AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0787410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0787410 MtrunA17_Chr5g0410771 98.408 377 6 0 1 377 1 377 0.0 759
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0787410 AT2G35500.1 65.318 346 114 2 26 371 42 381 6.81e-158 449

Find 100 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCTCTTCAGCCACTTTC+TGG 0.132886 5_2:+73141596 None:intergenic
GAACGCAGTGATACGAAATT+TGG 0.241396 5_2:+73142436 None:intergenic
TCAGCAACAGCTGGAGTTCT+TGG 0.290771 5_2:-73138799 Msa0787410:three_prime_UTR
CTGGAAGTTTCTTGTCTGAT+AGG 0.299443 5_2:+73139507 None:intergenic
GTTTCACCACCTTCACTTGA+TGG 0.305523 5_2:+73138882 None:intergenic
TCGTAAGTTGTGGTGGAAAC+AGG 0.339571 5_2:+73142340 None:intergenic
TGAAGAGCTTGCTACTGGTC+TGG 0.344091 5_2:-73141584 Msa0787410:CDS
GAAGAGCTTGCTACTGGTCT+GGG 0.347927 5_2:-73141583 Msa0787410:CDS
TTCTATCTCTATTGGTGAAA+TGG 0.350542 5_2:-73142548 Msa0787410:exon
GGCAGTGAAGGAACATTTGC+AGG 0.351085 5_2:+73142363 None:intergenic
TTAAACCCTCGGAAACAATA+TGG 0.358216 5_2:-73141869 Msa0787410:intron
AAGTCTGGCTTTAATAATAA+AGG 0.365088 5_2:-73142585 None:intergenic
CTATCAGACAAGAAACTTCC+AGG 0.381417 5_2:-73139506 Msa0787410:intron
CTGCTGGAAGATCTGATAAA+TGG 0.382309 5_2:-73140240 Msa0787410:CDS
ACATGAATCCACGGTTTGAT+TGG 0.384554 5_2:+73141343 None:intergenic
TCTCTATCTTCTATCTCTAT+TGG 0.384758 5_2:-73142556 Msa0787410:five_prime_UTR
AAGTACAGTGCCTTCGCCTT+CGG 0.393292 5_2:+73140413 None:intergenic
TCATGGGAATCGCTCGCTGC+TGG 0.401946 5_2:-73141679 Msa0787410:CDS
TTTATGCAGGATTTACTGTC+TGG 0.408090 5_2:-73140210 Msa0787410:CDS
AGGGCAGCAGTTGCAACATT+AGG 0.414670 5_2:-73140277 Msa0787410:CDS
CTACCACTCCCGCTGCTCTC+AGG 0.423425 5_2:-73142516 Msa0787410:CDS
ATGGAGTTAAGATTAAATAT+AGG 0.430953 5_2:-73142017 Msa0787410:CDS
AAAACGATCCTGAGTTGAAA+TGG 0.440141 5_2:-73141717 Msa0787410:CDS
TTTCTGGTTGTGGGGTTTGG+AGG 0.444031 5_2:+73142487 None:intergenic
GGAGGTAAACATGGTGCTGC+TGG 0.447752 5_2:-73140256 Msa0787410:CDS
AGTGCTCTGCTAGTCATGTA+AGG 0.451996 5_2:-73140297 Msa0787410:intron
GGAATCACCAACAAGATAGA+TGG 0.454311 5_2:+73141630 None:intergenic
GACATCCCAATCTTATGTAT+AGG 0.456670 5_2:+73138943 None:intergenic
GGCCTGACATCATGGAATCA+TGG 0.458410 5_2:-73141696 Msa0787410:CDS
AGATGTGGTTGTGAAATTAC+AGG 0.459192 5_2:-73139594 Msa0787410:CDS
CATAAAACTTAGCATACAAA+GGG 0.461286 5_2:+73138601 None:intergenic
GGAAGAAACCTGAGAGCAGC+GGG 0.467446 5_2:+73142508 None:intergenic
ATTAGTGTCTATCAACGTAA+TGG 0.470764 5_2:+73141908 None:intergenic
TTAGTGTCTATCAACGTAAT+GGG 0.472184 5_2:+73141909 None:intergenic
TCCCATGATTCCATGATGTC+AGG 0.474648 5_2:+73141694 None:intergenic
ACGATCAGAGTGTTGCAGTC+AGG 0.476415 5_2:-73141936 Msa0787410:CDS
AAAAGCCTATACATAAGATT+GGG 0.479493 5_2:-73138948 Msa0787410:CDS
TGAGATTGAGAAAATAATGA+AGG 0.481196 5_2:+73142403 None:intergenic
AAACCTGAGAGCAGCGGGAG+TGG 0.486717 5_2:+73142513 None:intergenic
GATTGGGATGTCGTGGTGAT+TGG 0.488854 5_2:-73138932 Msa0787410:CDS
CACTTTCTGGTTGATTTCAG+TGG 0.492804 5_2:+73141609 None:intergenic
AAATGGCGACATCTTTATGC+AGG 0.496184 5_2:-73140223 Msa0787410:CDS
TTATGCTAAAAGTGTGGCAC+AGG 0.496935 5_2:-73139558 Msa0787410:CDS
CTGAGAGCAGCGGGAGTGGT+AGG 0.497814 5_2:+73142517 None:intergenic
GGAACATCCATCTATCTTGT+TGG 0.499276 5_2:-73141637 Msa0787410:CDS
TCACTTGATGGATCCCAACC+AGG 0.504453 5_2:+73138894 None:intergenic
TTCTGATAATGCTTCAGAGA+TGG 0.507023 5_2:-73142036 Msa0787410:CDS
AAGAAGCACAAAAGACATAT+CGG 0.507065 5_2:-73141982 Msa0787410:CDS
ATTCCAGGGCTGCTTGCTGA+AGG 0.508946 5_2:-73140450 Msa0787410:intron
GAACATTTGCAGGGAGAAAG+AGG 0.509068 5_2:+73142373 None:intergenic
GCCTGACATCATGGAATCAT+GGG 0.510245 5_2:-73141695 Msa0787410:CDS
TGTTTAATATGTGTGACCAT+TGG 0.510824 5_2:-73138545 Msa0787410:three_prime_UTR
GTGGCTGAAGAGCTTGCTAC+TGG 0.517891 5_2:-73141589 Msa0787410:CDS
TTGTCACAGACTGAAGCATC+AGG 0.519376 5_2:-73140187 Msa0787410:intron
CGTAAGTTGTGGTGGAAACA+GGG 0.526645 5_2:+73142341 None:intergenic
CACTGAAATCAACCAGAAAG+TGG 0.526884 5_2:-73141608 Msa0787410:CDS
AGGAAGAAACCTGAGAGCAG+CGG 0.533503 5_2:+73142507 None:intergenic
CACAAACCATATTGTTTCCG+AGG 0.538620 5_2:+73141863 None:intergenic
CTCAAGATCGTCACATCCAA+TGG 0.545447 5_2:+73138529 None:intergenic
GTTGAAATGGCCTGACATCA+TGG 0.556044 5_2:-73141704 Msa0787410:CDS
AGTGAAGGTGGTGAAACTCT+TGG 0.556988 5_2:-73138876 Msa0787410:CDS
AAGATTAAATATAGGAAACA+TGG 0.562321 5_2:-73142009 Msa0787410:CDS
GGTGGAAACAGGGGCAGTGA+AGG 0.571453 5_2:+73142351 None:intergenic
GCAGCAGTTGCAACATTAGG+AGG 0.571731 5_2:-73140274 Msa0787410:CDS
TCATAAAACTTAGCATACAA+AGG 0.573858 5_2:+73138600 None:intergenic
ATGTCAGGCCATTTCAACTC+AGG 0.577136 5_2:+73141709 None:intergenic
CACTTGATGGATCCCAACCA+GGG 0.588545 5_2:+73138895 None:intergenic
TACATAAGATTGGGATGTCG+TGG 0.592456 5_2:-73138939 Msa0787410:CDS
CTGTACTTGAAAGCATAAGT+AGG 0.593080 5_2:-73140398 Msa0787410:intron
AGCAAGTACCTCGTAAGTTG+TGG 0.593224 5_2:+73142330 None:intergenic
AGATGAAGATTCAGCAAGGG+AGG 0.603993 5_2:-73139663 Msa0787410:CDS
AAGAGCTTGCTACTGGTCTG+GGG 0.608924 5_2:-73141582 Msa0787410:intron
GACTCAGTAGCCGAAGGCGA+AGG 0.609903 5_2:-73140423 Msa0787410:CDS
GGTTGTGAAATTACAGGGAT+GGG 0.612080 5_2:-73139588 Msa0787410:CDS
ACAAACCATATTGTTTCCGA+GGG 0.614295 5_2:+73141864 None:intergenic
TGTTTCCACCACAACTTACG+AGG 0.616074 5_2:-73142338 Msa0787410:intron
AAACTTAGCATACAAAGGGG+TGG 0.617388 5_2:+73138605 None:intergenic
AACTTATTCCAATCAAACCG+TGG 0.626048 5_2:-73141351 Msa0787410:CDS
GTGCTCTGCTAGTCATGTAA+GGG 0.626183 5_2:-73140296 Msa0787410:intron
AACATTTGCAGGGAGAAAGA+GGG 0.627712 5_2:+73142374 None:intergenic
TACAGATGAAGATTCAGCAA+GGG 0.627827 5_2:-73139666 Msa0787410:intron
ATGACACTTACATGAATCCA+CGG 0.632412 5_2:+73141334 None:intergenic
AAGTACCTCGTAAGTTGTGG+TGG 0.640213 5_2:+73142333 None:intergenic
GGTTGGGATCCATCAAGTGA+AGG 0.641352 5_2:-73138891 Msa0787410:CDS
TGGTTGTGAAATTACAGGGA+TGG 0.647286 5_2:-73139589 Msa0787410:CDS
GGTTCTGACTCAGTAGCCGA+AGG 0.651113 5_2:-73140429 Msa0787410:CDS
TCCTGCTTATGCTAAAAGTG+TGG 0.654346 5_2:-73139564 Msa0787410:CDS
TGCATATACGAATGCAGATG+TGG 0.657277 5_2:-73139609 Msa0787410:CDS
GCAGTGAAGGAACATTTGCA+GGG 0.659693 5_2:+73142364 None:intergenic
TATAGATGATGATCATCTTG+TGG 0.662960 5_2:-73141752 Msa0787410:CDS
ATACAGATGAAGATTCAGCA+AGG 0.667293 5_2:-73139667 Msa0787410:intron
CTTGATGGATCCCAACCAGG+GGG 0.667634 5_2:+73138897 None:intergenic
ACTTGATGGATCCCAACCAG+GGG 0.672298 5_2:+73138896 None:intergenic
GTAAGTTGTGGTGGAAACAG+GGG 0.682098 5_2:+73142342 None:intergenic
GCAACATTAGGAGGTAAACA+TGG 0.688881 5_2:-73140265 Msa0787410:CDS
CTAATCACAAATGATCAACA+TGG 0.691459 5_2:-73138679 Msa0787410:three_prime_UTR
TGGGATCCATCAAGTGAAGG+TGG 0.694285 5_2:-73138888 Msa0787410:CDS
GATGTGGTTGTGAAATTACA+GGG 0.701042 5_2:-73139593 Msa0787410:CDS
