AlfalfaGEDB | Msa0387180

M. sativa cultivar zhongmu-4 / Msa0387180

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0387180	XP_003601750.1	99.237	131	0	1	1	131	1	130	6.99e-86	256

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0387180	G7JBE6	99.237	131	0	1	1	131	1	130	3.34e-86	256

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000610	Msa0387180	-0.806492	8.012930e-50	-8.615850e-47
Msa0025060	Msa0387180	-0.851384	9.193225e-61	-8.615850e-47
Msa0025090	Msa0387180	-0.816758	4.689482e-52	-8.615850e-47
Msa0029010	Msa0387180	0.805256	1.457057e-49	-8.615850e-47
Msa0030320	Msa0387180	-0.834380	3.099139e-56	-8.615850e-47
Msa0036560	Msa0387180	-0.813223	2.854287e-51	-8.615850e-47
Msa0060740	Msa0387180	-0.813201	2.885343e-51	-8.615850e-47
Msa0072590	Msa0387180	-0.815562	8.675085e-52	-8.615850e-47
Msa0076640	Msa0387180	0.804623	1.976095e-49	-8.615850e-47
Msa0077920	Msa0387180	-0.820146	8.002910e-53	-8.615850e-47
Msa0089410	Msa0387180	-0.823487	1.348902e-53	-8.615850e-47
Msa0099090	Msa0387180	-0.815587	8.566909e-52	-8.615850e-47
Msa0112800	Msa0387180	-0.800730	1.256657e-48	-8.615850e-47
Msa0120310	Msa0387180	-0.803235	3.840041e-49	-8.615850e-47
Msa0125810	Msa0387180	-0.811477	6.865930e-51	-8.615850e-47
Msa0136520	Msa0387180	-0.846508	2.079031e-59	-8.615850e-47
Msa0139280	Msa0387180	-0.819370	1.203635e-52	-8.615850e-47
Msa0143360	Msa0387180	-0.815225	1.030927e-51	-8.615850e-47
Msa0151810	Msa0387180	-0.805049	1.610555e-49	-8.615850e-47
Msa0153290	Msa0387180	-0.809583	1.761525e-50	-8.615850e-47
Msa0155500	Msa0387180	-0.829378	5.324471e-55	-8.615850e-47
Msa0166580	Msa0387180	-0.804775	1.837306e-49	-8.615850e-47
Msa0176610	Msa0387180	-0.834616	2.704468e-56	-8.615850e-47
Msa0183960	Msa0387180	-0.800656	1.301236e-48	-8.615850e-47
Msa0187820	Msa0387180	-0.866802	2.183644e-65	-8.615850e-47
Msa0192890	Msa0387180	0.815697	8.093479e-52	-8.615850e-47
Msa0198140	Msa0387180	-0.807249	5.543986e-50	-8.615850e-47
Msa0198220	Msa0387180	-0.804636	1.964479e-49	-8.615850e-47
Msa0201910	Msa0387180	-0.813579	2.382827e-51	-8.615850e-47
Msa0207220	Msa0387180	-0.800481	1.412558e-48	-8.615850e-47
Msa0219140	Msa0387180	-0.803918	2.771727e-49	-8.615850e-47
Msa0221880	Msa0387180	-0.814679	1.362238e-51	-8.615850e-47
Msa0232170	Msa0387180	-0.822189	2.706579e-53	-8.615850e-47
Msa0369660	Msa0387180	0.836366	9.758972e-57	-8.615850e-47
Msa0372450	Msa0387180	-0.807154	5.804663e-50	-8.615850e-47
Msa0384220	Msa0387180	0.811569	6.558015e-51	-8.615850e-47
Msa0387180	Msa0421690	0.921055	5.843027e-88	-8.615850e-47
Msa0387180	Msa0451370	-0.827876	1.228184e-54	-8.615850e-47
Msa0387180	Msa0453310	-0.812844	3.455162e-51	-8.615850e-47
Msa0387180	Msa0463890	0.833055	6.642418e-56	-8.615850e-47
Msa0387180	Msa0468050	0.935357	9.630275e-97	-8.615850e-47
Msa0387180	Msa0482360	0.823830	1.121498e-53	-8.615850e-47
Msa0387180	Msa0486210	-0.814035	1.891172e-51	-8.615850e-47
Msa0387180	Msa0512820	-0.801221	9.973073e-49	-8.615850e-47
Msa0387180	Msa0525940	-0.831852	1.319397e-55	-8.615850e-47
Msa0387180	Msa0563230	-0.821301	4.343135e-53	-8.615850e-47
Msa0387180	Msa0577640	0.802130	6.491622e-49	-8.615850e-47
Msa0387180	Msa0577730	0.807588	4.698018e-50	-8.615850e-47
Msa0387180	Msa0587060	-0.807833	4.166178e-50	-8.615850e-47
Msa0387180	Msa0604130	-0.816904	4.348852e-52	-8.615850e-47
Msa0387180	Msa0617470	-0.815705	8.062158e-52	-8.615850e-47
Msa0387180	Msa0619670	0.805197	1.499254e-49	-8.615850e-47
Msa0387180	Msa0636750	-0.815331	9.763339e-52	-8.615850e-47
Msa0387180	Msa0636760	-0.808871	2.503145e-50	-8.615850e-47
Msa0387180	Msa0646180	-0.806305	8.772391e-50	-8.615850e-47
Msa0387180	Msa0665010	-0.814456	1.526918e-51	-8.615850e-47
Msa0387180	Msa0684910	-0.820165	7.922177e-53	-8.615850e-47
Msa0387180	Msa0684920	-0.807940	3.953768e-50	-8.615850e-47
Msa0387180	Msa0700250	-0.822641	2.125180e-53	-8.615850e-47
Msa0387180	Msa0714930	-0.805750	1.148189e-49	-8.615850e-47
Msa0387180	Msa0721260	0.800686	1.283044e-48	-8.615850e-47
Msa0387180	Msa0743630	-0.844252	8.479715e-59	-8.615850e-47
Msa0387180	Msa0753410	0.814464	1.520078e-51	-8.615850e-47
Msa0387180	Msa0795330	0.809352	1.974078e-50	-8.615850e-47
Msa0387180	Msa0801630	-0.811818	5.788003e-51	-8.615850e-47
Msa0387180	Msa0824750	-0.807081	6.015335e-50	-8.615850e-47
Msa0387180	Msa0863780	-0.837122	6.260871e-57	-8.615850e-47
Msa0387180	Msa0882340	-0.805804	1.118639e-49	-8.615850e-47
Msa0387180	Msa0933050	-0.800093	1.694064e-48	-8.615850e-47
Msa0387180	Msa0947420	0.811846	5.706879e-51	-8.615850e-47
Msa0387180	Msa0982340	0.895842	6.526420e-76	-8.615850e-47
