr3_1:1604747-1604766 | None:intergenic | 25.0% |
! | ATATCATCATATACAGAGAT+TGG | + | chr3_1:1604765-1604784 | Msa0343460:intron | 25.0% |
!! | CATTTAACCTTCTACATTTT+TGG | + | chr3_1:1605573-1605592 | Msa0343460:intron | 25.0% |
!!! | TTTTTTCACTTCTGTTGAAA+CGG | - | chr3_1:1606389-1606408 | None:intergenic | 25.0% |
!! | AACTTTTCAATTTCATCCAT+AGG | + | chr3_1:1606732-1606751 | Msa0343460:intron | 25.0% |
! | AATTATGTTATATGGTTCCA+AGG | + | chr3_1:1606841-1606860 | Msa0343460:intron | 25.0% |
!!! | TGTATTGTTTTGTTCAACTT+TGG | - | chr3_1:1607157-1607176 | None:intergenic | 25.0% |
! | TACAGAATGTAAAATGAATC+AGG | + | chr3_1:1607173-1607192 | Msa0343460:intron | 25.0% |
! | ACAGAATGTAAAATGAATCA+GGG | + | chr3_1:1607174-1607193 | Msa0343460:intron | 25.0% |
! | CTAATACAAATGAACAATCA+AGG | - | chr3_1:1607223-1607242 | None:intergenic | 25.0% |
!!! | AATGTTTTAGTTTCTGTTAG+GGG | - | chr3_1:1607289-1607308 | None:intergenic | 25.0% |
!!! | CTAATGTTTTAGTTTCTGTT+AGG | - | chr3_1:1607291-1607310 | None:intergenic | 25.0% |
! | CTAACAGAAACTAAAACATT+AGG | + | chr3_1:1607289-1607308 | Msa0343460:intron | 25.0% |
! | TTCATTGCTTAAAATAAGAG+TGG | - | chr3_1:1607457-1607476 | None:intergenic | 25.0% |
!! | GAAAATTTAAAGTACTCCTA+AGG | - | chr3_1:1607873-1607892 | None:intergenic | 25.0% |
!!! | AGGAGTACTTTAAATTTTCT+TGG | + | chr3_1:1607874-1607893 | Msa0343460:intron | 25.0% |
! | ATGATGTTTACATATAGTGA+CGG | - | chr3_1:1607968-1607987 | None:intergenic | 25.0% |
! | CATCATTTCCCTATAATAAA+AGG | + | chr3_1:1607982-1608001 | Msa0343460:intron | 25.0% |
! | AAAATGATCAAAATGTTGAG+CGG | + | chr3_1:1608112-1608131 | Msa0343460:intron | 25.0% |
! | TTCTAAGCAATTATGTAACT+TGG | - | chr3_1:1608193-1608212 | None:intergenic | 25.0% |
! | GTTACATAATTGCTTAGAAT+AGG | + | chr3_1:1608194-1608213 | Msa0343460:intron | 25.0% |
!!! | ATTGAGATGATCTTTGATTT+TGG | - | chr3_1:1608473-1608492 | None:intergenic | 25.0% |
!!! | CTAGTTTTCATATTTTCCTA+AGG | + | chr3_1:1608551-1608570 | Msa0343460:intron | 25.0% |
!!! | CCTAAATTTTAGAAGTAAAG+GGG | - | chr3_1:1608581-1608600 | None:intergenic | 25.0% |
!!! | TACTTCTAAAATTTAGGATC+AGG | + | chr3_1:1608584-1608603 | Msa0343460:intron | 25.0% |
!!! | ACTTCTAAAATTTAGGATCA+GGG | + | chr3_1:1608585-1608604 | Msa0343460:intron | 25.0% |
!!! | CTATTTCTACACCAAAAAAA+AGG | - | chr3_1:1608751-1608770 | None:intergenic | 25.0% |
! | CTAATATTGTATGTTTCAGA+GGG | + | chr3_1:1608841-1608860 | Msa0343460:intron | 25.0% |
! | TTTAGAGGAGAGAAAAAATA+AGG | + | chr3_1:1609111-1609130 | Msa0343460:intron | 25.0% |
! | TTAGAGGAGAGAAAAAATAA+GGG | + | chr3_1:1609112-1609131 | Msa0343460:intron | 25.0% |
! | AGATATATAGGAATCTACTT+GGG | - | chr3_1:1609447-1609466 | None:intergenic | 25.0% |
!!! | TATGTGACTGATTTTTTGTT+TGG | - | chr3_1:1609515-1609534 | None:intergenic | 25.0% |
!! | TTTTCAAAACCGATGTATTT+TGG | + | chr3_1:1609590-1609609 | Msa0343460:intron | 25.0% |
! | ATATGAGTTACTAATAGTTG+CGG | - | chr3_1:1609674-1609693 | None:intergenic | 25.0% |
! | CATTATGACTAATGTAGTAA+TGG | - | chr3_1:1609723-1609742 | None:intergenic | 25.0% |
! | TCTATTTAAACCAAGTTGTT+TGG | + | chr3_1:1609840-1609859 | Msa0343460:intron | 25.0% |
! | CTATTTAAACCAAGTTGTTT+GGG | + | chr3_1:1609841-1609860 | Msa0343460:intron | 25.0% |
! | TTCCTTATAATAATCAAGAC+CGG | - | chr3_1:1610194-1610213 | None:intergenic | 25.0% |
! | ATATTAATGAGAAGTTGAGA+TGG | - | chr3_1:1610509-1610528 | None:intergenic | 25.0% |
! | GCTAACGATTTATATATACT+TGG | - | chr3_1:1611172-1611191 | None:intergenic | 25.0% |
! | TGAGTTAAATAATAACGAGT+AGG | - | chr3_1:1611320-1611339 | None:intergenic | 25.0% |
!!! | ATGCAACTAGTTTTTAACTA+AGG | - | chr3_1:1611425-1611444 | None:intergenic | 25.0% |
! | AGTATTTGAAAGTTTAAGCA+TGG | + | chr3_1:1611486-1611505 | Msa0343460:intron | 25.0% |
!!! | TTACTGTTTTTAATTGAAGC+TGG | + | chr3_1:1611587-1611606 | Msa0343460:intron | 25.0% |
!!! | TTTTAATTGAAGCTGGATAT+TGG | + | chr3_1:1611594-1611613 | Msa0343460:intron | 25.0% |
! | AAGTAAAACAATGGAACAAA+TGG | - | chr3_1:1611725-1611744 | None:intergenic | 25.0% |
! | AAAGCATACAAGTAAAACAA+TGG | - | chr3_1:1611734-1611753 | None:intergenic | 25.0% |
! | TTGAAAAAAGATTTGCATCA+TGG | + | chr3_1:1611806-1611825 | Msa0343460:CDS | 25.0% |
! | TCCAATTTGATTGATGAAAA+CGG | - | chr3_1:1611917-1611936 | None:intergenic | 25.0% |
! | GATTTCACTATTTCAAAACT+CGG | + | chr3_1:1612073-1612092 | Msa0343460:intron | 25.0% |
! | GAAGTGGATAAAAATAGAAA+TGG | + | chr3_1:1612121-1612140 | Msa0343460:intron | 25.0% |
! | CAACAATATGTTATAGCAAA+AGG | + | chr3_1:1612148-1612167 | Msa0343460:CDS | 25.0% |
AACTATTCCCTTCCTATAAA+TGG | + | chr3_1:1603796-1603815 | Msa0343460:five_prime_UTR | 30.0% | |
TTCACTTACTACCATTTAGT+TGG | + | chr3_1:1603881-1603900 | Msa0343460:five_prime_UTR | 30.0% | |
TAAATGACGAAATTCCATAG+TGG | - | chr3_1:1603926-1603945 | None:intergenic | 30.0% | |