TATGCTAAAAGTGTGGCACA+GGG 0.729528 5_2:-73139557 Msa0787410:CDS
ATAAAACTTAGCATACAAAG+GGG 0.743011 5_2:+73138602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATAGAAAAAGAAAT+TGG + chr5_2:73138945-73138964 None:intergenic 10.0%
!!! ATTTTAAACTATGTTAAAAA+TGG - chr5_2:73139243-73139262 Msa0787410:intron 10.0%
!!! ATTTTAGTTGATATATTATT+TGG - chr5_2:73140919-73140938 Msa0787410:intron 10.0%
!! AAATATATAGAAAAAGAAAT+TGG + chr5_2:73138945-73138964 None:intergenic 10.0%
!!! ATTTTAAACTATGTTAAAAA+TGG - chr5_2:73139243-73139262 Msa0787410:intron 10.0%
!!! ATTTTAGTTGATATATTATT+TGG - chr5_2:73140919-73140938 Msa0787410:intron 10.0%
!! TCTAATTATGAATATTCATA+AGG - chr5_2:73139549-73139568 Msa0787410:CDS 15.0%
!! TAATATTACAATAAAACTCT+AGG - chr5_2:73139906-73139925 Msa0787410:intron 15.0%
!! GCAAATATATATCAAAATAT+TGG + chr5_2:73140331-73140350 None:intergenic 15.0%
!! TCGATTATAAAAATAACTTA+TGG + chr5_2:73141823-73141842 None:intergenic 15.0%
!!! TGAATTTTTTTGTTTTATAG+GGG + chr5_2:73142317-73142336 None:intergenic 15.0%
!!! CTGAATTTTTTTGTTTTATA+GGG + chr5_2:73142318-73142337 None:intergenic 15.0%
!!! TCTGAATTTTTTTGTTTTAT+AGG + chr5_2:73142319-73142338 None:intergenic 15.0%
!! TCTAATTATGAATATTCATA+AGG - chr5_2:73139549-73139568 Msa0787410:CDS 15.0%
!! TAATATTACAATAAAACTCT+AGG - chr5_2:73139906-73139925 Msa0787410:intron 15.0%
!! GCAAATATATATCAAAATAT+TGG + chr5_2:73140331-73140350 None:intergenic 15.0%
!! TCGATTATAAAAATAACTTA+TGG + chr5_2:73141823-73141842 None:intergenic 15.0%
!!! TGAATTTTTTTGTTTTATAG+GGG + chr5_2:73142317-73142336 None:intergenic 15.0%
!!! CTGAATTTTTTTGTTTTATA+GGG + chr5_2:73142318-73142337 None:intergenic 15.0%
!!! TCTGAATTTTTTTGTTTTAT+AGG + chr5_2:73142319-73142338 None:intergenic 15.0%
!!! ATTGAGAAATCAAACATTTT+TGG - chr5_2:73138808-73138827 Msa0787410:three_prime_UTR 20.0%
!!! CTTTTTGTAATTTGATCTTT+TGG - chr5_2:73138967-73138986 Msa0787410:intron 20.0%
!! ATGGAGTTAAGATTAAATAT+AGG - chr5_2:73139064-73139083 Msa0787410:intron 20.0%
!! AAGATTAAATATAGGAAACA+TGG - chr5_2:73139072-73139091 Msa0787410:intron 20.0%
!! ACATCTGAAAAAAAAAAACA+AGG + chr5_2:73139780-73139799 None:intergenic 20.0%
!!! TTTTTTTTTTTCAGATGTCT+TGG - chr5_2:73139782-73139801 Msa0787410:intron 20.0%
!!! TTTTTTTTTTCAGATGTCTT+GGG - chr5_2:73139783-73139802 Msa0787410:intron 20.0%
!! AAATGATTCAAGAAAAATGA+TGG + chr5_2:73140221-73140240 None:intergenic 20.0%
!!! AATTTCTTCATTTCATTTTC+TGG - chr5_2:73140712-73140731 Msa0787410:intron 20.0%
!!! TTTTGAAAAATTTCCAACAA+AGG + chr5_2:73141121-73141140 None:intergenic 20.0%
!!! TTGTTGGAAATTTTTCAAAA+CGG - chr5_2:73141121-73141140 Msa0787410:intron 20.0%
!!! TTTAGTTTATGACATTCATT+AGG + chr5_2:73141919-73141938 None:intergenic 20.0%
!! CAACAAAAAAAATCATGTTA+CGG + chr5_2:73142431-73142450 None:intergenic 20.0%
!!! GCTAAGTTTTATGAATTAAT+CGG - chr5_2:73142490-73142509 Msa0787410:CDS 20.0%
!!! ATTGAGAAATCAAACATTTT+TGG - chr5_2:73138808-73138827 Msa0787410:three_prime_UTR 20.0%
!!! CTTTTTGTAATTTGATCTTT+TGG - chr5_2:73138967-73138986 Msa0787410:intron 20.0%
!! ATGGAGTTAAGATTAAATAT+AGG - chr5_2:73139064-73139083 Msa0787410:intron 20.0%
!! AAGATTAAATATAGGAAACA+TGG - chr5_2:73139072-73139091 Msa0787410:intron 20.0%
!! ACATCTGAAAAAAAAAAACA+AGG + chr5_2:73139780-73139799 None:intergenic 20.0%
!!! TTTTTTTTTTTCAGATGTCT+TGG - chr5_2:73139782-73139801 Msa0787410:intron 20.0%
!!! TTTTTTTTTTCAGATGTCTT+GGG - chr5_2:73139783-73139802 Msa0787410:intron 20.0%
!! AAATGATTCAAGAAAAATGA+TGG + chr5_2:73140221-73140240 None:intergenic 20.0%
!!! AATTTCTTCATTTCATTTTC+TGG - chr5_2:73140712-73140731 Msa0787410:intron 20.0%
!!! TTTTGAAAAATTTCCAACAA+AGG + chr5_2:73141121-73141140 None:intergenic 20.0%
!!! TTGTTGGAAATTTTTCAAAA+CGG - chr5_2:73141121-73141140 Msa0787410:intron 20.0%
!!! TTTAGTTTATGACATTCATT+AGG + chr5_2:73141919-73141938 None:intergenic 20.0%
!! CAACAAAAAAAATCATGTTA+CGG + chr5_2:73142431-73142450 None:intergenic 20.0%
!!! GCTAAGTTTTATGAATTAAT+CGG - chr5_2:73142490-73142509 Msa0787410:CDS 20.0%
! TGAGATTGAGAAAATAATGA+AGG + chr5_2:73138681-73138700 None:intergenic 25.0%
! ATTTGTACATTACAAACAGT+AGG + chr5_2:73138790-73138809 None:intergenic 25.0%
!! TGAGTTTGATTTATAACTGA+TGG - chr5_2:73138994-73139013 Msa0787410:intron 25.0%
!! ATCAGTTTGACTCTAATTTT+AGG - chr5_2:73139979-73139998 Msa0787410:intron 25.0%
!!! TTGACTCTAATTTTAGGTAA+AGG - chr5_2:73139985-73140004 Msa0787410:intron 25.0%
! GATTATCCATATGCTAAAAT+AGG + chr5_2:73140051-73140070 None:intergenic 25.0%
! CAAAGATATGTTACAAATTG+AGG - chr5_2:73140141-73140160 Msa0787410:intron 25.0%
! TTTGATATATATTTGCGAGT+TGG - chr5_2:73140335-73140354 Msa0787410:intron 25.0%
!! ATTAATATCCCTGACATTTT+TGG + chr5_2:73140378-73140397 None:intergenic 25.0%
! ATATAGGATTTAAGTGACTA+AGG + chr5_2:73140583-73140602 None:intergenic 25.0%
! GTTAATACACTGCAATATAT+AGG + chr5_2:73140599-73140618 None:intergenic 25.0%
! AACAAATGTAATCATATTCC+AGG - chr5_2:73140616-73140635 Msa0787410:intron 25.0%
! ACAAATGTAATCATATTCCA+GGG - chr5_2:73140617-73140636 Msa0787410:intron 25.0%
!!! TATTATTTGGCTGTTTTTAC+AGG - chr5_2:73140932-73140951 Msa0787410:intron 25.0%
! ATAAAATTTCTTCGAGTCAA+GGG + chr5_2:73141029-73141048 None:intergenic 25.0%
! TGAATGTCATAAACTAAAAC+TGG - chr5_2:73141921-73141940 Msa0787410:CDS 25.0%
! TCTAAATGTACCTTCTATAT+AGG - chr5_2:73142007-73142026 Msa0787410:CDS 25.0%
! AAAAAGCCTATACATAAGAT+TGG - chr5_2:73142132-73142151 Msa0787410:intron 25.0%
! AAAAGCCTATACATAAGATT+GGG - chr5_2:73142133-73142152 Msa0787410:intron 25.0%
!!! CGTAACATGATTTTTTTTGT+TGG - chr5_2:73142429-73142448 Msa0787410:CDS 25.0%
!!! ACATGATTTTTTTTGTTGGA+TGG - chr5_2:73142433-73142452 Msa0787410:CDS 25.0%
! ATAAAACTTAGCATACAAAG+GGG + chr5_2:73142482-73142501 None:intergenic 25.0%
! CATAAAACTTAGCATACAAA+GGG + chr5_2:73142483-73142502 None:intergenic 25.0%
! TCATAAAACTTAGCATACAA+AGG + chr5_2:73142484-73142503 None:intergenic 25.0%
! TGAGATTGAGAAAATAATGA+AGG + chr5_2:73138681-73138700 None:intergenic 25.0%
! ATTTGTACATTACAAACAGT+AGG + chr5_2:73138790-73138809 None:intergenic 25.0%
!! TGAGTTTGATTTATAACTGA+TGG - chr5_2:73138994-73139013 Msa0787410:intron 25.0%
!! ATCAGTTTGACTCTAATTTT+AGG - chr5_2:73139979-73139998 Msa0787410:intron 25.0%
!!! TTGACTCTAATTTTAGGTAA+AGG - chr5_2:73139985-73140004 Msa0787410:intron 25.0%
! GATTATCCATATGCTAAAAT+AGG + chr5_2:73140051-73140070 None:intergenic 25.0%
! CAAAGATATGTTACAAATTG+AGG - chr5_2:73140141-73140160 Msa0787410:intron 25.0%
! TTTGATATATATTTGCGAGT+TGG - chr5_2:73140335-73140354 Msa0787410:intron 25.0%
!! ATTAATATCCCTGACATTTT+TGG + chr5_2:73140378-73140397 None:intergenic 25.0%
! ATATAGGATTTAAGTGACTA+AGG + chr5_2:73140583-73140602 None:intergenic 25.0%