Msa0387180	Msa0998900	-0.868061	8.639446e-66	-8.615850e-47
Msa0387180	Msa1022300	-0.803197	3.910046e-49	-8.615850e-47
Msa0387180	Msa1025650	-0.811525	6.704261e-51	-8.615850e-47
Msa0387180	Msa1034870	0.843392	1.441765e-58	-8.615850e-47
Msa0387180	Msa1038420	-0.803139	4.019260e-49	-8.615850e-47
Msa0387180	Msa1042380	-0.816104	6.567089e-52	-8.615850e-47
Msa0387180	Msa1074910	0.837146	6.174236e-57	-8.615850e-47
Msa0387180	Msa1081650	-0.817610	3.016385e-52	-8.615850e-47
Msa0387180	Msa1106570	-0.817422	3.325810e-52	-8.615850e-47
Msa0387180	Msa1129130	-0.817566	3.085830e-52	-8.615850e-47
Msa0387180	Msa1129470	-0.818218	2.198064e-52	-8.615850e-47
Msa0387180	Msa1153260	-0.802827	4.664094e-49	-8.615850e-47
Msa0387180	Msa1157200	0.801507	8.716855e-49	-8.615850e-47
Msa0387180	Msa1174450	0.800414	1.457356e-48	-8.615850e-47
Msa0387180	Msa1177360	-0.812325	4.487811e-51	-8.615850e-47
Msa0387180	Msa1192790	-0.823333	1.465438e-53	-8.615850e-47
Msa0387180	Msa1203210	-0.820293	7.405218e-53	-8.615850e-47
Msa0387180	Msa1207000	0.860249	2.355498e-63	-8.615850e-47
Msa0387180	Msa1207090	0.845525	3.846402e-59	-8.615850e-47
Msa0387180	Msa1211280	-0.818268	2.141929e-52	-8.615850e-47
Msa0387180	Msa1252220	-0.804089	2.553692e-49	-8.615850e-47
Msa0387180	Msa1257170	0.881022	3.390243e-70	-8.615850e-47
Msa0387180	Msa1258600	0.880693	4.448725e-70	-8.615850e-47
Msa0387180	Msa1260240	-0.835820	1.343325e-56	-8.615850e-47
Msa0387180	Msa1275920	-0.806283	8.870125e-50	-8.615850e-47
Msa0387180	Msa1295840	-0.823485	1.350787e-53	-8.615850e-47
Msa0387180	Msa1298440	0.879211	1.500022e-69	-8.615850e-47
Msa0387180	Msa1299920	-0.812123	4.966718e-51	-8.615850e-47
Msa0387180	Msa1302120	0.859016	5.533900e-63	-8.615850e-47
Msa0387180	Msa1304980	0.805027	1.627249e-49	-8.615850e-47
Msa0387180	Msa1309050	0.812762	3.602045e-51	-8.615850e-47
Msa0387180	Msa1314810	0.807256	5.524709e-50	-8.615850e-47
Msa0387180	Msa1326900	-0.814825	1.264518e-51	-8.615850e-47
Msa0387180	Msa1327400	-0.826484	2.645585e-54	-8.615850e-47
Msa0387180	Msa1327420	-0.824420	8.148996e-54	-8.615850e-47
Msa0387180	Msa1329820	-0.819984	8.715390e-53	-8.615850e-47
Msa0387180	Msa1344870	-0.817956	2.519585e-52	-8.615850e-47
Msa0387180	Msa1359880	-0.802571	5.267217e-49	-8.615850e-47
Msa0387180	Msa1372470	-0.803685	3.098627e-49	-8.615850e-47
Msa0387180	Msa1395700	-0.825141	5.511203e-54	-8.615850e-47
Msa0387180	Msa1397550	-0.848727	5.098074e-60	-8.615850e-47
Msa0387180	Msa1398110	0.800091	1.695536e-48	-8.615850e-47
Msa0387180	Msa1400940	0.882005	1.496325e-70	-8.615850e-47
Msa0387180	Msa1413880	-0.812672	3.767578e-51	-8.615850e-47
Msa0387180	Msa1414790	-0.816093	6.603977e-52	-8.615850e-47
Msa0387180	Msa1434850	-0.808243	3.408859e-50	-8.615850e-47
Msa0387180	Msa1459930	0.805249	1.462365e-49	-8.615850e-47
Msa0244370	Msa0387180	-0.816788	4.615388e-52	-8.615850e-47
Msa0263470	Msa0387180	-0.832609	8.572031e-56	-8.615850e-47
Msa0282880	Msa0387180	-0.819580	1.078193e-52	-8.615850e-47
Msa0288280	Msa0387180	-0.812100	5.024706e-51	-8.615850e-47
Msa0310260	Msa0387180	-0.810503	1.115791e-50	-8.615850e-47
Msa0313680	Msa0387180	0.810226	1.280497e-50	-8.615850e-47
Msa0321180	Msa0387180	-0.813509	2.469018e-51	-8.615850e-47
Msa0321200	Msa0387180	-0.815006	1.153394e-51	-8.615850e-47
Msa0324390	Msa0387180	-0.808585	2.881636e-50	-8.615850e-47
Msa0338610	Msa0387180	-0.832651	8.370910e-56	-8.615850e-47
Msa0343200	Msa0387180	-0.800726	1.258831e-48	-8.615850e-47
Msa0357090	Msa0387180	-0.819575	1.080839e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0387180	MtrunA17_Chr3g0122261	99.237	131	0	1	1	131	1	130	6.43e-90	256
Msa0387180	MtrunA17_Chr8g0377531	53.957	139	49	5	1	131	82	213	4.58e-41	135
Msa0387180	MtrunA17_Chr5g0434711	88.235	68	8	0	15	82	4	71	7.06e-37	120
Msa0387180	MtrunA17_Chr7g0224931	37.500	128	61	3	1	109	21	148	7.11e-17	72.4
Msa0387180	MtrunA17_Chr7g0224971	37.500	128	61	3	1	109	21	148	7.11e-17	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0387180	AT1G27290.2	56.944	144	47	2	1	131	1	142	6.52e-51	158
Msa0387180	AT1G27290.1	56.944	144	47	2	1	131	1	142	6.52e-51	158

Find 76 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCTCTTTGCATTACAAAT+AGG	0.200673	3_1:+91090406	Msa0387180:three_prime_UTR
GGATCGGTCACGTTCTTTAT+TGG	0.225023	3_1:+91089389	Msa0387180:CDS
GAATGGATAAAGTTGAAAAT+TGG	0.229504	3_1:-91089028	None:intergenic
GTAACCTTGCATCTAATAAA+AGG	0.231552	3_1:-91090365	None:intergenic
ATAATTGAAATCTTAATATT+AGG	0.243021	3_1:+91090490	Msa0387180:three_prime_UTR
ATATAACAATTTCCACATTA+TGG	0.259950	3_1:+91090331	Msa0387180:three_prime_UTR