! | ATATGTACTAACCAAGTTGA+AGG | - | chr3_1:1604177-1604196 | None:intergenic | 30.0% |
! | AGTTATGAATGGAACACTTT+TGG | + | chr3_1:1604215-1604234 | Msa0343460:intron | 30.0% |
!!! | CACACCCATTTTTGTTATTT+TGG | + | chr3_1:1604243-1604262 | Msa0343460:intron | 30.0% |
CACGTGATAACTAAAGTATA+TGG | + | chr3_1:1604397-1604416 | Msa0343460:intron | 30.0% | |
GAAATTGGTCCAATTGATAA+AGG | + | chr3_1:1604437-1604456 | Msa0343460:intron | 30.0% | |
CTGACACATACATATTACAA+TGG | + | chr3_1:1604632-1604651 | Msa0343460:intron | 30.0% | |
!!! | TAATTCCACATTTTAAGACC+GGG | - | chr3_1:1604746-1604765 | None:intergenic | 30.0% |
!!! | TGTATTGTTTTGAAGTCCTT+TGG | - | chr3_1:1605033-1605052 | None:intergenic | 30.0% |
TTTGAATCACTGAATTGAAC+GGG | - | chr3_1:1605200-1605219 | None:intergenic | 30.0% | |
GTTTGAATCACTGAATTGAA+CGG | - | chr3_1:1605201-1605220 | None:intergenic | 30.0% | |
!!! | TTTTTTAATCCATTCGGGTT+CGG | + | chr3_1:1605235-1605254 | Msa0343460:intron | 30.0% |
TTGTGTCAATTCATCATCAT+AGG | - | chr3_1:1605675-1605694 | None:intergenic | 30.0% | |
CTATATATGAATGTGCAGAT+TGG | + | chr3_1:1605696-1605715 | Msa0343460:intron | 30.0% | |
GCAGCATAATTGTACAAAAA+TGG | - | chr3_1:1606019-1606038 | None:intergenic | 30.0% | |
!! | AGAAGAAAAGTGCTACATTA+GGG | - | chr3_1:1606066-1606085 | None:intergenic | 30.0% |
!! | AAGAAGAAAAGTGCTACATT+AGG | - | chr3_1:1606067-1606086 | None:intergenic | 30.0% |
! | AGCACTTTTCTTCTTAGAAA+AGG | + | chr3_1:1606072-1606091 | Msa0343460:CDS | 30.0% |
TTAGAAAAGGATTTGCATCA+AGG | + | chr3_1:1606085-1606104 | Msa0343460:CDS | 30.0% | |
! | TTTTGCATCATCATTTGAGT+TGG | - | chr3_1:1606140-1606159 | None:intergenic | 30.0% |
ACTGAATTAGCAACTTCTTT+AGG | - | chr3_1:1606169-1606188 | None:intergenic | 30.0% | |
TCAACTTTGCTTGAAGAAAA+AGG | - | chr3_1:1606193-1606212 | None:intergenic | 30.0% | |
ATAAGTGAGTGTGAAGAAAA+TGG | + | chr3_1:1606277-1606296 | Msa0343460:CDS | 30.0% | |
!! | AAAGTTTTGTGTGACATCAT+TGG | + | chr3_1:1606315-1606334 | Msa0343460:CDS | 30.0% |
! | TGACTTGCAAGAATATGTAA+TGG | + | chr3_1:1606417-1606436 | Msa0343460:CDS | 30.0% |
CAAGAATATGTAATGGCAAA+AGG | + | chr3_1:1606424-1606443 | Msa0343460:CDS | 30.0% | |
GACAGTAAAAAACTGCATAA+GGG | - | chr3_1:1606504-1606523 | None:intergenic | 30.0% | |
TGACAGTAAAAAACTGCATA+AGG | - | chr3_1:1606505-1606524 | None:intergenic | 30.0% | |
! | TGAAGTTTACTATGTTGCTT+TGG | + | chr3_1:1606540-1606559 | Msa0343460:CDS | 30.0% |
ACAATGGAATCCTAAACATT+TGG | + | chr3_1:1606618-1606637 | Msa0343460:CDS | 30.0% | |
ACTTGAAAAGCCAAATGTTT+AGG | - | chr3_1:1606631-1606650 | None:intergenic | 30.0% | |
TAAGTAATACATCATGGTCA+TGG | - | chr3_1:1606878-1606897 | None:intergenic | 30.0% | |
TGAATCGTTGCAAGTAATAT+TGG | + | chr3_1:1607072-1607091 | Msa0343460:intron | 30.0% | |
ACAGAAACTAAAACATTAGG+TGG | + | chr3_1:1607292-1607311 | Msa0343460:intron | 30.0% | |
!! | TTTAAGTTGGTTTCATGTGT+TGG | + | chr3_1:1607376-1607395 | Msa0343460:intron | 30.0% |
GCTTCACAAAAGAAAAATAG+AGG | + | chr3_1:1607630-1607649 | Msa0343460:intron | 30.0% | |
!!! | CTAAGTTTTAGATCTTTTGC+GGG | - | chr3_1:1607735-1607754 | None:intergenic | 30.0% |
!!! | GCTAAGTTTTAGATCTTTTG+CGG | - | chr3_1:1607736-1607755 | None:intergenic | 30.0% |
AATTGCTTCACTAAACTTTC+CGG | + | chr3_1:1608053-1608072 | Msa0343460:intron | 30.0% | |
TAAGCTTAACTCAATTGGTA+AGG | - | chr3_1:1608338-1608357 | None:intergenic | 30.0% | |
ATTCGTAAGCTTAACTCAAT+TGG | - | chr3_1:1608343-1608362 | None:intergenic | 30.0% | |
GTCTAAGAAAAGAAGGTTAA+AGG | - | chr3_1:1608524-1608543 | None:intergenic | 30.0% | |
!! | CCCCTTTACTTCTAAAATTT+AGG | + | chr3_1:1608578-1608597 | Msa0343460:intron | 30.0% |
!! | CTTCTAAAATTTAGGATCAG+GGG | + | chr3_1:1608586-1608605 | Msa0343460:intron | 30.0% |
! | GCTTAACATCTTTTCTACTT+TGG | - | chr3_1:1608626-1608645 | None:intergenic | 30.0% |
TAGGTGATTGTAATATTTGC+CGG | - | chr3_1:1608824-1608843 | None:intergenic | 30.0% | |
!! | CCTCTGAAACATACAATATT+AGG | - | chr3_1:1608843-1608862 | None:intergenic | 30.0% |
CCTAATATTGTATGTTTCAG+AGG | + | chr3_1:1608840-1608859 | Msa0343460:intron | 30.0% | |
AGAGAAAAAATAAGGGTCAA+AGG | + | chr3_1:1609119-1609138 | Msa0343460:intron | 30.0% | |
GAGATATATAGGAATCTACT+TGG | - | chr3_1:1609448-1609467 | None:intergenic | 30.0% | |
TAGATTCCTATATATCTCTC+TGG | + | chr3_1:1609450-1609469 | Msa0343460:intron | 30.0% | |
ACATTACCAGAGAGATATAT+AGG | - | chr3_1:1609459-1609478 | None:intergenic | 30.0% | |
CATACACATCCAAAATACAT+CGG | - | chr3_1:1609602-1609621 | None:intergenic | 30.0% | |
!! | GATGTATTTTGGATGTGTAT+GGG | + | chr3_1:1609601-1609620 | Msa0343460:intron | 30.0% |
TCAATTCAGTTCAGTTTATG+TGG | - | chr3_1:1609650-1609669 | None:intergenic | 30.0% | |
AATTTGTATGTCAAGCCTAA+AGG | + | chr3_1:1610128-1610147 | Msa0343460:intron | 30.0% | |
