AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411690 MtrunA17_Chr7g0244891 90.129 233 18 1 1 228 1 233 7.40e-139 388
Msa1411690 MtrunA17_Chr3g0121231 26.984 189 124 4 44 228 62 240 1.08e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411690 AT3G08740.1 68.559 229 69 3 2 228 9 236 2.69e-111 319
Msa1411690 AT4G26310.1 27.941 204 136 5 29 227 58 255 1.35e-19 84.7
Msa1411690 AT4G26310.2 27.624 181 120 5 29 204 58 232 1.44e-13 68.6

Find 67 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGTTCAATTTGTCTTCA+TGG 0.273598 tig0023826:+47559 Msa1411690:CDS
AGATTTGCGGAGAGAGAAAT+AGG 0.307200 tig0023826:-44575 None:intergenic
ACCTTAAGCTTGACTGTTAT+AGG 0.325039 tig0023826:-48605 None:intergenic
CGATGTGGATCCGGGACTTA+AGG 0.328589 tig0023826:+48631 Msa1411690:CDS
AAGCTTAAGAATCATCTTAC+TGG 0.330470 tig0023826:+44939 Msa1411690:CDS
GGTTCACCTTGGCGTGTCTT+AGG 0.336234 tig0023826:+44792 Msa1411690:CDS
TGGACTGCAATTTGCTGTTA+TGG 0.343872 tig0023826:+47870 Msa1411690:CDS
CTGAGAAAACGGGGATTAGA+AGG 0.346976 tig0023826:-44634 None:intergenic
CCTTAAGCTTGACTGTTATA+GGG 0.349152 tig0023826:-48604 None:intergenic
GCACCAGTGTCGAGAGTTGC+TGG 0.378675 tig0023826:-49190 None:intergenic
GGTTTCTAGTCTAGAGGATA+AGG 0.406130 tig0023826:-44479 None:intergenic
TCAATTTGTCTTCATGGACT+TGG 0.409456 tig0023826:+47565 Msa1411690:CDS
TAAGGTAGTCGATGTGGATC+CGG 0.417488 tig0023826:+48622 Msa1411690:CDS
AGGGGTGCGAATAGGAAAGT+TGG 0.419595 tig0023826:-44614 None:intergenic
CCCTATAACAGTCAAGCTTA+AGG 0.429085 tig0023826:+48604 Msa1411690:CDS
AAATATAGGCGAGGAAATAC+TGG 0.432665 tig0023826:+49237 Msa1411690:CDS
GGTACTAATATCGAAGTTGA+TGG 0.439639 tig0023826:+44771 Msa1411690:CDS
ATACTGGTTGATACAAGATC+TGG 0.444124 tig0023826:+49253 Msa1411690:CDS
CGTCTGGATGAATCAGAAGT+TGG 0.444955 tig0023826:+47818 Msa1411690:CDS
GGATTAGAAGGGGTGCGAAT+AGG 0.455811 tig0023826:-44622 None:intergenic
TCTAGTAATGACATTAAAGT+TGG 0.456626 tig0023826:+44750 Msa1411690:CDS
GATGTGGATCCGGGACTTAA+GGG 0.461872 tig0023826:+48632 Msa1411690:CDS
GACCTTCAGAGCTGGAAGTT+CGG 0.469297 tig0023826:+44977 Msa1411690:CDS
GTGGGGCTTACTGAGAAAAC+GGG 0.474683 tig0023826:-44644 None:intergenic
AGTGGGGCTTACTGAGAAAA+CGG 0.475773 tig0023826:-44645 None:intergenic
GTCCCGCTCTTTGTAAATAT+AGG 0.478856 tig0023826:+49223 Msa1411690:CDS
AAGGTAGTCGATGTGGATCC+GGG 0.490283 tig0023826:+48623 Msa1411690:CDS
GTCTGGATGAATCAGAAGTT+GGG 0.495506 tig0023826:+47819 Msa1411690:CDS
CTTCATGTGAAACCTGGAAA+AGG 0.505634 tig0023826:+44897 Msa1411690:CDS