TCTGCTTCTGGGAATTTCTA+TGG	0.268697	3_1:+91089352	Msa0387180:CDS
CTATGTTTATGTTTATGTTT+AGG	0.293675	3_1:-91089129	None:intergenic
CTTTGATTTCTTTCTCCAAT+TGG	0.306057	3_1:-91090268	None:intergenic
GTGGGTTATTGGATTGATTA+TGG	0.317283	3_1:+91089427	Msa0387180:CDS
ATCTCTTTGCATTACAAATA+GGG	0.322428	3_1:+91090407	Msa0387180:three_prime_UTR
TAAGTAAAACAACTTATAAC+AGG	0.330511	3_1:-91090458	None:intergenic
ATTATGGTTCTCTATGTTGC+TGG	0.354926	3_1:+91089443	Msa0387180:CDS
CCGCGTAAAGATTCTATTCC+AGG	0.361280	3_1:+91089536	Msa0387180:CDS
AAATTGGGATTGACTGAGTT+TGG	0.366889	3_1:-91089012	None:intergenic
AATGGATAAAGTTGAAAATT+GGG	0.368376	3_1:-91089027	None:intergenic
ATGAGATAAAATAAAGTGTT+GGG	0.371291	3_1:-91088969	None:intergenic
TTCTGTTCTCTGTTATATCA+TGG	0.373629	3_1:+91089496	Msa0387180:CDS
TTCTTCTCATCATCTTGTCT+TGG	0.387442	3_1:-91089169	None:intergenic
AAGAGAAGGAAAATATGATT+TGG	0.392654	3_1:+91090572	Msa0387180:three_prime_UTR
GAAAATATGATTTGGCTCAT+TGG	0.398671	3_1:+91090580	Msa0387180:three_prime_UTR
TCTTTACGCGGCGGTGGCTC+CGG	0.404881	3_1:-91089524	None:intergenic
CGGTTGCTCCGGTGGATGAT+TGG	0.416801	3_1:-91089282	None:intergenic
GTTACCACTCTCTCTGATAT+AGG	0.444657	3_1:+91089470	Msa0387180:CDS
GAGAAATTTAACGGCGTTGG+TGG	0.453775	3_1:-91089260	None:intergenic
CGCCGTAACGGTTGCTCCGG+TGG	0.458989	3_1:-91089290	None:intergenic
AGCAGAGAGGCAAAACCCGC+AGG	0.469362	3_1:-91089335	None:intergenic
GGTTGAGAAGGATTGCAGAT+AGG	0.472984	3_1:-91089226	None:intergenic
GGATGATTGGAGAAATTTAA+CGG	0.478874	3_1:-91089269	None:intergenic
AACTTATAACAGGGGAAGGA+GGG	0.490173	3_1:-91090448	None:intergenic
AAGCTAATGTGAGTACCAAT+TGG	0.492910	3_1:+91090253	Msa0387180:exon
TTGGAGAAATTTAACGGCGT+TGG	0.502757	3_1:-91089263	None:intergenic
ATAGAATCTTTACGCGGCGG+TGG	0.505827	3_1:-91089530	None:intergenic
CTGTTATATCATGGCGGCGC+CGG	0.507370	3_1:+91089505	Msa0387180:CDS
TTGGGATTGACTGAGTTTGG+TGG	0.511014	3_1:-91089009	None:intergenic
AATGAGATAAAATAAAGTGT+TGG	0.511437	3_1:-91088970	None:intergenic
GAGTTTGGTGGAAAGAAGAA+TGG	0.513029	3_1:-91088997	None:intergenic
GGAGAAAGAAATCAAAGATA+CGG	0.526823	3_1:+91090274	Msa0387180:three_prime_UTR
TTAACGGCGTTGGTGGTGAA+CGG	0.531777	3_1:-91089253	None:intergenic
GGCTCTGATGCTCTGTGGAT+CGG	0.537627	3_1:+91089373	Msa0387180:CDS
GTGAACGGAGGAGGTTGAGA+AGG	0.548099	3_1:-91089238	None:intergenic
GCGTTGGTGGTGAACGGAGG+AGG	0.549273	3_1:-91089247	None:intergenic
CCACCTCAAATCTCACCTGC+GGG	0.549426	3_1:+91089320	Msa0387180:CDS
ACTTATAACAGGGGAAGGAG+GGG	0.552523	3_1:-91090447	None:intergenic
AAACGCCGTAACGGTTGCTC+CGG	0.554974	3_1:-91089293	None:intergenic
CAACTTATAACAGGGGAAGG+AGG	0.563841	3_1:-91090449	None:intergenic
AAACCCGCAGGTGAGATTTG+AGG	0.566480	3_1:-91089323	None:intergenic
ATCCACCGGAGCAACCGTTA+CGG	0.568881	3_1:+91089288	Msa0387180:CDS
CTTATAACAGGGGAAGGAGG+GGG	0.570781	3_1:-91090446	None:intergenic
AAATTTCTCCAATCATCCAC+CGG	0.571678	3_1:+91089274	Msa0387180:CDS
GAGAAGGAAGCTCCATAATG+TGG	0.580065	3_1:-91090343	None:intergenic
ATTGGGAGAAACGAGGCGAA+TGG	0.581574	3_1:-91089045	None:intergenic
TTGCATCTAATAAAAGGAGA+AGG	0.585689	3_1:-91090359	None:intergenic
AAACAACTTATAACAGGGGA+AGG	0.591367	3_1:-91090452	None:intergenic
TGAGATAAAATAAAGTGTTG+GGG	0.593110	3_1:-91088968	None:intergenic
GGTGGAGGTAAACGCCGTAA+CGG	0.594940	3_1:-91089302	None:intergenic
TATCATAAACTATAAAGAGA+AGG	0.595855	3_1:+91090558	Msa0387180:three_prime_UTR
GCAGGTGAGATTTGAGGTGG+AGG	0.603112	3_1:-91089317	None:intergenic
GATAAAATAAAGTGTTGGGG+GGG	0.607293	3_1:-91088965	None:intergenic
CCCGCAGGTGAGATTTGAGG+TGG	0.619368	3_1:-91089320	None:intergenic
GAGATAAAATAAAGTGTTGG+GGG	0.625884	3_1:-91088967	None:intergenic
AGATAAAATAAAGTGTTGGG+GGG	0.628391	3_1:-91088966	None:intergenic
TCTATGGCTCTGATGCTCTG+TGG	0.628501	3_1:+91089368	Msa0387180:CDS
TCCACCTCAAATCTCACCTG+CGG	0.630396	3_1:+91089319	Msa0387180:CDS
ACGACCTATATCAGAGAGAG+TGG	0.640005	3_1:-91089474	None:intergenic
AAGTAAAACAACTTATAACA+GGG	0.642019	3_1:-91090457	None:intergenic
ACGGCGTTGGTGGTGAACGG+AGG	0.653070	3_1:-91089250	None:intergenic
AGGGTTTATTGGGAGAAACG+AGG	0.660421	3_1:-91089052	None:intergenic
ATAATCAATCCAATAACCCA+CGG	0.673735	3_1:-91089425	None:intergenic
TGTTCTCTGTTATATCATGG+CGG	0.675392	3_1:+91089499	Msa0387180:CDS
AGTAAAACAACTTATAACAG+GGG	0.686424	3_1:-91090456	None:intergenic
TGATAAGCAGAGCAGCGAGG+TGG	0.699742	3_1:-91088926	None:intergenic
AGAAATTCCCAGAAGCAGAG+AGG	0.703569	3_1:-91089348	None:intergenic
CCTGGAATAGAATCTTTACG+CGG	0.704020	3_1:-91089536	None:intergenic
GGAATAGAATCTTTACGCGG+CGG	0.733807	3_1:-91089533	None:intergenic