! GTTAATACACTGCAATATAT+AGG + chr5_2:73140599-73140618 None:intergenic 25.0%
! AACAAATGTAATCATATTCC+AGG - chr5_2:73140616-73140635 Msa0787410:intron 25.0%
! ACAAATGTAATCATATTCCA+GGG - chr5_2:73140617-73140636 Msa0787410:intron 25.0%
!!! TATTATTTGGCTGTTTTTAC+AGG - chr5_2:73140932-73140951 Msa0787410:intron 25.0%
! ATAAAATTTCTTCGAGTCAA+GGG + chr5_2:73141029-73141048 None:intergenic 25.0%
! TGAATGTCATAAACTAAAAC+TGG - chr5_2:73141921-73141940 Msa0787410:CDS 25.0%
! TCTAAATGTACCTTCTATAT+AGG - chr5_2:73142007-73142026 Msa0787410:CDS 25.0%
! AAAAAGCCTATACATAAGAT+TGG - chr5_2:73142132-73142151 Msa0787410:intron 25.0%
! AAAAGCCTATACATAAGATT+GGG - chr5_2:73142133-73142152 Msa0787410:intron 25.0%
!!! CGTAACATGATTTTTTTTGT+TGG - chr5_2:73142429-73142448 Msa0787410:CDS 25.0%
!!! ACATGATTTTTTTTGTTGGA+TGG - chr5_2:73142433-73142452 Msa0787410:CDS 25.0%
! ATAAAACTTAGCATACAAAG+GGG + chr5_2:73142482-73142501 None:intergenic 25.0%
! CATAAAACTTAGCATACAAA+GGG + chr5_2:73142483-73142502 None:intergenic 25.0%
! TCATAAAACTTAGCATACAA+AGG + chr5_2:73142484-73142503 None:intergenic 25.0%
TCTCTATCTTCTATCTCTAT+TGG - chr5_2:73138525-73138544 Msa0787410:three_prime_UTR 30.0%
TTCTATCTCTATTGGTGAAA+TGG - chr5_2:73138533-73138552 Msa0787410:three_prime_UTR 30.0%
!!! TTGAATGTTTTTCTGGTTGT+GGG + chr5_2:73138606-73138625 None:intergenic 30.0%
! GAAGAAGTTGAATGTTTTTC+TGG + chr5_2:73138613-73138632 None:intergenic 30.0%
! AAGAAGCACAAAAGACATAT+CGG - chr5_2:73139099-73139118 Msa0787410:intron 30.0%
TTAGTGTCTATCAACGTAAT+GGG + chr5_2:73139175-73139194 None:intergenic 30.0%
ATTAGTGTCTATCAACGTAA+TGG + chr5_2:73139176-73139195 None:intergenic 30.0%
TATAGATGATGATCATCTTG+TGG - chr5_2:73139329-73139348 Msa0787410:intron 30.0%
TTTAATGTTCATCTCTTCTC+AGG - chr5_2:73139675-73139694 Msa0787410:intron 30.0%
TATGCTAAAATAGGCAGAAT+TGG + chr5_2:73140042-73140061 None:intergenic 30.0%
!!! ATTCTGCCTATTTTAGCATA+TGG - chr5_2:73140042-73140061 Msa0787410:intron 30.0%
!! TTTTTGGCAAAGTTCACTTA+AGG + chr5_2:73140362-73140381 None:intergenic 30.0%
!! AATAGCTCTAAGATAAACCT+CGG + chr5_2:73140431-73140450 None:intergenic 30.0%
! TGCTAATATCTTTCGAGTAA+GGG + chr5_2:73140498-73140517 None:intergenic 30.0%
! ATGCTAATATCTTTCGAGTA+AGG + chr5_2:73140499-73140518 None:intergenic 30.0%
TTACTCGAAAGATATTAGCA+TGG - chr5_2:73140498-73140517 Msa0787410:intron 30.0%
GCATCTTGTATTAGTATAAG+AGG - chr5_2:73140525-73140544 Msa0787410:intron 30.0%
TGTATTAGTATAAGAGGACA+TGG - chr5_2:73140531-73140550 Msa0787410:intron 30.0%
!! TGTTTTCAAGGTTCAAAACA+AGG + chr5_2:73140989-73141008 None:intergenic 30.0%
GATAAAATTTCTTCGAGTCA+AGG + chr5_2:73141030-73141049 None:intergenic 30.0%
TCATTACAAAGATTGTGTGT+TGG - chr5_2:73141048-73141067 Msa0787410:intron 30.0%
! AACAAAGGTTGATTCAATCA+TGG + chr5_2:73141106-73141125 None:intergenic 30.0%
ATGATTGAATCAACCTTTGT+TGG - chr5_2:73141105-73141124 Msa0787410:intron 30.0%
!! GAAATTTTTCAAAACGGTGT+GGG - chr5_2:73141127-73141146 Msa0787410:intron 30.0%
AGAAGTGAGAAAACTAAACA+AGG - chr5_2:73141163-73141182 Msa0787410:intron 30.0%
GAAGTGAGAAAACTAAACAA+GGG - chr5_2:73141164-73141183 Msa0787410:intron 30.0%
AAGTGAGAAAACTAAACAAG+GGG - chr5_2:73141165-73141184 Msa0787410:intron 30.0%
!! CAGAAGTTTGATGTTTTAAG+GGG + chr5_2:73141697-73141716 None:intergenic 30.0%
!! CCAGAAGTTTGATGTTTTAA+GGG + chr5_2:73141698-73141717 None:intergenic 30.0%
! CATTTCGTTAAGAGTATGTT+TGG - chr5_2:73141743-73141762 Msa0787410:CDS 30.0%
TGACATTCATTAGGTTTCAT+AGG + chr5_2:73141910-73141929 None:intergenic 30.0%
! GCTCAAGATTTTATGTCATA+AGG - chr5_2:73141955-73141974 Msa0787410:CDS 30.0%
! CCATTTTCATCCTATATAGA+AGG + chr5_2:73142020-73142039 None:intergenic 30.0%
CCTTCTATATAGGATGAAAA+TGG - chr5_2:73142017-73142036 Msa0787410:CDS 30.0%
GAAAATGGAGACTGATAATA+AGG - chr5_2:73142032-73142051 Msa0787410:CDS 30.0%
!!! AAATTTTTTTCAGCAACAGC+TGG - chr5_2:73142273-73142292 Msa0787410:intron 30.0%
CTAATCACAAATGATCAACA+TGG - chr5_2:73142402-73142421 Msa0787410:CDS 30.0%
TGTTTAATATGTGTGACCAT+TGG - chr5_2:73142536-73142555 Msa0787410:exon 30.0%
TCTCTATCTTCTATCTCTAT+TGG - chr5_2:73138525-73138544 Msa0787410:three_prime_UTR 30.0%
TTCTATCTCTATTGGTGAAA+TGG - chr5_2:73138533-73138552 Msa0787410:three_prime_UTR 30.0%
!!! TTGAATGTTTTTCTGGTTGT+GGG + chr5_2:73138606-73138625 None:intergenic 30.0%
! GAAGAAGTTGAATGTTTTTC+TGG + chr5_2:73138613-73138632 None:intergenic 30.0%
! AAGAAGCACAAAAGACATAT+CGG - chr5_2:73139099-73139118 Msa0787410:intron 30.0%
TTAGTGTCTATCAACGTAAT+GGG + chr5_2:73139175-73139194 None:intergenic 30.0%
ATTAGTGTCTATCAACGTAA+TGG + chr5_2:73139176-73139195 None:intergenic 30.0%
TATAGATGATGATCATCTTG+TGG - chr5_2:73139329-73139348 Msa0787410:intron 30.0%
TTTAATGTTCATCTCTTCTC+AGG - chr5_2:73139675-73139694 Msa0787410:intron 30.0%
TATGCTAAAATAGGCAGAAT+TGG + chr5_2:73140042-73140061 None:intergenic 30.0%
!!! ATTCTGCCTATTTTAGCATA+TGG - chr5_2:73140042-73140061 Msa0787410:intron 30.0%
!! TTTTTGGCAAAGTTCACTTA+AGG + chr5_2:73140362-73140381 None:intergenic 30.0%
!! AATAGCTCTAAGATAAACCT+CGG + chr5_2:73140431-73140450 None:intergenic 30.0%
! TGCTAATATCTTTCGAGTAA+GGG + chr5_2:73140498-73140517 None:intergenic 30.0%
! ATGCTAATATCTTTCGAGTA+AGG + chr5_2:73140499-73140518 None:intergenic 30.0%
TTACTCGAAAGATATTAGCA+TGG - chr5_2:73140498-73140517 Msa0787410:intron 30.0%
GCATCTTGTATTAGTATAAG+AGG - chr5_2:73140525-73140544 Msa0787410:intron 30.0%
TGTATTAGTATAAGAGGACA+TGG - chr5_2:73140531-73140550 Msa0787410:intron 30.0%
!! TGTTTTCAAGGTTCAAAACA+AGG + chr5_2:73140989-73141008 None:intergenic 30.0%
GATAAAATTTCTTCGAGTCA+AGG + chr5_2:73141030-73141049 None:intergenic 30.0%
TCATTACAAAGATTGTGTGT+TGG - chr5_2:73141048-73141067 Msa0787410:intron 30.0%
! AACAAAGGTTGATTCAATCA+TGG + chr5_2:73141106-73141125 None:intergenic 30.0%
ATGATTGAATCAACCTTTGT+TGG - chr5_2:73141105-73141124 Msa0787410:intron 30.0%
!! GAAATTTTTCAAAACGGTGT+GGG - chr5_2:73141127-73141146 Msa0787410:intron 30.0%
AGAAGTGAGAAAACTAAACA+AGG - chr5_2:73141163-73141182 Msa0787410:intron 30.0%
GAAGTGAGAAAACTAAACAA+GGG - chr5_2:73141164-73141183 Msa0787410:intron 30.0%
AAGTGAGAAAACTAAACAAG+GGG - chr5_2:73141165-73141184 Msa0787410:intron 30.0%
!! CAGAAGTTTGATGTTTTAAG+GGG + chr5_2:73141697-73141716 None:intergenic 30.0%
!! CCAGAAGTTTGATGTTTTAA+GGG + chr5_2:73141698-73141717 None:intergenic 30.0%
! CATTTCGTTAAGAGTATGTT+TGG - chr5_2:73141743-73141762 Msa0787410:CDS 30.0%
TGACATTCATTAGGTTTCAT+AGG + chr5_2:73141910-73141929 None:intergenic 30.0%
! GCTCAAGATTTTATGTCATA+AGG - chr5_2:73141955-73141974 Msa0787410:CDS 30.0%
! CCATTTTCATCCTATATAGA+AGG + chr5_2:73142020-73142039 None:intergenic 30.0%
CCTTCTATATAGGATGAAAA+TGG - chr5_2:73142017-73142036 Msa0787410:CDS 30.0%
GAAAATGGAGACTGATAATA+AGG - chr5_2:73142032-73142051 Msa0787410:CDS 30.0%
