Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293580 | XP_013445497.1 | 98.889 | 180 | 2 | 0 | 1 | 180 | 1 | 180 | 2.17e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293580 | sp|Q38740|SBP2_ANTMA | 69.474 | 95 | 29 | 0 | 55 | 149 | 75 | 169 | 3.08e-43 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293580 | A0A072TRQ4 | 98.889 | 180 | 2 | 0 | 1 | 180 | 1 | 180 | 1.04e-127 | 365 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1293580 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000180 | Msa1293580 | 0.806782 | 6.959115e-50 | -8.615850e-47 |
| Msa0008330 | Msa1293580 | 0.837319 | 5.576534e-57 | -8.615850e-47 |
| Msa0021980 | Msa1293580 | 0.824378 | 8.338665e-54 | -8.615850e-47 |
| Msa0036150 | Msa1293580 | 0.800316 | 1.526126e-48 | -8.615850e-47 |
| Msa0046670 | Msa1293580 | 0.801620 | 8.263773e-49 | -8.615850e-47 |
| Msa0053480 | Msa1293580 | 0.818828 | 1.598651e-52 | -8.615850e-47 |
| Msa0053960 | Msa1293580 | 0.821672 | 3.565818e-53 | -8.615850e-47 |
| Msa0057260 | Msa1293580 | 0.808554 | 2.925043e-50 | -8.615850e-47 |
| Msa0057740 | Msa1293580 | 0.801221 | 9.971542e-49 | -8.615850e-47 |
| Msa0063850 | Msa1293580 | 0.811032 | 8.573560e-51 | -8.615850e-47 |
| Msa0089410 | Msa1293580 | 0.822979 | 1.772242e-53 | -8.615850e-47 |
| Msa0092750 | Msa1293580 | 0.807828 | 4.176753e-50 | -8.615850e-47 |
| Msa0094240 | Msa1293580 | 0.808402 | 3.152702e-50 | -8.615850e-47 |
| Msa0103060 | Msa1293580 | 0.809466 | 1.866358e-50 | -8.615850e-47 |
| Msa0109260 | Msa1293580 | 0.807889 | 4.053588e-50 | -8.615850e-47 |
| Msa0114960 | Msa1293580 | 0.808949 | 2.408064e-50 | -8.615850e-47 |
| Msa0117300 | Msa1293580 | 0.819492 | 1.129055e-52 | -8.615850e-47 |
| Msa0118250 | Msa1293580 | 0.803872 | 2.833135e-49 | -8.615850e-47 |
| Msa0607620 | Msa1293580 | 0.824126 | 9.556413e-54 | -8.615850e-47 |
| Msa0608940 | Msa1293580 | 0.841482 | 4.627840e-58 | -8.615850e-47 |
| Msa0618260 | Msa1293580 | 0.812332 | 4.471261e-51 | -8.615850e-47 |
| Msa0626890 | Msa1293580 | 0.823578 | 1.284468e-53 | -8.615850e-47 |
| Msa0631340 | Msa1293580 | 0.804715 | 1.890914e-49 | -8.615850e-47 |
| Msa0639640 | Msa1293580 | 0.817930 | 2.553667e-52 | -8.615850e-47 |
| Msa0646390 | Msa1293580 | 0.820414 | 6.947956e-53 | -8.615850e-47 |
| Msa0649530 | Msa1293580 | 0.822248 | 2.622625e-53 | -8.615850e-47 |
| Msa0657860 | Msa1293580 | 0.815274 | 1.005436e-51 | -8.615850e-47 |
| Msa0664130 | Msa1293580 | 0.805681 | 1.187093e-49 | -8.615850e-47 |
| Msa0669710 | Msa1293580 | 0.801579 | 8.424357e-49 | -8.615850e-47 |
| Msa0669750 | Msa1293580 | 0.802634 | 5.112751e-49 | -8.615850e-47 |
| Msa0675250 | Msa1293580 | 0.807695 | 4.457177e-50 | -8.615850e-47 |
| Msa0691740 | Msa1293580 | 0.807536 | 4.817295e-50 | -8.615850e-47 |
| Msa0702200 | Msa1293580 | 0.807327 | 5.336627e-50 | -8.615850e-47 |
| Msa0714200 | Msa1293580 | 0.802462 | 5.547819e-49 | -8.615850e-47 |
| Msa0714930 | Msa1293580 | 0.803284 | 3.751633e-49 | -8.615850e-47 |
| Msa0727300 | Msa1293580 | 0.802059 | 6.715290e-49 | -8.615850e-47 |
| Msa0738600 | Msa1293580 | 0.829252 | 5.712965e-55 | -8.615850e-47 |
| Msa0747900 | Msa1293580 | 0.830351 | 3.084378e-55 | -8.615850e-47 |
| Msa0748980 | Msa1293580 | 0.845337 | 4.324405e-59 | -8.615850e-47 |
| Msa0752830 | Msa1293580 | 0.843228 | 1.593950e-58 | -8.615850e-47 |
| Msa0756440 | Msa1293580 | 0.808044 | 3.758121e-50 | -8.615850e-47 |
| Msa0756940 | Msa1293580 | 0.848590 | 5.562127e-60 | -8.615850e-47 |
| Msa0768490 | Msa1293580 | 0.805916 | 1.059716e-49 | -8.615850e-47 |
| Msa0774560 | Msa1293580 | 0.800600 | 1.335852e-48 | -8.615850e-47 |
| Msa0795400 | Msa1293580 | 0.841233 | 5.379542e-58 | -8.615850e-47 |
| Msa0818950 | Msa1293580 | 0.835025 | 2.133612e-56 | -8.615850e-47 |
| Msa0825520 | Msa1293580 | 0.837707 | 4.434285e-57 | -8.615850e-47 |
| Msa0835550 | Msa1293580 | 0.813103 | 3.031912e-51 | -8.615850e-47 |
| Msa0836510 | Msa1293580 | 0.846955 | 1.568416e-59 | -8.615850e-47 |
| Msa0136520 | Msa1293580 | 0.803964 | 2.711677e-49 | -8.615850e-47 |
| Msa0143360 | Msa1293580 | 0.839783 | 1.288584e-57 | -8.615850e-47 |
| Msa0155500 | Msa1293580 | 0.800864 | 1.179979e-48 | -8.615850e-47 |
| Msa0164630 | Msa1293580 | 0.810837 | 9.451217e-51 | -8.615850e-47 |
| Msa0184030 | Msa1293580 | 0.822373 | 2.452389e-53 | -8.615850e-47 |
| Msa0184850 | Msa1293580 | 0.801294 | 9.634562e-49 | -8.615850e-47 |
| Msa0196630 | Msa1293580 | 0.801938 | 7.109343e-49 | -8.615850e-47 |
| Msa0197600 | Msa1293580 | 0.832853 | 7.456999e-56 | -8.615850e-47 |
| Msa0201910 | Msa1293580 | 0.810679 | 1.022436e-50 | -8.615850e-47 |
| Msa0221940 | Msa1293580 | 0.831817 | 1.346292e-55 | -8.615850e-47 |
| Msa1230190 | Msa1293580 | 0.838537 | 2.712153e-57 | -8.615850e-47 |
| Msa1244650 | Msa1293580 | 0.926142 | 7.032097e-91 | -8.615850e-47 |
| Msa1272770 | Msa1293580 | 0.821511 | 3.884440e-53 | -8.615850e-47 |
| Msa1291140 | Msa1293580 | 0.807706 | 4.434201e-50 | -8.615850e-47 |
| Msa1293580 | Msa1296610 | 0.836137 | 1.116127e-56 | -8.615850e-47 |
| Msa1293580 | Msa1303720 | 0.800287 | 1.547123e-48 | -8.615850e-47 |
| Msa1293580 | Msa1325810 | 0.858078 | 1.054503e-62 | -8.615850e-47 |
| Msa1293580 | Msa1326900 | 0.825218 | 5.284303e-54 | -8.615850e-47 |
| Msa1293580 | Msa1327820 | 0.811241 | 7.726142e-51 | -8.615850e-47 |
| Msa1293580 | Msa1329020 | 0.808946 | 2.412697e-50 | -8.615850e-47 |
| Msa1293580 | Msa1329820 | 0.844547 | 7.067716e-59 | -8.615850e-47 |
| Msa1293580 | Msa1330910 | 0.808843 | 2.537939e-50 | -8.615850e-47 |
| Msa1293580 | Msa1341790 | 0.807620 | 4.624161e-50 | -8.615850e-47 |
| Msa1293580 | Msa1346920 | 0.811490 | 6.821994e-51 | -8.615850e-47 |
| Msa1293580 | Msa1349640 | 0.815320 | 9.818316e-52 | -8.615850e-47 |
| Msa1293580 | Msa1356730 | 0.819510 | 1.118597e-52 | -8.615850e-47 |
| Msa1293580 | Msa1368660 | 0.825437 | 4.689007e-54 | -8.615850e-47 |
| Msa1293580 | Msa1381720 | 0.812575 | 3.956167e-51 | -8.615850e-47 |
| Msa1293580 | Msa1384620 | 0.840822 | 6.897800e-58 | -8.615850e-47 |
| Msa1293580 | Msa1384980 | 0.823246 | 1.536018e-53 | -8.615850e-47 |
| Msa1293580 | Msa1385940 | 0.814772 | 1.299349e-51 | -8.615850e-47 |
| Msa1293580 | Msa1388270 | 0.804139 | 2.493652e-49 | -8.615850e-47 |