GAATGATAAGCAGAGCAGCG+AGG	0.754887	3_1:-91088929	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAGATAACAAAAATTTAAA+CGG	+	chr3_1:91089559-91089578	Msa0387180:intron	10.0%
!!	ATAATTGAAATCTTAATATT+AGG	+	chr3_1:91090490-91090509	Msa0387180:three_prime_UTR	10.0%
!!	TAAGATAACAAAAATTTAAA+CGG	+	chr3_1:91089559-91089578	Msa0387180:intron	10.0%
!!	ATAATTGAAATCTTAATATT+AGG	+	chr3_1:91090490-91090509	Msa0387180:three_prime_UTR	10.0%
!!	AAGAAGAAAAAAAAGATTAA+GGG	-	chr3_1:91089074-91089093	None:intergenic	15.0%
!!	TCTATATACATAATGTATTA+AGG	-	chr3_1:91090063-91090082	None:intergenic	15.0%
!!	AAGAAGAAAAAAAAGATTAA+GGG	-	chr3_1:91089074-91089093	None:intergenic	15.0%
!!	TCTATATACATAATGTATTA+AGG	-	chr3_1:91090063-91090082	None:intergenic	15.0%
!!!	ATGAGATAAAATAAAGTGTT+GGG	-	chr3_1:91088972-91088991	None:intergenic	20.0%
!!	AATGAGATAAAATAAAGTGT+TGG	-	chr3_1:91088973-91088992	None:intergenic	20.0%
!!	AATGGATAAAGTTGAAAATT+GGG	-	chr3_1:91089030-91089049	None:intergenic	20.0%
!!	AAAAAGATTAAGGGTTTATT+GGG	-	chr3_1:91089065-91089084	None:intergenic	20.0%
!!	AAAAAAGATTAAGGGTTTAT+TGG	-	chr3_1:91089066-91089085	None:intergenic	20.0%
!!	GAAGAAGAAAAAAAAGATTA+AGG	-	chr3_1:91089075-91089094	None:intergenic	20.0%
!!	CTATGTTTATGTTTATGTTT+AGG	-	chr3_1:91089132-91089151	None:intergenic	20.0%
!!!	TAAATTTTTGTTATCTTACC+TGG	-	chr3_1:91089557-91089576	None:intergenic	20.0%
!!!	TTTCAAATTTTCCAAAGAAA+TGG	+	chr3_1:91089795-91089814	Msa0387180:intron	20.0%
!!!	TTCAAATTTTCCAAAGAAAT+GGG	+	chr3_1:91089796-91089815	Msa0387180:intron	20.0%
!!	TAGTAATGAACTAAATGTTT+AGG	+	chr3_1:91089997-91090016	Msa0387180:intron	20.0%
!!	AATGCATACATATATCTTAA+TGG	-	chr3_1:91090024-91090043	None:intergenic	20.0%
!!!	TACATAATGTATTAAGGTTT+TGG	-	chr3_1:91090057-91090076	None:intergenic	20.0%
!!	ACTACTCAAAATTTATTGTT+TGG	+	chr3_1:91090125-91090144	Msa0387180:intron	20.0%
!!!	TAGGACAACATTTTTTTTAA+GGG	-	chr3_1:91090161-91090180	None:intergenic	20.0%
!!	ATATAACAATTTCCACATTA+TGG	+	chr3_1:91090331-91090350	Msa0387180:three_prime_UTR	20.0%
!!	AAGTAAAACAACTTATAACA+GGG	-	chr3_1:91090460-91090479	None:intergenic	20.0%
!!	TAAGTAAAACAACTTATAAC+AGG	-	chr3_1:91090461-91090480	None:intergenic	20.0%
!!!	TATGTTTTAAACTGAACAAA+AGG	-	chr3_1:91090528-91090547	None:intergenic	20.0%
!!	TATCATAAACTATAAAGAGA+AGG	+	chr3_1:91090558-91090577	Msa0387180:three_prime_UTR	20.0%
!!!	ATGAGATAAAATAAAGTGTT+GGG	-	chr3_1:91088972-91088991	None:intergenic	20.0%
!!	AATGAGATAAAATAAAGTGT+TGG	-	chr3_1:91088973-91088992	None:intergenic	20.0%
!!	AATGGATAAAGTTGAAAATT+GGG	-	chr3_1:91089030-91089049	None:intergenic	20.0%
!!	AAAAAGATTAAGGGTTTATT+GGG	-	chr3_1:91089065-91089084	None:intergenic	20.0%
!!	AAAAAAGATTAAGGGTTTAT+TGG	-	chr3_1:91089066-91089085	None:intergenic	20.0%
!!	GAAGAAGAAAAAAAAGATTA+AGG	-	chr3_1:91089075-91089094	None:intergenic	20.0%
!!	CTATGTTTATGTTTATGTTT+AGG	-	chr3_1:91089132-91089151	None:intergenic	20.0%
!!!	TAAATTTTTGTTATCTTACC+TGG	-	chr3_1:91089557-91089576	None:intergenic	20.0%
!!!	TTTCAAATTTTCCAAAGAAA+TGG	+	chr3_1:91089795-91089814	Msa0387180:intron	20.0%
!!!	TTCAAATTTTCCAAAGAAAT+GGG	+	chr3_1:91089796-91089815	Msa0387180:intron	20.0%
!!	TAGTAATGAACTAAATGTTT+AGG	+	chr3_1:91089997-91090016	Msa0387180:intron	20.0%
!!	AATGCATACATATATCTTAA+TGG	-	chr3_1:91090024-91090043	None:intergenic	20.0%
!!!	TACATAATGTATTAAGGTTT+TGG	-	chr3_1:91090057-91090076	None:intergenic	20.0%
!!	ACTACTCAAAATTTATTGTT+TGG	+	chr3_1:91090125-91090144	Msa0387180:intron	20.0%
!!!	TAGGACAACATTTTTTTTAA+GGG	-	chr3_1:91090161-91090180	None:intergenic	20.0%
!!	ATATAACAATTTCCACATTA+TGG	+	chr3_1:91090331-91090350	Msa0387180:three_prime_UTR	20.0%
!!	AAGTAAAACAACTTATAACA+GGG	-	chr3_1:91090460-91090479	None:intergenic	20.0%
!!	TAAGTAAAACAACTTATAAC+AGG	-	chr3_1:91090461-91090480	None:intergenic	20.0%
!!!	TATGTTTTAAACTGAACAAA+AGG	-	chr3_1:91090528-91090547	None:intergenic	20.0%
!!	TATCATAAACTATAAAGAGA+AGG	+	chr3_1:91090558-91090577	Msa0387180:three_prime_UTR	20.0%
!!!	TGAGATAAAATAAAGTGTTG+GGG	-	chr3_1:91088971-91088990	None:intergenic	25.0%
!	GAATGGATAAAGTTGAAAAT+TGG	-	chr3_1:91089031-91089050	None:intergenic	25.0%
!!!	TTTGTCTTTTGTTTCGTATT+TGG	+	chr3_1:91089614-91089633	Msa0387180:intron	25.0%
!	AAACAAGTATGAGACAAAAA+AGG	-	chr3_1:91089649-91089668	None:intergenic	25.0%
!	GTTGTTCAATGATTTAACAA+AGG	+	chr3_1:91089669-91089688	Msa0387180:intron	25.0%
!!	TTTTCTTTCTTTTTCTGTGT+TGG	+	chr3_1:91089747-91089766	Msa0387180:intron	25.0%
!!	TTTCTTTCTTTTTCTGTGTT+GGG	+	chr3_1:91089748-91089767	Msa0387180:intron	25.0%
!!!	CTAGGACAACATTTTTTTTA+AGG	-	chr3_1:91090162-91090181	None:intergenic	25.0%
!	AATCTCTTTGCATTACAAAT+AGG	+	chr3_1:91090406-91090425	Msa0387180:three_prime_UTR	25.0%