!!! AAATTTTTTTCAGCAACAGC+TGG - chr5_2:73142273-73142292 Msa0787410:intron 30.0%
CTAATCACAAATGATCAACA+TGG - chr5_2:73142402-73142421 Msa0787410:CDS 30.0%
TGTTTAATATGTGTGACCAT+TGG - chr5_2:73142536-73142555 Msa0787410:exon 30.0%
!!! TGAATGTTTTTCTGGTTGTG+GGG + chr5_2:73138605-73138624 None:intergenic 35.0%
!!! GTTGAATGTTTTTCTGGTTG+TGG + chr5_2:73138607-73138626 None:intergenic 35.0%
AATGTTGCTAAGTGTGTGTT+TGG - chr5_2:73138846-73138865 Msa0787410:three_prime_UTR 35.0%
!! AGGACGATGAAAATTGGTTT+TGG - chr5_2:73138873-73138892 Msa0787410:CDS 35.0%
! TTCTGATAATGCTTCAGAGA+TGG - chr5_2:73139045-73139064 Msa0787410:intron 35.0%
! ACACTAATCCTCTTTTTGAC+AGG - chr5_2:73139188-73139207 Msa0787410:intron 35.0%
GGTTTAATCCTGTCAAAAAG+AGG + chr5_2:73139199-73139218 None:intergenic 35.0%
! TTTTGACAGGATTAAACCCT+CGG - chr5_2:73139201-73139220 Msa0787410:intron 35.0%
TTAAACCCTCGGAAACAATA+TGG - chr5_2:73139212-73139231 Msa0787410:intron 35.0%
ACAAACCATATTGTTTCCGA+GGG + chr5_2:73139220-73139239 None:intergenic 35.0%
! TGGAATTTTGAACCGTATTG+TGG - chr5_2:73139263-73139282 Msa0787410:intron 35.0%
! GGAATTTTGAACCGTATTGT+GGG - chr5_2:73139264-73139283 Msa0787410:intron 35.0%
!! TGGTTGAATGGTTCTGATTT+GGG - chr5_2:73139300-73139319 Msa0787410:intron 35.0%
! AAAACGATCCTGAGTTGAAA+TGG - chr5_2:73139364-73139383 Msa0787410:intron 35.0%
TATTCATAAGGCTCGTAACT+AGG - chr5_2:73139561-73139580 Msa0787410:CDS 35.0%
GGAGAAATAATTATGCGAAG+TGG - chr5_2:73139582-73139601 Msa0787410:CDS 35.0%
! AGCAACTCTTTTGTACTTAG+TGG + chr5_2:73139707-73139726 None:intergenic 35.0%
AACTTATTCCAATCAAACCG+TGG - chr5_2:73139730-73139749 Msa0787410:intron 35.0%
ATGACACTTACATGAATCCA+CGG + chr5_2:73139750-73139769 None:intergenic 35.0%
TATGGATAATCAGTGTCACA+TGG - chr5_2:73140060-73140079 Msa0787410:intron 35.0%
AGTCGAAGTAACACACATAA+CGG + chr5_2:73140119-73140138 None:intergenic 35.0%
AAAAGCCATGAATTGCATCA+AGG + chr5_2:73140195-73140214 None:intergenic 35.0%
!! TCACAAACCCACTTTTATCA+TGG + chr5_2:73140277-73140296 None:intergenic 35.0%
! ATAAAAGTGGGTTTGTGAGT+TGG - chr5_2:73140279-73140298 Msa0787410:CDS 35.0%
!!! TTTGTGAGTTGGTTTTTGGA+GGG - chr5_2:73140290-73140309 Msa0787410:intron 35.0%
TGAACTTTGCCAAAAATGTC+AGG - chr5_2:73140366-73140385 Msa0787410:intron 35.0%
GAACTTTGCCAAAAATGTCA+GGG - chr5_2:73140367-73140386 Msa0787410:intron 35.0%
!! ATAGCTCTAAGATAAACCTC+GGG + chr5_2:73140430-73140449 None:intergenic 35.0%
! GCTAATATCTTTCGAGTAAG+GGG + chr5_2:73140497-73140516 None:intergenic 35.0%
! CTGTACTTGAAAGCATAAGT+AGG - chr5_2:73140683-73140702 Msa0787410:intron 35.0%
! TTCTGGATACTTTTGTTGCT+AGG - chr5_2:73140729-73140748 Msa0787410:intron 35.0%
TTTATGCAGGATTTACTGTC+TGG - chr5_2:73140871-73140890 Msa0787410:intron 35.0%
TCAAAACAAGGTTGGACTAT+TGG + chr5_2:73140977-73140996 None:intergenic 35.0%
TTCAAGGTTCAAAACAAGGT+TGG + chr5_2:73140985-73141004 None:intergenic 35.0%
!!! TGACTCATCTCTTGTTTTCA+AGG + chr5_2:73141001-73141020 None:intergenic 35.0%
TACAAAGATTGTGTGTTGGA+TGG - chr5_2:73141052-73141071 Msa0787410:intron 35.0%
ACAAAGATTGTGTGTTGGAT+GGG - chr5_2:73141053-73141072 Msa0787410:intron 35.0%
!! GGAAATTTTTCAAAACGGTG+TGG - chr5_2:73141126-73141145 Msa0787410:intron 35.0%
AAACAATCTCACGAGTGTTT+AGG + chr5_2:73141220-73141239 None:intergenic 35.0%
ATACAGATGAAGATTCAGCA+AGG - chr5_2:73141414-73141433 Msa0787410:intron 35.0%
TACAGATGAAGATTCAGCAA+GGG - chr5_2:73141415-73141434 Msa0787410:intron 35.0%
AGATGTGGTTGTGAAATTAC+AGG - chr5_2:73141487-73141506 Msa0787410:intron 35.0%
GATGTGGTTGTGAAATTACA+GGG - chr5_2:73141488-73141507 Msa0787410:intron 35.0%
AATAAATCAGCACAACTACC+TGG + chr5_2:73141596-73141615 None:intergenic 35.0%
AGTCTAATGTGACATCAAGA+GGG + chr5_2:73141626-73141645 None:intergenic 35.0%
ACTCAAACAGTCAAATGGAT+TGG + chr5_2:73141649-73141668 None:intergenic 35.0%
TGACTACTCAAACAGTCAAA+TGG + chr5_2:73141654-73141673 None:intergenic 35.0%
CCCTTAAAACATCAAACTTC+TGG - chr5_2:73141695-73141714 Msa0787410:CDS 35.0%
! GCCAGAAGTTTGATGTTTTA+AGG + chr5_2:73141699-73141718 None:intergenic 35.0%
GACATCCCAATCTTATGTAT+AGG + chr5_2:73142141-73142160 None:intergenic 35.0%
!! CTTTGTGTTCGATTTTGAGT+AGG + chr5_2:73142377-73142396 None:intergenic 35.0%
!!! TGAATGTTTTTCTGGTTGTG+GGG + chr5_2:73138605-73138624 None:intergenic 35.0%
!!! GTTGAATGTTTTTCTGGTTG+TGG + chr5_2:73138607-73138626 None:intergenic 35.0%
AATGTTGCTAAGTGTGTGTT+TGG - chr5_2:73138846-73138865 Msa0787410:three_prime_UTR 35.0%
!! AGGACGATGAAAATTGGTTT+TGG - chr5_2:73138873-73138892 Msa0787410:CDS 35.0%
! TTCTGATAATGCTTCAGAGA+TGG - chr5_2:73139045-73139064 Msa0787410:intron 35.0%
! ACACTAATCCTCTTTTTGAC+AGG - chr5_2:73139188-73139207 Msa0787410:intron 35.0%
GGTTTAATCCTGTCAAAAAG+AGG + chr5_2:73139199-73139218 None:intergenic 35.0%
! TTTTGACAGGATTAAACCCT+CGG - chr5_2:73139201-73139220 Msa0787410:intron 35.0%
TTAAACCCTCGGAAACAATA+TGG - chr5_2:73139212-73139231 Msa0787410:intron 35.0%
ACAAACCATATTGTTTCCGA+GGG + chr5_2:73139220-73139239 None:intergenic 35.0%
! TGGAATTTTGAACCGTATTG+TGG - chr5_2:73139263-73139282 Msa0787410:intron 35.0%
! GGAATTTTGAACCGTATTGT+GGG - chr5_2:73139264-73139283 Msa0787410:intron 35.0%
!! TGGTTGAATGGTTCTGATTT+GGG - chr5_2:73139300-73139319 Msa0787410:intron 35.0%
! AAAACGATCCTGAGTTGAAA+TGG - chr5_2:73139364-73139383 Msa0787410:intron 35.0%
TATTCATAAGGCTCGTAACT+AGG - chr5_2:73139561-73139580 Msa0787410:CDS 35.0%
GGAGAAATAATTATGCGAAG+TGG - chr5_2:73139582-73139601 Msa0787410:CDS 35.0%
! AGCAACTCTTTTGTACTTAG+TGG + chr5_2:73139707-73139726 None:intergenic 35.0%
AACTTATTCCAATCAAACCG+TGG - chr5_2:73139730-73139749 Msa0787410:intron 35.0%
ATGACACTTACATGAATCCA+CGG + chr5_2:73139750-73139769 None:intergenic 35.0%
TATGGATAATCAGTGTCACA+TGG - chr5_2:73140060-73140079 Msa0787410:intron 35.0%
AGTCGAAGTAACACACATAA+CGG + chr5_2:73140119-73140138 None:intergenic 35.0%
AAAAGCCATGAATTGCATCA+AGG + chr5_2:73140195-73140214 None:intergenic 35.0%
!! TCACAAACCCACTTTTATCA+TGG + chr5_2:73140277-73140296 None:intergenic 35.0%
! ATAAAAGTGGGTTTGTGAGT+TGG - chr5_2:73140279-73140298 Msa0787410:CDS 35.0%
!!! TTTGTGAGTTGGTTTTTGGA+GGG - chr5_2:73140290-73140309 Msa0787410:intron 35.0%
TGAACTTTGCCAAAAATGTC+AGG - chr5_2:73140366-73140385 Msa0787410:intron 35.0%
GAACTTTGCCAAAAATGTCA+GGG - chr5_2:73140367-73140386 Msa0787410:intron 35.0%
!! ATAGCTCTAAGATAAACCTC+GGG + chr5_2:73140430-73140449 None:intergenic 35.0%
! GCTAATATCTTTCGAGTAAG+GGG + chr5_2:73140497-73140516 None:intergenic 35.0%
! CTGTACTTGAAAGCATAAGT+AGG - chr5_2:73140683-73140702 Msa0787410:intron 35.0%
! TTCTGGATACTTTTGTTGCT+AGG - chr5_2:73140729-73140748 Msa0787410:intron 35.0%
TTTATGCAGGATTTACTGTC+TGG - chr5_2:73140871-73140890 Msa0787410:intron 35.0%
TCAAAACAAGGTTGGACTAT+TGG + chr5_2:73140977-73140996 None:intergenic 35.0%