| Msa1293580 | Msa1391600 | 0.846023 | 2.817152e-59 | -8.615850e-47 |
| Msa1293580 | Msa1395580 | 0.843825 | 1.103834e-58 | -8.615850e-47 |
| Msa1293580 | Msa1397540 | 0.834336 | 3.180003e-56 | -8.615850e-47 |
| Msa1293580 | Msa1397550 | 0.801768 | 7.704318e-49 | -8.615850e-47 |
| Msa1293580 | Msa1413880 | 0.843694 | 1.197049e-58 | -8.615850e-47 |
| Msa1293580 | Msa1432250 | 0.838817 | 2.295575e-57 | -8.615850e-47 |
| Msa1293580 | Msa1433380 | 0.825529 | 4.461216e-54 | -8.615850e-47 |
| Msa1293580 | Msa1440160 | 0.839497 | 1.529904e-57 | -8.615850e-47 |
| Msa1293580 | Msa1446220 | 0.800052 | 1.726834e-48 | -8.615850e-47 |
| Msa1293580 | Msa1450850 | 0.828944 | 6.781969e-55 | -8.615850e-47 |
| Msa1293580 | Msa1451780 | 0.828154 | 1.052651e-54 | -8.615850e-47 |
| Msa1293580 | Msa1459630 | 0.833452 | 5.290916e-56 | -8.615850e-47 |
| Msa1293580 | Msa1462600 | 0.811325 | 7.408621e-51 | -8.615850e-47 |
| Msa0372990 | Msa1293580 | 0.831375 | 1.730156e-55 | -8.615850e-47 |
| Msa0373110 | Msa1293580 | 0.856918 | 2.323995e-62 | -8.615850e-47 |
| Msa0373220 | Msa1293580 | 0.804149 | 2.481624e-49 | -8.615850e-47 |
| Msa0415200 | Msa1293580 | 0.808680 | 2.749078e-50 | -8.615850e-47 |
| Msa0421480 | Msa1293580 | 0.818298 | 2.108543e-52 | -8.615850e-47 |
| Msa0427050 | Msa1293580 | 0.825201 | 5.332046e-54 | -8.615850e-47 |
| Msa0431250 | Msa1293580 | 0.812322 | 4.494707e-51 | -8.615850e-47 |
| Msa0431940 | Msa1293580 | 0.830953 | 2.196038e-55 | -8.615850e-47 |
| Msa0453310 | Msa1293580 | 0.841435 | 4.760872e-58 | -8.615850e-47 |
| Msa0458790 | Msa1293580 | 0.803534 | 3.330036e-49 | -8.615850e-47 |
| Msa0467480 | Msa1293580 | 0.868101 | 8.384807e-66 | -8.615850e-47 |
| Msa0468020 | Msa1293580 | 0.805290 | 1.433535e-49 | -8.615850e-47 |
| Msa0468050 | Msa1293580 | -0.808008 | 3.824103e-50 | -8.615850e-47 |
| Msa0473450 | Msa1293580 | 0.808389 | 3.172933e-50 | -8.615850e-47 |
| Msa0983030 | Msa1293580 | 0.811532 | 6.678158e-51 | -8.615850e-47 |
| Msa0995660 | Msa1293580 | 0.808415 | 3.132044e-50 | -8.615850e-47 |
| Msa0995670 | Msa1293580 | 0.818596 | 1.804727e-52 | -8.615850e-47 |
| Msa0998940 | Msa1293580 | 0.813594 | 2.365674e-51 | -8.615850e-47 |
| Msa1008960 | Msa1293580 | 0.827191 | 1.793113e-54 | -8.615850e-47 |
| Msa1018720 | Msa1293580 | 0.820591 | 6.326810e-53 | -8.615850e-47 |
| Msa1024120 | Msa1293580 | 0.811118 | 8.213204e-51 | -8.615850e-47 |
| Msa1031220 | Msa1293580 | 0.802102 | 6.579816e-49 | -8.615850e-47 |
| Msa1036350 | Msa1293580 | 0.816284 | 5.986341e-52 | -8.615850e-47 |
| Msa1036360 | Msa1293580 | 0.804632 | 1.968257e-49 | -8.615850e-47 |
| Msa1042380 | Msa1293580 | 0.837663 | 4.552144e-57 | -8.615850e-47 |
| Msa1044450 | Msa1293580 | 0.812172 | 4.845779e-51 | -8.615850e-47 |
| Msa1050320 | Msa1293580 | 0.822331 | 2.508696e-53 | -8.615850e-47 |
| Msa1064920 | Msa1293580 | 0.817567 | 3.084179e-52 | -8.615850e-47 |
| Msa1067910 | Msa1293580 | 0.841545 | 4.453177e-58 | -8.615850e-47 |
| Msa1069440 | Msa1293580 | 0.800609 | 1.330133e-48 | -8.615850e-47 |
| Msa1071460 | Msa1293580 | 0.807803 | 4.228937e-50 | -8.615850e-47 |
| Msa1072640 | Msa1293580 | 0.807374 | 5.216036e-50 | -8.615850e-47 |
| Msa1076630 | Msa1293580 | 0.813349 | 2.677277e-51 | -8.615850e-47 |
| Msa1076640 | Msa1293580 | 0.807318 | 5.359520e-50 | -8.615850e-47 |
| Msa1085370 | Msa1293580 | 0.834354 | 3.146973e-56 | -8.615850e-47 |
| Msa1103610 | Msa1293580 | 0.810860 | 9.342049e-51 | -8.615850e-47 |
| Msa0240290 | Msa1293580 | 0.818153 | 2.274128e-52 | -8.615850e-47 |
| Msa0251140 | Msa1293580 | 0.814580 | 1.432821e-51 | -8.615850e-47 |
| Msa0263470 | Msa1293580 | 0.822234 | 2.642246e-53 | -8.615850e-47 |
| Msa0278080 | Msa1293580 | 0.800837 | 1.194809e-48 | -8.615850e-47 |
| Msa0301300 | Msa1293580 | 0.800904 | 1.157671e-48 | -8.615850e-47 |
| Msa0311330 | Msa1293580 | 0.802044 | 6.760323e-49 | -8.615850e-47 |
| Msa0317630 | Msa1293580 | 0.814300 | 1.652511e-51 | -8.615850e-47 |
| Msa0324430 | Msa1293580 | 0.801761 | 7.730004e-49 | -8.615850e-47 |
| Msa0327870 | Msa1293580 | 0.815839 | 7.526690e-52 | -8.615850e-47 |
| Msa0338610 | Msa1293580 | 0.825564 | 4.375615e-54 | -8.615850e-47 |
| Msa0343200 | Msa1293580 | 0.848609 | 5.496322e-60 | -8.615850e-47 |
| Msa0343460 | Msa1293580 | 0.800541 | 1.373436e-48 | -8.615850e-47 |
| Msa0359230 | Msa1293580 | 0.804427 | 2.171167e-49 | -8.615850e-47 |
| Msa1107950 | Msa1293580 | 0.816239 | 6.127772e-52 | -8.615850e-47 |
| Msa1113210 | Msa1293580 | 0.873352 | 1.571936e-67 | -8.615850e-47 |
| Msa1113280 | Msa1293580 | 0.816449 | 5.499102e-52 | -8.615850e-47 |
| Msa1117830 | Msa1293580 | 0.821062 | 4.928550e-53 | -8.615850e-47 |
| Msa1125100 | Msa1293580 | 0.842684 | 2.224999e-58 | -8.615850e-47 |
| Msa1125150 | Msa1293580 | 0.842059 | 3.258296e-58 | -8.615850e-47 |
| Msa1145070 | Msa1293580 | 0.807472 | 4.971974e-50 | -8.615850e-47 |
| Msa1147190 | Msa1293580 | 0.807754 | 4.330102e-50 | -8.615850e-47 |
| Msa1152500 | Msa1293580 | 0.806441 | 8.214412e-50 | -8.615850e-47 |
| Msa1175590 | Msa1293580 | 0.800252 | 1.572404e-48 | -8.615850e-47 |
| Msa1182400 | Msa1293580 | 0.825396 | 4.797216e-54 | -8.615850e-47 |
| Msa1186010 | Msa1293580 | 0.816330 | 5.847505e-52 | -8.615850e-47 |
| Msa1190980 | Msa1293580 | 0.922894 | 5.427934e-89 | -8.615850e-47 |
| Msa1194170 | Msa1293580 | -0.814293 | 1.658843e-51 | -8.615850e-47 |
| Msa1195860 | Msa1293580 | 0.803308 | 3.708452e-49 | -8.615850e-47 |
| Msa1203840 | Msa1293580 | 0.827548 | 1.472312e-54 | -8.615850e-47 |
| Msa1203860 | Msa1293580 | 0.825129 | 5.546016e-54 | -8.615850e-47 |
| Msa1204390 | Msa1293580 | 0.822864 | 1.885517e-53 | -8.615850e-47 |
| Msa1211280 | Msa1293580 | 0.828449 | 8.936310e-55 | -8.615850e-47 |
| Msa1211370 | Msa1293580 | 0.853759 | 1.932824e-61 | -8.615850e-47 |
| Msa0515420 | Msa1293580 | 0.813302 | 2.741971e-51 | -8.615850e-47 |
| Msa0520810 | Msa1293580 | 0.817494 | 3.203256e-52 | -8.615850e-47 |
| Msa0535020 | Msa1293580 | 0.802014 | 6.857072e-49 | -8.615850e-47 |
| Msa0535050 | Msa1293580 | 0.803601 | 3.224834e-49 | -8.615850e-47 |
| Msa0549740 | Msa1293580 | 0.818471 | 1.927117e-52 | -8.615850e-47 |
| Msa0553520 | Msa1293580 | 0.802889 | 4.527153e-49 | -8.615850e-47 |