!	ATCTCTTTGCATTACAAATA+GGG	+	chr3_1:91090407-91090426	Msa0387180:three_prime_UTR	25.0%
!	AGTAAAACAACTTATAACAG+GGG	-	chr3_1:91090459-91090478	None:intergenic	25.0%
!	AAGAGAAGGAAAATATGATT+TGG	+	chr3_1:91090572-91090591	Msa0387180:three_prime_UTR	25.0%
!!!	TGAGATAAAATAAAGTGTTG+GGG	-	chr3_1:91088971-91088990	None:intergenic	25.0%
!	GAATGGATAAAGTTGAAAAT+TGG	-	chr3_1:91089031-91089050	None:intergenic	25.0%
!!!	TTTGTCTTTTGTTTCGTATT+TGG	+	chr3_1:91089614-91089633	Msa0387180:intron	25.0%
!	AAACAAGTATGAGACAAAAA+AGG	-	chr3_1:91089649-91089668	None:intergenic	25.0%
!	GTTGTTCAATGATTTAACAA+AGG	+	chr3_1:91089669-91089688	Msa0387180:intron	25.0%
!!	TTTTCTTTCTTTTTCTGTGT+TGG	+	chr3_1:91089747-91089766	Msa0387180:intron	25.0%
!!	TTTCTTTCTTTTTCTGTGTT+GGG	+	chr3_1:91089748-91089767	Msa0387180:intron	25.0%
!!!	CTAGGACAACATTTTTTTTA+AGG	-	chr3_1:91090162-91090181	None:intergenic	25.0%
!	AATCTCTTTGCATTACAAAT+AGG	+	chr3_1:91090406-91090425	Msa0387180:three_prime_UTR	25.0%
!	ATCTCTTTGCATTACAAATA+GGG	+	chr3_1:91090407-91090426	Msa0387180:three_prime_UTR	25.0%
!	AGTAAAACAACTTATAACAG+GGG	-	chr3_1:91090459-91090478	None:intergenic	25.0%
!	AAGAGAAGGAAAATATGATT+TGG	+	chr3_1:91090572-91090591	Msa0387180:three_prime_UTR	25.0%
!!	AGATAAAATAAAGTGTTGGG+GGG	-	chr3_1:91088969-91088988	None:intergenic	30.0%
!!	GAGATAAAATAAAGTGTTGG+GGG	-	chr3_1:91088970-91088989	None:intergenic	30.0%
	GGATGATTGGAGAAATTTAA+CGG	-	chr3_1:91089272-91089291	None:intergenic	30.0%
	ATAATCAATCCAATAACCCA+CGG	-	chr3_1:91089428-91089447	None:intergenic	30.0%
	TTCTGTTCTCTGTTATATCA+TGG	+	chr3_1:91089496-91089515	Msa0387180:CDS	30.0%
!	GGATGCAAATTGATATGTTT+TGG	+	chr3_1:91089817-91089836	Msa0387180:intron	30.0%
	AGCGAAAATCGAACATATTT+GGG	-	chr3_1:91089850-91089869	None:intergenic	30.0%
	TGGTTTGATCATAAAAGACA+AGG	+	chr3_1:91089952-91089971	Msa0387180:intron	30.0%
	TTAAGCCACACATGATAAAA+GGG	-	chr3_1:91090205-91090224	None:intergenic	30.0%
	ATTAAGCCACACATGATAAA+AGG	-	chr3_1:91090206-91090225	None:intergenic	30.0%
!	CTTTGATTTCTTTCTCCAAT+TGG	-	chr3_1:91090271-91090290	None:intergenic	30.0%
	GGAGAAAGAAATCAAAGATA+CGG	+	chr3_1:91090274-91090293	Msa0387180:three_prime_UTR	30.0%
	TTGCATCTAATAAAAGGAGA+AGG	-	chr3_1:91090362-91090381	None:intergenic	30.0%
!	TTCTCCTTTTATTAGATGCA+AGG	+	chr3_1:91090361-91090380	Msa0387180:three_prime_UTR	30.0%
	GTAACCTTGCATCTAATAAA+AGG	-	chr3_1:91090368-91090387	None:intergenic	30.0%
!	TGCAAGGTTACTAAATTTTG+TGG	+	chr3_1:91090377-91090396	Msa0387180:three_prime_UTR	30.0%
!	GAAAATATGATTTGGCTCAT+TGG	+	chr3_1:91090580-91090599	Msa0387180:three_prime_UTR	30.0%
!!	AGATAAAATAAAGTGTTGGG+GGG	-	chr3_1:91088969-91088988	None:intergenic	30.0%
!!	GAGATAAAATAAAGTGTTGG+GGG	-	chr3_1:91088970-91088989	None:intergenic	30.0%
	GGATGATTGGAGAAATTTAA+CGG	-	chr3_1:91089272-91089291	None:intergenic	30.0%
	ATAATCAATCCAATAACCCA+CGG	-	chr3_1:91089428-91089447	None:intergenic	30.0%
	TTCTGTTCTCTGTTATATCA+TGG	+	chr3_1:91089496-91089515	Msa0387180:CDS	30.0%
!	GGATGCAAATTGATATGTTT+TGG	+	chr3_1:91089817-91089836	Msa0387180:intron	30.0%
	AGCGAAAATCGAACATATTT+GGG	-	chr3_1:91089850-91089869	None:intergenic	30.0%
	TGGTTTGATCATAAAAGACA+AGG	+	chr3_1:91089952-91089971	Msa0387180:intron	30.0%
	TTAAGCCACACATGATAAAA+GGG	-	chr3_1:91090205-91090224	None:intergenic	30.0%
	ATTAAGCCACACATGATAAA+AGG	-	chr3_1:91090206-91090225	None:intergenic	30.0%
!	CTTTGATTTCTTTCTCCAAT+TGG	-	chr3_1:91090271-91090290	None:intergenic	30.0%
	GGAGAAAGAAATCAAAGATA+CGG	+	chr3_1:91090274-91090293	Msa0387180:three_prime_UTR	30.0%
	TTGCATCTAATAAAAGGAGA+AGG	-	chr3_1:91090362-91090381	None:intergenic	30.0%
!	TTCTCCTTTTATTAGATGCA+AGG	+	chr3_1:91090361-91090380	Msa0387180:three_prime_UTR	30.0%
	GTAACCTTGCATCTAATAAA+AGG	-	chr3_1:91090368-91090387	None:intergenic	30.0%
!	TGCAAGGTTACTAAATTTTG+TGG	+	chr3_1:91090377-91090396	Msa0387180:three_prime_UTR	30.0%
!	GAAAATATGATTTGGCTCAT+TGG	+	chr3_1:91090580-91090599	Msa0387180:three_prime_UTR	30.0%
!!	GATAAAATAAAGTGTTGGGG+GGG	-	chr3_1:91088968-91088987	None:intergenic	35.0%
	AAATTGGGATTGACTGAGTT+TGG	-	chr3_1:91089015-91089034	None:intergenic	35.0%
	TTCTTCTCATCATCTTGTCT+TGG	-	chr3_1:91089172-91089191	None:intergenic	35.0%
	AAATTTCTCCAATCATCCAC+CGG	+	chr3_1:91089274-91089293	Msa0387180:CDS	35.0%
!	GTGGGTTATTGGATTGATTA+TGG	+	chr3_1:91089427-91089446	Msa0387180:CDS	35.0%
	ATTATGGTTCTCTATGTTGC+TGG	+	chr3_1:91089443-91089462	Msa0387180:CDS	35.0%
	TGTTCTCTGTTATATCATGG+CGG	+	chr3_1:91089499-91089518	Msa0387180:CDS	35.0%
!	TTTCTTTTTCTGTGTTGGGT+TGG	+	chr3_1:91089752-91089771	Msa0387180:intron	35.0%