TTCAAGGTTCAAAACAAGGT+TGG + chr5_2:73140985-73141004 None:intergenic 35.0%
!!! TGACTCATCTCTTGTTTTCA+AGG + chr5_2:73141001-73141020 None:intergenic 35.0%
TACAAAGATTGTGTGTTGGA+TGG - chr5_2:73141052-73141071 Msa0787410:intron 35.0%
ACAAAGATTGTGTGTTGGAT+GGG - chr5_2:73141053-73141072 Msa0787410:intron 35.0%
!! GGAAATTTTTCAAAACGGTG+TGG - chr5_2:73141126-73141145 Msa0787410:intron 35.0%
AAACAATCTCACGAGTGTTT+AGG + chr5_2:73141220-73141239 None:intergenic 35.0%
ATACAGATGAAGATTCAGCA+AGG - chr5_2:73141414-73141433 Msa0787410:intron 35.0%
TACAGATGAAGATTCAGCAA+GGG - chr5_2:73141415-73141434 Msa0787410:intron 35.0%
AGATGTGGTTGTGAAATTAC+AGG - chr5_2:73141487-73141506 Msa0787410:intron 35.0%
GATGTGGTTGTGAAATTACA+GGG - chr5_2:73141488-73141507 Msa0787410:intron 35.0%
AATAAATCAGCACAACTACC+TGG + chr5_2:73141596-73141615 None:intergenic 35.0%
AGTCTAATGTGACATCAAGA+GGG + chr5_2:73141626-73141645 None:intergenic 35.0%
ACTCAAACAGTCAAATGGAT+TGG + chr5_2:73141649-73141668 None:intergenic 35.0%
TGACTACTCAAACAGTCAAA+TGG + chr5_2:73141654-73141673 None:intergenic 35.0%
CCCTTAAAACATCAAACTTC+TGG - chr5_2:73141695-73141714 Msa0787410:CDS 35.0%
! GCCAGAAGTTTGATGTTTTA+AGG + chr5_2:73141699-73141718 None:intergenic 35.0%
GACATCCCAATCTTATGTAT+AGG + chr5_2:73142141-73142160 None:intergenic 35.0%
!! CTTTGTGTTCGATTTTGAGT+AGG + chr5_2:73142377-73142396 None:intergenic 35.0%
GAACGCAGTGATACGAAATT+TGG + chr5_2:73138648-73138667 None:intergenic 40.0%
AACATTTGCAGGGAGAAAGA+GGG + chr5_2:73138710-73138729 None:intergenic 40.0%
TACAAACAGTAGGAGACAGT+TGG + chr5_2:73138780-73138799 None:intergenic 40.0%
!! CTAAGTGTGTGTTTGGTTCT+AGG - chr5_2:73138853-73138872 Msa0787410:exon 40.0%
!! GGTTCTAGGACGATGAAAAT+TGG - chr5_2:73138867-73138886 Msa0787410:CDS 40.0%
CACAAACCATATTGTTTCCG+AGG + chr5_2:73139221-73139240 None:intergenic 40.0%
! TTTTCGCCTTTGTGGTTGAA+TGG - chr5_2:73139288-73139307 Msa0787410:intron 40.0%
TCAGAACCATTCAACCACAA+AGG + chr5_2:73139297-73139316 None:intergenic 40.0%
!! GTGGTTGAATGGTTCTGATT+TGG - chr5_2:73139299-73139318 Msa0787410:intron 40.0%
! GGATCATCACAGCTTTTGAA+AGG - chr5_2:73139423-73139442 Msa0787410:intron 40.0%
GGAACATCCATCTATCTTGT+TGG - chr5_2:73139444-73139463 Msa0787410:intron 40.0%
GGAATCACCAACAAGATAGA+TGG + chr5_2:73139454-73139473 None:intergenic 40.0%
!! CACTTTCTGGTTGATTTCAG+TGG + chr5_2:73139475-73139494 None:intergenic 40.0%
CACTGAAATCAACCAGAAAG+TGG - chr5_2:73139473-73139492 Msa0787410:intron 40.0%
CAGAGTTGCACATCAATCAT+AGG + chr5_2:73139627-73139646 None:intergenic 40.0%
TGATGTGCAACTCTGATCAA+TGG - chr5_2:73139632-73139651 Msa0787410:CDS 40.0%
ACATGAATCCACGGTTTGAT+TGG + chr5_2:73139741-73139760 None:intergenic 40.0%
TACAAATTGAGGAACCAGTC+TGG - chr5_2:73140152-73140171 Msa0787410:intron 40.0%
ATGAATTGCATCAAGGACAG+AGG + chr5_2:73140188-73140207 None:intergenic 40.0%
TCTGTCCTTGATGCAATTCA+TGG - chr5_2:73140187-73140206 Msa0787410:intron 40.0%
!! TATCATGGCCAACCACTTTT+GGG + chr5_2:73140262-73140281 None:intergenic 40.0%
! TTATCATGGCCAACCACTTT+TGG + chr5_2:73140263-73140282 None:intergenic 40.0%
! TGGTTGGCCATGATAAAAGT+GGG - chr5_2:73140267-73140286 Msa0787410:CDS 40.0%
!!! TGGGTTTGTGAGTTGGTTTT+TGG - chr5_2:73140286-73140305 Msa0787410:CDS 40.0%
!!! GTTTGTGAGTTGGTTTTTGG+AGG - chr5_2:73140289-73140308 Msa0787410:intron 40.0%
!!! AGTTGGTTTTTGGAGGGTTT+TGG - chr5_2:73140296-73140315 Msa0787410:intron 40.0%
!! TAGCTCTAAGATAAACCTCG+GGG + chr5_2:73140429-73140448 None:intergenic 40.0%
GCAACATTAGGAGGTAAACA+TGG - chr5_2:73140816-73140835 Msa0787410:intron 40.0%
CTGCTGGAAGATCTGATAAA+TGG - chr5_2:73140841-73140860 Msa0787410:intron 40.0%
AAATGGCGACATCTTTATGC+AGG - chr5_2:73140858-73140877 Msa0787410:intron 40.0%
CAAAGATTGTGTGTTGGATG+GGG - chr5_2:73141054-73141073 Msa0787410:intron 40.0%
AAAGATTGTGTGTTGGATGG+GGG - chr5_2:73141055-73141074 Msa0787410:intron 40.0%
!! ATTTTTCAAAACGGTGTGGG+TGG - chr5_2:73141130-73141149 Msa0787410:intron 40.0%
!! TTTTTCAAAACGGTGTGGGT+GGG - chr5_2:73141131-73141150 Msa0787410:intron 40.0%
CTCGTGAGATTGTTTGAAAG+AGG - chr5_2:73141225-73141244 Msa0787410:intron 40.0%
TGCATATACGAATGCAGATG+TGG - chr5_2:73141472-73141491 Msa0787410:intron 40.0%
TGGTTGTGAAATTACAGGGA+TGG - chr5_2:73141492-73141511 Msa0787410:intron 40.0%
GGTTGTGAAATTACAGGGAT+GGG - chr5_2:73141493-73141512 Msa0787410:intron 40.0%
TCCTGCTTATGCTAAAAGTG+TGG - chr5_2:73141517-73141536 Msa0787410:intron 40.0%
! TTATGCTAAAAGTGTGGCAC+AGG - chr5_2:73141523-73141542 Msa0787410:intron 40.0%
! TATGCTAAAAGTGTGGCACA+GGG - chr5_2:73141524-73141543 Msa0787410:intron 40.0%
CTGGAAGTTTCTTGTCTGAT+AGG + chr5_2:73141577-73141596 None:intergenic 40.0%
CTATCAGACAAGAAACTTCC+AGG - chr5_2:73141575-73141594 Msa0787410:intron 40.0%
GAGTCTAATGTGACATCAAG+AGG + chr5_2:73141627-73141646 None:intergenic 40.0%
AAACTTCTGGCCTGATAACT+TGG - chr5_2:73141708-73141727 Msa0787410:CDS 40.0%
AAGCAACTGTCCAAGTTATC+AGG + chr5_2:73141721-73141740 None:intergenic 40.0%
TACATAAGATTGGGATGTCG+TGG - chr5_2:73142142-73142161 Msa0787410:intron 40.0%
AAACTTAGCATACAAAGGGG+TGG + chr5_2:73142479-73142498 None:intergenic 40.0%
GAACGCAGTGATACGAAATT+TGG + chr5_2:73138648-73138667 None:intergenic 40.0%
AACATTTGCAGGGAGAAAGA+GGG + chr5_2:73138710-73138729 None:intergenic 40.0%
TACAAACAGTAGGAGACAGT+TGG + chr5_2:73138780-73138799 None:intergenic 40.0%
!! CTAAGTGTGTGTTTGGTTCT+AGG - chr5_2:73138853-73138872 Msa0787410:exon 40.0%
!! GGTTCTAGGACGATGAAAAT+TGG - chr5_2:73138867-73138886 Msa0787410:CDS 40.0%
CACAAACCATATTGTTTCCG+AGG + chr5_2:73139221-73139240 None:intergenic 40.0%
! TTTTCGCCTTTGTGGTTGAA+TGG - chr5_2:73139288-73139307 Msa0787410:intron 40.0%
TCAGAACCATTCAACCACAA+AGG + chr5_2:73139297-73139316 None:intergenic 40.0%
!! GTGGTTGAATGGTTCTGATT+TGG - chr5_2:73139299-73139318 Msa0787410:intron 40.0%
! GGATCATCACAGCTTTTGAA+AGG - chr5_2:73139423-73139442 Msa0787410:intron 40.0%
GGAACATCCATCTATCTTGT+TGG - chr5_2:73139444-73139463 Msa0787410:intron 40.0%
GGAATCACCAACAAGATAGA+TGG + chr5_2:73139454-73139473 None:intergenic 40.0%
!! CACTTTCTGGTTGATTTCAG+TGG + chr5_2:73139475-73139494 None:intergenic 40.0%
CACTGAAATCAACCAGAAAG+TGG - chr5_2:73139473-73139492 Msa0787410:intron 40.0%
CAGAGTTGCACATCAATCAT+AGG + chr5_2:73139627-73139646 None:intergenic 40.0%
TGATGTGCAACTCTGATCAA+TGG - chr5_2:73139632-73139651 Msa0787410:CDS 40.0%
ACATGAATCCACGGTTTGAT+TGG + chr5_2:73139741-73139760 None:intergenic 40.0%
TACAAATTGAGGAACCAGTC+TGG - chr5_2:73140152-73140171 Msa0787410:intron 40.0%
ATGAATTGCATCAAGGACAG+AGG + chr5_2:73140188-73140207 None:intergenic 40.0%
TCTGTCCTTGATGCAATTCA+TGG - chr5_2:73140187-73140206 Msa0787410:intron 40.0%
!! TATCATGGCCAACCACTTTT+GGG + chr5_2:73140262-73140281 None:intergenic 40.0%