CGCCTATATTTACAAAGAGC+GGG 0.509532 tig0023826:-49225 None:intergenic
TGCAATTTGCTGTTATGGAA+TGG 0.524366 tig0023826:+47875 Msa1411690:CDS
TACATACGAGGAGACTCGTC+TGG 0.525138 tig0023826:+47802 Msa1411690:CDS
ATAGGAGAGATTGAGCTTCA+AGG 0.529166 tig0023826:-44557 None:intergenic
GGTATGAAGAAGAAGATTTG+CGG 0.536049 tig0023826:-44588 None:intergenic
AAAACAAAGTGGCTGAAAGA+AGG 0.539823 tig0023826:+47845 Msa1411690:CDS
GAGTTTCTTCATGTGAAACC+TGG 0.542138 tig0023826:+44891 Msa1411690:intron
GTTTCTAGTCTAGAGGATAA+GGG 0.555035 tig0023826:-44478 None:intergenic
AAACAGTTCACATATAAAGA+TGG 0.561471 tig0023826:+47539 Msa1411690:CDS
TACCGAACTTCCAGCTCTGA+AGG 0.565488 tig0023826:-44979 None:intergenic
GTTGAAAAGACCTTCAGAGC+TGG 0.566337 tig0023826:+44969 Msa1411690:CDS
CGACAACACAACATGATAGC+GGG 0.571198 tig0023826:+44526 Msa1411690:exon
TGAGAAAACGGGGATTAGAA+GGG 0.572553 tig0023826:-44633 None:intergenic
AAAGTGGCTGAAAGAAGGAA+TGG 0.581341 tig0023826:+47850 Msa1411690:CDS
TCGCCTATATTTACAAAGAG+CGG 0.586804 tig0023826:-49226 None:intergenic
GGCATTATTCATCATGATTG+TGG 0.587553 tig0023826:+49470 Msa1411690:three_prime_UTR
GCTGTGTCACCCTTAAGTCC+CGG 0.588592 tig0023826:-48641 None:intergenic
TACTGGTTGATACAAGATCT+GGG 0.592937 tig0023826:+49254 Msa1411690:CDS
TTGATATGAAATCTTAAGCA+CGG 0.595292 tig0023826:-49288 None:intergenic
GGTGCGAATAGGAAAGTTGG+AGG 0.597541 tig0023826:-44611 None:intergenic
TGCGAATAGGAAAGTTGGAG+GGG 0.600775 tig0023826:-44609 None:intergenic
AAGCCAGCAACTCTCGACAC+TGG 0.613570 tig0023826:+49187 Msa1411690:CDS
TAACTTTAGTTGCGAAACTG+AGG 0.615321 tig0023826:+49440 Msa1411690:three_prime_UTR
GTGCGAATAGGAAAGTTGGA+GGG 0.615958 tig0023826:-44610 None:intergenic
ATCATGATGAATAATGCCGC+AGG 0.616116 tig0023826:-49465 None:intergenic
TGATGAAGCTGATATAGTCA+AGG 0.622649 tig0023826:+47511 Msa1411690:CDS
CAAGCTTAAGGTAGTCGATG+TGG 0.633779 tig0023826:+48616 Msa1411690:CDS
TTGCGAAACTGAGGCTCCTG+CGG 0.644437 tig0023826:+49449 Msa1411690:three_prime_UTR
GAGAAAACGGGGATTAGAAG+GGG 0.646810 tig0023826:-44632 None:intergenic
GTATTACCTAAGACACGCCA+AGG 0.651100 tig0023826:-44798 None:intergenic
TCGAAGTTGATGGTTCACCT+TGG 0.655283 tig0023826:+44781 Msa1411690:CDS
GAAAAGGTGCTGCATTTGTG+AGG 0.657241 tig0023826:+44913 Msa1411690:CDS
CTTAAGGGTGACACAGCCCA+AGG 0.664333 tig0023826:+48647 Msa1411690:CDS
ACGACAACACAACATGATAG+CGG 0.677593 tig0023826:+44525 Msa1411690:exon
GCTCTTTGTAAATATAGGCG+AGG 0.683752 tig0023826:+49228 Msa1411690:CDS
AAGTTGGGAACAAAACAAAG+TGG 0.698694 tig0023826:+47834 Msa1411690:CDS