	CAATTTGCATCCCATTTCTT+TGG	-	chr3_1:91089809-91089828	None:intergenic	35.0%
	GCGAAAATCGAACATATTTG+GGG	-	chr3_1:91089849-91089868	None:intergenic	35.0%
	CAGCGAAAATCGAACATATT+TGG	-	chr3_1:91089851-91089870	None:intergenic	35.0%
!	TATGTTCGATTTTCGCTGAA+TGG	+	chr3_1:91089853-91089872	Msa0387180:intron	35.0%
!	ATGTTCGATTTTCGCTGAAT+GGG	+	chr3_1:91089854-91089873	Msa0387180:intron	35.0%
!!	GGTCTTGTTTCTTCATCAAA+TGG	+	chr3_1:91089875-91089894	Msa0387180:intron	35.0%
	TCTTCATCAAATGGAACCTA+CGG	+	chr3_1:91089884-91089903	Msa0387180:intron	35.0%
	CTAACTTTGAGCTGAATTAG+AGG	+	chr3_1:91089910-91089929	Msa0387180:intron	35.0%
	GTGCAATAGGCAAAATTTGT+TGG	+	chr3_1:91089932-91089951	Msa0387180:intron	35.0%
	AAGGTGTATGTGAATTTCGT+GGG	+	chr3_1:91089971-91089990	Msa0387180:intron	35.0%
!!!	AGCTGCTTTGCTTTTTAAGA+AGG	-	chr3_1:91090102-91090121	None:intergenic	35.0%
	AAAAAATGTTGTCCTAGCTG+CGG	+	chr3_1:91090165-91090184	Msa0387180:intron	35.0%
	TAAGCCACACATGATAAAAG+GGG	-	chr3_1:91090204-91090223	None:intergenic	35.0%
	AAGCTAATGTGAGTACCAAT+TGG	+	chr3_1:91090253-91090272	Msa0387180:exon	35.0%
	AAACAACTTATAACAGGGGA+AGG	-	chr3_1:91090455-91090474	None:intergenic	35.0%
!!	GATAAAATAAAGTGTTGGGG+GGG	-	chr3_1:91088968-91088987	None:intergenic	35.0%
	AAATTGGGATTGACTGAGTT+TGG	-	chr3_1:91089015-91089034	None:intergenic	35.0%
	TTCTTCTCATCATCTTGTCT+TGG	-	chr3_1:91089172-91089191	None:intergenic	35.0%
	AAATTTCTCCAATCATCCAC+CGG	+	chr3_1:91089274-91089293	Msa0387180:CDS	35.0%
!	GTGGGTTATTGGATTGATTA+TGG	+	chr3_1:91089427-91089446	Msa0387180:CDS	35.0%
	ATTATGGTTCTCTATGTTGC+TGG	+	chr3_1:91089443-91089462	Msa0387180:CDS	35.0%
	TGTTCTCTGTTATATCATGG+CGG	+	chr3_1:91089499-91089518	Msa0387180:CDS	35.0%
!	TTTCTTTTTCTGTGTTGGGT+TGG	+	chr3_1:91089752-91089771	Msa0387180:intron	35.0%
	CAATTTGCATCCCATTTCTT+TGG	-	chr3_1:91089809-91089828	None:intergenic	35.0%
	GCGAAAATCGAACATATTTG+GGG	-	chr3_1:91089849-91089868	None:intergenic	35.0%
	CAGCGAAAATCGAACATATT+TGG	-	chr3_1:91089851-91089870	None:intergenic	35.0%
!	TATGTTCGATTTTCGCTGAA+TGG	+	chr3_1:91089853-91089872	Msa0387180:intron	35.0%
!	ATGTTCGATTTTCGCTGAAT+GGG	+	chr3_1:91089854-91089873	Msa0387180:intron	35.0%
!!	GGTCTTGTTTCTTCATCAAA+TGG	+	chr3_1:91089875-91089894	Msa0387180:intron	35.0%
	TCTTCATCAAATGGAACCTA+CGG	+	chr3_1:91089884-91089903	Msa0387180:intron	35.0%
	CTAACTTTGAGCTGAATTAG+AGG	+	chr3_1:91089910-91089929	Msa0387180:intron	35.0%
	GTGCAATAGGCAAAATTTGT+TGG	+	chr3_1:91089932-91089951	Msa0387180:intron	35.0%
	AAGGTGTATGTGAATTTCGT+GGG	+	chr3_1:91089971-91089990	Msa0387180:intron	35.0%
!!!	AGCTGCTTTGCTTTTTAAGA+AGG	-	chr3_1:91090102-91090121	None:intergenic	35.0%
	AAAAAATGTTGTCCTAGCTG+CGG	+	chr3_1:91090165-91090184	Msa0387180:intron	35.0%
	TAAGCCACACATGATAAAAG+GGG	-	chr3_1:91090204-91090223	None:intergenic	35.0%
	AAGCTAATGTGAGTACCAAT+TGG	+	chr3_1:91090253-91090272	Msa0387180:exon	35.0%
	AAACAACTTATAACAGGGGA+AGG	-	chr3_1:91090455-91090474	None:intergenic	35.0%
!	GAGTTTGGTGGAAAGAAGAA+TGG	-	chr3_1:91089000-91089019	None:intergenic	40.0%
	TTGGAGAAATTTAACGGCGT+TGG	-	chr3_1:91089266-91089285	None:intergenic	40.0%
!	TCTGCTTCTGGGAATTTCTA+TGG	+	chr3_1:91089352-91089371	Msa0387180:CDS	40.0%
!!!	TTGGATTTGTTTTGATGCCG+TGG	+	chr3_1:91089408-91089427	Msa0387180:CDS	40.0%
!!!	TGGATTTGTTTTGATGCCGT+GGG	+	chr3_1:91089409-91089428	Msa0387180:CDS	40.0%
	GTTACCACTCTCTCTGATAT+AGG	+	chr3_1:91089470-91089489	Msa0387180:CDS	40.0%
	CCTGGAATAGAATCTTTACG+CGG	-	chr3_1:91089539-91089558	None:intergenic	40.0%
	AGCTCAAAGTTAGAAACCGT+AGG	-	chr3_1:91089903-91089922	None:intergenic	40.0%
!	AGCTGAATTAGAGGTGCAAT+AGG	+	chr3_1:91089919-91089938	Msa0387180:intron	40.0%
	CAAGGTGTATGTGAATTTCG+TGG	+	chr3_1:91089970-91089989	Msa0387180:intron	40.0%
	AGGTGTATGTGAATTTCGTG+GGG	+	chr3_1:91089972-91089991	Msa0387180:intron	40.0%
!	AAATTTGTGTTGTTGCAGCG+TGG	+	chr3_1:91090230-91090249	Msa0387180:intron	40.0%
!!	AGATACGGCGTTTGATTTTG+TGG	+	chr3_1:91090289-91090308	Msa0387180:three_prime_UTR	40.0%
	AACTTATAACAGGGGAAGGA+GGG	-	chr3_1:91090451-91090470	None:intergenic	40.0%
!	GAGTTTGGTGGAAAGAAGAA+TGG	-	chr3_1:91089000-91089019	None:intergenic	40.0%
	TTGGAGAAATTTAACGGCGT+TGG	-	chr3_1:91089266-91089285	None:intergenic	40.0%
!	TCTGCTTCTGGGAATTTCTA+TGG	+	chr3_1:91089352-91089371	Msa0387180:CDS	40.0%
!!!	TTGGATTTGTTTTGATGCCG+TGG	+	chr3_1:91089408-91089427	Msa0387180:CDS	40.0%
!!!	TGGATTTGTTTTGATGCCGT+GGG	+	chr3_1:91089409-91089428	Msa0387180:CDS	40.0%
	GTTACCACTCTCTCTGATAT+AGG	+	chr3_1:91089470-91089489	Msa0387180:CDS	40.0%
	CCTGGAATAGAATCTTTACG+CGG	-	chr3_1:91089539-91089558	None:intergenic	40.0%