! TTATCATGGCCAACCACTTT+TGG + chr5_2:73140263-73140282 None:intergenic 40.0%
! TGGTTGGCCATGATAAAAGT+GGG - chr5_2:73140267-73140286 Msa0787410:CDS 40.0%
!!! TGGGTTTGTGAGTTGGTTTT+TGG - chr5_2:73140286-73140305 Msa0787410:CDS 40.0%
!!! GTTTGTGAGTTGGTTTTTGG+AGG - chr5_2:73140289-73140308 Msa0787410:intron 40.0%
!!! AGTTGGTTTTTGGAGGGTTT+TGG - chr5_2:73140296-73140315 Msa0787410:intron 40.0%
!! TAGCTCTAAGATAAACCTCG+GGG + chr5_2:73140429-73140448 None:intergenic 40.0%
GCAACATTAGGAGGTAAACA+TGG - chr5_2:73140816-73140835 Msa0787410:intron 40.0%
CTGCTGGAAGATCTGATAAA+TGG - chr5_2:73140841-73140860 Msa0787410:intron 40.0%
AAATGGCGACATCTTTATGC+AGG - chr5_2:73140858-73140877 Msa0787410:intron 40.0%
CAAAGATTGTGTGTTGGATG+GGG - chr5_2:73141054-73141073 Msa0787410:intron 40.0%
AAAGATTGTGTGTTGGATGG+GGG - chr5_2:73141055-73141074 Msa0787410:intron 40.0%
!! ATTTTTCAAAACGGTGTGGG+TGG - chr5_2:73141130-73141149 Msa0787410:intron 40.0%
!! TTTTTCAAAACGGTGTGGGT+GGG - chr5_2:73141131-73141150 Msa0787410:intron 40.0%
CTCGTGAGATTGTTTGAAAG+AGG - chr5_2:73141225-73141244 Msa0787410:intron 40.0%
TGCATATACGAATGCAGATG+TGG - chr5_2:73141472-73141491 Msa0787410:intron 40.0%
TGGTTGTGAAATTACAGGGA+TGG - chr5_2:73141492-73141511 Msa0787410:intron 40.0%
GGTTGTGAAATTACAGGGAT+GGG - chr5_2:73141493-73141512 Msa0787410:intron 40.0%
TCCTGCTTATGCTAAAAGTG+TGG - chr5_2:73141517-73141536 Msa0787410:intron 40.0%
! TTATGCTAAAAGTGTGGCAC+AGG - chr5_2:73141523-73141542 Msa0787410:intron 40.0%
! TATGCTAAAAGTGTGGCACA+GGG - chr5_2:73141524-73141543 Msa0787410:intron 40.0%
CTGGAAGTTTCTTGTCTGAT+AGG + chr5_2:73141577-73141596 None:intergenic 40.0%
CTATCAGACAAGAAACTTCC+AGG - chr5_2:73141575-73141594 Msa0787410:intron 40.0%
GAGTCTAATGTGACATCAAG+AGG + chr5_2:73141627-73141646 None:intergenic 40.0%
AAACTTCTGGCCTGATAACT+TGG - chr5_2:73141708-73141727 Msa0787410:CDS 40.0%
AAGCAACTGTCCAAGTTATC+AGG + chr5_2:73141721-73141740 None:intergenic 40.0%
TACATAAGATTGGGATGTCG+TGG - chr5_2:73142142-73142161 Msa0787410:intron 40.0%
AAACTTAGCATACAAAGGGG+TGG + chr5_2:73142479-73142498 None:intergenic 40.0%
!!! GTTTTTCTGGTTGTGGGGTT+TGG + chr5_2:73138600-73138619 None:intergenic 45.0%
GAACATTTGCAGGGAGAAAG+AGG + chr5_2:73138711-73138730 None:intergenic 45.0%
GCAGTGAAGGAACATTTGCA+GGG + chr5_2:73138720-73138739 None:intergenic 45.0%
! GTAAGTTGTGGTGGAAACAG+GGG + chr5_2:73138742-73138761 None:intergenic 45.0%
! CGTAAGTTGTGGTGGAAACA+GGG + chr5_2:73138743-73138762 None:intergenic 45.0%
! TCGTAAGTTGTGGTGGAAAC+AGG + chr5_2:73138744-73138763 None:intergenic 45.0%
TGTTTCCACCACAACTTACG+AGG - chr5_2:73138743-73138762 Msa0787410:three_prime_UTR 45.0%
AAGTACCTCGTAAGTTGTGG+TGG + chr5_2:73138751-73138770 None:intergenic 45.0%
AGCAAGTACCTCGTAAGTTG+TGG + chr5_2:73138754-73138773 None:intergenic 45.0%
AAGGCGAAAAGCCCACAATA+CGG + chr5_2:73139278-73139297 None:intergenic 45.0%
!! TGAATGGTTCTGATTTGGGC+AGG - chr5_2:73139304-73139323 Msa0787410:intron 45.0%
ATGTCAGGCCATTTCAACTC+AGG + chr5_2:73139375-73139394 None:intergenic 45.0%
GTTGAAATGGCCTGACATCA+TGG - chr5_2:73139377-73139396 Msa0787410:intron 45.0%
GCCTGACATCATGGAATCAT+GGG - chr5_2:73139386-73139405 Msa0787410:intron 45.0%
TCCCATGATTCCATGATGTC+AGG + chr5_2:73139390-73139409 None:intergenic 45.0%
CACACATAACGGCTACAGAA+AGG + chr5_2:73140108-73140127 None:intergenic 45.0%
GAGGAGGAAAAAAACCAGAC+TGG + chr5_2:73140169-73140188 None:intergenic 45.0%
AATTGCATCAAGGACAGAGG+AGG + chr5_2:73140185-73140204 None:intergenic 45.0%
AATCATTTCAGACCCCATCC+TGG - chr5_2:73140233-73140252 Msa0787410:CDS 45.0%
!!! ACTTTTGGGTTTCCAGGATG+GGG + chr5_2:73140248-73140267 None:intergenic 45.0%
!!! CACTTTTGGGTTTCCAGGAT+GGG + chr5_2:73140249-73140268 None:intergenic 45.0%
! GTGGTTGGCCATGATAAAAG+TGG - chr5_2:73140266-73140285 Msa0787410:CDS 45.0%
!! TGGTTTTTGGAGGGTTTTGG+AGG - chr5_2:73140299-73140318 Msa0787410:intron 45.0%
!!! GGTTTTTGGAGGGTTTTGGA+GGG - chr5_2:73140300-73140319 Msa0787410:intron 45.0%
AATCCTAGACTTGCAACCCT+CGG - chr5_2:73140395-73140414 Msa0787410:intron 45.0%
AGTGCTCTGCTAGTCATGTA+AGG - chr5_2:73140784-73140803 Msa0787410:intron 45.0%
GTGCTCTGCTAGTCATGTAA+GGG - chr5_2:73140785-73140804 Msa0787410:intron 45.0%
! TTGTCACAGACTGAAGCATC+AGG - chr5_2:73140894-73140913 Msa0787410:intron 45.0%
AGATGAAGATTCAGCAAGGG+AGG - chr5_2:73141418-73141437 Msa0787410:intron 45.0%
! GCCACACTTTTAGCATAAGC+AGG + chr5_2:73141521-73141540 None:intergenic 45.0%
GTTCAACTCTGTCATCATGC+AGG - chr5_2:73142106-73142125 Msa0787410:intron 45.0%
AAACATCAAACCCCCTGGTT+GGG - chr5_2:73142174-73142193 Msa0787410:intron 45.0%
GTTTCACCACCTTCACTTGA+TGG + chr5_2:73142202-73142221 None:intergenic 45.0%
AGTGAAGGTGGTGAAACTCT+TGG - chr5_2:73142205-73142224 Msa0787410:intron 45.0%
CTCAAGATCGTCACATCCAA+TGG + chr5_2:73142555-73142574 None:intergenic 45.0%
!!! GTTTTTCTGGTTGTGGGGTT+TGG + chr5_2:73138600-73138619 None:intergenic 45.0%
GAACATTTGCAGGGAGAAAG+AGG + chr5_2:73138711-73138730 None:intergenic 45.0%
GCAGTGAAGGAACATTTGCA+GGG + chr5_2:73138720-73138739 None:intergenic 45.0%
! GTAAGTTGTGGTGGAAACAG+GGG + chr5_2:73138742-73138761 None:intergenic 45.0%
! CGTAAGTTGTGGTGGAAACA+GGG + chr5_2:73138743-73138762 None:intergenic 45.0%
! TCGTAAGTTGTGGTGGAAAC+AGG + chr5_2:73138744-73138763 None:intergenic 45.0%
TGTTTCCACCACAACTTACG+AGG - chr5_2:73138743-73138762 Msa0787410:three_prime_UTR 45.0%
AAGTACCTCGTAAGTTGTGG+TGG + chr5_2:73138751-73138770 None:intergenic 45.0%
AGCAAGTACCTCGTAAGTTG+TGG + chr5_2:73138754-73138773 None:intergenic 45.0%
AAGGCGAAAAGCCCACAATA+CGG + chr5_2:73139278-73139297 None:intergenic 45.0%
!! TGAATGGTTCTGATTTGGGC+AGG - chr5_2:73139304-73139323 Msa0787410:intron 45.0%
ATGTCAGGCCATTTCAACTC+AGG + chr5_2:73139375-73139394 None:intergenic 45.0%
GTTGAAATGGCCTGACATCA+TGG - chr5_2:73139377-73139396 Msa0787410:intron 45.0%
GCCTGACATCATGGAATCAT+GGG - chr5_2:73139386-73139405 Msa0787410:intron 45.0%
TCCCATGATTCCATGATGTC+AGG + chr5_2:73139390-73139409 None:intergenic 45.0%
CACACATAACGGCTACAGAA+AGG + chr5_2:73140108-73140127 None:intergenic 45.0%
GAGGAGGAAAAAAACCAGAC+TGG + chr5_2:73140169-73140188 None:intergenic 45.0%
AATTGCATCAAGGACAGAGG+AGG + chr5_2:73140185-73140204 None:intergenic 45.0%
AATCATTTCAGACCCCATCC+TGG - chr5_2:73140233-73140252 Msa0787410:CDS 45.0%
!!! ACTTTTGGGTTTCCAGGATG+GGG + chr5_2:73140248-73140267 None:intergenic 45.0%
!!! CACTTTTGGGTTTCCAGGAT+GGG + chr5_2:73140249-73140268 None:intergenic 45.0%
! GTGGTTGGCCATGATAAAAG+TGG - chr5_2:73140266-73140285 Msa0787410:CDS 45.0%
!! TGGTTTTTGGAGGGTTTTGG+AGG - chr5_2:73140299-73140318 Msa0787410:intron 45.0%
!!! GGTTTTTGGAGGGTTTTGGA+GGG - chr5_2:73140300-73140319 Msa0787410:intron 45.0%
AATCCTAGACTTGCAACCCT+CGG - chr5_2:73140395-73140414 Msa0787410:intron 45.0%