ATACTATCAGAGTACATACG+AGG 0.738653 tig0023826:+47790 Msa1411690:intron
TGGGGCTTACTGAGAAAACG+GGG 0.761195 tig0023826:-44643 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTAGATTCTTTT+TGG + tig0023826:45253-45272 Msa1411690:intron 10.0%
!!! ATTTTTATTAGATTCTTTTT+GGG + tig0023826:45254-45273 Msa1411690:intron 10.0%
!!! ATTTTGAATTAAATTGATTT+AGG + tig0023826:45483-45502 Msa1411690:intron 10.0%
!!! TTTTGAATTAAATTGATTTA+GGG + tig0023826:45484-45503 Msa1411690:intron 10.0%
!! AATTAGATTATGTATAATTA+AGG - tig0023826:47611-47630 None:intergenic 10.0%
!! TAACAAAGTAAAAAATTAAA+GGG - tig0023826:47765-47784 None:intergenic 10.0%
!! TTAACAAAGTAAAAAATTAA+AGG - tig0023826:47766-47785 None:intergenic 10.0%
!! TTAGTAAAATAAAAAACTAT+GGG - tig0023826:48160-48179 None:intergenic 10.0%
!! ATTAGTAAAATAAAAAACTA+TGG - tig0023826:48161-48180 None:intergenic 10.0%
!! ATAAATATAAAAGCTAAAAA+AGG + tig0023826:48885-48904 Msa1411690:intron 10.0%
!! CTTAGTAGAAAAAAAAAAAA+GGG - tig0023826:45329-45348 None:intergenic 15.0%
!! TCTTAGTAGAAAAAAAAAAA+AGG - tig0023826:45330-45349 None:intergenic 15.0%
!!! TTACAAAACAGTAATTTTTT+AGG - tig0023826:47185-47204 None:intergenic 15.0%
!! TAATAAATTATGAGATGAAA+AGG - tig0023826:47909-47928 None:intergenic 15.0%
!! AAATAAAATTACAACAAGAA+CGG - tig0023826:48463-48482 None:intergenic 15.0%
!! TTAAACATAAAATTTAAGGA+TGG + tig0023826:48482-48501 Msa1411690:intron 15.0%
!!! AATTTTATTTAAGCTTCAAT+AGG - tig0023826:48537-48556 None:intergenic 15.0%
!! AAAAGATTTCAGAAAAACTA+GGG - tig0023826:45010-45029 None:intergenic 20.0%
!! AAAAAGATTTCAGAAAAACT+AGG - tig0023826:45011-45030 None:intergenic 20.0%
!!! ATAGAAAATAATCTTTTTGC+TGG + tig0023826:45663-45682 Msa1411690:intron 20.0%
!! TCTAAAAAATTTAGCTATGT+CGG - tig0023826:46552-46571 None:intergenic 20.0%
!! TTCAATGTAATTATATGTGT+CGG + tig0023826:46583-46602 Msa1411690:intron 20.0%
!! CATCATTTCTTGAAAAATAT+AGG + tig0023826:46711-46730 Msa1411690:intron 20.0%
!! ATATAGGATACAATATGTTT+AGG + tig0023826:46727-46746 Msa1411690:intron 20.0%
!! CAATTAATAAGTAGGAATAA+GGG + tig0023826:46864-46883 Msa1411690:intron 20.0%
!! AAGTAAAAAATTAAAGGGTA+TGG - tig0023826:47760-47779 None:intergenic 20.0%
!! ATATTCATTATCATCAATAC+TGG - tig0023826:47967-47986 None:intergenic 20.0%
!!! AGTATTGATGATAATGAATA+TGG + tig0023826:47966-47985 Msa1411690:intron 20.0%
!!! GTATTGATGATAATGAATAT+GGG + tig0023826:47967-47986 Msa1411690:intron 20.0%
!! TGTATTCTTGTAATAGTTAA+TGG + tig0023826:48336-48355 Msa1411690:intron 20.0%