	AGCTCAAAGTTAGAAACCGT+AGG	-	chr3_1:91089903-91089922	None:intergenic	40.0%
!	AGCTGAATTAGAGGTGCAAT+AGG	+	chr3_1:91089919-91089938	Msa0387180:intron	40.0%
	CAAGGTGTATGTGAATTTCG+TGG	+	chr3_1:91089970-91089989	Msa0387180:intron	40.0%
	AGGTGTATGTGAATTTCGTG+GGG	+	chr3_1:91089972-91089991	Msa0387180:intron	40.0%
!	AAATTTGTGTTGTTGCAGCG+TGG	+	chr3_1:91090230-91090249	Msa0387180:intron	40.0%
!!	AGATACGGCGTTTGATTTTG+TGG	+	chr3_1:91090289-91090308	Msa0387180:three_prime_UTR	40.0%
	AACTTATAACAGGGGAAGGA+GGG	-	chr3_1:91090451-91090470	None:intergenic	40.0%
	TTGGGATTGACTGAGTTTGG+TGG	-	chr3_1:91089012-91089031	None:intergenic	45.0%
	AGGGTTTATTGGGAGAAACG+AGG	-	chr3_1:91089055-91089074	None:intergenic	45.0%
	GGTTGAGAAGGATTGCAGAT+AGG	-	chr3_1:91089229-91089248	None:intergenic	45.0%
!	GAGAAATTTAACGGCGTTGG+TGG	-	chr3_1:91089263-91089282	None:intergenic	45.0%
	AGAAATTCCCAGAAGCAGAG+AGG	-	chr3_1:91089351-91089370	None:intergenic	45.0%
	GGATCGGTCACGTTCTTTAT+TGG	+	chr3_1:91089389-91089408	Msa0387180:CDS	45.0%
!!	GTTTTGATGCCGTGGGTTAT+TGG	+	chr3_1:91089416-91089435	Msa0387180:CDS	45.0%
	ACGACCTATATCAGAGAGAG+TGG	-	chr3_1:91089477-91089496	None:intergenic	45.0%
	GGAATAGAATCTTTACGCGG+CGG	-	chr3_1:91089536-91089555	None:intergenic	45.0%
	CCGCGTAAAGATTCTATTCC+AGG	+	chr3_1:91089536-91089555	Msa0387180:CDS	45.0%
!!	TTGGGTTGGTGAGAGAACAT+AGG	+	chr3_1:91089766-91089785	Msa0387180:intron	45.0%
!!	TGGGTTGGTGAGAGAACATA+GGG	+	chr3_1:91089767-91089786	Msa0387180:intron	45.0%
	TGGTGAGAGAACATAGGGAA+AGG	+	chr3_1:91089772-91089791	Msa0387180:intron	45.0%
	CCACACATGATAAAAGGGGT+GGG	-	chr3_1:91090200-91090219	None:intergenic	45.0%
	GAGAAGGAAGCTCCATAATG+TGG	-	chr3_1:91090346-91090365	None:intergenic	45.0%
	ACTTATAACAGGGGAAGGAG+GGG	-	chr3_1:91090450-91090469	None:intergenic	45.0%
	CAACTTATAACAGGGGAAGG+AGG	-	chr3_1:91090452-91090471	None:intergenic	45.0%
	TTGGGATTGACTGAGTTTGG+TGG	-	chr3_1:91089012-91089031	None:intergenic	45.0%
	AGGGTTTATTGGGAGAAACG+AGG	-	chr3_1:91089055-91089074	None:intergenic	45.0%
	GGTTGAGAAGGATTGCAGAT+AGG	-	chr3_1:91089229-91089248	None:intergenic	45.0%
!	GAGAAATTTAACGGCGTTGG+TGG	-	chr3_1:91089263-91089282	None:intergenic	45.0%
	AGAAATTCCCAGAAGCAGAG+AGG	-	chr3_1:91089351-91089370	None:intergenic	45.0%
	GGATCGGTCACGTTCTTTAT+TGG	+	chr3_1:91089389-91089408	Msa0387180:CDS	45.0%
!!	GTTTTGATGCCGTGGGTTAT+TGG	+	chr3_1:91089416-91089435	Msa0387180:CDS	45.0%
	ACGACCTATATCAGAGAGAG+TGG	-	chr3_1:91089477-91089496	None:intergenic	45.0%
	GGAATAGAATCTTTACGCGG+CGG	-	chr3_1:91089536-91089555	None:intergenic	45.0%
	CCGCGTAAAGATTCTATTCC+AGG	+	chr3_1:91089536-91089555	Msa0387180:CDS	45.0%
!!	TTGGGTTGGTGAGAGAACAT+AGG	+	chr3_1:91089766-91089785	Msa0387180:intron	45.0%
!!	TGGGTTGGTGAGAGAACATA+GGG	+	chr3_1:91089767-91089786	Msa0387180:intron	45.0%
	TGGTGAGAGAACATAGGGAA+AGG	+	chr3_1:91089772-91089791	Msa0387180:intron	45.0%
	CCACACATGATAAAAGGGGT+GGG	-	chr3_1:91090200-91090219	None:intergenic	45.0%
	GAGAAGGAAGCTCCATAATG+TGG	-	chr3_1:91090346-91090365	None:intergenic	45.0%
	ACTTATAACAGGGGAAGGAG+GGG	-	chr3_1:91090450-91090469	None:intergenic	45.0%
	CAACTTATAACAGGGGAAGG+AGG	-	chr3_1:91090452-91090471	None:intergenic	45.0%
	GAATGATAAGCAGAGCAGCG+AGG	-	chr3_1:91088932-91088951	None:intergenic	50.0%
	ATTGGGAGAAACGAGGCGAA+TGG	-	chr3_1:91089048-91089067	None:intergenic	50.0%
!!	TTAACGGCGTTGGTGGTGAA+CGG	-	chr3_1:91089256-91089275	None:intergenic	50.0%
	TCCACCTCAAATCTCACCTG+CGG	+	chr3_1:91089319-91089338	Msa0387180:CDS	50.0%
	AAACCCGCAGGTGAGATTTG+AGG	-	chr3_1:91089326-91089345	None:intergenic	50.0%
!	GGTTTTGCCTCTCTGCTTCT+GGG	+	chr3_1:91089341-91089360	Msa0387180:CDS	50.0%
!!	TCTATGGCTCTGATGCTCTG+TGG	+	chr3_1:91089368-91089387	Msa0387180:CDS	50.0%
	ATAGAATCTTTACGCGGCGG+TGG	-	chr3_1:91089533-91089552	None:intergenic	50.0%
	GATAAAAGGGGTGGGCAAGA+GGG	-	chr3_1:91090192-91090211	None:intergenic	50.0%
	TGATAAAAGGGGTGGGCAAG+AGG	-	chr3_1:91090193-91090212	None:intergenic	50.0%
!	CCCACCCCTTTTATCATGTG+TGG	+	chr3_1:91090197-91090216	Msa0387180:intron	50.0%
	GCCACACATGATAAAAGGGG+TGG	-	chr3_1:91090201-91090220	None:intergenic	50.0%
	CTTATAACAGGGGAAGGAGG+GGG	-	chr3_1:91090449-91090468	None:intergenic	50.0%
	GAATGATAAGCAGAGCAGCG+AGG	-	chr3_1:91088932-91088951	None:intergenic	50.0%
	ATTGGGAGAAACGAGGCGAA+TGG	-	chr3_1:91089048-91089067	None:intergenic	50.0%
!!	TTAACGGCGTTGGTGGTGAA+CGG	-	chr3_1:91089256-91089275	None:intergenic	50.0%
	TCCACCTCAAATCTCACCTG+CGG	+	chr3_1:91089319-91089338	Msa0387180:CDS	50.0%
	AAACCCGCAGGTGAGATTTG+AGG	-	chr3_1:91089326-91089345	None:intergenic	50.0%
!	GGTTTTGCCTCTCTGCTTCT+GGG	+	chr3_1:91089341-91089360	Msa0387180:CDS	50.0%