| Msa0555510 | Msa1293580 | 0.815756 | 7.852099e-52 | -8.615850e-47 |
| Msa0566010 | Msa1293580 | 0.820639 | 6.166557e-53 | -8.615850e-47 |
| Msa0584590 | Msa1293580 | 0.854199 | 1.443054e-61 | -8.615850e-47 |
| Msa0587060 | Msa1293580 | 0.822524 | 2.262162e-53 | -8.615850e-47 |
| Msa0591780 | Msa1293580 | 0.809751 | 1.620841e-50 | -8.615850e-47 |
| Msa0595240 | Msa1293580 | 0.815685 | 8.146685e-52 | -8.615850e-47 |
| Msa0861480 | Msa1293580 | 0.805446 | 1.329575e-49 | -8.615850e-47 |
| Msa0864730 | Msa1293580 | 0.835652 | 1.481008e-56 | -8.615850e-47 |
| Msa0864750 | Msa1293580 | 0.835957 | 1.240009e-56 | -8.615850e-47 |
| Msa0880060 | Msa1293580 | 0.817444 | 3.286502e-52 | -8.615850e-47 |
| Msa0887000 | Msa1293580 | 0.821138 | 4.734824e-53 | -8.615850e-47 |
| Msa0895850 | Msa1293580 | 0.819334 | 1.226735e-52 | -8.615850e-47 |
| Msa0922340 | Msa1293580 | 0.818104 | 2.332803e-52 | -8.615850e-47 |
| Msa0927890 | Msa1293580 | 0.840399 | 8.899559e-58 | -8.615850e-47 |
| Msa0938370 | Msa1293580 | 0.808706 | 2.714109e-50 | -8.615850e-47 |
| Msa0961230 | Msa1293580 | 0.830486 | 2.858586e-55 | -8.615850e-47 |
| Msa0967250 | Msa1293580 | 0.802247 | 6.142648e-49 | -8.615850e-47 |
| Msa0967260 | Msa1293580 | 0.843820 | 1.107532e-58 | -8.615850e-47 |
| Msa0967450 | Msa1293580 | 0.810653 | 1.035671e-50 | -8.615850e-47 |
| Msa0968960 | Msa1293580 | 0.804459 | 2.138853e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293580 | MtrunA17_Chr8g0360361 | 98.889 | 180 | 2 | 0 | 1 | 180 | 1 | 180 | 2.00e-131 | 365 |
| Msa1293580 | MtrunA17_Chr4g0046991 | 68.132 | 91 | 29 | 0 | 56 | 146 | 64 | 154 | 6.64e-43 | 140 |
| Msa1293580 | MtrunA17_Chr7g0270541 | 52.632 | 152 | 53 | 2 | 15 | 154 | 90 | 234 | 2.61e-39 | 142 |
| Msa1293580 | MtrunA17_Chr3g0122411 | 69.512 | 82 | 25 | 0 | 63 | 144 | 163 | 244 | 1.33e-37 | 134 |
| Msa1293580 | MtrunA17_Chr7g0258471 | 67.778 | 90 | 26 | 1 | 57 | 143 | 131 | 220 | 1.69e-37 | 133 |
| Msa1293580 | MtrunA17_Chr1g0194121 | 53.472 | 144 | 60 | 2 | 15 | 154 | 96 | 236 | 4.35e-37 | 135 |
| Msa1293580 | MtrunA17_Chr2g0282521 | 65.116 | 86 | 30 | 0 | 57 | 142 | 56 | 141 | 5.92e-37 | 125 |
| Msa1293580 | MtrunA17_Chr8g0334671 | 71.765 | 85 | 24 | 0 | 55 | 139 | 177 | 261 | 8.49e-37 | 129 |
| Msa1293580 | MtrunA17_Chr7g0231911 | 64.516 | 93 | 33 | 0 | 57 | 149 | 141 | 233 | 4.94e-36 | 127 |
| Msa1293580 | MtrunA17_Chr1g0162871 | 60.784 | 102 | 40 | 0 | 53 | 154 | 92 | 193 | 1.48e-34 | 128 |
| Msa1293580 | MtrunA17_Chr2g0302791 | 71.250 | 80 | 23 | 0 | 65 | 144 | 139 | 218 | 1.11e-33 | 125 |
| Msa1293580 | MtrunA17_Chr7g0224821 | 63.291 | 79 | 29 | 0 | 65 | 143 | 77 | 155 | 2.19e-32 | 119 |
| Msa1293580 | MtrunA17_Chr4g0061651 | 65.476 | 84 | 28 | 1 | 65 | 147 | 123 | 206 | 4.05e-32 | 119 |
| Msa1293580 | MtrunA17_Chr3g0132091 | 64.103 | 78 | 28 | 0 | 65 | 142 | 73 | 150 | 4.15e-32 | 118 |
| Msa1293580 | MtrunA17_Chr8g0386271 | 57.292 | 96 | 41 | 0 | 54 | 149 | 88 | 183 | 2.55e-31 | 116 |
| Msa1293580 | MtrunA17_Chr5g0420051 | 67.105 | 76 | 25 | 0 | 63 | 138 | 179 | 254 | 2.73e-31 | 117 |
| Msa1293580 | MtrunA17_Chr8g0377401 | 64.474 | 76 | 27 | 0 | 62 | 137 | 159 | 234 | 7.59e-31 | 112 |
| Msa1293580 | MtrunA17_Chr8g0377421 | 56.818 | 88 | 38 | 0 | 62 | 149 | 129 | 216 | 2.01e-30 | 112 |
| Msa1293580 | MtrunA17_Chr2g0308321 | 68.919 | 74 | 23 | 0 | 65 | 138 | 171 | 244 | 2.82e-30 | 115 |
| Msa1293580 | MtrunA17_Chr2g0317041 | 72.857 | 70 | 16 | 2 | 45 | 111 | 76 | 145 | 1.15e-26 | 99.0 |
| Msa1293580 | MtrunA17_Chr2g0286661 | 42.857 | 98 | 56 | 0 | 65 | 162 | 103 | 200 | 3.78e-20 | 87.0 |
| Msa1293580 | MtrunA17_Chr1g0175031 | 66.000 | 50 | 17 | 0 | 62 | 111 | 71 | 120 | 3.34e-17 | 73.9 |
| Msa1293580 | MtrunA17_Chr2g0317031 | 55.072 | 69 | 29 | 1 | 112 | 180 | 9 | 75 | 3.41e-16 | 69.7 |
| Msa1293580 | MtrunA17_Chr8g0377431 | 56.897 | 58 | 25 | 0 | 63 | 120 | 149 | 206 | 3.44e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1293580 | AT3G15270.1 | 48.913 | 184 | 87 | 5 | 1 | 180 | 1 | 181 | 9.55e-43 | 141 |
| Msa1293580 | AT3G60030.1 | 50.000 | 154 | 72 | 1 | 6 | 154 | 63 | 216 | 2.36e-40 | 145 |
| Msa1293580 | AT1G53160.2 | 54.331 | 127 | 53 | 2 | 59 | 180 | 48 | 174 | 3.84e-39 | 132 |
| Msa1293580 | AT1G53160.1 | 54.331 | 127 | 53 | 2 | 59 | 180 | 48 | 174 | 3.84e-39 | 132 |
| Msa1293580 | AT2G33810.1 | 65.517 | 87 | 30 | 0 | 56 | 142 | 45 | 131 | 1.45e-38 | 129 |
| Msa1293580 | AT1G53160.3 | 68.132 | 91 | 28 | 1 | 59 | 148 | 48 | 138 | 1.85e-38 | 130 |
| Msa1293580 | AT1G02065.1 | 60.185 | 108 | 42 | 1 | 52 | 159 | 175 | 281 | 1.09e-36 | 130 |
| Msa1293580 | AT2G47070.1 | 56.034 | 116 | 47 | 1 | 33 | 148 | 78 | 189 | 1.11e-36 | 134 |
| Msa1293580 | AT2G42200.1 | 70.370 | 81 | 24 | 0 | 63 | 143 | 72 | 152 | 2.60e-34 | 124 |
| Msa1293580 | AT1G20980.1 | 56.034 | 116 | 49 | 2 | 54 | 168 | 109 | 223 | 3.27e-33 | 125 |
| Msa1293580 | AT1G69170.1 | 69.737 | 76 | 23 | 0 | 63 | 138 | 122 | 197 | 6.03e-33 | 121 |
| Msa1293580 | AT5G43270.3 | 64.706 | 85 | 30 | 0 | 63 | 147 | 167 | 251 | 1.98e-32 | 120 |
| Msa1293580 | AT5G43270.1 | 64.706 | 85 | 30 | 0 | 63 | 147 | 167 | 251 | 1.98e-32 | 120 |
| Msa1293580 | AT5G43270.2 | 64.706 | 85 | 30 | 0 | 63 | 147 | 167 | 251 | 1.98e-32 | 120 |
| Msa1293580 | AT1G76580.2 | 69.136 | 81 | 25 | 0 | 63 | 143 | 112 | 192 | 4.55e-32 | 121 |
| Msa1293580 | AT1G76580.3 | 69.136 | 81 | 25 | 0 | 63 | 143 | 112 | 192 | 5.01e-32 | 121 |
| Msa1293580 | AT5G50570.1 | 62.500 | 80 | 30 | 0 | 63 | 142 | 99 | 178 | 5.65e-32 | 118 |
| Msa1293580 | AT5G50570.2 | 62.500 | 80 | 30 | 0 | 63 | 142 | 99 | 178 | 5.65e-32 | 118 |
| Msa1293580 | AT5G50670.1 | 62.500 | 80 | 30 | 0 | 63 | 142 | 99 | 178 | 5.65e-32 | 118 |
| Msa1293580 | AT5G50670.2 | 62.500 | 80 | 30 | 0 | 63 | 142 | 99 | 178 | 5.65e-32 | 118 |
| Msa1293580 | AT1G76580.1 | 69.136 | 81 | 25 | 0 | 63 | 143 | 112 | 192 | 7.40e-32 | 120 |
| Msa1293580 | AT3G57920.1 | 61.364 | 88 | 34 | 0 | 65 | 152 | 59 | 146 | 6.69e-31 | 115 |
| Msa1293580 | AT1G27370.6 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 9.89e-30 | 112 |
| Msa1293580 | AT1G27360.2 | 56.000 | 100 | 38 | 1 | 49 | 142 | 159 | 258 | 1.81e-29 | 112 |
| Msa1293580 | AT1G27360.1 | 56.000 | 100 | 38 | 1 | 49 | 142 | 159 | 258 | 1.81e-29 | 112 |