ATTTGTATGTCAAGCCTAAA+GGG | + | chr3_1:1610129-1610148 | Msa0343460:intron | 30.0% | |
TCCTTATAATAATCAAGACC+GGG | - | chr3_1:1610193-1610212 | None:intergenic | 30.0% | |
AAGTAATGATGTGAAAGAGA+TGG | - | chr3_1:1610595-1610614 | None:intergenic | 30.0% | |
!! | TCACATCATTACTTTTCTCA+TGG | + | chr3_1:1610601-1610620 | Msa0343460:intron | 30.0% |
CAATGCATTGTTATATACAG+AGG | - | chr3_1:1611011-1611030 | None:intergenic | 30.0% | |
GTTAAATAATAACGAGTAGG+AGG | - | chr3_1:1611317-1611336 | None:intergenic | 30.0% | |
CACATGTAAAGCATAAAAAC+TGG | - | chr3_1:1611357-1611376 | None:intergenic | 30.0% | |
TTTGAAAGTTTAAGCATGGA+AGG | + | chr3_1:1611490-1611509 | Msa0343460:intron | 30.0% | |
TAAAGAGAAAGCAACAATGA+TGG | + | chr3_1:1611619-1611638 | Msa0343460:CDS | 30.0% | |
GAGACAGCTTCAAATAATAA+TGG | + | chr3_1:1611854-1611873 | Msa0343460:CDS | 30.0% | |
! | ATGGAATTAGCAACTTTTCT+AGG | - | chr3_1:1611893-1611912 | None:intergenic | 30.0% |
TTTGATTGATGAAAACGGTA+TGG | - | chr3_1:1611912-1611931 | None:intergenic | 30.0% | |
! | ACCGTTTTCATCAATCAAAT+TGG | + | chr3_1:1611913-1611932 | Msa0343460:CDS | 30.0% |
! | AACAAGTTTTCCATCAAAGA+AGG | + | chr3_1:1611947-1611966 | Msa0343460:CDS | 30.0% |
!! | AAAGCTTTGAGTAACATCAT+TGG | + | chr3_1:1612039-1612058 | Msa0343460:intron | 30.0% |
AGTAACATCATTGGAATCTA+TGG | + | chr3_1:1612048-1612067 | Msa0343460:intron | 30.0% | |
AGCAAAAGGAGTGAAAAAAT+TGG | + | chr3_1:1612162-1612181 | Msa0343460:CDS | 30.0% | |
GCAAAAGGAGTGAAAAAATT+GGG | + | chr3_1:1612163-1612182 | Msa0343460:CDS | 30.0% | |
GACAGTAAAAAACTGCATAA+GGG | - | chr3_1:1606504-1606523 | None:intergenic | 30.0% | |
TGACAGTAAAAAACTGCATA+AGG | - | chr3_1:1606505-1606524 | None:intergenic | 30.0% | |
TCACACACCATTTATAGGAA+GGG | - | chr3_1:1603806-1603825 | None:intergenic | 35.0% | |
ATAGAATGAAGATCCCTAAG+TGG | - | chr3_1:1603831-1603850 | None:intergenic | 35.0% | |
TAACTAGAGCTCCAACTAAA+TGG | - | chr3_1:1603895-1603914 | None:intergenic | 35.0% | |
!!! | ATTTTGGTTCCTAACATCTC+TGG | + | chr3_1:1604259-1604278 | Msa0343460:intron | 35.0% |
TGGTCCAATTGATAAAGGTT+CGG | + | chr3_1:1604442-1604461 | Msa0343460:intron | 35.0% | |
TGAACCGAACCTTTATCAAT+TGG | - | chr3_1:1604449-1604468 | None:intergenic | 35.0% | |
ATCATATACAGAGATTGGAC+CGG | + | chr3_1:1604770-1604789 | Msa0343460:intron | 35.0% | |
CACTAATTATGCATGAGTCA+GGG | - | chr3_1:1604840-1604859 | None:intergenic | 35.0% | |
CTCATGCATAATTAGTGCAA+TGG | + | chr3_1:1604843-1604862 | Msa0343460:intron | 35.0% | |
TAGTGTTCGATAGAAACCAA+AGG | + | chr3_1:1605014-1605033 | Msa0343460:intron | 35.0% | |
GCTCATATGTGTATCCATTA+CGG | - | chr3_1:1605139-1605158 | None:intergenic | 35.0% | |
TGAGCCAAACTAGTACAATT+AGG | + | chr3_1:1605154-1605173 | Msa0343460:intron | 35.0% | |
CACTCCTAATTGTACTAGTT+TGG | - | chr3_1:1605161-1605180 | None:intergenic | 35.0% | |
TTGAATCACTGAATTGAACG+GGG | - | chr3_1:1605199-1605218 | None:intergenic | 35.0% | |
! | AAACCACTTCAAGTTTGAAC+GGG | - | chr3_1:1605267-1605286 | None:intergenic | 35.0% |
! | CAAACCACTTCAAGTTTGAA+CGG | - | chr3_1:1605268-1605287 | None:intergenic | 35.0% |
! | AAACCACTTCAAGTTTGAAC+GGG | - | chr3_1:1605267-1605286 | None:intergenic | 35.0% |
! | CAAACCACTTCAAGTTTGAA+CGG | - | chr3_1:1605268-1605287 | None:intergenic | 35.0% |
!! | AAACTTGAAGTGGTTTGCTT+TGG | + | chr3_1:1605271-1605290 | Msa0343460:intron | 35.0% |
!! | GCGTTGATTAAGGTTAAGTT+TGG | + | chr3_1:1605649-1605668 | Msa0343460:intron | 35.0% |
AAAGACACATCAGTAGATGT+AGG | + | chr3_1:1605728-1605747 | Msa0343460:CDS | 35.0% | |
ACATCAGTAGATGTAGGAAA+AGG | + | chr3_1:1605734-1605753 | Msa0343460:CDS | 35.0% | |
GATTCAGGAAAAACAAAACC+AGG | + | chr3_1:1605770-1605789 | Msa0343460:CDS | 35.0% | |
!! | TTGTTTTACCTGCATCAACA+TGG | - | chr3_1:1605829-1605848 | None:intergenic | 35.0% |
TTCCTTTACCTGCATTTACA+TGG | - | chr3_1:1605892-1605911 | None:intergenic | 35.0% | |
ACAGCAGTTAATGTTGGAAA+AGG | + | chr3_1:1605926-1605945 | Msa0343460:CDS | 35.0% | |
AAACCAGTACATGTTTCAGT+TGG | + | chr3_1:1605983-1606002 | Msa0343460:CDS | 35.0% | |
TTTCCAACTGAAACATGTAC+TGG | - | chr3_1:1605989-1606008 | None:intergenic | 35.0% | |
TGTGAAGAAAATGGCATCAA+AGG | + | chr3_1:1606286-1606305 | Msa0343460:CDS | 35.0% | |
TGTGACATCATTGGAATCTA+TGG | + | chr3_1:1606324-1606343 | Msa0343460:CDS | 35.0% | |
GATTTCACTACTTCGAAACT+TGG | + | chr3_1:1606349-1606368 | Msa0343460:CDS | 35.0% | |
! | GCAAAAGGTGTGAAGAAATT+GGG | + | chr3_1:1606439-1606458 | Msa0343460:CDS | 35.0% |
!! | GTTTACTATGTTGCTTTGGA+AGG | + | chr3_1:1606544-1606563 | Msa0343460:CDS | 35.0% |
TCATAAGGTTCAACTCAGTT+AGG | - | chr3_1:1607257-1607276 | None:intergenic | 35.0% | |
! | ACTGAGTTGAACCTTATGAT+AGG | + | chr3_1:1607258-1607277 | Msa0343460:intron | 35.0% |
! | AGTTAATTTTCCCGTCGTTA+GGG | - | chr3_1:1607601-1607620 | None:intergenic | 35.0% |