!! AAATTAGCAGTATAAGAAAA+TGG - tig0023826:48678-48697 None:intergenic 20.0%
!! ACTAAAATGATAAAGTTATC+TGG + tig0023826:48763-48782 Msa1411690:intron 20.0%
!! AATTGTGAAATATGCATTTA+GGG - tig0023826:48800-48819 None:intergenic 20.0%
!! AAATTGTGAAATATGCATTT+AGG - tig0023826:48801-48820 None:intergenic 20.0%
!! TAAATGCATATTTCACAATT+TGG + tig0023826:48800-48819 Msa1411690:intron 20.0%
!! AATTTGGCATTAAAAAAACA+AGG + tig0023826:48816-48835 Msa1411690:intron 20.0%
!! ATTTGGCATTAAAAAAACAA+GGG + tig0023826:48817-48836 Msa1411690:intron 20.0%
! TCTAGTAATGACATTAAAGT+TGG + tig0023826:44750-44769 Msa1411690:CDS 25.0%
! ATATTCCTTCTTACAAATCA+TGG - tig0023826:45176-45195 None:intergenic 25.0%
! GAATTTACTATGAAATTGCT+TGG + tig0023826:45196-45215 Msa1411690:intron 25.0%
!! TGAAGTCAATTTGATGATTA+AGG + tig0023826:45229-45248 Msa1411690:intron 25.0%
!!! ATTAGATTCTTTTTGGGAAT+AGG + tig0023826:45260-45279 Msa1411690:intron 25.0%
!!! TTAGATTCTTTTTGGGAATA+GGG + tig0023826:45261-45280 Msa1411690:intron 25.0%
! CTGGTATTTATATAGCAAAA+AGG - tig0023826:45580-45599 None:intergenic 25.0%
!!! TAGTTTTTTACAAAGCAAGA+GGG - tig0023826:45643-45662 None:intergenic 25.0%
!!! TTAGTTTTTTACAAAGCAAG+AGG - tig0023826:45644-45663 None:intergenic 25.0%
!! AAAATAATCTTTTTGCTGGT+GGG + tig0023826:45667-45686 Msa1411690:intron 25.0%
!! TTAGTGAAAATAGAGGTTTT+TGG - tig0023826:45927-45946 None:intergenic 25.0%
!! TCATCTTTTAGTGAAAATAG+AGG - tig0023826:45934-45953 None:intergenic 25.0%
!! TTAGCAAGCTTTAGTAATAT+AGG + tig0023826:46130-46149 Msa1411690:intron 25.0%
!! AATTCTAATTTGTGAATGTG+TGG - tig0023826:46170-46189 None:intergenic 25.0%
! CATCATACTTGTATAACAAA+CGG - tig0023826:46382-46401 None:intergenic 25.0%
! AAGTGATGAAAGTTTGAATA+TGG + tig0023826:46802-46821 Msa1411690:intron 25.0%
! AGTGATGAAAGTTTGAATAT+GGG + tig0023826:46803-46822 Msa1411690:intron 25.0%
! GCAATTAATAAGTAGGAATA+AGG + tig0023826:46863-46882 Msa1411690:intron 25.0%
! ATTTGTCACAATTAATGAGT+GGG + tig0023826:46926-46945 Msa1411690:intron 25.0%
! TTCAACATAAATTATGTACC+TGG + tig0023826:46959-46978 Msa1411690:intron 25.0%
! TCAACATAAATTATGTACCT+GGG + tig0023826:46960-46979 Msa1411690:intron 25.0%
! TCAAAAAGACAAATTCTTTC+GGG - tig0023826:47229-47248 None:intergenic 25.0%
! CTCAAAAAGACAAATTCTTT+CGG - tig0023826:47230-47249 None:intergenic 25.0%
!!! AAGAGTTTTTAGTGATGTTA+TGG + tig0023826:47368-47387 Msa1411690:intron 25.0%
!! TGTTGCTTCTAATTTCTTAT+TGG + tig0023826:47437-47456 Msa1411690:intron 25.0%
! GTTGCTTCTAATTTCTTATT+GGG + tig0023826:47438-47457 Msa1411690:intron 25.0%