AGTGCTCTGCTAGTCATGTA+AGG - chr5_2:73140784-73140803 Msa0787410:intron 45.0%
GTGCTCTGCTAGTCATGTAA+GGG - chr5_2:73140785-73140804 Msa0787410:intron 45.0%
! TTGTCACAGACTGAAGCATC+AGG - chr5_2:73140894-73140913 Msa0787410:intron 45.0%
AGATGAAGATTCAGCAAGGG+AGG - chr5_2:73141418-73141437 Msa0787410:intron 45.0%
! GCCACACTTTTAGCATAAGC+AGG + chr5_2:73141521-73141540 None:intergenic 45.0%
GTTCAACTCTGTCATCATGC+AGG - chr5_2:73142106-73142125 Msa0787410:intron 45.0%
AAACATCAAACCCCCTGGTT+GGG - chr5_2:73142174-73142193 Msa0787410:intron 45.0%
GTTTCACCACCTTCACTTGA+TGG + chr5_2:73142202-73142221 None:intergenic 45.0%
AGTGAAGGTGGTGAAACTCT+TGG - chr5_2:73142205-73142224 Msa0787410:intron 45.0%
CTCAAGATCGTCACATCCAA+TGG + chr5_2:73142555-73142574 None:intergenic 45.0%
AGGAAGAAACCTGAGAGCAG+CGG + chr5_2:73138577-73138596 None:intergenic 50.0%
!! TTTCTGGTTGTGGGGTTTGG+AGG + chr5_2:73138597-73138616 None:intergenic 50.0%
GGCAGTGAAGGAACATTTGC+AGG + chr5_2:73138721-73138740 None:intergenic 50.0%
!! ACGATCAGAGTGTTGCAGTC+AGG - chr5_2:73139145-73139164 Msa0787410:intron 50.0%
! TTGTGGGCTTTTCGCCTTTG+TGG - chr5_2:73139280-73139299 Msa0787410:intron 50.0%
GGCCTGACATCATGGAATCA+TGG - chr5_2:73139385-73139404 Msa0787410:intron 50.0%
! CAAGCTCTTCAGCCACTTTC+TGG + chr5_2:73139488-73139507 None:intergenic 50.0%
!! TGAAGAGCTTGCTACTGGTC+TGG - chr5_2:73139497-73139516 Msa0787410:intron 50.0%
!! GAAGAGCTTGCTACTGGTCT+GGG - chr5_2:73139498-73139517 Msa0787410:intron 50.0%
!! AAGAGCTTGCTACTGGTCTG+GGG - chr5_2:73139499-73139518 Msa0787410:intron 50.0%
TGGGCTATTCCTTCCACCAT+AGG - chr5_2:73139802-73139821 Msa0787410:intron 50.0%
GGGCTATTCCTTCCACCATA+GGG - chr5_2:73139803-73139822 Msa0787410:intron 50.0%
TGAAGAACCTTGCAGCCCTA+TGG + chr5_2:73139821-73139840 None:intergenic 50.0%
!!! CCACTTTTGGGTTTCCAGGA+TGG + chr5_2:73140250-73140269 None:intergenic 50.0%
CCATCCTGGAAACCCAAAAG+TGG - chr5_2:73140247-73140266 Msa0787410:CDS 50.0%
!!! CCAACCACTTTTGGGTTTCC+AGG + chr5_2:73140254-73140273 None:intergenic 50.0%
CCTGGAAACCCAAAAGTGGT+TGG - chr5_2:73140251-73140270 Msa0787410:CDS 50.0%
TAAGATAAACCTCGGGGCCA+AGG + chr5_2:73140423-73140442 None:intergenic 50.0%
AAGTACAGTGCCTTCGCCTT+CGG + chr5_2:73140671-73140690 None:intergenic 50.0%
AGGGCAGCAGTTGCAACATT+AGG - chr5_2:73140804-73140823 Msa0787410:intron 50.0%
GCAGCAGTTGCAACATTAGG+AGG - chr5_2:73140807-73140826 Msa0787410:intron 50.0%
GATTGGGATGTCGTGGTGAT+TGG - chr5_2:73142149-73142168 Msa0787410:intron 50.0%
CAACCAGGGGGTTTGATGTT+TGG + chr5_2:73142175-73142194 None:intergenic 50.0%
CAAACATCAAACCCCCTGGT+TGG - chr5_2:73142173-73142192 Msa0787410:intron 50.0%
! ACTTGATGGATCCCAACCAG+GGG + chr5_2:73142188-73142207 None:intergenic 50.0%
! CACTTGATGGATCCCAACCA+GGG + chr5_2:73142189-73142208 None:intergenic 50.0%
! TCACTTGATGGATCCCAACC+AGG + chr5_2:73142190-73142209 None:intergenic 50.0%
GGTTGGGATCCATCAAGTGA+AGG - chr5_2:73142190-73142209 Msa0787410:intron 50.0%
TGGGATCCATCAAGTGAAGG+TGG - chr5_2:73142193-73142212 Msa0787410:intron 50.0%
TCAGCAACAGCTGGAGTTCT+TGG - chr5_2:73142282-73142301 Msa0787410:intron 50.0%
AGGAAGAAACCTGAGAGCAG+CGG + chr5_2:73138577-73138596 None:intergenic 50.0%
!! TTTCTGGTTGTGGGGTTTGG+AGG + chr5_2:73138597-73138616 None:intergenic 50.0%
GGCAGTGAAGGAACATTTGC+AGG + chr5_2:73138721-73138740 None:intergenic 50.0%
!! ACGATCAGAGTGTTGCAGTC+AGG - chr5_2:73139145-73139164 Msa0787410:intron 50.0%
! TTGTGGGCTTTTCGCCTTTG+TGG - chr5_2:73139280-73139299 Msa0787410:intron 50.0%
GGCCTGACATCATGGAATCA+TGG - chr5_2:73139385-73139404 Msa0787410:intron 50.0%
! CAAGCTCTTCAGCCACTTTC+TGG + chr5_2:73139488-73139507 None:intergenic 50.0%
!! TGAAGAGCTTGCTACTGGTC+TGG - chr5_2:73139497-73139516 Msa0787410:intron 50.0%
!! GAAGAGCTTGCTACTGGTCT+GGG - chr5_2:73139498-73139517 Msa0787410:intron 50.0%
!! AAGAGCTTGCTACTGGTCTG+GGG - chr5_2:73139499-73139518 Msa0787410:intron 50.0%
TGGGCTATTCCTTCCACCAT+AGG - chr5_2:73139802-73139821 Msa0787410:intron 50.0%
GGGCTATTCCTTCCACCATA+GGG - chr5_2:73139803-73139822 Msa0787410:intron 50.0%
TGAAGAACCTTGCAGCCCTA+TGG + chr5_2:73139821-73139840 None:intergenic 50.0%
!!! CCACTTTTGGGTTTCCAGGA+TGG + chr5_2:73140250-73140269 None:intergenic 50.0%
CCATCCTGGAAACCCAAAAG+TGG - chr5_2:73140247-73140266 Msa0787410:CDS 50.0%
!!! CCAACCACTTTTGGGTTTCC+AGG + chr5_2:73140254-73140273 None:intergenic 50.0%
CCTGGAAACCCAAAAGTGGT+TGG - chr5_2:73140251-73140270 Msa0787410:CDS 50.0%
TAAGATAAACCTCGGGGCCA+AGG + chr5_2:73140423-73140442 None:intergenic 50.0%
AAGTACAGTGCCTTCGCCTT+CGG + chr5_2:73140671-73140690 None:intergenic 50.0%
AGGGCAGCAGTTGCAACATT+AGG - chr5_2:73140804-73140823 Msa0787410:intron 50.0%
GCAGCAGTTGCAACATTAGG+AGG - chr5_2:73140807-73140826 Msa0787410:intron 50.0%
GATTGGGATGTCGTGGTGAT+TGG - chr5_2:73142149-73142168 Msa0787410:intron 50.0%
CAACCAGGGGGTTTGATGTT+TGG + chr5_2:73142175-73142194 None:intergenic 50.0%
CAAACATCAAACCCCCTGGT+TGG - chr5_2:73142173-73142192 Msa0787410:intron 50.0%
! ACTTGATGGATCCCAACCAG+GGG + chr5_2:73142188-73142207 None:intergenic 50.0%
! CACTTGATGGATCCCAACCA+GGG + chr5_2:73142189-73142208 None:intergenic 50.0%
! TCACTTGATGGATCCCAACC+AGG + chr5_2:73142190-73142209 None:intergenic 50.0%
GGTTGGGATCCATCAAGTGA+AGG - chr5_2:73142190-73142209 Msa0787410:intron 50.0%
TGGGATCCATCAAGTGAAGG+TGG - chr5_2:73142193-73142212 Msa0787410:intron 50.0%
TCAGCAACAGCTGGAGTTCT+TGG - chr5_2:73142282-73142301 Msa0787410:intron 50.0%
GGAAGAAACCTGAGAGCAGC+GGG + chr5_2:73138576-73138595 None:intergenic 55.0%
!! GTGGCTGAAGAGCTTGCTAC+TGG - chr5_2:73139492-73139511 Msa0787410:intron 55.0%
AGAACCTTGCAGCCCTATGG+TGG + chr5_2:73139818-73139837 None:intergenic 55.0%
GTTCCGAGGGTTGCAAGTCT+AGG + chr5_2:73140401-73140420 None:intergenic 55.0%
ACTTGCAACCCTCGGAACCT+TGG - chr5_2:73140403-73140422 Msa0787410:CDS 55.0%
! ATTCCAGGGCTGCTTGCTGA+AGG - chr5_2:73140631-73140650 Msa0787410:intron 55.0%
! GGTTCTGACTCAGTAGCCGA+AGG - chr5_2:73140652-73140671 Msa0787410:intron 55.0%
!! GGAGGTAAACATGGTGCTGC+TGG - chr5_2:73140825-73140844 Msa0787410:intron 55.0%
GTGTGTTGGATGGGGGATTC+AGG - chr5_2:73141062-73141081 Msa0787410:intron 55.0%
TGTTGGATGGGGGATTCAGG+AGG - chr5_2:73141065-73141084 Msa0787410:intron 55.0%
GATTCAGGAGGCGAAGAGTG+TGG - chr5_2:73141077-73141096 Msa0787410:intron 55.0%
TTCAAAACGGTGTGGGTGGG+TGG - chr5_2:73141134-73141153 Msa0787410:intron 55.0%
TCAAAACGGTGTGGGTGGGT+GGG - chr5_2:73141135-73141154 Msa0787410:intron 55.0%
TGGCCAAACATCAAACCCCC+TGG - chr5_2:73142169-73142188 Msa0787410:intron 55.0%
! CTTGATGGATCCCAACCAGG+GGG + chr5_2:73142187-73142206 None:intergenic 55.0%
GGAAGAAACCTGAGAGCAGC+GGG + chr5_2:73138576-73138595 None:intergenic 55.0%
!! GTGGCTGAAGAGCTTGCTAC+TGG - chr5_2:73139492-73139511 Msa0787410:intron 55.0%