| Msa1293580 | AT1G27360.3 | 56.000 | 100 | 38 | 1 | 49 | 142 | 159 | 258 | 1.81e-29 | 112 |
| Msa1293580 | AT1G27360.4 | 56.000 | 100 | 38 | 1 | 49 | 142 | 159 | 258 | 1.81e-29 | 112 |
| Msa1293580 | AT1G27370.1 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G27370.5 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G27370.3 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G27370.2 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G27370.4 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G27370.7 | 60.976 | 82 | 32 | 0 | 57 | 138 | 168 | 249 | 3.28e-29 | 111 |
| Msa1293580 | AT1G02065.2 | 68.852 | 61 | 19 | 0 | 52 | 112 | 175 | 235 | 1.77e-23 | 93.6 |
| Msa1293580 | AT2G47070.2 | 72.881 | 59 | 16 | 0 | 90 | 148 | 2 | 60 | 3.23e-23 | 96.3 |
| Msa1293580 | AT5G18830.3 | 42.017 | 119 | 62 | 2 | 20 | 138 | 100 | 211 | 8.90e-21 | 89.4 |
| Msa1293580 | AT5G18830.1 | 42.017 | 119 | 62 | 2 | 20 | 138 | 100 | 211 | 9.05e-21 | 89.4 |
| Msa1293580 | AT5G18830.2 | 42.017 | 119 | 62 | 2 | 20 | 138 | 100 | 211 | 1.14e-20 | 89.0 |
Find 86 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAACTCACACACTTTA+TGG | 0.102129 | 8_3:-50965725 | None:intergenic |
| CTCTCTCTTCTGTCACCTTC+TGG | 0.186522 | 8_3:+50966613 | Msa1293580:three_prime_UTR |
| CTTCCCTCATTGGCAGCTTC+CGG | 0.190285 | 8_3:-50966449 | None:intergenic |
| CCATTTAGATGTAGGATATT+TGG | 0.207975 | 8_3:-50966705 | None:intergenic |
| AGGATATTTGGTGGGTAATT+AGG | 0.244632 | 8_3:-50966693 | None:intergenic |
| CATTCAAAGGTGCTTTAATA+AGG | 0.264972 | 8_3:-50966774 | None:intergenic |
| TTCCCTCATTGGCAGCTTCC+GGG | 0.279455 | 8_3:-50966448 | None:intergenic |
| AATAGAAGAAGCTTGAGTTT+TGG | 0.300418 | 8_3:-50965393 | None:intergenic |
| GTGAACTGACAATGGCTATA+AGG | 0.313347 | 8_3:-50965441 | None:intergenic |
| GCACCTGTTGTGGTGGTTGC+AGG | 0.325472 | 8_3:+50965753 | Msa1293580:CDS |
| GCTGTGACTGCTTCCCTCAT+TGG | 0.328447 | 8_3:-50966459 | None:intergenic |
| ATGAACTTACCAGGCAGTTC+TGG | 0.332336 | 8_3:+50966524 | Msa1293580:CDS |
| CCAAATATCCTACATCTAAA+TGG | 0.346083 | 8_3:+50966705 | Msa1293580:three_prime_UTR |
| GGGGTCGGTGGCGGGAGAAG+AGG | 0.366575 | 8_3:+50965618 | Msa1293580:CDS |
| CTGAAGAAGAGAAGAAGAAA+GGG | 0.366865 | 8_3:+50965598 | Msa1293580:CDS |
| AGCTGCCGCAGGCGGTTGGC+TGG | 0.389734 | 8_3:+50966398 | Msa1293580:CDS |
| TTAGCTTCATCTAATGTTGA+AGG | 0.400420 | 8_3:-50966555 | None:intergenic |
| CAACATGGTGGAAGAAGAAA+TGG | 0.403464 | 8_3:+50965536 | Msa1293580:CDS |
| ATCCCTGCAACCACCACAAC+AGG | 0.415205 | 8_3:-50965756 | None:intergenic |
| AGAAGAAAGGGGTCGGTGGC+GGG | 0.418165 | 8_3:+50965610 | Msa1293580:CDS |
| TGTCACCTTCTGGTTTCTTA+CGG | 0.423252 | 8_3:+50966623 | Msa1293580:three_prime_UTR |
| GTCGGTGGCGGGAGAAGAGG+AGG | 0.431374 | 8_3:+50965621 | Msa1293580:CDS |
| AAGAAGAAAGGGGTCGGTGG+CGG | 0.439947 | 8_3:+50965609 | Msa1293580:CDS |
| TGAACTGACAATGGCTATAA+GGG | 0.440303 | 8_3:-50965440 | None:intergenic |
| ATCCTGCATTGAGTTTCCTT+AGG | 0.443576 | 8_3:-50966497 | None:intergenic |
| GGCGGGAGAAGAGGAGGTGG+TGG | 0.448247 | 8_3:+50965627 | Msa1293580:CDS |
| AGGATCTTTATTCTATGCCT+TGG | 0.454275 | 8_3:-50966647 | None:intergenic |
| AAATGAAGTAGAAGAGGAGG+AGG | 0.457054 | 8_3:+50965560 | Msa1293580:CDS |
| GGGAGAAGAGGAGGTGGTGG+CGG | 0.468248 | 8_3:+50965630 | Msa1293580:CDS |
| CTCATTGGCAGCTTCCGGGT+TGG | 0.474954 | 8_3:-50966444 | None:intergenic |
| TGGTTGCAGGGATGAGGCAG+AGG | 0.476673 | 8_3:+50965766 | Msa1293580:CDS |
| ACTGAAGAAGAGAAGAAGAA+AGG | 0.477392 | 8_3:+50965597 | Msa1293580:CDS |
| TTCTGGTTTCTTACGGTCCA+AGG | 0.480571 | 8_3:+50966630 | Msa1293580:three_prime_UTR |
| TCATTCCAAGGCACCTGTTG+TGG | 0.481858 | 8_3:+50965743 | Msa1293580:CDS |
| CACCTCTCTGCTTGGCAACA+AGG | 0.490126 | 8_3:-50965663 | None:intergenic |
| ACTTATGACCATTTAGATGT+AGG | 0.499065 | 8_3:-50966713 | None:intergenic |
| CAGCTCCACACCTCTCTGCT+TGG | 0.503571 | 8_3:-50965671 | None:intergenic |
| AATGGAAAATGAAGTAGAAG+AGG | 0.504373 | 8_3:+50965554 | Msa1293580:CDS |
| TTGTGGTGGTTGCAGGGATG+AGG | 0.505992 | 8_3:+50965760 | Msa1293580:CDS |
| AACCACCACAACAGGTGCCT+TGG | 0.507647 | 8_3:-50965748 | None:intergenic |
| AAGAAGCTGCCGCAGGCGGT+TGG | 0.518296 | 8_3:+50966394 | Msa1293580:CDS |
| GGAAAATGAAGTAGAAGAGG+AGG | 0.522072 | 8_3:+50965557 | Msa1293580:CDS |
| GAGGAAGAGAACATTGATGA+TGG | 0.526926 | 8_3:+50965497 | Msa1293580:CDS |
| AATAGGGTTACAACATTCAA+AGG | 0.527736 | 8_3:-50966787 | None:intergenic |
| TTTAGATGTAGGATATTTGG+TGG | 0.531466 | 8_3:-50966702 | None:intergenic |
| GGTGGCGGGAGAAGAGGAGG+TGG | 0.533572 | 8_3:+50965624 | Msa1293580:CDS |
| CACACACTTTATGGCGGCGA+TGG | 0.534636 | 8_3:-50965716 | None:intergenic |
| GCTGTGCAGGTTCCATGACT+TGG | 0.541073 | 8_3:+50966352 | Msa1293580:intron |
| GAAGAGAAGAAGAAAGGGGT+CGG | 0.545505 | 8_3:+50965603 | Msa1293580:CDS |
| CACCTGTTGTGGTGGTTGCA+GGG | 0.546200 | 8_3:+50965754 | Msa1293580:CDS |
| TTCCAAGGCACCTGTTGTGG+TGG | 0.554919 | 8_3:+50965746 | Msa1293580:CDS |
| CTCACAAAACAATGGAAGCT+AGG | 0.561345 | 8_3:+50965466 | Msa1293580:exon |
| AGTGTGTGAGTTTCATTCCA+AGG | 0.564413 | 8_3:+50965731 | Msa1293580:CDS |
| AACCCGGAAGCTGCCAATGA+GGG | 0.564949 | 8_3:+50966446 | Msa1293580:CDS |
| GACTTATAACCAGAACTGCC+TGG | 0.566906 | 8_3:-50966533 | None:intergenic |
| GGTGACAGAAGAGAGAGAGC+TGG | 0.567068 | 8_3:-50966607 | None:intergenic |
| CAACCCGGAAGCTGCCAATG+AGG | 0.568620 | 8_3:+50966445 | Msa1293580:CDS |
| CATCAAACTCTACCAAGTCA+TGG | 0.569400 | 8_3:-50966364 | None:intergenic |
| AACCTAAGGAAACTCAATGC+AGG | 0.572114 | 8_3:+50966495 | Msa1293580:CDS |
| TGATGATGGAAAAGATGAGA+AGG | 0.573354 | 8_3:+50965511 | Msa1293580:CDS |
| CTGGACACAATGAACGGCGC+CGG | 0.573671 | 8_3:+50966417 | Msa1293580:CDS |
| TGTGTCCAGCCAACCGCCTG+CGG | 0.577001 | 8_3:-50966403 | None:intergenic |
| GAGGTGTGGAGCTGATTTGA+CGG | 0.578847 | 8_3:+50965680 | Msa1293580:CDS |
| GAGAAGAAGAAAGGGGTCGG+TGG | 0.581205 | 8_3:+50965606 | Msa1293580:CDS |
| TTGTTGTGATGAACATACAA+AGG | 0.601220 | 8_3:-50966667 | None:intergenic |
| AGTCTAAAAGAAGCTGCCGC+AGG | 0.602245 | 8_3:+50966387 | Msa1293580:CDS |
| ACGGCGCCGGAAAACCAACC+CGG | 0.609142 | 8_3:+50966430 | Msa1293580:CDS |
| CAAAGGACAACATCAACCTA+AGG | 0.609316 | 8_3:+50966481 | Msa1293580:CDS |