! AAACAGTTCACATATAAAGA+TGG + tig0023826:47539-47558 Msa1411690:CDS 25.0%
! AATTGTTGGAATAGAGAATT+TGG - tig0023826:47723-47742 None:intergenic 25.0%
! ATTGTTATACGAGTAAATCA+GGG + tig0023826:48047-48066 Msa1411690:intron 25.0%
!! AACTATGAATCAATGCTTTT+GGG - tig0023826:48100-48119 None:intergenic 25.0%
!! TACTAATCTGAAATGTTGAA+TGG + tig0023826:48174-48193 Msa1411690:intron 25.0%
!!! ACAGTTTTATATACATGCTT+TGG + tig0023826:48198-48217 Msa1411690:intron 25.0%
!!! CAGTTTTATATACATGCTTT+GGG + tig0023826:48199-48218 Msa1411690:intron 25.0%
!!! AGTTTTATATACATGCTTTG+GGG + tig0023826:48200-48219 Msa1411690:intron 25.0%
!! ACTTGTCTGTTTATATTTTC+AGG + tig0023826:48565-48584 Msa1411690:intron 25.0%
!!! AGGTTTTATCAGCTAATAAT+TGG + tig0023826:48858-48877 Msa1411690:intron 25.0%
! TGACATTCAATATATCTAAG+AGG - tig0023826:49024-49043 None:intergenic 25.0%
! TTGATATGAAATCTTAAGCA+CGG - tig0023826:49291-49310 None:intergenic 25.0%
!!! AATTTTTTTGCAGTCTTCAA+TGG + tig0023826:49518-49537 Msa1411690:three_prime_UTR 25.0%
!! AAAAATGGTTTCTAGTCTAG+AGG - tig0023826:44488-44507 None:intergenic 30.0%
! GTTTTCTTACTGCAGAAAAA+TGG - tig0023826:44503-44522 None:intergenic 30.0%
TTAGTGAAAAGATGAAAGTG+GGG - tig0023826:44664-44683 None:intergenic 30.0%
GTTAGTGAAAAGATGAAAGT+GGG - tig0023826:44665-44684 None:intergenic 30.0%
GAGATTAGTGGAATTAAGAA+GGG - tig0023826:44702-44721 None:intergenic 30.0%
AGAGATTAGTGGAATTAAGA+AGG - tig0023826:44703-44722 None:intergenic 30.0%
GAAAACAACAAAGAGATTAG+TGG - tig0023826:44714-44733 None:intergenic 30.0%
AAGCTTAAGAATCATCTTAC+TGG + tig0023826:44939-44958 Msa1411690:CDS 30.0%
! TTCTTTTTACTGTGTTGCAT+TGG + tig0023826:45029-45048 Msa1411690:intron 30.0%
GAATGTTAAGAATCTCACAT+CGG + tig0023826:45068-45087 Msa1411690:intron 30.0%
AGTCTGACAATGTTTATAAG+TGG + tig0023826:45100-45119 Msa1411690:intron 30.0%
GTCTGACAATGTTTATAAGT+GGG + tig0023826:45101-45120 Msa1411690:intron 30.0%
!! TAGATTCTTTTTGGGAATAG+GGG + tig0023826:45262-45281 Msa1411690:intron 30.0%
GAAAAAACATGATTGAGTGT+CGG + tig0023826:45352-45371 Msa1411690:intron 30.0%
! TATTATTCAATTGCGGATTG+TGG + tig0023826:45375-45394 Msa1411690:intron 30.0%
ACACTATAGGATAGCAAAAT+TGG - tig0023826:45417-45436 None:intergenic 30.0%
!!! CCTCTCTCAAAGTTTTATTT+AGG - tig0023826:45531-45550 None:intergenic 30.0%
! CCTAAATAAAACTTTGAGAG+AGG + tig0023826:45528-45547 Msa1411690:intron 30.0%
! AATAAAACTTTGAGAGAGGT+TGG + tig0023826:45532-45551 Msa1411690:intron 30.0%
! GAAAATAATCTTTTTGCTGG+TGG + tig0023826:45666-45685 Msa1411690:intron 30.0%