!! | TTCTTTTGTGAAGCACTATG+AGG | - | chr3_1:1607624-1607643 | None:intergenic | 35.0% |
TGATACTGAGAGATCAAGAT+AGG | - | chr3_1:1607685-1607704 | None:intergenic | 35.0% | |
TTGAGTAGTAGCAAATCCTT+AGG | + | chr3_1:1607854-1607873 | Msa0343460:intron | 35.0% | |
AACATGTATATCTCGCTTTG+AGG | + | chr3_1:1607908-1607927 | Msa0343460:intron | 35.0% | |
! | TGTTTACATATAGTGACGGA+GGG | - | chr3_1:1607964-1607983 | None:intergenic | 35.0% |
ATGTTTACATATAGTGACGG+AGG | - | chr3_1:1607965-1607984 | None:intergenic | 35.0% | |
! | CCAAGCACCCTTTTATTATA+GGG | - | chr3_1:1607993-1608012 | None:intergenic | 35.0% |
! | TCCAAGCACCCTTTTATTAT+AGG | - | chr3_1:1607994-1608013 | None:intergenic | 35.0% |
!! | ATAAAAGGGTGCTTGGATAT+AGG | + | chr3_1:1607997-1608016 | Msa0343460:intron | 35.0% |
!! | TAAAAGGGTGCTTGGATATA+GGG | + | chr3_1:1607998-1608017 | Msa0343460:intron | 35.0% |
CGAAATTACAGTATAGCAAC+CGG | - | chr3_1:1608075-1608094 | None:intergenic | 35.0% | |
! | ACTCTAAGAATTGCCTAGTT+AGG | + | chr3_1:1608154-1608173 | Msa0343460:intron | 35.0% |
TTGGTAAGGACGTTAAGTTT+GGG | - | chr3_1:1608324-1608343 | None:intergenic | 35.0% | |
ATTGGTAAGGACGTTAAGTT+TGG | - | chr3_1:1608325-1608344 | None:intergenic | 35.0% | |
TGAAGACAAACAACAAGCTA+AGG | - | chr3_1:1608390-1608409 | None:intergenic | 35.0% | |
CACTACAGTCTAAGAAAAGA+AGG | - | chr3_1:1608531-1608550 | None:intergenic | 35.0% | |
! | TAAAATTTAGGATCAGGGGT+GGG | + | chr3_1:1608590-1608609 | Msa0343460:intron | 35.0% |
ACCAAAAAAAAGGTCAGGTT+CGG | - | chr3_1:1608741-1608760 | None:intergenic | 35.0% | |
TCTACACCAAAAAAAAGGTC+AGG | - | chr3_1:1608746-1608765 | None:intergenic | 35.0% | |
GAATGCATTGTTACAATCAC+CGG | + | chr3_1:1608802-1608821 | Msa0343460:intron | 35.0% | |
TATGTTTCAGAGGGATTGTT+TGG | + | chr3_1:1608850-1608869 | Msa0343460:intron | 35.0% | |
TAATAATATTAGCGGTGAGC+CGG | - | chr3_1:1608885-1608904 | None:intergenic | 35.0% | |
ACTGCAAATGAGATGTGTAA+TGG | + | chr3_1:1609419-1609438 | Msa0343460:intron | 35.0% | |
TCATCAAACTCTGCTTACAT+CGG | + | chr3_1:1609481-1609500 | Msa0343460:intron | 35.0% | |
!! | CGATGTATTTTGGATGTGTA+TGG | + | chr3_1:1609600-1609619 | Msa0343460:intron | 35.0% |
!!! | TTTTTTTTTGGCTTTCGCAC+CGG | - | chr3_1:1610004-1610023 | None:intergenic | 35.0% |
CTTTCTCATACCACTAATGA+TGG | + | chr3_1:1610046-1610065 | Msa0343460:intron | 35.0% | |
!! | ACCACTAATGATGGATAACT+CGG | + | chr3_1:1610055-1610074 | Msa0343460:intron | 35.0% |
CTTATAATAATCAAGACCGG+GGG | - | chr3_1:1610191-1610210 | None:intergenic | 35.0% | |
CCTTATAATAATCAAGACCG+GGG | - | chr3_1:1610192-1610211 | None:intergenic | 35.0% | |
TCGGTGTACAAACCAAAAAA+AGG | + | chr3_1:1610413-1610432 | Msa0343460:intron | 35.0% | |
GTGATAGACACTTGAAACAA+AGG | - | chr3_1:1610448-1610467 | None:intergenic | 35.0% | |
AGTTGAGATGGAATGAAACA+AGG | - | chr3_1:1610497-1610516 | None:intergenic | 35.0% | |
TCAGCTTCACTAATCCAATA+TGG | + | chr3_1:1610565-1610584 | Msa0343460:intron | 35.0% | |
AAAGAGATGGAACTCCATAT+TGG | - | chr3_1:1610582-1610601 | None:intergenic | 35.0% | |
TATTTCCACCTCAGTATTAC+TGG | + | chr3_1:1610804-1610823 | Msa0343460:CDS | 35.0% | |
! | AGAAGATCAGTAATGGCTTT+TGG | - | chr3_1:1610857-1610876 | None:intergenic | 35.0% |
TTAGAGTATGATACTGACCA+GGG | - | chr3_1:1610883-1610902 | None:intergenic | 35.0% | |
! | TTTAGAGTATGATACTGACC+AGG | - | chr3_1:1610884-1610903 | None:intergenic | 35.0% |
AGAGCTTGAAGTTAAACATG+TGG | - | chr3_1:1610939-1610958 | None:intergenic | 35.0% | |
TCAAGCTCTATCAACGAAAT+TGG | + | chr3_1:1610950-1610969 | Msa0343460:intron | 35.0% | |
CAAGCTCTATCAACGAAATT+GGG | + | chr3_1:1610951-1610970 | Msa0343460:intron | 35.0% | |
!! | AACAATGATGGATGTAAGCA+AGG | + | chr3_1:1611631-1611650 | Msa0343460:CDS | 35.0% |
!! | ACAATGATGGATGTAAGCAA+GGG | + | chr3_1:1611632-1611651 | Msa0343460:CDS | 35.0% |
TAGATGTTGGAGTCAGAAAA+GGG | + | chr3_1:1611660-1611679 | Msa0343460:CDS | 35.0% | |
TTCCATCAAAGAAGGATCAA+AGG | + | chr3_1:1611955-1611974 | Msa0343460:CDS | 35.0% | |
TTCCTTTGATCCTTCTTTGA+TGG | - | chr3_1:1611960-1611979 | None:intergenic | 35.0% | |
ATAAGTGAGTGTGAAGCAAA+TGG | + | chr3_1:1612001-1612020 | Msa0343460:CDS | 35.0% | |
TTTCCATCAACACATTCCAA+GGG | - | chr3_1:1612283-1612302 | None:intergenic | 35.0% | |
ATGAGCTTAAAGTTCAACCT+GGG | + | chr3_1:1612371-1612390 | Msa0343460:CDS | 35.0% | |
CTCACACACCATTTATAGGA+AGG | - | chr3_1:1603807-1603826 | None:intergenic | 40.0% | |
CTTCCTATAAATGGTGTGTG+AGG | + | chr3_1:1603805-1603824 | Msa0343460:five_prime_UTR | 40.0% | |
AGGCACATGCTAGAATAGTT+TGG | - | chr3_1:1603984-1604003 | None:intergenic | 40.0% | |
!! | CATTTGAGTTGAGGGAAGTT+TGG | - | chr3_1:1604134-1604153 | None:intergenic | 40.0% |
!!! | GCTTTTGGCATTTGAGTTGA+GGG | - | chr3_1:1604142-1604161 | None:intergenic | 40.0% |
AAGTTGAAGGAGATCAGTGA+TGG | - | chr3_1:1604164-1604183 | None:intergenic | 40.0% | |