| AATGAAGTAGAAGAGGAGGA+GGG | 0.609345 | 8_3:+50965561 | Msa1293580:CDS |
| AGGATTCAGATGAACTTACC+AGG | 0.609388 | 8_3:+50966515 | Msa1293580:CDS |
| CTAAAAGAAGCTGCCGCAGG+CGG | 0.624624 | 8_3:+50966390 | Msa1293580:CDS |
| TGTTGCCAAGCAGAGAGGTG+TGG | 0.631386 | 8_3:+50965666 | Msa1293580:CDS |
| GTTCACCTCTCACAAAACAA+TGG | 0.632717 | 8_3:+50965458 | Msa1293580:exon |
| GAGGGAAGCAGTCACAGCAA+AGG | 0.634063 | 8_3:+50966464 | Msa1293580:CDS |
| TGTGAGAGGTGAACTGACAA+TGG | 0.637177 | 8_3:-50965449 | None:intergenic |
| TTAGATGTAGGATATTTGGT+GGG | 0.641473 | 8_3:-50966701 | None:intergenic |
| CACCTTGTTGCCAAGCAGAG+AGG | 0.641872 | 8_3:+50965661 | Msa1293580:CDS |
| GGTTGGCTGGACACAATGAA+CGG | 0.643542 | 8_3:+50966411 | Msa1293580:CDS |
| CTCTCTGCTTGGCAACAAGG+TGG | 0.645735 | 8_3:-50965660 | None:intergenic |
| TTGGACCGTAAGAAACCAGA+AGG | 0.656890 | 8_3:-50966628 | None:intergenic |
| TGAAGAAGAGAAGAAGAAAG+GGG | 0.662619 | 8_3:+50965599 | Msa1293580:CDS |
| TGGAAGCTAGGAGTATTGAG+AGG | 0.681882 | 8_3:+50965478 | Msa1293580:CDS |
| ACTGACAATGGCTATAAGGG+AGG | 0.683768 | 8_3:-50965437 | None:intergenic |
| GAAACTCACACACTTTATGG+CGG | 0.694059 | 8_3:-50965722 | None:intergenic |
| GATGAGAAGGAACAACATGG+TGG | 0.695331 | 8_3:+50965524 | Msa1293580:CDS |
| AAAGATGAGAAGGAACAACA+TGG | 0.732079 | 8_3:+50965521 | Msa1293580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCAAACAAAAATAATTA+AGG | + | chr8_3:50966017-50966036 | Msa1293580:intron | 15.0% |
| !! | AAGCAAACAAAAATAATTAA+GGG | + | chr8_3:50966018-50966037 | Msa1293580:intron | 15.0% |
| !! | AAAGCAAACAAAAATAATTA+AGG | + | chr8_3:50966017-50966036 | Msa1293580:intron | 15.0% |
| !! | AAGCAAACAAAAATAATTAA+GGG | + | chr8_3:50966018-50966037 | Msa1293580:intron | 15.0% |
| !!! | TTTTCTTTTGACATGTTTAT+AGG | + | chr8_3:50965862-50965881 | Msa1293580:intron | 20.0% |
| !! | AAATCGAATGTTTCAAAAAT+TGG | + | chr8_3:50965940-50965959 | Msa1293580:intron | 20.0% |
| !! | GATTAAGTTATACAATAGTT+CGG | - | chr8_3:50966088-50966107 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTGCAGAAATTT+AGG | - | chr8_3:50966270-50966289 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTGACATGTTTAT+AGG | + | chr8_3:50965862-50965881 | Msa1293580:intron | 20.0% |
| !! | AAATCGAATGTTTCAAAAAT+TGG | + | chr8_3:50965940-50965959 | Msa1293580:intron | 20.0% |
| !! | GATTAAGTTATACAATAGTT+CGG | - | chr8_3:50966088-50966107 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTGCAGAAATTT+AGG | - | chr8_3:50966270-50966289 | None:intergenic | 20.0% |
| ! | CAAACAAAAATAATTAAGGG+AGG | + | chr8_3:50966021-50966040 | Msa1293580:intron | 25.0% |
| ! | ACTATTGTATAACTTAATCC+CGG | + | chr8_3:50966089-50966108 | Msa1293580:intron | 25.0% |
| !!! | TTGAAGCAATGTTTTAAAAC+CGG | - | chr8_3:50966162-50966181 | None:intergenic | 25.0% |
| ! | AAAACTGACCTTAAATATCT+TGG | + | chr8_3:50966223-50966242 | Msa1293580:intron | 25.0% |
| ! | TCCAAAAGAATAAAAAGCTA+CGG | + | chr8_3:50966816-50966835 | Msa1293580:three_prime_UTR | 25.0% |
| ! | CAAACAAAAATAATTAAGGG+AGG | + | chr8_3:50966021-50966040 | Msa1293580:intron | 25.0% |
| ! | ACTATTGTATAACTTAATCC+CGG | + | chr8_3:50966089-50966108 | Msa1293580:intron | 25.0% |
| !!! | TTGAAGCAATGTTTTAAAAC+CGG | - | chr8_3:50966162-50966181 | None:intergenic | 25.0% |
| ! | AAAACTGACCTTAAATATCT+TGG | + | chr8_3:50966223-50966242 | Msa1293580:intron | 25.0% |
| ! | TCCAAAAGAATAAAAAGCTA+CGG | + | chr8_3:50966816-50966835 | Msa1293580:three_prime_UTR | 25.0% |
| ! | ATAGAAGAAGCTTGAGTTTT+GGG | - | chr8_3:50965395-50965414 | None:intergenic | 30.0% |
| ! | AATAGAAGAAGCTTGAGTTT+TGG | - | chr8_3:50965396-50965415 | None:intergenic | 30.0% |
| AATGGAAAATGAAGTAGAAG+AGG | + | chr8_3:50965554-50965573 | Msa1293580:CDS | 30.0% | |
| AATGAAACTCACACACTTTA+TGG | - | chr8_3:50965728-50965747 | None:intergenic | 30.0% | |
| TTGATGAGTGTTAGAGAAAA+TGG | - | chr8_3:50965833-50965852 | None:intergenic | 30.0% | |
| ! | TCTTTTGACATGTTTATAGG+TGG | + | chr8_3:50965865-50965884 | Msa1293580:intron | 30.0% |
| GAGCTAAAAAAACAGATCAT+GGG | - | chr8_3:50965909-50965928 | None:intergenic | 30.0% | |
| TGAGCTAAAAAAACAGATCA+TGG | - | chr8_3:50965910-50965929 | None:intergenic | 30.0% | |
| ! | ATATACTACGCATTGATCAA+TGG | + | chr8_3:50966321-50966340 | Msa1293580:intron | 30.0% |
| TTAGCTTCATCTAATGTTGA+AGG | - | chr8_3:50966558-50966577 | None:intergenic | 30.0% | |
| TTGTTGTGATGAACATACAA+AGG | - | chr8_3:50966670-50966689 | None:intergenic | 30.0% | |
| TTAGATGTAGGATATTTGGT+GGG | - | chr8_3:50966704-50966723 | None:intergenic | 30.0% | |
| TTTAGATGTAGGATATTTGG+TGG | - | chr8_3:50966705-50966724 | None:intergenic | 30.0% | |
| CCATTTAGATGTAGGATATT+TGG | - | chr8_3:50966708-50966727 | None:intergenic | 30.0% | |
| CCAAATATCCTACATCTAAA+TGG | + | chr8_3:50966705-50966724 | Msa1293580:three_prime_UTR | 30.0% | |
| ACTTATGACCATTTAGATGT+AGG | - | chr8_3:50966716-50966735 | None:intergenic | 30.0% | |
| !! | CATTCAAAGGTGCTTTAATA+AGG | - | chr8_3:50966777-50966796 | None:intergenic | 30.0% |
| AATAGGGTTACAACATTCAA+AGG | - | chr8_3:50966790-50966809 | None:intergenic | 30.0% | |
| !!! | TTCTTTTGGAGTGGAAAATA+GGG | - | chr8_3:50966806-50966825 | None:intergenic | 30.0% |
| !!! | ATTCTTTTGGAGTGGAAAAT+AGG | - | chr8_3:50966807-50966826 | None:intergenic | 30.0% |
| !! | AGCTTTTTATTCTTTTGGAG+TGG | - | chr8_3:50966815-50966834 | None:intergenic | 30.0% |
| ! | ATAGAAGAAGCTTGAGTTTT+GGG | - | chr8_3:50965395-50965414 | None:intergenic | 30.0% |
| ! | AATAGAAGAAGCTTGAGTTT+TGG | - | chr8_3:50965396-50965415 | None:intergenic | 30.0% |
| AATGGAAAATGAAGTAGAAG+AGG | + | chr8_3:50965554-50965573 | Msa1293580:CDS | 30.0% | |
| AATGAAACTCACACACTTTA+TGG | - | chr8_3:50965728-50965747 | None:intergenic | 30.0% | |
| TTGATGAGTGTTAGAGAAAA+TGG | - | chr8_3:50965833-50965852 | None:intergenic | 30.0% | |
| ! | TCTTTTGACATGTTTATAGG+TGG | + | chr8_3:50965865-50965884 | Msa1293580:intron | 30.0% |
| GAGCTAAAAAAACAGATCAT+GGG | - | chr8_3:50965909-50965928 | None:intergenic | 30.0% | |
| TGAGCTAAAAAAACAGATCA+TGG | - | chr8_3:50965910-50965929 | None:intergenic | 30.0% | |
| ! | ATATACTACGCATTGATCAA+TGG | + | chr8_3:50966321-50966340 | Msa1293580:intron | 30.0% |
| TTAGCTTCATCTAATGTTGA+AGG | - | chr8_3:50966558-50966577 | None:intergenic | 30.0% | |