AGGTGAAATGGTTTATGTTT+GGG + tig0023826:45752-45771 Msa1411690:intron 30.0%
! GTTAATTTTCTGACTCAATG+TGG + tig0023826:45813-45832 Msa1411690:intron 30.0%
GACAAGGAAATCTAAATGTT+TGG - tig0023826:46029-46048 None:intergenic 30.0%
TGAAAAACGAAGTATAACAC+AGG - tig0023826:46066-46085 None:intergenic 30.0%
! TTAGTAATATAGGTGTCACA+TGG + tig0023826:46140-46159 Msa1411690:intron 30.0%
TAGAATGGAAACAGATTGTT+GGG + tig0023826:46321-46340 Msa1411690:intron 30.0%
AAGTATGATGCAACATAGTT+TGG + tig0023826:46392-46411 Msa1411690:intron 30.0%
GTGTACTTGCATTATAGTTT+AGG - tig0023826:46450-46469 None:intergenic 30.0%
GATGATATAAATTGCATCTG+TGG + tig0023826:46841-46860 Msa1411690:intron 30.0%
ATCTGTGGCAATTAATAAGT+AGG + tig0023826:46856-46875 Msa1411690:intron 30.0%
CATTTGTCACAATTAATGAG+TGG + tig0023826:46925-46944 Msa1411690:intron 30.0%
!!! CATCTGACTCTTCTTTTTTA+TGG - tig0023826:47000-47019 None:intergenic 30.0%
AAAAAGACAAATTCTTTCGG+GGG - tig0023826:47227-47246 None:intergenic 30.0%
CAAAAAGACAAATTCTTTCG+GGG - tig0023826:47228-47247 None:intergenic 30.0%
! CGAAAGAATTTGTCTTTTTG+AGG + tig0023826:47228-47247 Msa1411690:intron 30.0%
ATCTAACTCATTTATGTGAG+TGG + tig0023826:47344-47363 Msa1411690:intron 30.0%
AGACAAGATAACAACAGAAA+AGG - tig0023826:47469-47488 None:intergenic 30.0%
GTAACTTCTCATTATGATCA+AGG - tig0023826:47682-47701 None:intergenic 30.0%
! AGTTACTAGTTAGCCTAATT+AGG + tig0023826:47696-47715 Msa1411690:intron 30.0%
TAGAGAATTTGGACCTAATT+AGG - tig0023826:47712-47731 None:intergenic 30.0%
ACTGAAAGCAAAAGAATTGT+TGG - tig0023826:47737-47756 None:intergenic 30.0%
CCTAGAAAATAAAGGTTTGA+GGG - tig0023826:47944-47963 None:intergenic 30.0%
! AATACTGGCCTAGAAAATAA+AGG - tig0023826:47952-47971 None:intergenic 30.0%
GATTGTTATACGAGTAAATC+AGG + tig0023826:48046-48065 Msa1411690:intron 30.0%
TTGTTATACGAGTAAATCAG+GGG + tig0023826:48048-48067 Msa1411690:intron 30.0%
! CAACTATGAATCAATGCTTT+TGG - tig0023826:48101-48120 None:intergenic 30.0%
TAAAACACCATTTGGGAAAA+AGG - tig0023826:48263-48282 None:intergenic 30.0%
GATACAGCATTAATCACTTA+AGG - tig0023826:48441-48460 None:intergenic 30.0%
! GAACTTTTGTGATTCTATAC+AGG - tig0023826:48735-48754 None:intergenic 30.0%
ATATTGAATGTCAAGAGAGT+AGG + tig0023826:49031-49050 Msa1411690:intron 30.0%
TGTAAATGGAATATGATTGC+AGG + tig0023826:49154-49173 Msa1411690:intron 30.0%
ACTGCAAAAAAATTATGACG+AGG - tig0023826:49512-49531 None:intergenic 30.0%
!! GTTTCTAGTCTAGAGGATAA+GGG - tig0023826:44481-44500 None:intergenic 35.0%