ATCACTGATCTCCTTCAACT+TGG | + | chr3_1:1604163-1604182 | Msa0343460:CDS | 40.0% | |
AAAAGCCCGGTCTTAAAATG+TGG | + | chr3_1:1604738-1604757 | Msa0343460:intron | 40.0% | |
GCACTAATTATGCATGAGTC+AGG | - | chr3_1:1604841-1604860 | None:intergenic | 40.0% | |
AACTGAGTATGTATCCGTCT+CGG | - | chr3_1:1604892-1604911 | None:intergenic | 40.0% | |
!! | GATGTTAACTTGTGCCCTTA+AGG | - | chr3_1:1605074-1605093 | None:intergenic | 40.0% |
AAGAGTCAAACACACCGTAA+TGG | + | chr3_1:1605122-1605141 | Msa0343460:intron | 40.0% | |
! | ACTTCAAGTTTGAACGGGTT+TGG | - | chr3_1:1605262-1605281 | None:intergenic | 40.0% |
AAACCCGTTCAAACTTGAAG+TGG | + | chr3_1:1605261-1605280 | Msa0343460:intron | 40.0% | |
! | ACTTCAAGTTTGAACGGGTT+TGG | - | chr3_1:1605262-1605281 | None:intergenic | 40.0% |
AAACCCGTTCAAACTTGAAG+TGG | + | chr3_1:1605261-1605280 | Msa0343460:intron | 40.0% | |
TTAATCAACGCGATGATGAG+CGG | - | chr3_1:1605640-1605659 | None:intergenic | 40.0% | |
TCAGTAGATGTAGGAAAAGG+AGG | + | chr3_1:1605737-1605756 | Msa0343460:CDS | 40.0% | |
TCAGGAAAAACAAAACCAGG+AGG | + | chr3_1:1605773-1605792 | Msa0343460:CDS | 40.0% | |
ACAGCAGTGAATGTAGGAAA+AGG | + | chr3_1:1605860-1605879 | Msa0343460:CDS | 40.0% | |
GTCCATGTAAATGCAGGTAA+AGG | + | chr3_1:1605887-1605906 | Msa0343460:CDS | 40.0% | |
AATGCAGGTAAAGGAAAACC+AGG | + | chr3_1:1605896-1605915 | Msa0343460:CDS | 40.0% | |
GCAGTTAATGTTGGAAAAGG+TGG | + | chr3_1:1605929-1605948 | Msa0343460:CDS | 40.0% | |
GTCAATGTTCATGCAGGAAA+AGG | + | chr3_1:1605953-1605972 | Msa0343460:CDS | 40.0% | |
CCTTGATGGAGAACATGTTA+AGG | - | chr3_1:1606222-1606241 | None:intergenic | 40.0% | |
CCTTAACATGTTCTCCATCA+AGG | + | chr3_1:1606219-1606238 | Msa0343460:CDS | 40.0% | |
AACATGTTCTCCATCAAGGA+AGG | + | chr3_1:1606223-1606242 | Msa0343460:CDS | 40.0% | |
TTCTTCTGTTCCTTCCTTGA+TGG | - | chr3_1:1606236-1606255 | None:intergenic | 40.0% | |
AGAAAATGGCATCAAAGGAG+AGG | + | chr3_1:1606291-1606310 | Msa0343460:CDS | 40.0% | |
! | GGCAAAAGGTGTGAAGAAAT+TGG | + | chr3_1:1606438-1606457 | Msa0343460:CDS | 40.0% |
GTCACACTGATACTTCACAA+TGG | + | chr3_1:1606602-1606621 | Msa0343460:CDS | 40.0% | |
AAGTGCTCAATGTTCAACCT+GGG | + | chr3_1:1606647-1606666 | Msa0343460:CDS | 40.0% | |
AAACAACATGATCCTGTGGA+AGG | - | chr3_1:1606693-1606712 | None:intergenic | 40.0% | |
TTCCACAGGATCATGTTGTT+TGG | + | chr3_1:1606692-1606711 | Msa0343460:CDS | 40.0% | |
! | TCCACAGGATCATGTTGTTT+GGG | + | chr3_1:1606693-1606712 | Msa0343460:CDS | 40.0% |
TCATGGACATACACAAACCT+TGG | - | chr3_1:1606861-1606880 | None:intergenic | 40.0% | |
GCAACGATTCAATACACTTG+CGG | - | chr3_1:1607063-1607082 | None:intergenic | 40.0% | |
GAGTTGAACCTTATGATAGG+TGG | + | chr3_1:1607261-1607280 | Msa0343460:intron | 40.0% | |
! | GAGTTAATTTTCCCGTCGTT+AGG | - | chr3_1:1607602-1607621 | None:intergenic | 40.0% |
!! | CTTTTGCGGGTTATGACTTT+TGG | - | chr3_1:1607722-1607741 | None:intergenic | 40.0% |
AAGTCGTAACCTTGTCACAT+AGG | + | chr3_1:1607770-1607789 | Msa0343460:intron | 40.0% | |
!! | CCCTATAATAAAAGGGTGCT+TGG | + | chr3_1:1607990-1608009 | Msa0343460:intron | 40.0% |
! | CTAAAATTTAGGATCAGGGG+TGG | + | chr3_1:1608589-1608608 | Msa0343460:intron | 40.0% |
!!! | ACCGAACCTGACCTTTTTTT+TGG | + | chr3_1:1608737-1608756 | Msa0343460:intron | 40.0% |
GATTGTTTGGCTACTATCAC+CGG | + | chr3_1:1608863-1608882 | Msa0343460:intron | 40.0% | |
! | GATGTGTATGGGTTACCATT+CGG | + | chr3_1:1609612-1609631 | Msa0343460:intron | 40.0% |
!! | GTTACCATTCGGTTCGTTTT+CGG | + | chr3_1:1609623-1609642 | Msa0343460:intron | 40.0% |
ACCGAGTTATCCATCATTAG+TGG | - | chr3_1:1610059-1610078 | None:intergenic | 40.0% | |
CTCAAAATGCATCTCCCTTT+AGG | - | chr3_1:1610146-1610165 | None:intergenic | 40.0% | |
! | GAAGTAATTTTGTACTCCCC+CGG | + | chr3_1:1610172-1610191 | Msa0343460:intron | 40.0% |
CCCCGGTCTTGATTATTATA+AGG | + | chr3_1:1610189-1610208 | Msa0343460:intron | 40.0% | |
ATGGACTTCCAGTAATACTG+AGG | - | chr3_1:1610815-1610834 | None:intergenic | 40.0% | |
! | TCAGTAATGGCTTTTGGCAT+TGG | - | chr3_1:1610851-1610870 | None:intergenic | 40.0% |
AGGGTGTAGAAGATCAGTAA+TGG | - | chr3_1:1610864-1610883 | None:intergenic | 40.0% | |
ATTACTGATCTTCTACACCC+TGG | + | chr3_1:1610863-1610882 | Msa0343460:CDS | 40.0% | |
CGAAATTGGGAGCAATAAGT+AGG | + | chr3_1:1610964-1610983 | Msa0343460:intron | 40.0% | |
TTCAGTTCAAACTCGTACGT+AGG | - | chr3_1:1611292-1611311 | None:intergenic | 40.0% | |
GTAGATGTTGGAGTCAGAAA+AGG | + | chr3_1:1611659-1611678 | Msa0343460:CDS | 40.0% | |
TGTGAAGCAAATGGCATCAA+AGG | + | chr3_1:1612010-1612029 | Msa0343460:CDS | 40.0% | |
! | TGAAGCTGTTTCAACAGAAG+TGG | + | chr3_1:1612105-1612124 | Msa0343460:intron | 40.0% |
GTTTCCATCAACACATTCCA+AGG | - | chr3_1:1612284-1612303 | None:intergenic | 40.0% | |
! | GGAATGTGTTGATGGAAACA+TGG | + | chr3_1:1612285-1612304 | Msa0343460:CDS | 40.0% |
GTCACACTGATACATCAGAA+TGG | + | chr3_1:1612326-1612345 | Msa0343460:CDS | 40.0% | |
CATGAGCTTAAAGTTCAACC+TGG | + | chr3_1:1612370-1612389 | Msa0343460:CDS | 40.0% | |
TGACAAATAGGAATAGTCCC+AGG | - | chr3_1:1612391-1612410 | None:intergenic | 40.0% | |
TGGCCTCACACACCATTTAT+AGG | - | chr3_1:1603811-1603830 | None:intergenic | 45.0% | |
TGGACTTCCAGTACACTTCA+GGG | - | chr3_1:1604114-1604133 | None:intergenic | 45.0% | |
TTGGACTTCCAGTACACTTC+AGG | - | chr3_1:1604115-1604134 | None:intergenic | 45.0% | |
!!! | GGCTTTTGGCATTTGAGTTG+AGG | - | chr3_1:1604143-1604162 | None:intergenic | 45.0% |
! | AGGAGATCAGTGATGGCTTT+TGG | - | chr3_1:1604157-1604176 | None:intergenic | 45.0% |
! | CAAGGTTTATGGCCTTGAAC+CGG | - | chr3_1:1604792-1604811 | None:intergenic | 45.0% |
ATTATGCATGAGTCAGGGCT+AGG | - | chr3_1:1604835-1604854 | None:intergenic | 45.0% | |
TTGAGTTATGCACACCGAGA+CGG | + | chr3_1:1604875-1604894 | Msa0343460:intron | 45.0% | |
TAATCAACGCGATGATGAGC+GGG | - | chr3_1:1605639-1605658 | None:intergenic | 45.0% | |
!! | GCTCATCATCGCGTTGATTA+AGG | + | chr3_1:1605639-1605658 | Msa0343460:intron | 45.0% |
!! | GGAGGTGTGAATGTTGATTC+AGG | + | chr3_1:1605755-1605774 | Msa0343460:CDS | 45.0% |
ACCTCAGTGAATGTTGGCAA+AGG | + | chr3_1:1605797-1605816 | Msa0343460:CDS | 45.0% | |
ACCTTTGCCAACATTCACTG+AGG | - | chr3_1:1605801-1605820 | None:intergenic | 45.0% | |
TCAGTGAATGTTGGCAAAGG+TGG | + | chr3_1:1605800-1605819 | Msa0343460:CDS | 45.0% | |
GATGCAGGTAAAACAAAGCC+AGG | + | chr3_1:1605833-1605852 | Msa0343460:CDS | 45.0% | |
GCAGTGAATGTAGGAAAAGG+TGG | + | chr3_1:1605863-1605882 | Msa0343460:CDS | 45.0% | |
GTAAAGGAAAACCAGGTGGT+GGG | + | chr3_1:1605903-1605922 | Msa0343460:CDS | 45.0% | |
GTTCATGCAGGAAAAGGAAG+AGG | + | chr3_1:1605959-1605978 | Msa0343460:CDS | 45.0% | |
!! | GTTGCTTTGGAAGGTGTTGA+TGG | + | chr3_1:1606553-1606572 | Msa0343460:CDS | 45.0% |
CAAGTGCTCAATGTTCAACC+TGG | + | chr3_1:1606646-1606665 | Msa0343460:CDS | 45.0% | |
TGTGGAAGGAAGTGACAAAC+TGG | - | chr3_1:1606679-1606698 | None:intergenic | 45.0% | |
! | AGTTTGTCACTTCCTTCCAC+AGG | + | chr3_1:1606678-1606697 | Msa0343460:CDS | 45.0% |
ACCCAAACAACATGATCCTG+TGG | - | chr3_1:1606697-1606716 | None:intergenic | 45.0% | |
CAGTCTTTCTGTTCGACACT+CGG | - | chr3_1:1607105-1607124 | None:intergenic | 45.0% | |
TAGGGGTTCCACCTATCATA+AGG | - | chr3_1:1607272-1607291 | None:intergenic | 45.0% | |
TCATCATGCATCCCTAACGA+CGG | + | chr3_1:1607587-1607606 | Msa0343460:intron | 45.0% | |
CCAACCTAGGAAACTTTCGT+TGG | - | chr3_1:1607658-1607677 | None:intergenic | 45.0% | |
CCAACGAAAGTTTCCTAGGT+TGG | + | chr3_1:1607655-1607674 | Msa0343460:intron | 45.0% | |
CAAGATAGGTGAACCAACCT+AGG | - | chr3_1:1607671-1607690 | None:intergenic | 45.0% | |
CGTAACCTTGTCACATAGGA+AGG | + | chr3_1:1607774-1607793 | Msa0343460:intron | 45.0% | |
GAGTACCTTCCTATGTGACA+AGG | - | chr3_1:1607782-1607801 | None:intergenic | 45.0% | |
AGCAGAATAGTTGTCTTGCC+AGG | - | chr3_1:1607826-1607845 | None:intergenic | 45.0% | |
! | ACGGAGGGAGTATATAGTCT+TGG | + | chr3_1:1608021-1608040 | Msa0343460:intron | 45.0% |
! | CGGAGGGAGTATATAGTCTT+GGG | + | chr3_1:1608022-1608041 | Msa0343460:intron | 45.0% |
!! | GAAGTAAAGGGGTGTTCCTT+AGG | - | chr3_1:1608570-1608589 | None:intergenic | 45.0% |
CAAACTCTGCTTACATCGGA+CGG | + | chr3_1:1609485-1609504 | Msa0343460:intron | 45.0% | |
!!! | AGGTGCATGCAGCCTTTTTT+TGG | - | chr3_1:1610428-1610447 | None:intergenic | 45.0% |
TCAATTGCAGCTTGTGCTAG+TGG | + | chr3_1:1610766-1610785 | Msa0343460:intron | 45.0% | |
CAATTGCAGCTTGTGCTAGT+GGG | + | chr3_1:1610767-1610786 | Msa0343460:intron | 45.0% | |
GACTTCCAGTAATACTGAGG+TGG | - | chr3_1:1610812-1610831 | None:intergenic | 45.0% | |
!! | GCTTTTGGCATTGGAGAGTT+GGG | - | chr3_1:1610842-1610861 | None:intergenic | 45.0% |
GGAGCAATAAGTAGGTGTCT+GGG | + | chr3_1:1610972-1610991 | Msa0343460:intron | 45.0% | |
GAGCAATAAGTAGGTGTCTG+GGG | + | chr3_1:1610973-1610992 | Msa0343460:intron | 45.0% | |
TGAGCATAGCTCAGTTGACA+TGG | - | chr3_1:1611035-1611054 | None:intergenic | 45.0% | |
TGTCAACTGAGCTATGCTCA+TGG | + | chr3_1:1611035-1611054 | Msa0343460:intron | 45.0% | |
GTCAACTGAGCTATGCTCAT+GGG | + | chr3_1:1611036-1611055 | Msa0343460:intron | 45.0% | |
!! | ATGATGGATGTAAGCAAGGG+TGG | + | chr3_1:1611635-1611654 | Msa0343460:CDS | 45.0% |
! | GGAGTCAGAAAAGGGTATGA+AGG | + | chr3_1:1611668-1611687 | Msa0343460:CDS | 45.0% |
! | GTCAGAAAAGGGTATGAAGG+AGG | + | chr3_1:1611671-1611690 | Msa0343460:CDS | 45.0% |
! | AGAAAAGGGTATGAAGGAGG+TGG | + | chr3_1:1611674-1611693 | Msa0343460:CDS | 45.0% |
AGCAAATGGCATCAAAGGTG+AGG | + | chr3_1:1612015-1612034 | Msa0343460:intron | 45.0% | |
TGAAGTTTACTCTGTGCCCT+TGG | + | chr3_1:1612264-1612283 | Msa0343460:CDS | 45.0% | |
TGTGGGAGGATGTGACAAAT+AGG | - | chr3_1:1612403-1612422 | None:intergenic | 45.0% | |
TATTTGTCACATCCTCCCAC+AGG | + | chr3_1:1612402-1612421 | Msa0343460:CDS | 45.0% | |
AAACAACATGATCCTGTGGG+AGG | - | chr3_1:1612417-1612436 | None:intergenic | 45.0% | |
TCCCACAGGATCATGTTGTT+TGG | + | chr3_1:1612416-1612435 | Msa0343460:CDS | 45.0% | |
CCCAAACAACATGATCCTGT+GGG | - | chr3_1:1606696-1606715 | None:intergenic | 45.0% | |
! | CCCACAGGATCATGTTGTTT+GGG | + | chr3_1:1612417-1612436 | Msa0343460:CDS | 45.0% |
ACCCAAACAACATGATCCTG+TGG | - | chr3_1:1606697-1606716 | None:intergenic | 45.0% | |
!! | TTATTTATGAAATAATAAAA+AGG | - | chr3_1:1604019-1604038 | None:intergenic | 5.0% |
!! | AAAATAAAAAATAAAATCTT+AGG | - | chr3_1:1604340-1604359 | None:intergenic | 5.0% |
!! | TAAATAATGAATTTAAATAA+TGG | - | chr3_1:1609335-1609354 | None:intergenic | 5.0% |
!!! | AAGTTTTTAAATATTATTTA+TGG | + | chr3_1:1611516-1611535 | Msa0343460:intron | 5.0% |
AATGGTGTGTGAGGCCACTT+AGG | + | chr3_1:1603814-1603833 | Msa0343460:five_prime_UTR | 50.0% | |
ATGGTGTGTGAGGCCACTTA+GGG | + | chr3_1:1603815-1603834 | Msa0343460:five_prime_UTR | 50.0% | |
GACTTCCAGTACACTTCAGG+GGG | - | chr3_1:1604112-1604131 | None:intergenic | 50.0% | |
GGACTTCCAGTACACTTCAG+GGG | - | chr3_1:1604113-1604132 | None:intergenic | 50.0% | |
! | ACAGAGATTGGACCGGTTCA+AGG | + | chr3_1:1604777-1604796 | Msa0343460:intron | 50.0% |
AACTCGAGTCGACCCTTTCA+CGG | + | chr3_1:1605322-1605341 | Msa0343460:intron | 50.0% | |
TTTGGACCGAACCCGTGAAA+GGG | - | chr3_1:1605337-1605356 | None:intergenic | 50.0% | |
ACATTCACTGAGGTTCCTCC+TGG | - | chr3_1:1605791-1605810 | None:intergenic | 50.0% | |
GGAGGAACCTCAGTGAATGT+TGG | + | chr3_1:1605791-1605810 | Msa0343460:CDS | 50.0% | |
GCAGGTAAAACAAAGCCAGG+TGG | + | chr3_1:1605836-1605855 | Msa0343460:CDS | 50.0% | |
ACATTCACTGCTGTTCCACC+TGG | - | chr3_1:1605854-1605873 | None:intergenic | 50.0% | |
GGTGGAACAGCAGTGAATGT+AGG | + | chr3_1:1605854-1605873 | Msa0343460:CDS | 50.0% | |
GGTGGAGTCCATGTAAATGC+AGG | + | chr3_1:1605881-1605900 | Msa0343460:CDS | 50.0% | |
GCAGGTAAAGGAAAACCAGG+TGG | + | chr3_1:1605899-1605918 | Msa0343460:CDS | 50.0% | |
GGTAAAGGAAAACCAGGTGG+TGG | + | chr3_1:1605902-1605921 | Msa0343460:CDS | 50.0% | |
GGTGGGACAGCAGTTAATGT+TGG | + | chr3_1:1605920-1605939 | Msa0343460:CDS | 50.0% | |
! | GGTGGTGTCAATGTTCATGC+AGG | + | chr3_1:1605947-1605966 | Msa0343460:CDS | 50.0% |
TGACAAACTGGAACAGTCCC+AGG | - | chr3_1:1606667-1606686 | None:intergenic | 50.0% | |
CATCATGCATCCCTAACGAC+GGG | + | chr3_1:1607588-1607607 | Msa0343460:intron | 50.0% | |
GGCTCCAACGAAAGTTTCCT+AGG | + | chr3_1:1607651-1607670 | Msa0343460:intron | 50.0% | |
TCGCGAGGTAAACAATTGCC+TGG | + | chr3_1:1607805-1607824 | Msa0343460:intron | 50.0% | |
! | AGGGTGCTTGGATATAGGGA+CGG | + | chr3_1:1608002-1608021 | Msa0343460:intron | 50.0% |
TGCTTGGATATAGGGACGGA+GGG | + | chr3_1:1608006-1608025 | Msa0343460:intron | 50.0% | |
! | AATTTAGGATCAGGGGTGGG+TGG | + | chr3_1:1608593-1608612 | Msa0343460:intron | 50.0% |
TGGACCGAAAACGAACCGAA+TGG | - | chr3_1:1609630-1609649 | None:intergenic | 50.0% | |
AATACCGGGTTCGATTCCCA+GGG | + | chr3_1:1609904-1609923 | Msa0343460:intron | 50.0% | |
ATTAGTCGCCCACCTTTGGT+GGG | + | chr3_1:1609971-1609990 | Msa0343460:CDS | 50.0% | |
CATTGGAGAGTTGGGAAGCA+TGG | - | chr3_1:1610834-1610853 | None:intergenic | 50.0% | |
!! | GGCTTTTGGCATTGGAGAGT+TGG | - | chr3_1:1610843-1610862 | None:intergenic | 50.0% |
GGGAGCAATAAGTAGGTGTC+TGG | + | chr3_1:1610971-1610990 | Msa0343460:intron | 50.0% | |
AGCAAGGGTGGTGTAGATGT+TGG | + | chr3_1:1611647-1611666 | Msa0343460:CDS | 50.0% | |
GTGCCCTTGGAATGTGTTGA+TGG | + | chr3_1:1612277-1612296 | Msa0343460:CDS | 50.0% | |
TTCAGGGGGTAAGGCAGCAT+GGG | - | chr3_1:1604098-1604117 | None:intergenic | 55.0% | |
CCAGTACACTTCAGGGGGTA+AGG | - | chr3_1:1604107-1604126 | None:intergenic | 55.0% | |
CCTTACCCCCTGAAGTGTAC+TGG | + | chr3_1:1604104-1604123 | Msa0343460:CDS | 55.0% | |
ACTCGAGTCGACCCTTTCAC+GGG | + | chr3_1:1605323-1605342 | Msa0343460:intron | 55.0% | |
AGTCGACCCTTTCACGGGTT+CGG | + | chr3_1:1605328-1605347 | Msa0343460:intron | 55.0% | |
GTTTGGACCGAACCCGTGAA+AGG | - | chr3_1:1605338-1605357 | None:intergenic | 55.0% | |
!! | CGATGATGAGCGGGTTGGTT+TGG | - | chr3_1:1605630-1605649 | None:intergenic | 55.0% |
GGTGGAGTCCATGTTGATGC+AGG | + | chr3_1:1605818-1605837 | Msa0343460:CDS | 55.0% | |
TTAACTGCTGTCCCACCACC+TGG | - | chr3_1:1605917-1605936 | None:intergenic | 55.0% | |
GTGCTTGGATATAGGGACGG+AGG | + | chr3_1:1608005-1608024 | Msa0343460:intron | 55.0% | |
CTCTGCTTACATCGGACGGT+CGG | + | chr3_1:1609489-1609508 | Msa0343460:intron | 55.0% | |
CCACTGGAGCCCAAACAACT+TGG | - | chr3_1:1609853-1609872 | None:intergenic | 55.0% | |
CCAAGTTGTTTGGGCTCCAG+TGG | + | chr3_1:1609850-1609869 | Msa0343460:intron | 55.0% | |
TTGTTTGGGCTCCAGTGGCA+AGG | + | chr3_1:1609855-1609874 | Msa0343460:intron | 55.0% | |
TGGCAAGGAGCTCCTTCCAA+GGG | + | chr3_1:1609870-1609889 | Msa0343460:intron | 55.0% | |
AATCGAACCCGGTATTCCCC+GGG | - | chr3_1:1609900-1609919 | None:intergenic | 55.0% | |
GAATCGAACCCGGTATTCCC+CGG | - | chr3_1:1609901-1609920 | None:intergenic | 55.0% | |
GAATACCGGGTTCGATTCCC+AGG | + | chr3_1:1609903-1609922 | Msa0343460:intron | 55.0% | |
ATACCGGGTTCGATTCCCAG+GGG | + | chr3_1:1609905-1609924 | Msa0343460:intron | 55.0% | |
! | CTAATCCGGCTTGTGCGTAG+AGG | - | chr3_1:1609956-1609975 | None:intergenic | 55.0% |
CCAAAGGTGGGCGACTAATC+CGG | - | chr3_1:1609970-1609989 | None:intergenic | 55.0% | |
! | GATTAGTCGCCCACCTTTGG+TGG | + | chr3_1:1609970-1609989 | Msa0343460:CDS | 55.0% |
GTTTCCGACCCACCAAAGGT+GGG | - | chr3_1:1609982-1610001 | None:intergenic | 55.0% | |
! | ACCTTTGGTGGGTCGGAAAC+CGG | + | chr3_1:1609982-1610001 | Msa0343460:CDS | 55.0% |
CTTCAGGGGGTAAGGCAGCA+TGG | - | chr3_1:1604099-1604118 | None:intergenic | 60.0% | |
GGGTTTGGACCGAACCCGAA+TGG | - | chr3_1:1605247-1605266 | None:intergenic | 60.0% | |
CAACGCGATGATGAGCGGGT+TGG | - | chr3_1:1605635-1605654 | None:intergenic | 60.0% | |
TGGAAGGAGCTCCTTGCCAC+TGG | - | chr3_1:1609869-1609888 | None:intergenic | 60.0% | |
GTGGCAAGGAGCTCCTTCCA+AGG | + | chr3_1:1609869-1609888 | Msa0343460:intron | 60.0% | |
TACCGGGTTCGATTCCCAGG+GGG | + | chr3_1:1609906-1609925 | Msa0343460:intron | 60.0% | |
TTCCCCCTGGGAATCGAACC+CGG | - | chr3_1:1609911-1609930 | None:intergenic | 60.0% | |
TTCCCAGGGGGAACAACGCT+TGG | + | chr3_1:1609918-1609937 | Msa0343460:intron | 60.0% | |
GCATGCCTCTACGCACAAGC+CGG | + | chr3_1:1609948-1609967 | Msa0343460:CDS | 60.0% | |
!! | CCGGATTAGTCGCCCACCTT+TGG | + | chr3_1:1609967-1609986 | Msa0343460:CDS | 60.0% |
GGTTTCCGACCCACCAAAGG+TGG | - | chr3_1:1609983-1610002 | None:intergenic | 60.0% | |
! | ACCGGTTTCCGACCCACCAA+AGG | - | chr3_1:1609986-1610005 | None:intergenic | 60.0% |
!! | AGGAAGGTACTCGCGTCGCG+AGG | + | chr3_1:1607790-1607809 | Msa0343460:intron | 65.0% |
! | GCTCCTTCCAAGGGCGTACC+CGG | + | chr3_1:1609879-1609898 | Msa0343460:intron | 65.0% |
! | CTCCTTCCAAGGGCGTACCC+GGG | + | chr3_1:1609880-1609899 | Msa0343460:intron | 65.0% |
! | TCCTTCCAAGGGCGTACCCG+GGG | + | chr3_1:1609881-1609900 | Msa0343460:intron | 65.0% |
GTATTCCCCGGGTACGCCCT+TGG | - | chr3_1:1609889-1609908 | None:intergenic | 65.0% | |
AGGGCGTACCCGGGGAATAC+CGG | + | chr3_1:1609889-1609908 | Msa0343460:intron | 65.0% | |
! | GGCCAAGCGTTGTTCCCCCT+GGG | - | chr3_1:1609923-1609942 | None:intergenic | 65.0% |
! | TGGCCAAGCGTTGTTCCCCC+TGG | - | chr3_1:1609924-1609943 | None:intergenic | 65.0% |
! | GTGCGTAGAGGCATGCGCAC+TGG | - | chr3_1:1609944-1609963 | None:intergenic | 65.0% |
! | GTCGCCCACCTTTGGTGGGT+CGG | + | chr3_1:1609975-1609994 | Msa0343460:CDS | 65.0% |
TCCCCGGGTACGCCCTTGGA+AGG | - | chr3_1:1609885-1609904 | None:intergenic | 70.0% | |
GGGCGTACCCGGGGAATACC+GGG | + | chr3_1:1609890-1609909 | Msa0343460:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 1603784 | 1612450 | 1603784 | ID=Msa0343460;Name=Msa0343460 |
chr3_1 | mRNA | 1603784 | 1612450 | 1603784 | ID=Msa0343460-mRNA-1;Parent=Msa0343460;Name=Msa0343460-mRNA-1;_AED=0.29;_eAED=0.29;_QI=144|0.33|0.28|0.85|1|1|7|0|698 |
chr3_1 | exon | 1603784 | 1603966 | 1603784 | ID=Msa0343460-mRNA-1:exon:521;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1604079 | 1604184 | 1604079 | ID=Msa0343460-mRNA-1:exon:522;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1605714 | 1606722 | 1605714 | ID=Msa0343460-mRNA-1:exon:523;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1609925 | 1610003 | 1609925 | ID=Msa0343460-mRNA-1:exon:524;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1610776 | 1610884 | 1610776 | ID=Msa0343460-mRNA-1:exon:525;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1611606 | 1612031 | 1611606 | ID=Msa0343460-mRNA-1:exon:526;Parent=Msa0343460-mRNA-1 |
chr3_1 | exon | 1612122 | 1612450 | 1612122 | ID=Msa0343460-mRNA-1:exon:527;Parent=Msa0343460-mRNA-1 |
chr3_1 | five_prime_UTR | 1603784 | 1603927 | 1603784 | ID=Msa0343460-mRNA-1:five_prime_utr;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1603928 | 1603966 | 1603928 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1604079 | 1604184 | 1604079 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1605714 | 1606722 | 1605714 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1609925 | 1610003 | 1609925 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1610776 | 1610884 | 1610776 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1611606 | 1612031 | 1611606 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
chr3_1 | CDS | 1612122 | 1612450 | 1612122 | ID=Msa0343460-mRNA-1:cds;Parent=Msa0343460-mRNA-1 |
Gene Sequence |
Protein sequence |