| TTGTTGTGATGAACATACAA+AGG | - | chr8_3:50966670-50966689 | None:intergenic | 30.0% | |
| TTAGATGTAGGATATTTGGT+GGG | - | chr8_3:50966704-50966723 | None:intergenic | 30.0% | |
| TTTAGATGTAGGATATTTGG+TGG | - | chr8_3:50966705-50966724 | None:intergenic | 30.0% | |
| CCATTTAGATGTAGGATATT+TGG | - | chr8_3:50966708-50966727 | None:intergenic | 30.0% | |
| CCAAATATCCTACATCTAAA+TGG | + | chr8_3:50966705-50966724 | Msa1293580:three_prime_UTR | 30.0% | |
| ACTTATGACCATTTAGATGT+AGG | - | chr8_3:50966716-50966735 | None:intergenic | 30.0% | |
| !! | CATTCAAAGGTGCTTTAATA+AGG | - | chr8_3:50966777-50966796 | None:intergenic | 30.0% |
| AATAGGGTTACAACATTCAA+AGG | - | chr8_3:50966790-50966809 | None:intergenic | 30.0% | |
| !!! | TTCTTTTGGAGTGGAAAATA+GGG | - | chr8_3:50966806-50966825 | None:intergenic | 30.0% |
| !!! | ATTCTTTTGGAGTGGAAAAT+AGG | - | chr8_3:50966807-50966826 | None:intergenic | 30.0% |
| !! | AGCTTTTTATTCTTTTGGAG+TGG | - | chr8_3:50966815-50966834 | None:intergenic | 30.0% |
| TGAACTGACAATGGCTATAA+GGG | - | chr8_3:50965443-50965462 | None:intergenic | 35.0% | |
| !! | TGATGATGGAAAAGATGAGA+AGG | + | chr8_3:50965511-50965530 | Msa1293580:CDS | 35.0% |
| AAAGATGAGAAGGAACAACA+TGG | + | chr8_3:50965521-50965540 | Msa1293580:CDS | 35.0% | |
| ACTGAAGAAGAGAAGAAGAA+AGG | + | chr8_3:50965597-50965616 | Msa1293580:CDS | 35.0% | |
| CTGAAGAAGAGAAGAAGAAA+GGG | + | chr8_3:50965598-50965617 | Msa1293580:CDS | 35.0% | |
| TGAAGAAGAGAAGAAGAAAG+GGG | + | chr8_3:50965599-50965618 | Msa1293580:CDS | 35.0% | |
| TATTAGACTGTGAGACCTTA+AGG | + | chr8_3:50965969-50965988 | Msa1293580:intron | 35.0% | |
| CCAAGTAAACGATAACCTTA+AGG | - | chr8_3:50965987-50966006 | None:intergenic | 35.0% | |
| CCTTAAGGTTATCGTTTACT+TGG | + | chr8_3:50965984-50966003 | Msa1293580:intron | 35.0% | |
| TCCTATTCAACCGATTGTAA+CGG | - | chr8_3:50966130-50966149 | None:intergenic | 35.0% | |
| TTGAATAGGACACTTTGATC+CGG | + | chr8_3:50966140-50966159 | Msa1293580:intron | 35.0% | |
| GCTCTAGTCCAAGATATTTA+AGG | - | chr8_3:50966234-50966253 | None:intergenic | 35.0% | |
| AGGATCTTTATTCTATGCCT+TGG | - | chr8_3:50966650-50966669 | None:intergenic | 35.0% | |
| ! | AGGATATTTGGTGGGTAATT+AGG | - | chr8_3:50966696-50966715 | None:intergenic | 35.0% |
| ! | GCCGTAGCTTTTTATTCTTT+TGG | - | chr8_3:50966820-50966839 | None:intergenic | 35.0% |
| TGAACTGACAATGGCTATAA+GGG | - | chr8_3:50965443-50965462 | None:intergenic | 35.0% | |
| !! | TGATGATGGAAAAGATGAGA+AGG | + | chr8_3:50965511-50965530 | Msa1293580:CDS | 35.0% |
| AAAGATGAGAAGGAACAACA+TGG | + | chr8_3:50965521-50965540 | Msa1293580:CDS | 35.0% | |
| ACTGAAGAAGAGAAGAAGAA+AGG | + | chr8_3:50965597-50965616 | Msa1293580:CDS | 35.0% | |
| CTGAAGAAGAGAAGAAGAAA+GGG | + | chr8_3:50965598-50965617 | Msa1293580:CDS | 35.0% | |
| TGAAGAAGAGAAGAAGAAAG+GGG | + | chr8_3:50965599-50965618 | Msa1293580:CDS | 35.0% | |
| TATTAGACTGTGAGACCTTA+AGG | + | chr8_3:50965969-50965988 | Msa1293580:intron | 35.0% | |
| CCAAGTAAACGATAACCTTA+AGG | - | chr8_3:50965987-50966006 | None:intergenic | 35.0% | |
| CCTTAAGGTTATCGTTTACT+TGG | + | chr8_3:50965984-50966003 | Msa1293580:intron | 35.0% | |
| TCCTATTCAACCGATTGTAA+CGG | - | chr8_3:50966130-50966149 | None:intergenic | 35.0% | |
| TTGAATAGGACACTTTGATC+CGG | + | chr8_3:50966140-50966159 | Msa1293580:intron | 35.0% | |
| GCTCTAGTCCAAGATATTTA+AGG | - | chr8_3:50966234-50966253 | None:intergenic | 35.0% | |
| AGGATCTTTATTCTATGCCT+TGG | - | chr8_3:50966650-50966669 | None:intergenic | 35.0% | |
| ! | AGGATATTTGGTGGGTAATT+AGG | - | chr8_3:50966696-50966715 | None:intergenic | 35.0% |
| ! | GCCGTAGCTTTTTATTCTTT+TGG | - | chr8_3:50966820-50966839 | None:intergenic | 35.0% |
| GTGAACTGACAATGGCTATA+AGG | - | chr8_3:50965444-50965463 | None:intergenic | 40.0% | |
| GTTCACCTCTCACAAAACAA+TGG | + | chr8_3:50965458-50965477 | Msa1293580:exon | 40.0% | |
| !! | AGCTTCCATTGTTTTGTGAG+AGG | - | chr8_3:50965466-50965485 | None:intergenic | 40.0% |
| CTCACAAAACAATGGAAGCT+AGG | + | chr8_3:50965466-50965485 | Msa1293580:exon | 40.0% | |
| GAGGAAGAGAACATTGATGA+TGG | + | chr8_3:50965497-50965516 | Msa1293580:CDS | 40.0% | |
| ! | CAACATGGTGGAAGAAGAAA+TGG | + | chr8_3:50965536-50965555 | Msa1293580:CDS | 40.0% |
| GGAAAATGAAGTAGAAGAGG+AGG | + | chr8_3:50965557-50965576 | Msa1293580:CDS | 40.0% | |
| AAATGAAGTAGAAGAGGAGG+AGG | + | chr8_3:50965560-50965579 | Msa1293580:CDS | 40.0% | |
| AATGAAGTAGAAGAGGAGGA+GGG | + | chr8_3:50965561-50965580 | Msa1293580:CDS | 40.0% | |
| GAAACTCACACACTTTATGG+CGG | - | chr8_3:50965725-50965744 | None:intergenic | 40.0% | |
| AGTGTGTGAGTTTCATTCCA+AGG | + | chr8_3:50965731-50965750 | Msa1293580:CDS | 40.0% | |
| !! | GGTTTTGTCAACAATGTAGC+AGG | + | chr8_3:50965787-50965806 | Msa1293580:CDS | 40.0% |
| ATCAGATCAGTCACTTCAAC+TGG | + | chr8_3:50966057-50966076 | Msa1293580:intron | 40.0% | |
| ATAACTTAATCCCGGCGAAT+TGG | + | chr8_3:50966097-50966116 | Msa1293580:intron | 40.0% | |
| CCTATTCAACCGATTGTAAC+GGG | - | chr8_3:50966129-50966148 | None:intergenic | 40.0% | |
| CATCAAACTCTACCAAGTCA+TGG | - | chr8_3:50966367-50966386 | None:intergenic | 40.0% | |
| CAAAGGACAACATCAACCTA+AGG | + | chr8_3:50966481-50966500 | Msa1293580:CDS | 40.0% | |
| AACCTAAGGAAACTCAATGC+AGG | + | chr8_3:50966495-50966514 | Msa1293580:CDS | 40.0% | |
| ATCCTGCATTGAGTTTCCTT+AGG | - | chr8_3:50966500-50966519 | None:intergenic | 40.0% | |
| AGGATTCAGATGAACTTACC+AGG | + | chr8_3:50966515-50966534 | Msa1293580:CDS | 40.0% | |
| !! | TGTCACCTTCTGGTTTCTTA+CGG | + | chr8_3:50966623-50966642 | Msa1293580:three_prime_UTR | 40.0% |
| GTGAACTGACAATGGCTATA+AGG | - | chr8_3:50965444-50965463 | None:intergenic | 40.0% | |
| GTTCACCTCTCACAAAACAA+TGG | + | chr8_3:50965458-50965477 | Msa1293580:exon | 40.0% | |
| !! | AGCTTCCATTGTTTTGTGAG+AGG | - | chr8_3:50965466-50965485 | None:intergenic | 40.0% |
| CTCACAAAACAATGGAAGCT+AGG | + | chr8_3:50965466-50965485 | Msa1293580:exon | 40.0% | |
| GAGGAAGAGAACATTGATGA+TGG | + | chr8_3:50965497-50965516 | Msa1293580:CDS | 40.0% | |
| ! | CAACATGGTGGAAGAAGAAA+TGG | + | chr8_3:50965536-50965555 | Msa1293580:CDS | 40.0% |
| GGAAAATGAAGTAGAAGAGG+AGG | + | chr8_3:50965557-50965576 | Msa1293580:CDS | 40.0% | |