AGAACCTTGCAGCCCTATGG+TGG + chr5_2:73139818-73139837 None:intergenic 55.0%
GTTCCGAGGGTTGCAAGTCT+AGG + chr5_2:73140401-73140420 None:intergenic 55.0%
ACTTGCAACCCTCGGAACCT+TGG - chr5_2:73140403-73140422 Msa0787410:CDS 55.0%
! ATTCCAGGGCTGCTTGCTGA+AGG - chr5_2:73140631-73140650 Msa0787410:intron 55.0%
! GGTTCTGACTCAGTAGCCGA+AGG - chr5_2:73140652-73140671 Msa0787410:intron 55.0%
!! GGAGGTAAACATGGTGCTGC+TGG - chr5_2:73140825-73140844 Msa0787410:intron 55.0%
GTGTGTTGGATGGGGGATTC+AGG - chr5_2:73141062-73141081 Msa0787410:intron 55.0%
TGTTGGATGGGGGATTCAGG+AGG - chr5_2:73141065-73141084 Msa0787410:intron 55.0%
GATTCAGGAGGCGAAGAGTG+TGG - chr5_2:73141077-73141096 Msa0787410:intron 55.0%
TTCAAAACGGTGTGGGTGGG+TGG - chr5_2:73141134-73141153 Msa0787410:intron 55.0%
TCAAAACGGTGTGGGTGGGT+GGG - chr5_2:73141135-73141154 Msa0787410:intron 55.0%
TGGCCAAACATCAAACCCCC+TGG - chr5_2:73142169-73142188 Msa0787410:intron 55.0%
! CTTGATGGATCCCAACCAGG+GGG + chr5_2:73142187-73142206 None:intergenic 55.0%
AAACCTGAGAGCAGCGGGAG+TGG + chr5_2:73138571-73138590 None:intergenic 60.0%
GGTGGAAACAGGGGCAGTGA+AGG + chr5_2:73138733-73138752 None:intergenic 60.0%
TCATGGGAATCGCTCGCTGC+TGG - chr5_2:73139402-73139421 Msa0787410:intron 60.0%
! CCTTGCAGCCCTATGGTGGA+AGG + chr5_2:73139814-73139833 None:intergenic 60.0%
CCTTCCACCATAGGGCTGCA+AGG - chr5_2:73139811-73139830 Msa0787410:intron 60.0%
GAACCTTCAGCAAGCAGCCC+TGG + chr5_2:73140637-73140656 None:intergenic 60.0%
GACTCAGTAGCCGAAGGCGA+AGG - chr5_2:73140658-73140677 Msa0787410:intron 60.0%
CAAAACGGTGTGGGTGGGTG+GGG - chr5_2:73141136-73141155 Msa0787410:intron 60.0%
AAAACGGTGTGGGTGGGTGG+GGG - chr5_2:73141137-73141156 Msa0787410:intron 60.0%
AAACCTGAGAGCAGCGGGAG+TGG + chr5_2:73138571-73138590 None:intergenic 60.0%
GGTGGAAACAGGGGCAGTGA+AGG + chr5_2:73138733-73138752 None:intergenic 60.0%
TCATGGGAATCGCTCGCTGC+TGG - chr5_2:73139402-73139421 Msa0787410:intron 60.0%
! CCTTGCAGCCCTATGGTGGA+AGG + chr5_2:73139814-73139833 None:intergenic 60.0%
CCTTCCACCATAGGGCTGCA+AGG - chr5_2:73139811-73139830 Msa0787410:intron 60.0%
GAACCTTCAGCAAGCAGCCC+TGG + chr5_2:73140637-73140656 None:intergenic 60.0%
GACTCAGTAGCCGAAGGCGA+AGG - chr5_2:73140658-73140677 Msa0787410:intron 60.0%
CAAAACGGTGTGGGTGGGTG+GGG - chr5_2:73141136-73141155 Msa0787410:intron 60.0%
AAAACGGTGTGGGTGGGTGG+GGG - chr5_2:73141137-73141156 Msa0787410:intron 60.0%
CTGAGAGCAGCGGGAGTGGT+AGG + chr5_2:73138567-73138586 None:intergenic 65.0%
CTACCACTCCCGCTGCTCTC+AGG - chr5_2:73138565-73138584 Msa0787410:three_prime_UTR 65.0%
CTGAGAGCAGCGGGAGTGGT+AGG + chr5_2:73138567-73138586 None:intergenic 65.0%
CTACCACTCCCGCTGCTCTC+AGG - chr5_2:73138565-73138584 Msa0787410:three_prime_UTR 65.0%
CCTCGGGGCCAAGGTTCCGA+GGG + chr5_2:73140414-73140433 None:intergenic 70.0%
ACCTCGGGGCCAAGGTTCCG+AGG + chr5_2:73140415-73140434 None:intergenic 70.0%
CCTCGGGGCCAAGGTTCCGA+GGG + chr5_2:73140414-73140433 None:intergenic 70.0%
ACCTCGGGGCCAAGGTTCCG+AGG + chr5_2:73140415-73140434 None:intergenic 70.0%
CCCTCGGAACCTTGGCCCCG+AGG - chr5_2:73140411-73140430 Msa0787410:CDS 75.0%
CCCTCGGAACCTTGGCCCCG+AGG - chr5_2:73140411-73140430 Msa0787410:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 73138505 73142598 73138505 ID=Msa0787410;Name=Msa0787410
chr5_2 mRNA 73138505 73142598 73138505 ID=Msa0787410-mRNA-1;Parent=Msa0787410;Name=Msa0787410-mRNA-1;_AED=0.09;_eAED=0.09;_QI=47|1|1|1|1|1|8|361|377
chr5_2 exon 73138505 73138975 73138505 ID=Msa0787410-mRNA-1:exon:22315;Parent=Msa0787410-mRNA-1
chr5_2 exon 73139507 73139683 73139507 ID=Msa0787410-mRNA-1:exon:22314;Parent=Msa0787410-mRNA-1
chr5_2 exon 73140188 73140306 73140188 ID=Msa0787410-mRNA-1:exon:22313;Parent=Msa0787410-mRNA-1
chr5_2 exon 73140399 73140465 73140399 ID=Msa0787410-mRNA-1:exon:22312;Parent=Msa0787410-mRNA-1
chr5_2 exon 73141345 73141406 73141345 ID=Msa0787410-mRNA-1:exon:22311;Parent=Msa0787410-mRNA-1
chr5_2 exon 73141583 73141777 73141583 ID=Msa0787410-mRNA-1:exon:22310;Parent=Msa0787410-mRNA-1
chr5_2 exon 73141870 73142060 73141870 ID=Msa0787410-mRNA-1:exon:22309;Parent=Msa0787410-mRNA-1
chr5_2 exon 73142339 73142598 73142339 ID=Msa0787410-mRNA-1:exon:22308;Parent=Msa0787410-mRNA-1
chr5_2 five_prime_UTR 73142552 73142598 73142552 ID=Msa0787410-mRNA-1:five_prime_utr;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73142339 73142551 73142339 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73141870 73142060 73141870 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73141583 73141777 73141583 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73141345 73141406 73141345 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73140399 73140465 73140399 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73140188 73140306 73140188 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73139507 73139683 73139507 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 CDS 73138866 73138975 73138866 ID=Msa0787410-mRNA-1:cds;Parent=Msa0787410-mRNA-1
chr5_2 three_prime_UTR 73138505 73138865 73138505 ID=Msa0787410-mRNA-1:three_prime_utr;Parent=Msa0787410-mRNA-1
Gene Sequence

>Msa0787410

ATGGCAGCTACTCCTACCACTCCCGCTGCTCTCAGGTTTCTTCCTCCAAACCCCACAACCAGAAAAACATTCAACTTCTTCTCAATTCTAAAACCAAATTTCGTATCACTGCGTTCATTCTCTCATCCTTCATTATTTTCTCAATCTCATAAATACCCTCTTTCTCCCTGCAAATGTTCCTTCACTGCCCCTGTTTCCACCACAACTTACGAGTTTTCTGATAATGCTTCAGAGATGGAGTTAAGATTAAATATAGGAAACATGGATGTAAGAAGCACAAAAGACATATCGGTTGATGCAAACGATACATCTTTAACGATCAGAGTGTTGCAGTCAGGATCTCCCATTACGTTGATAGACACTAATCCTCTTTTTGACAGGATTAAACCCTCGGAAACAATATGGTATATAGATGATGATCATCTTGTGGTGAATTTCAAGAAAAACGATCCTGAGTTGAAATGGCCTGACATCATGGAATCATGGGAATCGCTCGCTGCTGGATCATCACAGCTTTTGAAAGGAACATCCATCTATCTTGTTGGTGATTCCACTGAAATCAACCAGAAAGTGGCTGAAGAGCTTGCTACTGGTCTGGGGTACACGCCACTAAGTACAAAAGAGTTGCTTGAAACTTATTCCAATCAAACCGTGGATTCATGGCTGCTTGCTGAAGGTTCTGACTCAGTAGCCGAAGGCGAAGGCACTGTACTTGAAAGCATAAGTAGTCATGTAAGGGCAGCAGTTGCAACATTAGGAGGTAAACATGGTGCTGCTGGAAGATCTGATAAATGGCGACATCTTTATGCAGGATTTACTGTCTGGTTGTCACAGACTGAAGCATCAGATGAAGATTCAGCAAGGGAGGAGACACACAGAAACGTCAAAGATCGCATAACTGCATATACGAATGCAGATGTGGTTGTGAAATTACAGGGATGGGATCCTGCTTATGCTAAAAGTGTGGCACAGGGATGTTTGAGTGCTCTAAAACAGTTAATCCTATCAGACAAGAAACTTCCAGGTAAAAAAAGCCTATACATAAGATTGGGATGTCGTGGTGATTGGCCAAACATCAAACCCCCTGGTTGGGATCCATCAAGTGAAGGTGGTGAAACTCTTGGCACACAATAA

Protein sequence

>Msa0787410

MAATPTTPAALRFLPPNPTTRKTFNFFSILKPNFVSLRSFSHPSLFSQSHKYPLSPCKCSFTAPVSTTTYEFSDNASEMELRLNIGNMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDTNPLFDRIKPSETIWYIDDDHLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLVGDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEGTVLESISSHVRAAVATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITAYTNADVVVKLQGWDPAYAKSVAQGCLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSSEGGETLGTQ*