AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0753330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753330 MtrunA17_Chr5g0397701 94.685 508 21 1 1 508 1 502 0.0 971
Msa0753330 MtrunA17_Chr8g0349371 57.950 478 189 6 37 506 20 493 0.0 583
Msa0753330 MtrunA17_Chr8g0349361 55.010 509 205 9 3 504 17 508 0.0 581
Msa0753330 MtrunA17_Chr6g0471441 60.325 431 159 4 84 505 75 502 0.0 556
Msa0753330 MtrunA17_Chr8g0349241 56.481 432 176 5 73 497 62 488 3.03e-179 512
Msa0753330 MtrunA17_Chr7g0247251 52.141 397 177 4 91 477 3 396 4.60e-160 460
Msa0753330 MtrunA17_Chr7g0247261 50.839 417 188 7 73 477 32 443 2.10e-158 457
Msa0753330 MtrunA17_Chr3g0104841 42.308 468 245 13 20 475 11 465 7.24e-123 367
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0753330 AT5G23850.1 60.460 435 156 5 83 504 103 534 0.0 566
Msa0753330 AT3G48980.2 57.727 440 166 6 83 505 102 538 0.0 555
Msa0753330 AT3G48980.1 57.727 440 166 6 83 505 96 532 0.0 555
Msa0753330 AT1G63420.1 61.594 414 142 4 107 505 164 575 0.0 551
Msa0753330 AT2G45830.4 50.511 489 217 6 26 503 39 513 0.0 522
Msa0753330 AT2G45830.1 50.511 489 217 6 26 503 39 513 0.0 522
Msa0753330 AT3G61270.1 55.792 423 178 3 90 506 74 493 0.0 519
Msa0753330 AT3G61270.2 57.029 377 153 3 136 506 1 374 7.41e-165 472
Msa0753330 AT2G45830.3 57.333 375 150 3 136 503 1 372 2.17e-164 471
Msa0753330 AT2G45830.6 57.333 375 150 3 136 503 1 372 2.17e-164 471
Msa0753330 AT2G45830.2 57.333 375 150 3 136 503 1 372 2.17e-164 471
Msa0753330 AT2G45830.5 57.333 375 150 3 136 503 1 372 2.17e-164 471
Msa0753330 AT3G61280.1 47.714 503 242 8 17 504 34 530 2.08e-163 474
Msa0753330 AT2G45840.1 50.577 433 194 4 84 505 92 515 2.74e-159 463
Msa0753330 AT3G61290.1 49.543 438 197 6 84 506 18 446 7.07e-152 442
Msa0753330 AT1G63420.2 65.878 296 88 3 107 391 164 457 1.44e-143 421
Msa0753330 AT1G07220.1 48.907 366 176 7 113 474 115 473 2.91e-129 385
Msa0753330 AT3G61280.2 46.154 325 155 7 17 327 34 352 1.42e-89 279

Find 122 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAGAACCTTATGCTTAT+TGG 0.143284 5_2:-6992711 Msa0753330:CDS
TGCAACATTATTGGCCTATA+AGG 0.166068 5_2:-6992203 Msa0753330:CDS
TACAGCCATTGCAACATTAT+TGG 0.224609 5_2:-6992212 Msa0753330:CDS
CATTTGTCAGTGTCCCTTAT+AGG 0.257990 5_2:+6992189 None:intergenic
GCCTGTTGTGCCCATGGGCT+TGG 0.290931 5_2:-6993403 Msa0753330:CDS
CTGCTTTCATCTCTTCCCTC+TGG 0.298937 5_2:-6994194 Msa0753330:CDS
ACTTGACAGGTACAGGAAAT+TGG 0.312878 5_2:-6991833 Msa0753330:intron
TTTCCCTGACTGGTCCTTCT+GGG 0.316015 5_2:-6993328 Msa0753330:CDS
CCCAAGCCCATGGGCACAAC+AGG 0.325244 5_2:+6993402 None:intergenic
CACATCTCCACGGCTCCTTC+AGG 0.338213 5_2:+6991698 None:intergenic
ACAGTGTTTGTTGTTGTTGT+TGG 0.341053 5_2:+6993858 None:intergenic
AATTACTGCTTGAACATGTT+TGG 0.343612 5_2:+6993733 None:intergenic
CCAATCAACTGCATGTTTGA+TGG 0.347036 5_2:+6992161 None:intergenic
AGGAACATTTGCTGCTACTA+AGG 0.351381 5_2:+6993824 None:intergenic
TGGAATATTCATTTAGCAAA+TGG 0.360170 5_2:+6991747 None:intergenic
TGCTTTCATCTCTTCCCTCT+GGG 0.365328 5_2:-6994193 Msa0753330:intron
CCATCAAACATGCAGTTGAT+TGG 0.367325 5_2:-6992161 Msa0753330:CDS
GCAACATTATTGGCCTATAA+GGG 0.371026 5_2:-6992202 Msa0753330:CDS
AGTCGTGTTGCAGCAGTATA+AGG 0.373600 5_2:+6992679 None:intergenic
CCTGTTGTGCCCATGGGCTT+GGG 0.374284 5_2:-6993402 Msa0753330:CDS
CATCAAACATGCAGTTGATT+GGG 0.374429 5_2:-6992160 Msa0753330:CDS
TCAGGGCTGAGATTAATATA+AGG 0.381406 5_2:-6992792 Msa0753330:intron
TTATGAGTGAATCCATGGTT+AGG 0.390989 5_2:-6991628 Msa0753330:CDS
AGAGGTGGGAAGATGAATAT+TGG 0.400013 5_2:-6991505 Msa0753330:CDS
TGAACATGTTTGGTTCTTGA+TGG 0.403380 5_2:+6993743 None:intergenic
AGAGAAGTGTAAAGAGTGGC+AGG 0.411094 5_2:+6994243 None:intergenic
CATTTGCTGCTACTAAGGTT+TGG 0.412482 5_2:+6993829 None:intergenic
CTGAGATTAATATAAGGCCT+TGG 0.412673 5_2:-6992786 Msa0753330:CDS
ATTAGTAATAATAATTCAAA+AGG 0.415030 5_2:-6994392 Msa0753330:five_prime_UTR
TTTCCTTTCCAATAAGCATA+AGG 0.416388 5_2:+6992703 None:intergenic
CTAAGTGATGTGGGATCAAA+TGG 0.418582 5_2:+6991569 None:intergenic
CTGACTGGTCCTTCTGGGGT+TGG 0.423962 5_2:-6993323 Msa0753330:intron
CTTGTGCAAGCCATGGTCTC+CGG 0.424836 5_2:+6991674 None:intergenic
GGATGAATGTGATGTGAGAT+TGG 0.428549 5_2:-6994371 Msa0753330:five_prime_UTR
AGATACAAAGTTTATATTGA+AGG 0.435834 5_2:-6992330 Msa0753330:CDS
CCCTGGTAAAATTCCAGACT+TGG 0.439877 5_2:-6993451 Msa0753330:CDS
GGCTTGCACAAGATCATATT+CGG 0.443269 5_2:-6991663 Msa0753330:CDS
AAAAGGAATAACGAGAGAAA+TGG 0.456201 5_2:-6993616 Msa0753330:CDS
AGGTGGTGGGCCCAAGCCCA+TGG 0.463656 5_2:+6993392 None:intergenic
TCAAACATGAGTTCCAAGTC+TGG 0.465096 5_2:+6993438 None:intergenic
GGATCAAATGGAGGAGGCAA+GGG 0.468934 5_2:+6991581 None:intergenic
ACGGCTCCTTCAGGAACTCT+TGG 0.477411 5_2:+6991707 None:intergenic
GTGCGTATGTATTTGCTCAT+TGG 0.480358 5_2:+6991474 None:intergenic
ACTGTACCTGCGTAAATAAA+CGG 0.480417 5_2:+6992611 None:intergenic
TATGAGTGAATCCATGGTTA+GGG 0.480560 5_2:-6991627 Msa0753330:CDS
GTACAGGAAATTGGTAAAGC+CGG 0.483609 5_2:-6991824 Msa0753330:CDS
TGGCTCAAACTCGAGAAGCT+TGG 0.486727 5_2:+6991727 None:intergenic
AATGGAGGAGGCAAGGGGCA+AGG 0.487872 5_2:+6991587 None:intergenic
CAACCCCAGAAGGACCAGTC+AGG 0.488262 5_2:+6993324 None:intergenic
ATGGAGGAGGCAAGGGGCAA+GGG 0.489670 5_2:+6991588 None:intergenic
TCTTCATGAATGAATTCTGA+TGG 0.492019 5_2:+6994301 None:intergenic
GAACCTTATGCTTATTGGAA+AGG 0.492867 5_2:-6992706 Msa0753330:CDS
ATGTTTCAACCGCACAGGAT+TGG 0.493210 5_2:-6992639 Msa0753330:CDS
CATTTGATCCCACATCACTT+AGG 0.497579 5_2:-6991568 Msa0753330:CDS
TGGCAGACCAATGTACATAT+AGG 0.498282 5_2:-6992462 Msa0753330:intron
TTCTTGAATAAACTTGCTCC+CGG 0.505080 5_2:+6991805 None:intergenic
TTGTAATGTTTCAACCGCAC+AGG 0.505206 5_2:-6992644 Msa0753330:CDS
GAAATTTATGAGTGAATCCA+TGG 0.508746 5_2:-6991633 Msa0753330:CDS
CAGGAGTCTTTCTGAGAAGA+AGG 0.509789 5_2:+6994262 None:intergenic
TTGTGCAAGCCATGGTCTCC+GGG 0.511415 5_2:+6991675 None:intergenic
TGAGATTAATATAAGGCCTT+GGG 0.511476 5_2:-6992785 Msa0753330:CDS
CGGTTGAAACATTACAATTG+AGG 0.511958 5_2:+6992650 None:intergenic
AGGAATAACGAGAGAAATGG+TGG 0.512055 5_2:-6993613 Msa0753330:CDS
TACAGGAAATTGGTAAAGCC+GGG 0.515192 5_2:-6991823 Msa0753330:CDS
GAGGCTTCACTAATAGTGTA+GGG 0.515936 5_2:+6992262 None:intergenic
ATGGTACAATTCAGTACTGT+TGG 0.518317 5_2:+6993762 None:intergenic
CGAGGCTTCACTAATAGTGT+AGG 0.521509 5_2:+6992261 None:intergenic
CATCTTCCCACCTCTCAACT+CGG 0.523375 5_2:+6991513 None:intergenic
TGATAAGCCTGTTGTGCCCA+TGG 0.523385 5_2:-6993409 Msa0753330:CDS
GATGAATGTGATGTGAGATT+GGG 0.528842 5_2:-6994370 Msa0753330:five_prime_UTR
TATGTCCGGAGTATTTCAAA+TGG 0.530428 5_2:-6993668 Msa0753330:CDS
GAGAAGAGAAGTGTAAAGAG+TGG 0.530743 5_2:+6994239 None:intergenic
GGGATCAAATGGAGGAGGCA+AGG 0.532099 5_2:+6991580 None:intergenic
GGAGATGTGCCCGGAGACCA+TGG 0.536537 5_2:-6991684 Msa0753330:CDS
TTCCCTGACTGGTCCTTCTG+GGG 0.537571 5_2:-6993327 Msa0753330:CDS
AGGATTCAATCACTCAAACT+TGG 0.539657 5_2:-6992482 Msa0753330:CDS
AGGAGCCGTGGAGATGTGCC+CGG 0.545726 5_2:-6991693 Msa0753330:CDS
TAGCAATGCAAATAGTAAGC+TGG 0.553109 5_2:-6991432 Msa0753330:three_prime_UTR
TTTGTATTTCTATAACTCAA+AGG 0.553445 5_2:+6991374 None:intergenic
TAATAGTGTAGGGGAATCAC+AGG 0.553816 5_2:+6992272 None:intergenic
TGATGGAGTGTGGAAGCTCT+AGG 0.554092 5_2:+6994318 None:intergenic
GGTGGAGAAAGCAAAGAAAA+CGG 0.555442 5_2:-6993595 Msa0753330:CDS
AGATGAAAGCAGCGGTGATG+AGG 0.558418 5_2:+6994205 None:intergenic
TAATCAACCGAGTTGAGAGG+TGG 0.563561 5_2:-6991520 Msa0753330:CDS
TGTAGAAGGTTCCCTAACCA+TGG 0.568492 5_2:+6991616 None:intergenic
AAGCAGCGGTGATGAGGATG+AGG 0.570960 5_2:+6994211 None:intergenic
GGAACTACCTATATGTACAT+TGG 0.572220 5_2:+6992455 None:intergenic
AAGAGTTCCTGAAGGAGCCG+TGG 0.572482 5_2:-6991705 Msa0753330:CDS
GGTGGTGGGCCCAAGCCCAT+GGG 0.576300 5_2:+6993393 None:intergenic
TTCACGAGGATCTAAAACCA+TGG 0.579924 5_2:-6993644 Msa0753330:CDS
AATAATGTTGCAATGGCTGT+AGG 0.584450 5_2:+6992214 None:intergenic
ATCAAACATGCAGTTGATTG+GGG 0.586497 5_2:-6992159 Msa0753330:CDS
ATATGATCTTGTGCAAGCCA+TGG 0.588656 5_2:+6991667 None:intergenic
TGAATCCATTTGAAATACTC+CGG 0.590414 5_2:+6993663 None:intergenic
TGGATTAAAGAGTCTGAACA+AGG 0.592715 5_2:-6992502 Msa0753330:CDS
ATAGGCCAATAATGTTGCAA+TGG 0.599822 5_2:+6992207 None:intergenic
TCCTTCAGAAGATGTTCCCA+AGG 0.602650 5_2:+6992769 None:intergenic
ATTTAATCAACCGAGTTGAG+AGG 0.603531 5_2:-6991523 Msa0753330:CDS
TTGGTTACTGTGCTGATCGG+TGG 0.603838 5_2:-6993365 Msa0753330:CDS
GCCTTGGGAACATCTTCTGA+AGG 0.605195 5_2:-6992770 Msa0753330:CDS
GGTCTCCGGGCACATCTCCA+CGG 0.608605 5_2:+6991688 None:intergenic
AACCCCAGAAGGACCAGTCA+GGG 0.609191 5_2:+6993325 None:intergenic
CTGTGCTGATCGGTGGACAC+AGG 0.621325 5_2:-6993358 Msa0753330:CDS
CGGAAATTAACTAACCCAGA+GGG 0.622625 5_2:+6994179 None:intergenic
GATCAAATGGAGGAGGCAAG+GGG 0.622941 5_2:+6991582 None:intergenic
GATGTGGGATCAAATGGAGG+AGG 0.623679 5_2:+6991575 None:intergenic
TTTGAGCCAAGAGTTCCTGA+AGG 0.639566 5_2:-6991713 Msa0753330:CDS
AATCAACCGAGTTGAGAGGT+GGG 0.639972 5_2:-6991519 Msa0753330:CDS
GATAAGCCTGTTGTGCCCAT+GGG 0.642853 5_2:-6993408 Msa0753330:CDS
GAAACTCCGTTTATTTACGC+AGG 0.643555 5_2:-6992617 Msa0753330:intron
ACATACATACCAACCCCAGA+AGG 0.644873 5_2:+6993314 None:intergenic
GAGGGAAGAGATGAAAGCAG+CGG 0.652015 5_2:+6994197 None:intergenic
GAATGAATTCTGATGGAGTG+TGG 0.658307 5_2:+6994308 None:intergenic
TATTCAAGAAGAGCTCAACA+TGG 0.666732 5_2:-6991792 Msa0753330:CDS
GTGAAGAAATCGTAGTATCG+AGG 0.668956 5_2:+6992243 None:intergenic
AGTGATGTGGGATCAAATGG+AGG 0.680524 5_2:+6991572 None:intergenic
AGGCTTCACTAATAGTGTAG+GGG 0.685668 5_2:+6992263 None:intergenic
TTTATATTGAAGGATACGCG+TGG 0.686560 5_2:-6992320 Msa0753330:CDS
TTGCACAAGATCATATTCGG+TGG 0.699977 5_2:-6991660 Msa0753330:CDS
CAATTACTGAGAAAGTACCC+TGG 0.713086 5_2:-6993468 Msa0753330:CDS
GTATTTCAAATGGATTCACG+AGG 0.719253 5_2:-6993658 Msa0753330:CDS
ACGGAGTTTCCAATCCTGTG+CGG 0.723022 5_2:+6992630 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGTAATAATAATTCAAA+AGG - chr5_2:6991319-6991338 Msa0753330:three_prime_UTR 10.0%
!!! GACATATTTTATATATTTTA+TGG - chr5_2:6992785-6992804 Msa0753330:CDS 10.0%
!!! AAACAGTTTAATCTATTTTT+TGG - chr5_2:6991785-6991804 Msa0753330:CDS 15.0%
!!! AAGTCTTCTTTGTTTTATTA+AGG - chr5_2:6991269-6991288 Msa0753330:three_prime_UTR 20.0%
!!! AGTCTTCTTTGTTTTATTAA+GGG - chr5_2:6991270-6991289 Msa0753330:three_prime_UTR 20.0%
!! TAAGTAAATTACATTGTGTA+GGG + chr5_2:6991591-6991610 None:intergenic 20.0%
!! TTAAGTAAATTACATTGTGT+AGG + chr5_2:6991592-6991611 None:intergenic 20.0%
!! CACAATGTAATTTACTTAAT+CGG - chr5_2:6991593-6991612 Msa0753330:CDS 20.0%
!! ACAATGTAATTTACTTAATC+GGG - chr5_2:6991594-6991613 Msa0753330:CDS 20.0%
!!! TTTATTTTTTCATTCTTCGT+AGG + chr5_2:6991910-6991929 None:intergenic 20.0%
!! AGAATGAAAAAATAAAACAG+AGG - chr5_2:6991914-6991933 Msa0753330:intron 20.0%
!! AAAAACAACAAAAAACAACA+TGG - chr5_2:6992020-6992039 Msa0753330:intron 20.0%
!! TACATTAATCAACAACTATA+TGG + chr5_2:6992496-6992515 None:intergenic 20.0%
!!! ATATAGTTGTTGATTAATGT+AGG - chr5_2:6992495-6992514 Msa0753330:CDS 20.0%
!! TTATTCAATAACTAACTAAC+TGG + chr5_2:6992603-6992622 None:intergenic 20.0%
!! CTAAATTGAAGAGATAATAA+TGG + chr5_2:6992641-6992660 None:intergenic 20.0%
!! TAGTTTAAGTACTAATTTCA+TGG - chr5_2:6992858-6992877 Msa0753330:intron 20.0%
!!! AAATGCAATGTTTTTATTTC+AGG - chr5_2:6992901-6992920 Msa0753330:intron 20.0%
!!! AATGCAATGTTTTTATTTCA+GGG - chr5_2:6992902-6992921 Msa0753330:intron 20.0%
!!! ATATTTTGTCACAAATATGT+AGG - chr5_2:6993184-6993203 Msa0753330:intron 20.0%
!!! AAATGTACATGATGAATTTT+GGG + chr5_2:6993320-6993339 None:intergenic 20.0%
!!! TAAATGTACATGATGAATTT+TGG + chr5_2:6993321-6993340 None:intergenic 20.0%
!! AGATACAAAGTTTATATTGA+AGG - chr5_2:6993381-6993400 Msa0753330:CDS 20.0%
!!! TTTGTATTTCTATAACTCAA+AGG + chr5_2:6994340-6994359 None:intergenic 20.0%
! AATGAATGAGTGTAATTAAG+CGG + chr5_2:6991555-6991574 None:intergenic 25.0%
! CAATGTAATTTACTTAATCG+GGG - chr5_2:6991595-6991614 Msa0753330:CDS 25.0%
! TATACATCATTATTAGATGG+CGG - chr5_2:6991705-6991724 Msa0753330:CDS 25.0%