| AAATGAAGTAGAAGAGGAGG+AGG | + | chr8_3:50965560-50965579 | Msa1293580:CDS | 40.0% | |
| AATGAAGTAGAAGAGGAGGA+GGG | + | chr8_3:50965561-50965580 | Msa1293580:CDS | 40.0% | |
| GAAACTCACACACTTTATGG+CGG | - | chr8_3:50965725-50965744 | None:intergenic | 40.0% | |
| AGTGTGTGAGTTTCATTCCA+AGG | + | chr8_3:50965731-50965750 | Msa1293580:CDS | 40.0% | |
| !! | GGTTTTGTCAACAATGTAGC+AGG | + | chr8_3:50965787-50965806 | Msa1293580:CDS | 40.0% |
| ATCAGATCAGTCACTTCAAC+TGG | + | chr8_3:50966057-50966076 | Msa1293580:intron | 40.0% | |
| ATAACTTAATCCCGGCGAAT+TGG | + | chr8_3:50966097-50966116 | Msa1293580:intron | 40.0% | |
| CCTATTCAACCGATTGTAAC+GGG | - | chr8_3:50966129-50966148 | None:intergenic | 40.0% | |
| CATCAAACTCTACCAAGTCA+TGG | - | chr8_3:50966367-50966386 | None:intergenic | 40.0% | |
| CAAAGGACAACATCAACCTA+AGG | + | chr8_3:50966481-50966500 | Msa1293580:CDS | 40.0% | |
| AACCTAAGGAAACTCAATGC+AGG | + | chr8_3:50966495-50966514 | Msa1293580:CDS | 40.0% | |
| ATCCTGCATTGAGTTTCCTT+AGG | - | chr8_3:50966500-50966519 | None:intergenic | 40.0% | |
| AGGATTCAGATGAACTTACC+AGG | + | chr8_3:50966515-50966534 | Msa1293580:CDS | 40.0% | |
| !! | TGTCACCTTCTGGTTTCTTA+CGG | + | chr8_3:50966623-50966642 | Msa1293580:three_prime_UTR | 40.0% |
| ACTGACAATGGCTATAAGGG+AGG | - | chr8_3:50965440-50965459 | None:intergenic | 45.0% | |
| TGTGAGAGGTGAACTGACAA+TGG | - | chr8_3:50965452-50965471 | None:intergenic | 45.0% | |
| !! | TGGAAGCTAGGAGTATTGAG+AGG | + | chr8_3:50965478-50965497 | Msa1293580:CDS | 45.0% |
| GATGAGAAGGAACAACATGG+TGG | + | chr8_3:50965524-50965543 | Msa1293580:CDS | 45.0% | |
| GAAGAGAAGAAGAAAGGGGT+CGG | + | chr8_3:50965603-50965622 | Msa1293580:CDS | 45.0% | |
| TGGCCAATTCCCGTTACAAT+CGG | + | chr8_3:50966117-50966136 | Msa1293580:intron | 45.0% | |
| ! | CAACCGATTGTAACGGGAAT+TGG | - | chr8_3:50966123-50966142 | None:intergenic | 45.0% |
| CCCGTTACAATCGGTTGAAT+AGG | + | chr8_3:50966126-50966145 | Msa1293580:intron | 45.0% | |
| ATGAACTTACCAGGCAGTTC+TGG | + | chr8_3:50966524-50966543 | Msa1293580:CDS | 45.0% | |
| GACTTATAACCAGAACTGCC+TGG | - | chr8_3:50966536-50966555 | None:intergenic | 45.0% | |
| TTGGACCGTAAGAAACCAGA+AGG | - | chr8_3:50966631-50966650 | None:intergenic | 45.0% | |
| !! | TTCTGGTTTCTTACGGTCCA+AGG | + | chr8_3:50966630-50966649 | Msa1293580:three_prime_UTR | 45.0% |
| ACTGACAATGGCTATAAGGG+AGG | - | chr8_3:50965440-50965459 | None:intergenic | 45.0% | |
| TGTGAGAGGTGAACTGACAA+TGG | - | chr8_3:50965452-50965471 | None:intergenic | 45.0% | |
| !! | TGGAAGCTAGGAGTATTGAG+AGG | + | chr8_3:50965478-50965497 | Msa1293580:CDS | 45.0% |
| GATGAGAAGGAACAACATGG+TGG | + | chr8_3:50965524-50965543 | Msa1293580:CDS | 45.0% | |
| GAAGAGAAGAAGAAAGGGGT+CGG | + | chr8_3:50965603-50965622 | Msa1293580:CDS | 45.0% | |
| TGGCCAATTCCCGTTACAAT+CGG | + | chr8_3:50966117-50966136 | Msa1293580:intron | 45.0% | |
| ! | CAACCGATTGTAACGGGAAT+TGG | - | chr8_3:50966123-50966142 | None:intergenic | 45.0% |
| CCCGTTACAATCGGTTGAAT+AGG | + | chr8_3:50966126-50966145 | Msa1293580:intron | 45.0% | |
| ATGAACTTACCAGGCAGTTC+TGG | + | chr8_3:50966524-50966543 | Msa1293580:CDS | 45.0% | |
| GACTTATAACCAGAACTGCC+TGG | - | chr8_3:50966536-50966555 | None:intergenic | 45.0% | |
| TTGGACCGTAAGAAACCAGA+AGG | - | chr8_3:50966631-50966650 | None:intergenic | 45.0% | |
| !! | TTCTGGTTTCTTACGGTCCA+AGG | + | chr8_3:50966630-50966649 | Msa1293580:three_prime_UTR | 45.0% |
| !! | GAGGTGTGGAGCTGATTTGA+CGG | + | chr8_3:50965680-50965699 | Msa1293580:CDS | 50.0% |
| ! | TCATTCCAAGGCACCTGTTG+TGG | + | chr8_3:50965743-50965762 | Msa1293580:CDS | 50.0% |
| AATGGCGAGTTATGCTGTGC+AGG | + | chr8_3:50966339-50966358 | Msa1293580:intron | 50.0% | |
| AGTCTAAAAGAAGCTGCCGC+AGG | + | chr8_3:50966387-50966406 | Msa1293580:CDS | 50.0% | |
| ! | GGTTGGCTGGACACAATGAA+CGG | + | chr8_3:50966411-50966430 | Msa1293580:CDS | 50.0% |
| CTCTCTCTTCTGTCACCTTC+TGG | + | chr8_3:50966613-50966632 | Msa1293580:three_prime_UTR | 50.0% | |
| !! | GAGGTGTGGAGCTGATTTGA+CGG | + | chr8_3:50965680-50965699 | Msa1293580:CDS | 50.0% |
| ! | TCATTCCAAGGCACCTGTTG+TGG | + | chr8_3:50965743-50965762 | Msa1293580:CDS | 50.0% |
| AATGGCGAGTTATGCTGTGC+AGG | + | chr8_3:50966339-50966358 | Msa1293580:intron | 50.0% | |
| AGTCTAAAAGAAGCTGCCGC+AGG | + | chr8_3:50966387-50966406 | Msa1293580:CDS | 50.0% | |
| ! | GGTTGGCTGGACACAATGAA+CGG | + | chr8_3:50966411-50966430 | Msa1293580:CDS | 50.0% |
| CTCTCTCTTCTGTCACCTTC+TGG | + | chr8_3:50966613-50966632 | Msa1293580:three_prime_UTR | 50.0% | |
| GAGAAGAAGAAAGGGGTCGG+TGG | + | chr8_3:50965606-50965625 | Msa1293580:CDS | 55.0% | |
| AAGAAGAAAGGGGTCGGTGG+CGG | + | chr8_3:50965609-50965628 | Msa1293580:CDS | 55.0% | |
| CTCTCTGCTTGGCAACAAGG+TGG | - | chr8_3:50965663-50965682 | None:intergenic | 55.0% | |
| CACCTTGTTGCCAAGCAGAG+AGG | + | chr8_3:50965661-50965680 | Msa1293580:CDS | 55.0% | |
| CACCTCTCTGCTTGGCAACA+AGG | - | chr8_3:50965666-50965685 | None:intergenic | 55.0% | |
| TGTTGCCAAGCAGAGAGGTG+TGG | + | chr8_3:50965666-50965685 | Msa1293580:CDS | 55.0% | |
| CACACACTTTATGGCGGCGA+TGG | - | chr8_3:50965719-50965738 | None:intergenic | 55.0% | |
| ! | TTCCAAGGCACCTGTTGTGG+TGG | + | chr8_3:50965746-50965765 | Msa1293580:CDS | 55.0% |
| AACCACCACAACAGGTGCCT+TGG | - | chr8_3:50965751-50965770 | None:intergenic | 55.0% | |
| CACCTGTTGTGGTGGTTGCA+GGG | + | chr8_3:50965754-50965773 | Msa1293580:CDS | 55.0% | |
| ATCCCTGCAACCACCACAAC+AGG | - | chr8_3:50965759-50965778 | None:intergenic | 55.0% | |
| TTGTGGTGGTTGCAGGGATG+AGG | + | chr8_3:50965760-50965779 | Msa1293580:CDS | 55.0% | |
| ACGGGAATTGGCCAATTCGC+CGG | - | chr8_3:50966111-50966130 | None:intergenic | 55.0% | |
| GCTGTGCAGGTTCCATGACT+TGG | + | chr8_3:50966352-50966371 | Msa1293580:intron | 55.0% | |
| CTAAAAGAAGCTGCCGCAGG+CGG | + | chr8_3:50966390-50966409 | Msa1293580:CDS | 55.0% | |
| !!! | CAGCTTCCGGGTTGGTTTTC+CGG | - | chr8_3:50966439-50966458 | None:intergenic | 55.0% |
| AACCCGGAAGCTGCCAATGA+GGG | + | chr8_3:50966446-50966465 | Msa1293580:CDS | 55.0% | |
| TTCCCTCATTGGCAGCTTCC+GGG | - | chr8_3:50966451-50966470 | None:intergenic | 55.0% | |
| CTTCCCTCATTGGCAGCTTC+CGG | - | chr8_3:50966452-50966471 | None:intergenic | 55.0% | |
| GCTGTGACTGCTTCCCTCAT+TGG | - | chr8_3:50966462-50966481 | None:intergenic | 55.0% | |
| GAGGGAAGCAGTCACAGCAA+AGG | + | chr8_3:50966464-50966483 | Msa1293580:CDS | 55.0% | |
| GGTGACAGAAGAGAGAGAGC+TGG | - | chr8_3:50966610-50966629 | None:intergenic | 55.0% | |
| GAGAAGAAGAAAGGGGTCGG+TGG | + | chr8_3:50965606-50965625 | Msa1293580:CDS | 55.0% | |
| AAGAAGAAAGGGGTCGGTGG+CGG | + | chr8_3:50965609-50965628 | Msa1293580:CDS | 55.0% | |
| CTCTCTGCTTGGCAACAAGG+TGG | - | chr8_3:50965663-50965682 | None:intergenic | 55.0% | |
| CACCTTGTTGCCAAGCAGAG+AGG | + | chr8_3:50965661-50965680 | Msa1293580:CDS | 55.0% | |
| CACCTCTCTGCTTGGCAACA+AGG | - | chr8_3:50965666-50965685 | None:intergenic | 55.0% | |
| TGTTGCCAAGCAGAGAGGTG+TGG | + | chr8_3:50965666-50965685 | Msa1293580:CDS | 55.0% | |
| CACACACTTTATGGCGGCGA+TGG | - | chr8_3:50965719-50965738 | None:intergenic | 55.0% | |
| ! | TTCCAAGGCACCTGTTGTGG+TGG | + | chr8_3:50965746-50965765 | Msa1293580:CDS | 55.0% |
| AACCACCACAACAGGTGCCT+TGG | - | chr8_3:50965751-50965770 | None:intergenic | 55.0% | |
| CACCTGTTGTGGTGGTTGCA+GGG | + | chr8_3:50965754-50965773 | Msa1293580:CDS | 55.0% | |
| ATCCCTGCAACCACCACAAC+AGG | - | chr8_3:50965759-50965778 | None:intergenic | 55.0% | |
| TTGTGGTGGTTGCAGGGATG+AGG | + | chr8_3:50965760-50965779 | Msa1293580:CDS | 55.0% | |
| ACGGGAATTGGCCAATTCGC+CGG | - | chr8_3:50966111-50966130 | None:intergenic | 55.0% | |
| GCTGTGCAGGTTCCATGACT+TGG | + | chr8_3:50966352-50966371 | Msa1293580:intron | 55.0% | |
| CTAAAAGAAGCTGCCGCAGG+CGG | + | chr8_3:50966390-50966409 | Msa1293580:CDS | 55.0% | |
| !!! | CAGCTTCCGGGTTGGTTTTC+CGG | - | chr8_3:50966439-50966458 | None:intergenic | 55.0% |
| AACCCGGAAGCTGCCAATGA+GGG | + | chr8_3:50966446-50966465 | Msa1293580:CDS | 55.0% | |
| TTCCCTCATTGGCAGCTTCC+GGG | - | chr8_3:50966451-50966470 | None:intergenic | 55.0% | |
| CTTCCCTCATTGGCAGCTTC+CGG | - | chr8_3:50966452-50966471 | None:intergenic | 55.0% | |
| GCTGTGACTGCTTCCCTCAT+TGG | - | chr8_3:50966462-50966481 | None:intergenic | 55.0% | |
| GAGGGAAGCAGTCACAGCAA+AGG | + | chr8_3:50966464-50966483 | Msa1293580:CDS | 55.0% | |
| GGTGACAGAAGAGAGAGAGC+TGG | - | chr8_3:50966610-50966629 | None:intergenic | 55.0% | |
| AGAAGAAAGGGGTCGGTGGC+GGG | + | chr8_3:50965610-50965629 | Msa1293580:CDS | 60.0% | |
| CAGCTCCACACCTCTCTGCT+TGG | - | chr8_3:50965674-50965693 | None:intergenic | 60.0% | |
| GCACCTGTTGTGGTGGTTGC+AGG | + | chr8_3:50965753-50965772 | Msa1293580:CDS | 60.0% | |
| TGGTTGCAGGGATGAGGCAG+AGG | + | chr8_3:50965766-50965785 | Msa1293580:CDS | 60.0% | |
| CGGGAATTGGCCAATTCGCC+GGG | - | chr8_3:50966110-50966129 | None:intergenic | 60.0% | |
| CTGGACACAATGAACGGCGC+CGG | + | chr8_3:50966417-50966436 | Msa1293580:CDS | 60.0% | |
| CTCATTGGCAGCTTCCGGGT+TGG | - | chr8_3:50966447-50966466 | None:intergenic | 60.0% | |
| CAACCCGGAAGCTGCCAATG+AGG | + | chr8_3:50966445-50966464 | Msa1293580:CDS | 60.0% | |
| AGAAGAAAGGGGTCGGTGGC+GGG | + | chr8_3:50965610-50965629 | Msa1293580:CDS | 60.0% | |
| CAGCTCCACACCTCTCTGCT+TGG | - | chr8_3:50965674-50965693 | None:intergenic | 60.0% | |
| GCACCTGTTGTGGTGGTTGC+AGG | + | chr8_3:50965753-50965772 | Msa1293580:CDS | 60.0% | |
| TGGTTGCAGGGATGAGGCAG+AGG | + | chr8_3:50965766-50965785 | Msa1293580:CDS | 60.0% | |
| CGGGAATTGGCCAATTCGCC+GGG | - | chr8_3:50966110-50966129 | None:intergenic | 60.0% | |
| CTGGACACAATGAACGGCGC+CGG | + | chr8_3:50966417-50966436 | Msa1293580:CDS | 60.0% | |
| CTCATTGGCAGCTTCCGGGT+TGG | - | chr8_3:50966447-50966466 | None:intergenic | 60.0% | |
| CAACCCGGAAGCTGCCAATG+AGG | + | chr8_3:50966445-50966464 | Msa1293580:CDS | 60.0% | |
| ! | GGGAGAAGAGGAGGTGGTGG+CGG | + | chr8_3:50965630-50965649 | Msa1293580:CDS | 65.0% |
| AAGAAGCTGCCGCAGGCGGT+TGG | + | chr8_3:50966394-50966413 | Msa1293580:CDS | 65.0% | |
| TGTGTCCAGCCAACCGCCTG+CGG | - | chr8_3:50966406-50966425 | None:intergenic | 65.0% | |
| ! | ACGGCGCCGGAAAACCAACC+CGG | + | chr8_3:50966430-50966449 | Msa1293580:CDS | 65.0% |
| ! | GGGAGAAGAGGAGGTGGTGG+CGG | + | chr8_3:50965630-50965649 | Msa1293580:CDS | 65.0% |
| AAGAAGCTGCCGCAGGCGGT+TGG | + | chr8_3:50966394-50966413 | Msa1293580:CDS | 65.0% | |
| TGTGTCCAGCCAACCGCCTG+CGG | - | chr8_3:50966406-50966425 | None:intergenic | 65.0% | |
| ! | ACGGCGCCGGAAAACCAACC+CGG | + | chr8_3:50966430-50966449 | Msa1293580:CDS | 65.0% |
| !! | GTCGGTGGCGGGAGAAGAGG+AGG | + | chr8_3:50965621-50965640 | Msa1293580:CDS | 70.0% |
| !! | GGTGGCGGGAGAAGAGGAGG+TGG | + | chr8_3:50965624-50965643 | Msa1293580:CDS | 70.0% |
| GGCGGGAGAAGAGGAGGTGG+TGG | + | chr8_3:50965627-50965646 | Msa1293580:CDS | 70.0% | |
| !! | GTCGGTGGCGGGAGAAGAGG+AGG | + | chr8_3:50965621-50965640 | Msa1293580:CDS | 70.0% |
| !! | GGTGGCGGGAGAAGAGGAGG+TGG | + | chr8_3:50965624-50965643 | Msa1293580:CDS | 70.0% |
| GGCGGGAGAAGAGGAGGTGG+TGG | + | chr8_3:50965627-50965646 | Msa1293580:CDS | 70.0% | |
| !! | GGGGTCGGTGGCGGGAGAAG+AGG | + | chr8_3:50965618-50965637 | Msa1293580:CDS | 75.0% |
| AGCTGCCGCAGGCGGTTGGC+TGG | + | chr8_3:50966398-50966417 | Msa1293580:CDS | 75.0% | |
| !! | GGGGTCGGTGGCGGGAGAAG+AGG | + | chr8_3:50965618-50965637 | Msa1293580:CDS | 75.0% |
| AGCTGCCGCAGGCGGTTGGC+TGG | + | chr8_3:50966398-50966417 | Msa1293580:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 50965392 | 50966847 | 50965392 | ID=Msa1293580;Name=Msa1293580 |
| chr8_3 | mRNA | 50965392 | 50966847 | 50965392 | ID=Msa1293580-mRNA-1;Parent=Msa1293580;Name=Msa1293580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=85|1|1|1|1|1|2|276|180 |
| chr8_3 | exon | 50965392 | 50965808 | 50965392 | ID=Msa1293580-mRNA-1:exon:14165;Parent=Msa1293580-mRNA-1 |
| chr8_3 | exon | 50966361 | 50966847 | 50966361 | ID=Msa1293580-mRNA-1:exon:14166;Parent=Msa1293580-mRNA-1 |
| chr8_3 | five_prime_UTR | 50965392 | 50965476 | 50965392 | ID=Msa1293580-mRNA-1:five_prime_utr;Parent=Msa1293580-mRNA-1 |
| chr8_3 | CDS | 50965477 | 50965808 | 50965477 | ID=Msa1293580-mRNA-1:cds;Parent=Msa1293580-mRNA-1 |
| chr8_3 | CDS | 50966361 | 50966571 | 50966361 | ID=Msa1293580-mRNA-1:cds;Parent=Msa1293580-mRNA-1 |
| chr8_3 | three_prime_UTR | 50966572 | 50966847 | 50966572 | ID=Msa1293580-mRNA-1:three_prime_utr;Parent=Msa1293580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