!!	TCTATGGCTCTGATGCTCTG+TGG	+	chr3_1:91089368-91089387	Msa0387180:CDS	50.0%
	ATAGAATCTTTACGCGGCGG+TGG	-	chr3_1:91089533-91089552	None:intergenic	50.0%
	GATAAAAGGGGTGGGCAAGA+GGG	-	chr3_1:91090192-91090211	None:intergenic	50.0%
	TGATAAAAGGGGTGGGCAAG+AGG	-	chr3_1:91090193-91090212	None:intergenic	50.0%
!	CCCACCCCTTTTATCATGTG+TGG	+	chr3_1:91090197-91090216	Msa0387180:intron	50.0%
	GCCACACATGATAAAAGGGG+TGG	-	chr3_1:91090201-91090220	None:intergenic	50.0%
	CTTATAACAGGGGAAGGAGG+GGG	-	chr3_1:91090449-91090468	None:intergenic	50.0%
	GTGAACGGAGGAGGTTGAGA+AGG	-	chr3_1:91089241-91089260	None:intergenic	55.0%
	ATCCACCGGAGCAACCGTTA+CGG	+	chr3_1:91089288-91089307	Msa0387180:CDS	55.0%
	AAACGCCGTAACGGTTGCTC+CGG	-	chr3_1:91089296-91089315	None:intergenic	55.0%
	GGTGGAGGTAAACGCCGTAA+CGG	-	chr3_1:91089305-91089324	None:intergenic	55.0%
!	GCAGGTGAGATTTGAGGTGG+AGG	-	chr3_1:91089320-91089339	None:intergenic	55.0%
	CCACCTCAAATCTCACCTGC+GGG	+	chr3_1:91089320-91089339	Msa0387180:CDS	55.0%
!	GGGTTTTGCCTCTCTGCTTC+TGG	+	chr3_1:91089340-91089359	Msa0387180:CDS	55.0%
!	GGCTCTGATGCTCTGTGGAT+CGG	+	chr3_1:91089373-91089392	Msa0387180:CDS	55.0%
	CTGTTATATCATGGCGGCGC+CGG	+	chr3_1:91089505-91089524	Msa0387180:CDS	55.0%
	GTGAACGGAGGAGGTTGAGA+AGG	-	chr3_1:91089241-91089260	None:intergenic	55.0%
	ATCCACCGGAGCAACCGTTA+CGG	+	chr3_1:91089288-91089307	Msa0387180:CDS	55.0%
	AAACGCCGTAACGGTTGCTC+CGG	-	chr3_1:91089296-91089315	None:intergenic	55.0%
	GGTGGAGGTAAACGCCGTAA+CGG	-	chr3_1:91089305-91089324	None:intergenic	55.0%
!	GCAGGTGAGATTTGAGGTGG+AGG	-	chr3_1:91089320-91089339	None:intergenic	55.0%
	CCACCTCAAATCTCACCTGC+GGG	+	chr3_1:91089320-91089339	Msa0387180:CDS	55.0%
!	GGGTTTTGCCTCTCTGCTTC+TGG	+	chr3_1:91089340-91089359	Msa0387180:CDS	55.0%
!	GGCTCTGATGCTCTGTGGAT+CGG	+	chr3_1:91089373-91089392	Msa0387180:CDS	55.0%
	CTGTTATATCATGGCGGCGC+CGG	+	chr3_1:91089505-91089524	Msa0387180:CDS	55.0%
	CGGTTGCTCCGGTGGATGAT+TGG	-	chr3_1:91089285-91089304	None:intergenic	60.0%
	CCCGCAGGTGAGATTTGAGG+TGG	-	chr3_1:91089323-91089342	None:intergenic	60.0%
	AGCAGAGAGGCAAAACCCGC+AGG	-	chr3_1:91089338-91089357	None:intergenic	60.0%
	CGGTTGCTCCGGTGGATGAT+TGG	-	chr3_1:91089285-91089304	None:intergenic	60.0%
	CCCGCAGGTGAGATTTGAGG+TGG	-	chr3_1:91089323-91089342	None:intergenic	60.0%
	AGCAGAGAGGCAAAACCCGC+AGG	-	chr3_1:91089338-91089357	None:intergenic	60.0%
!!	GCGTTGGTGGTGAACGGAGG+AGG	-	chr3_1:91089250-91089269	None:intergenic	65.0%
!!	ACGGCGTTGGTGGTGAACGG+AGG	-	chr3_1:91089253-91089272	None:intergenic	65.0%
	TCTTTACGCGGCGGTGGCTC+CGG	-	chr3_1:91089527-91089546	None:intergenic	65.0%
!!	GCGTTGGTGGTGAACGGAGG+AGG	-	chr3_1:91089250-91089269	None:intergenic	65.0%
!!	ACGGCGTTGGTGGTGAACGG+AGG	-	chr3_1:91089253-91089272	None:intergenic	65.0%
	TCTTTACGCGGCGGTGGCTC+CGG	-	chr3_1:91089527-91089546	None:intergenic	65.0%
	CGCCGTAACGGTTGCTCCGG+TGG	-	chr3_1:91089293-91089312	None:intergenic	70.0%
	GGGCAAGAGGGACCGCAGCT+AGG	-	chr3_1:91090180-91090199	None:intergenic	70.0%
	CGCCGTAACGGTTGCTCCGG+TGG	-	chr3_1:91089293-91089312	None:intergenic	70.0%
	GGGCAAGAGGGACCGCAGCT+AGG	-	chr3_1:91090180-91090199	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	91088929	91090607	91088929	ID=Msa0387180;Name=Msa0387180
chr3_1	mRNA	91088929	91090607	91088929	ID=Msa0387180-mRNA-1;Parent=Msa0387180;Name=Msa0387180-mRNA-1;_AED=0.00;_eAED=0.00;_QI=250\|1\|1\|1\|1\|1\|2\|343\|131
chr3_1	exon	91088929	91089557	91088929	ID=Msa0387180-mRNA-1:exon:25313;Parent=Msa0387180-mRNA-1
chr3_1	exon	91090248	91090607	91090248	ID=Msa0387180-mRNA-1:exon:25314;Parent=Msa0387180-mRNA-1
chr3_1	five_prime_UTR	91088929	91089178	91088929	ID=Msa0387180-mRNA-1:five_prime_utr;Parent=Msa0387180-mRNA-1
chr3_1	CDS	91089179	91089557	91089179	ID=Msa0387180-mRNA-1:cds;Parent=Msa0387180-mRNA-1
chr3_1	CDS	91090248	91090264	91090248	ID=Msa0387180-mRNA-1:cds;Parent=Msa0387180-mRNA-1
chr3_1	three_prime_UTR	91090265	91090607	91090265	ID=Msa0387180-mRNA-1:three_prime_utr;Parent=Msa0387180-mRNA-1

Gene Sequence

>Msa0387180

ATGATGAGAAGAACACGTGAAGATGAACAATCACGAGCTTTCTACGACCTATCTGCAATCCTTCTCAACCTCCTCCGTTCACCACCAACGCCGTTAAATTTCTCCAATCATCCACCGGAGCAACCGTTACGGCGTTTACCTCCACCTCAAATCTCACCTGCGGGTTTTGCCTCTCTGCTTCTGGGAATTTCTATGGCTCTGATGCTCTGTGGATCGGTCACGTTCTTTATTGGATTTGTTTTGATGCCGTGGGTTATTGGATTGATTATGGTTCTCTATGTTGCTGGAATTGTTACCACTCTCTCTGATATAGGTCGTTCTGTTCTCTGTTATATCATGGCGGCGCCGGAGCCACCGCCGCGTAAAGATTCTATTCCAGCGTGGAAGCTAATGTGA

Protein sequence

>Msa0387180

MMRRTREDEQSRAFYDLSAILLNLLRSPPTPLNFSNHPPEQPLRRLPPPQISPAGFASLLLGISMALMLCGSVTFFIGFVLMPWVIGLIMVLYVAGIVTTLSDIGRSVLCYIMAAPEPPPRKDSIPAWKLM*