!!! TTTTTTTTTAACTCGATACC+TGG + chr5_2:6991762-6991781 None:intergenic 25.0%
! ATCCAAATAACATAAAAGTG+GGG + chr5_2:6992473-6992492 None:intergenic 25.0%
! GATCCAAATAACATAAAAGT+GGG + chr5_2:6992474-6992493 None:intergenic 25.0%
!! ATAATCACATTTTCTTGTCT+GGG + chr5_2:6992550-6992569 None:intergenic 25.0%
!! AATAATCACATTTTCTTGTC+TGG + chr5_2:6992551-6992570 None:intergenic 25.0%
!! TCTTCTGAAGGATATAAAAA+AGG - chr5_2:6992953-6992972 Msa0753330:intron 25.0%
!! CTTCTGAAGGATATAAAAAA+GGG - chr5_2:6992954-6992973 Msa0753330:intron 25.0%
!! TTCTGAAGGATATAAAAAAG+GGG - chr5_2:6992955-6992974 Msa0753330:intron 25.0%
!! ATATGTGATCTGAGATTAAA+TGG + chr5_2:6993280-6993299 None:intergenic 25.0%
! AAACTTTGTATCTGATATCA+AGG + chr5_2:6993374-6993393 None:intergenic 25.0%
!! TTTAAGACAAATGAATGACA+AGG + chr5_2:6993631-6993650 None:intergenic 25.0%
! AGTAGTAAAGATTTAAATCG+TGG - chr5_2:6993679-6993698 Msa0753330:CDS 25.0%
! TGGAATATTCATTTAGCAAA+TGG + chr5_2:6993967-6993986 None:intergenic 25.0%
! TAAAAAATCCTAAGTGATGT+GGG + chr5_2:6994154-6994173 None:intergenic 25.0%
! ATAAAAAATCCTAAGTGATG+TGG + chr5_2:6994155-6994174 None:intergenic 25.0%
TCTTCATGAATGAATTCTGA+TGG + chr5_2:6991413-6991432 None:intergenic 30.0%
GCCTATACATCATTATTAGA+TGG - chr5_2:6991702-6991721 Msa0753330:CDS 30.0%
GCCATCTAATAATGATGTAT+AGG + chr5_2:6991706-6991725 None:intergenic 30.0%
ATACATCATTATTAGATGGC+GGG - chr5_2:6991706-6991725 Msa0753330:CDS 30.0%
AATTACTGCTTGAACATGTT+TGG + chr5_2:6991981-6992000 None:intergenic 30.0%
!! GTTTTTAACGTTGTTGTTGT+CGG + chr5_2:6992006-6992025 None:intergenic 30.0%
AAAAAACAACATGGTATGTC+CGG - chr5_2:6992029-6992048 Msa0753330:intron 30.0%
! TGAATCCATTTGAAATACTC+CGG + chr5_2:6992051-6992070 None:intergenic 30.0%
CTAAAACCATGGAAGAAAAA+AGG - chr5_2:6992078-6992097 Msa0753330:intron 30.0%
!!! GTTATTCCTTTTTTCTTCCA+TGG + chr5_2:6992087-6992106 None:intergenic 30.0%
AAAAGGAATAACGAGAGAAA+TGG - chr5_2:6992095-6992114 Msa0753330:intron 30.0%
AAACAAGTAGAACTGTGTTT+AGG + chr5_2:6992424-6992443 None:intergenic 30.0%
GGATCCAAATAACATAAAAG+TGG + chr5_2:6992475-6992494 None:intergenic 30.0%
TCATTGTCATTCAAAGTTTG+TGG - chr5_2:6992518-6992537 Msa0753330:intron 30.0%
!! ATTGTTGCTTCTAAGATGTA+GGG + chr5_2:6992759-6992778 None:intergenic 30.0%
!! AATTGTTGCTTCTAAGATGT+AGG + chr5_2:6992760-6992779 None:intergenic 30.0%
TGAGATTAATATAAGGCCTT+GGG - chr5_2:6992926-6992945 Msa0753330:intron 30.0%
TTTCCTTTCCAATAAGCATA+AGG + chr5_2:6993011-6993030 None:intergenic 30.0%
TACAGTACAGACATATCTAA+AGG - chr5_2:6993117-6993136 Msa0753330:intron 30.0%
TTGTCACAAATATGTAGGAT+TGG - chr5_2:6993189-6993208 Msa0753330:intron 30.0%
GTGGTTATGATATTATATCG+CGG - chr5_2:6993698-6993717 Msa0753330:CDS 30.0%
!! ATCCTAGTCAAATGTTTTTG+AGG - chr5_2:6993724-6993743 Msa0753330:CDS 30.0%
GAAATTTATGAGTGAATCCA+TGG - chr5_2:6994078-6994097 Msa0753330:intron 30.0%
GATGAATGTGATGTGAGATT+GGG - chr5_2:6991341-6991360 Msa0753330:three_prime_UTR 35.0%
AACACATGAATTGTTAGCAG+AGG + chr5_2:6991676-6991695 None:intergenic 35.0%
TCTGCTAACAATTCATGTGT+TGG - chr5_2:6991675-6991694 Msa0753330:CDS 35.0%
CTGCTAACAATTCATGTGTT+GGG - chr5_2:6991676-6991695 Msa0753330:CDS 35.0%
!! ACAGTGTTTGTTGTTGTTGT+TGG + chr5_2:6991856-6991875 None:intergenic 35.0%
ATGGTACAATTCAGTACTGT+TGG + chr5_2:6991952-6991971 None:intergenic 35.0%
!! TGAACATGTTTGGTTCTTGA+TGG + chr5_2:6991971-6991990 None:intergenic 35.0%
! TATGTCCGGAGTATTTCAAA+TGG - chr5_2:6992043-6992062 Msa0753330:intron 35.0%
! GTATTTCAAATGGATTCACG+AGG - chr5_2:6992053-6992072 Msa0753330:intron 35.0%
!! TTTAGGTTGGTGGTGAAAAA+TGG - chr5_2:6992144-6992163 Msa0753330:CDS 35.0%
!! TTGGTGGTGAAAAATGGAAA+AGG - chr5_2:6992150-6992169 Msa0753330:CDS 35.0%
! TGGTGGTGAAAAATGGAAAA+GGG - chr5_2:6992151-6992170 Msa0753330:CDS 35.0%
!!! TTTTTGGTTACTGTGCTGAT+CGG - chr5_2:6992343-6992362 Msa0753330:intron 35.0%
GTCATTCAAAGTTTGTGGTT+AGG - chr5_2:6992523-6992542 Msa0753330:intron 35.0%
GATGTAGGGAACAAAATTGA+CGG + chr5_2:6992745-6992764 None:intergenic 35.0%
TCAGGGCTGAGATTAATATA+AGG - chr5_2:6992919-6992938 Msa0753330:intron 35.0%
CTGAGATTAATATAAGGCCT+TGG - chr5_2:6992925-6992944 Msa0753330:intron 35.0%
AGGGGAACAAAAGAGAAAAA+TGG - chr5_2:6992973-6992992 Msa0753330:intron 35.0%
ACAGAGAACCTTATGCTTAT+TGG - chr5_2:6993000-6993019 Msa0753330:intron 35.0%
GAACCTTATGCTTATTGGAA+AGG - chr5_2:6993005-6993024 Msa0753330:intron 35.0%
CGGTTGAAACATTACAATTG+AGG + chr5_2:6993064-6993083 None:intergenic 35.0%
ACTGTACCTGCGTAAATAAA+CGG + chr5_2:6993103-6993122 None:intergenic 35.0%
TGGATTAAAGAGTCTGAACA+AGG - chr5_2:6993209-6993228 Msa0753330:intron 35.0%
AGGATTCAATCACTCAAACT+TGG - chr5_2:6993229-6993248 Msa0753330:intron 35.0%
GGAACTACCTATATGTACAT+TGG + chr5_2:6993259-6993278 None:intergenic 35.0%
TTTATATTGAAGGATACGCG+TGG - chr5_2:6993391-6993410 Msa0753330:CDS 35.0%
AATAATGTTGCAATGGCTGT+AGG + chr5_2:6993500-6993519 None:intergenic 35.0%
TACAGCCATTGCAACATTAT+TGG - chr5_2:6993499-6993518 Msa0753330:CDS 35.0%
ATAGGCCAATAATGTTGCAA+TGG + chr5_2:6993507-6993526 None:intergenic 35.0%
! TGCAACATTATTGGCCTATA+AGG - chr5_2:6993508-6993527 Msa0753330:CDS 35.0%
! GCAACATTATTGGCCTATAA+GGG - chr5_2:6993509-6993528 Msa0753330:CDS 35.0%
CATCAAACATGCAGTTGATT+GGG - chr5_2:6993551-6993570 Msa0753330:CDS 35.0%
ATCAAACATGCAGTTGATTG+GGG - chr5_2:6993552-6993571 Msa0753330:CDS 35.0%
GAATATCGAAAGATATGCGA+TGG + chr5_2:6993609-6993628 None:intergenic 35.0%
TGCCTCAAAAACATTTGACT+AGG + chr5_2:6993729-6993748 None:intergenic 35.0%
CAACCTCAATTGTAATTGCA+AGG - chr5_2:6993747-6993766 Msa0753330:CDS 35.0%
! TTCTTGAATAAACTTGCTCC+CGG + chr5_2:6993909-6993928 None:intergenic 35.0%
TATTCAAGAAGAGCTCAACA+TGG - chr5_2:6993919-6993938 Msa0753330:intron 35.0%
TTATGAGTGAATCCATGGTT+AGG - chr5_2:6994083-6994102 Msa0753330:intron 35.0%
TATGAGTGAATCCATGGTTA+GGG - chr5_2:6994084-6994103 Msa0753330:intron 35.0%
! ATTTAATCAACCGAGTTGAG+AGG - chr5_2:6994188-6994207 Msa0753330:intron 35.0%
TAGCAATGCAAATAGTAAGC+TGG - chr5_2:6994279-6994298 Msa0753330:CDS 35.0%
GGATGAATGTGATGTGAGAT+TGG - chr5_2:6991340-6991359 Msa0753330:three_prime_UTR 40.0%
!!! AAGCTCTAGGTAGCTGTTTT+CGG + chr5_2:6991383-6991402 None:intergenic 40.0%
GAATGAATTCTGATGGAGTG+TGG + chr5_2:6991406-6991425 None:intergenic 40.0%
! GAGAAGAGAAGTGTAAAGAG+TGG + chr5_2:6991475-6991494 None:intergenic 40.0%
CGGAAATTAACTAACCCAGA+GGG + chr5_2:6991535-6991554 None:intergenic 40.0%
TTCCACAACTTATTCGATCC+TGG - chr5_2:6991733-6991752 Msa0753330:CDS 40.0%
! CATTTGCTGCTACTAAGGTT+TGG + chr5_2:6991885-6991904 None:intergenic 40.0%
! AGGAACATTTGCTGCTACTA+AGG + chr5_2:6991890-6991909 None:intergenic 40.0%
! TTCACGAGGATCTAAAACCA+TGG - chr5_2:6992067-6992086 Msa0753330:intron 40.0%
AGGAATAACGAGAGAAATGG+TGG - chr5_2:6992098-6992117 Msa0753330:intron 40.0%
GGTGGAGAAAGCAAAGAAAA+CGG - chr5_2:6992116-6992135 Msa0753330:intron 40.0%
! CAAAGAAAACGGCGCATTTT+AGG - chr5_2:6992127-6992146 Msa0753330:intron 40.0%
! ACGTGATGTTTTCACCGTTT+GGG - chr5_2:6992212-6992231 Msa0753330:CDS 40.0%
TAATTGCAGAATCCCCCAAA+CGG + chr5_2:6992229-6992248 None:intergenic 40.0%
!! CAATTACTGAGAAAGTACCC+TGG - chr5_2:6992243-6992262 Msa0753330:CDS 40.0%
!! CCAAGTCTGGAATTTTACCA+GGG + chr5_2:6992263-6992282 None:intergenic 40.0%
!! TCCAAGTCTGGAATTTTACC+AGG + chr5_2:6992264-6992283 None:intergenic 40.0%
TCAAACATGAGTTCCAAGTC+TGG + chr5_2:6992276-6992295 None:intergenic 40.0%
AGTAACCAAAAACAGGTGGT+GGG + chr5_2:6992335-6992354 None:intergenic 40.0%
TCAGCACAGTAACCAAAAAC+AGG + chr5_2:6992342-6992361 None:intergenic 40.0%
! AGGATATTGTTTTCCCTGAC+TGG - chr5_2:6992373-6992392 Msa0753330:intron 40.0%
TAATTCTCGTGAAGCATGCT+TGG - chr5_2:6992447-6992466 Msa0753330:intron 40.0%
!! GGCCCCACTTTTATGTTATT+TGG - chr5_2:6992468-6992487 Msa0753330:CDS 40.0%
! TACCTTTGTTATGTCGACGA+CGG - chr5_2:6992576-6992595 Msa0753330:intron 40.0%
TTGTAATGTTTCAACCGCAC+AGG - chr5_2:6993067-6993086 Msa0753330:intron 40.0%
GAAACTCCGTTTATTTACGC+AGG - chr5_2:6993094-6993113 Msa0753330:intron 40.0%
TGGCAGACCAATGTACATAT+AGG - chr5_2:6993249-6993268 Msa0753330:intron 40.0%
TAATAGTGTAGGGGAATCAC+AGG + chr5_2:6993442-6993461 None:intergenic 40.0%
AGGCTTCACTAATAGTGTAG+GGG + chr5_2:6993451-6993470 None:intergenic 40.0%
GAGGCTTCACTAATAGTGTA+GGG + chr5_2:6993452-6993471 None:intergenic 40.0%
GTGAAGAAATCGTAGTATCG+AGG + chr5_2:6993471-6993490 None:intergenic 40.0%
CATTTGTCAGTGTCCCTTAT+AGG + chr5_2:6993525-6993544 None:intergenic 40.0%
CCAATCAACTGCATGTTTGA+TGG + chr5_2:6993553-6993572 None:intergenic 40.0%
CCATCAAACATGCAGTTGAT+TGG - chr5_2:6993550-6993569 Msa0753330:CDS 40.0%
! CAAGAAGCATACACGGTATA+TGG + chr5_2:6993657-6993676 None:intergenic 40.0%
! CTACTGTCAAGAAGCATACA+CGG + chr5_2:6993664-6993683 None:intergenic 40.0%
CTGCCTTGCAATTACAATTG+AGG + chr5_2:6993753-6993772 None:intergenic 40.0%
CTCAATTGTAATTGCAAGGC+AGG - chr5_2:6993751-6993770 Msa0753330:CDS 40.0%
TGTACCACTACTAACTTGAC+AGG - chr5_2:6993865-6993884 Msa0753330:CDS 40.0%
TGTACCTGTCAAGTTAGTAG+TGG + chr5_2:6993872-6993891 None:intergenic 40.0%
ACTACTAACTTGACAGGTAC+AGG - chr5_2:6993871-6993890 Msa0753330:CDS 40.0%
ACTTGACAGGTACAGGAAAT+TGG - chr5_2:6993878-6993897 Msa0753330:CDS 40.0%
GTACAGGAAATTGGTAAAGC+CGG - chr5_2:6993887-6993906 Msa0753330:CDS 40.0%
TACAGGAAATTGGTAAAGCC+GGG - chr5_2:6993888-6993907 Msa0753330:CDS 40.0%
ATATGATCTTGTGCAAGCCA+TGG + chr5_2:6994047-6994066 None:intergenic 40.0%
GGCTTGCACAAGATCATATT+CGG - chr5_2:6994048-6994067 Msa0753330:intron 40.0%
TTGCACAAGATCATATTCGG+TGG - chr5_2:6994051-6994070 Msa0753330:intron 40.0%
CTAAGTGATGTGGGATCAAA+TGG + chr5_2:6994145-6994164 None:intergenic 40.0%
CATTTGATCCCACATCACTT+AGG - chr5_2:6994143-6994162 Msa0753330:intron 40.0%
AGAGGTGGGAAGATGAATAT+TGG - chr5_2:6994206-6994225 Msa0753330:CDS 40.0%
GTGCGTATGTATTTGCTCAT+TGG + chr5_2:6994240-6994259 None:intergenic 40.0%
!! AGCTGTTTTCGGTTAGGAGA+AGG + chr5_2:6991372-6991391 None:intergenic 45.0%
!! CTAGGTAGCTGTTTTCGGTT+AGG + chr5_2:6991378-6991397 None:intergenic 45.0%
! CAGGAGTCTTTCTGAGAAGA+AGG + chr5_2:6991452-6991471 None:intergenic 45.0%
! AGAGAAGTGTAAAGAGTGGC+AGG + chr5_2:6991471-6991490 None:intergenic 45.0%
TGCTTTCATCTCTTCCCTCT+GGG - chr5_2:6991518-6991537 Msa0753330:CDS 45.0%
GCGGAAATTAACTAACCCAG+AGG + chr5_2:6991536-6991555 None:intergenic 45.0%
CACCAGGATCGAATAAGTTG+TGG + chr5_2:6991738-6991757 None:intergenic 45.0%
CACAACTTATTCGATCCTGG+TGG - chr5_2:6991736-6991755 Msa0753330:CDS 45.0%
!! GAAAACGGCGCATTTTAGGT+TGG - chr5_2:6992131-6992150 Msa0753330:intron 45.0%
! CACGTGATGTTTTCACCGTT+TGG - chr5_2:6992211-6992230 Msa0753330:CDS 45.0%
! CGTGATGTTTTCACCGTTTG+GGG - chr5_2:6992213-6992232 Msa0753330:CDS 45.0%
! GTGATGTTTTCACCGTTTGG+GGG - chr5_2:6992214-6992233 Msa0753330:CDS 45.0%
CCCTGGTAAAATTCCAGACT+TGG - chr5_2:6992260-6992279 Msa0753330:CDS 45.0%
CAGTAACCAAAAACAGGTGG+TGG + chr5_2:6992336-6992355 None:intergenic 45.0%
GCACAGTAACCAAAAACAGG+TGG + chr5_2:6992339-6992358 None:intergenic 45.0%
ACATACATACCAACCCCAGA+AGG + chr5_2:6992400-6992419 None:intergenic 45.0%
TCCTTCAGAAGATGTTCCCA+AGG + chr5_2:6992945-6992964 None:intergenic 45.0%
AGTCGTGTTGCAGCAGTATA+AGG + chr5_2:6993035-6993054 None:intergenic 45.0%
ATGTTTCAACCGCACAGGAT+TGG - chr5_2:6993072-6993091 Msa0753330:intron 45.0%
CGAGGCTTCACTAATAGTGT+AGG + chr5_2:6993453-6993472 None:intergenic 45.0%
CCACAGGCTCACTAAATCTT+AGG + chr5_2:6993777-6993796 None:intergenic 45.0%
CCTAAGATTTAGTGAGCCTG+TGG - chr5_2:6993774-6993793 Msa0753330:CDS 45.0%
GATTTAGTGAGCCTGTGGTT+TGG - chr5_2:6993779-6993798 Msa0753330:CDS 45.0%
TTTGAGCCAAGAGTTCCTGA+AGG - chr5_2:6993998-6994017 Msa0753330:intron 45.0%
TGTAGAAGGTTCCCTAACCA+TGG + chr5_2:6994098-6994117 None:intergenic 45.0%
AGTGATGTGGGATCAAATGG+AGG + chr5_2:6994142-6994161 None:intergenic 45.0%
! TAATCAACCGAGTTGAGAGG+TGG - chr5_2:6994191-6994210 Msa0753330:intron 45.0%
! AATCAACCGAGTTGAGAGGT+GGG - chr5_2:6994192-6994211 Msa0753330:intron 45.0%
!! TAAACTATATAAATATAATA+AGG + chr5_2:6992814-6992833 None:intergenic 5.0%
TGATGGAGTGTGGAAGCTCT+AGG + chr5_2:6991396-6991415 None:intergenic 50.0%
AGATGAAAGCAGCGGTGATG+AGG + chr5_2:6991509-6991528 None:intergenic 50.0%
GAGGGAAGAGATGAAAGCAG+CGG + chr5_2:6991517-6991536 None:intergenic 50.0%
CTGCTTTCATCTCTTCCCTC+TGG - chr5_2:6991517-6991536 Msa0753330:CDS 50.0%
AGGTCTCAAGCCTTCACGAA+CGG + chr5_2:6991626-6991645 None:intergenic 50.0%
TTCGTGAAGGCTTGAGACCT+AGG - chr5_2:6991626-6991645 Msa0753330:CDS 50.0%
!! CCTAGAAAGGAGGTGTTCCT+AGG + chr5_2:6991646-6991665 None:intergenic 50.0%
CCTAGGAACACCTCCTTTCT+AGG - chr5_2:6991643-6991662 Msa0753330:CDS 50.0%
AGGCTTGAGACCTAGAAAGG+AGG + chr5_2:6991656-6991675 None:intergenic 50.0%
CAGAGGCTTGAGACCTAGAA+AGG + chr5_2:6991659-6991678 None:intergenic 50.0%
!!! AACGGCGCATTTTAGGTTGG+TGG - chr5_2:6992134-6992153 Msa0753330:intron 50.0%
TGATAAGCCTGTTGTGCCCA+TGG - chr5_2:6992302-6992321 Msa0753330:CDS 50.0%
GATAAGCCTGTTGTGCCCAT+GGG - chr5_2:6992303-6992322 Msa0753330:CDS 50.0%
! TTGGTTACTGTGCTGATCGG+TGG - chr5_2:6992346-6992365 Msa0753330:intron 50.0%
!! TTTTCCCTGACTGGTCCTTC+TGG - chr5_2:6992382-6992401 Msa0753330:intron 50.0%
! TTTCCCTGACTGGTCCTTCT+GGG - chr5_2:6992383-6992402 Msa0753330:intron 50.0%
GACCGTCGTCGACATAACAA+AGG + chr5_2:6992581-6992600 None:intergenic 50.0%
GCCTTGGGAACATCTTCTGA+AGG - chr5_2:6992941-6992960 Msa0753330:intron 50.0%
ACGGAGTTTCCAATCCTGTG+CGG + chr5_2:6993084-6993103 None:intergenic 50.0%
CATGATCAATGACGCGACCA+GGG + chr5_2:6993810-6993829 None:intergenic 50.0%
TGGCTCAAACTCGAGAAGCT+TGG + chr5_2:6993987-6994006 None:intergenic 50.0%
! GGGCAAGGGTCTTTTGTAGA+AGG + chr5_2:6994112-6994131 None:intergenic 50.0%
GATCAAATGGAGGAGGCAAG+GGG + chr5_2:6994132-6994151 None:intergenic 50.0%
GGATCAAATGGAGGAGGCAA+GGG + chr5_2:6994133-6994152 None:intergenic 50.0%
GATGTGGGATCAAATGGAGG+AGG + chr5_2:6994139-6994158 None:intergenic 50.0%
CATCTTCCCACCTCTCAACT+CGG + chr5_2:6994201-6994220 None:intergenic 50.0%
AAGCAGCGGTGATGAGGATG+AGG + chr5_2:6991503-6991522 None:intergenic 55.0%
GGTCTCAAGCCTTCACGAAC+GGG + chr5_2:6991625-6991644 None:intergenic 55.0%
CTTATTCGATCCTGGTGGCC+AGG - chr5_2:6991741-6991760 Msa0753330:CDS 55.0%
TAACTCGATACCTGGCCACC+AGG + chr5_2:6991754-6991773 None:intergenic 55.0%
! TTGGGCCCACCACCTGTTTT+TGG - chr5_2:6992327-6992346 Msa0753330:CDS 55.0%
! TTCCCTGACTGGTCCTTCTG+GGG - chr5_2:6992384-6992403 Msa0753330:intron 55.0%
AACCCCAGAAGGACCAGTCA+GGG + chr5_2:6992389-6992408 None:intergenic 55.0%
! AGTGAGCCTGTGGTTTGGAC+CGG - chr5_2:6993784-6993803 Msa0753330:CDS 55.0%
CCATGATCAATGACGCGACC+AGG + chr5_2:6993811-6993830 None:intergenic 55.0%
CCTGGTCGCGTCATTGATCA+TGG - chr5_2:6993808-6993827 Msa0753330:CDS 55.0%
ACGGCTCCTTCAGGAACTCT+TGG + chr5_2:6994007-6994026 None:intergenic 55.0%
AAGAGTTCCTGAAGGAGCCG+TGG - chr5_2:6994006-6994025 Msa0753330:intron 55.0%
TTGTGCAAGCCATGGTCTCC+GGG + chr5_2:6994039-6994058 None:intergenic 55.0%
CTTGTGCAAGCCATGGTCTC+CGG + chr5_2:6994040-6994059 None:intergenic 55.0%
GGGATCAAATGGAGGAGGCA+AGG + chr5_2:6994134-6994153 None:intergenic 55.0%
CCTGTTGTGCCCATGGGCTT+GGG - chr5_2:6992309-6992328 Msa0753330:CDS 60.0%
! CTGTGCTGATCGGTGGACAC+AGG - chr5_2:6992353-6992372 Msa0753330:intron 60.0%
CAACCCCAGAAGGACCAGTC+AGG + chr5_2:6992390-6992409 None:intergenic 60.0%
!! CTGACTGGTCCTTCTGGGGT+TGG - chr5_2:6992388-6992407 Msa0753330:intron 60.0%
ATCAATGACGCGACCAGGGC+CGG + chr5_2:6993806-6993825 None:intergenic 60.0%
CACATCTCCACGGCTCCTTC+AGG + chr5_2:6994016-6994035 None:intergenic 60.0%
ATGGAGGAGGCAAGGGGCAA+GGG + chr5_2:6994126-6994145 None:intergenic 60.0%
AATGGAGGAGGCAAGGGGCA+AGG + chr5_2:6994127-6994146 None:intergenic 60.0%
CGGGGTTGACCCGTTCGTGA+AGG - chr5_2:6991613-6991632 Msa0753330:CDS 65.0%
GCCTGTTGTGCCCATGGGCT+TGG - chr5_2:6992308-6992327 Msa0753330:CDS 65.0%
CCCAAGCCCATGGGCACAAC+AGG + chr5_2:6992312-6992331 None:intergenic 65.0%
AGGAGCCGTGGAGATGTGCC+CGG - chr5_2:6994018-6994037 Msa0753330:intron 65.0%
GGTCTCCGGGCACATCTCCA+CGG + chr5_2:6994026-6994045 None:intergenic 65.0%
GGAGATGTGCCCGGAGACCA+TGG - chr5_2:6994027-6994046 Msa0753330:intron 65.0%
!! GGTGGTGGGCCCAAGCCCAT+GGG + chr5_2:6992321-6992340 None:intergenic 70.0%
!! AGGTGGTGGGCCCAAGCCCA+TGG + chr5_2:6992322-6992341 None:intergenic 70.0%
CCAGGGCCGGTCCAAACCAC+AGG + chr5_2:6993793-6993812 None:intergenic 70.0%
! CCTGTGGTTTGGACCGGCCC+TGG - chr5_2:6993790-6993809 Msa0753330:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6991268 6994465 6991268 ID=Msa0753330;Name=Msa0753330
chr5_2 mRNA 6991268 6994465 6991268 ID=Msa0753330-mRNA-1;Parent=Msa0753330;Name=Msa0753330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=158|1|1|1|1|1|6|222|508
chr5_2 exon 6991268 6991846 6991268 ID=Msa0753330-mRNA-1:exon:3120;Parent=Msa0753330-mRNA-1
chr5_2 exon 6992140 6992350 6992140 ID=Msa0753330-mRNA-1:exon:3119;Parent=Msa0753330-mRNA-1
chr5_2 exon 6992463 6992527 6992463 ID=Msa0753330-mRNA-1:exon:3118;Parent=Msa0753330-mRNA-1
chr5_2 exon 6992618 6992810 6992618 ID=Msa0753330-mRNA-1:exon:3117;Parent=Msa0753330-mRNA-1
chr5_2 exon 6993324 6993910 6993324 ID=Msa0753330-mRNA-1:exon:3116;Parent=Msa0753330-mRNA-1
chr5_2 exon 6994194 6994465 6994194 ID=Msa0753330-mRNA-1:exon:3115;Parent=Msa0753330-mRNA-1
chr5_2 five_prime_UTR 6994308 6994465 6994308 ID=Msa0753330-mRNA-1:five_prime_utr;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6994194 6994307 6994194 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6993324 6993910 6993324 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6992618 6992810 6992618 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6992463 6992527 6992463 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6992140 6992350 6992140 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 CDS 6991490 6991846 6991490 ID=Msa0753330-mRNA-1:cds;Parent=Msa0753330-mRNA-1
chr5_2 three_prime_UTR 6991268 6991489 6991268 ID=Msa0753330-mRNA-1:three_prime_utr;Parent=Msa0753330-mRNA-1
Gene Sequence

>Msa0753330

ATGAAGAAATTCAAGAAACAACACCTTCTTCTCAGAAAGACTCCTGCCACTCTTTACACTTCTCTTCTCTTTCTCCTCATCCTCATCACCGCTGCTTTCATCTCTTCCCTCTGGTCTACGCTTTCTACAACAACTAATATCAAACCAACAACAACAACAAACACTGTTGCAAACCAAACCTTAGTAGCAGCAAATGTTCCTACGAAGAATGAAAAAATAAAACAGAGGAAAAAGTTTCAACCAACAGTACTGAATTGTACCATCAAGAACCAAACATGTTCAAGCAGTAATTATCCGACAACAACAACGTTAAAAACAACAAAAAACAACATGGTATGTCCGGAGTATTTCAAATGGATTCACGAGGATCTAAAACCATGGAAGAAAAAAGGAATAACGAGAGAAATGGTGGAGAAAGCAAAGAAAACGGCGCATTTTAGGTTGGTGGTGAAAAATGGAAAAGGGTATATAGAGAAATACAAGAACAAAGAAGCTATACAAACACGTGATGTTTTCACCGTTTGGGGGATTCTGCAATTACTGAGAAAGTACCCTGGTAAAATTCCAGACTTGGAACTCATGTTTGATTGTAATGATAAGCCTGTTGTGCCCATGGGCTTGGGCCCACCACCTGTTTTTGGTTACTGTGCTGATCGGTGGACACAGGATATTGTTTTCCCTGACTGGTCCTTCTGGGGTTGGGCTGAGATTAATATAAGGCCTTGGGAACATCTTCTGAAGGATATAAAAAAGGGGAACAAAAGAGAAAAATGGAAAGACAGAGAACCTTATGCTTATTGGAAAGGAAATCCTTATACTGCTGCAACACGACTAGACTTCCTCAATTGTAATGTTTCAACCGCACAGGATTGGAAACTCCGTTTATTTACGCAGGATTGGATTAAAGAGTCTGAACAAGGATTCAATCACTCAAACTTGGCAGACCAATGTACATATAGATACAAAGTTTATATTGAAGGATACGCGTGGTCTGTGAGTGAGAAATACATTCTAGCCTGTGATTCCCCTACACTATTAGTGAAGCCTCGATACTACGATTTCTTCACAAGAAGCCTACAGCCATTGCAACATTATTGGCCTATAAGGGACACTGACAAATGCAAATCCATCAAACATGCAGTTGATTGGGGCAATAATCATGAGCAAAAAGTACAGGAAATTGGTAAAGCCGGGAGCAAGTTTATTCAAGAAGAGCTCAACATGGATTACATTTATGACTATATGTTCCATTTGCTAAATGAATATTCCAAGCTTCTCGAGTTTGAGCCAAGAGTTCCTGAAGGAGCCGTGGAGATGTGCCCGGAGACCATGGCTTGCACAAGATCATATTCGGTGGAGAAGAAATTTATGAGTGAATCCATGGTTAGGGAACCTTCTACAAAAGACCCTTGCCCCTTGCCTCCTCCATTTGATCCCACATCACTTAGGATTTTTTATGCAACGAAACAAAATTTAATCAACCGAGTTGAGAGGTGGGAAGATGAATATTGGAAAAGTTACCAATGA

Protein sequence

>Msa0753330

MKKFKKQHLLLRKTPATLYTSLLFLLILITAAFISSLWSTLSTTTNIKPTTTTNTVANQTLVAANVPTKNEKIKQRKKFQPTVLNCTIKNQTCSSSNYPTTTTLKTTKNNMVCPEYFKWIHEDLKPWKKKGITREMVEKAKKTAHFRLVVKNGKGYIEKYKNKEAIQTRDVFTVWGILQLLRKYPGKIPDLELMFDCNDKPVVPMGLGPPPVFGYCADRWTQDIVFPDWSFWGWAEINIRPWEHLLKDIKKGNKREKWKDREPYAYWKGNPYTAATRLDFLNCNVSTAQDWKLRLFTQDWIKESEQGFNHSNLADQCTYRYKVYIEGYAWSVSEKYILACDSPTLLVKPRYYDFFTRSLQPLQHYWPIRDTDKCKSIKHAVDWGNNHEQKVQEIGKAGSKFIQEELNMDYIYDYMFHLLNEYSKLLEFEPRVPEGAVEMCPETMACTRSYSVEKKFMSESMVREPSTKDPCPLPPPFDPTSLRIFYATKQNLINRVERWEDEYWKSYQ*