GGTATGAAGAAGAAGATTTG+CGG - tig0023826:44591-44610 None:intergenic 35.0%
GGTTAGTGAAAAGATGAAAG+TGG - tig0023826:44666-44685 None:intergenic 35.0%
ATTAGTGGAATTAAGAAGGG+TGG - tig0023826:44699-44718 None:intergenic 35.0%
GGTACTAATATCGAAGTTGA+TGG + tig0023826:44771-44790 Msa1411690:CDS 35.0%
! CATTGGTTACTAGTAGATGA+AGG + tig0023826:45046-45065 Msa1411690:intron 35.0%
TTAAGAATCTCACATCGGAT+AGG + tig0023826:45073-45092 Msa1411690:intron 35.0%
CCTTCTTACAAATCATGGTT+GGG - tig0023826:45171-45190 None:intergenic 35.0%
TCCTTCTTACAAATCATGGT+TGG - tig0023826:45172-45191 None:intergenic 35.0%
! GTGTCGGTATTATTCAATTG+CGG + tig0023826:45368-45387 Msa1411690:intron 35.0%
TCACCAATGTTGTCAAATAG+CGG - tig0023826:45447-45466 None:intergenic 35.0%
AAATACCAGTGTGTGCTTTA+AGG + tig0023826:45591-45610 Msa1411690:intron 35.0%
TTTAGTTGCGATTGAGTTTG+AGG + tig0023826:45732-45751 Msa1411690:intron 35.0%
GAGGTGAAATGGTTTATGTT+TGG + tig0023826:45751-45770 Msa1411690:intron 35.0%
!! TAGAGGTTTTTGGATATCGT+CGG - tig0023826:45917-45936 None:intergenic 35.0%
AGGTTTCATTTCATGGTTGA+AGG - tig0023826:45981-46000 None:intergenic 35.0%
TGCTACCACCATAAAAAAAG+GGG - tig0023826:46105-46124 None:intergenic 35.0%
GTGCTACCACCATAAAAAAA+GGG - tig0023826:46106-46125 None:intergenic 35.0%
AGTGCTACCACCATAAAAAA+AGG - tig0023826:46107-46126 None:intergenic 35.0%
TTACCTGTTCATATTCACTC+TGG + tig0023826:46190-46209 Msa1411690:intron 35.0%
CATTCTACCTCCACAAATTA+GGG - tig0023826:46308-46327 None:intergenic 35.0%
GTAGAATGGAAACAGATTGT+TGG + tig0023826:46320-46339 Msa1411690:intron 35.0%
TATGATGCAACATAGTTTGG+AGG + tig0023826:46395-46414 Msa1411690:intron 35.0%
CAGATACTATCTATGAAGCA+CGG + tig0023826:46481-46500 Msa1411690:intron 35.0%
GTATAGTATCCTATGAAGCA+CGG - tig0023826:46673-46692 None:intergenic 35.0%
! GAAATGATGTGTCGTTGTAT+TGG - tig0023826:46700-46719 None:intergenic 35.0%
ATATGGGAGGATAAATGAAC+TGG + tig0023826:47147-47166 Msa1411690:intron 35.0%
AAAAGACAAATTCTTTCGGG+GGG - tig0023826:47226-47245 None:intergenic 35.0%
TAGCAATCCACAAGAAAACA+GGG - tig0023826:47319-47338 None:intergenic 35.0%
TTAGCAATCCACAAGAAAAC+AGG - tig0023826:47320-47339 None:intergenic 35.0%
AGCTTCATCAATCTGTCAAA+AGG - tig0023826:47501-47520 None:intergenic 35.0%
TGATGAAGCTGATATAGTCA+AGG + tig0023826:47511-47530 Msa1411690:CDS 35.0%
TGGTGTTCAATTTGTCTTCA+TGG + tig0023826:47559-47578 Msa1411690:CDS 35.0%
TCAATTTGTCTTCATGGACT+TGG + tig0023826:47565-47584 Msa1411690:CDS 35.0%
CATTATGATCAAGGACTGAT+AGG - tig0023826:47673-47692 None:intergenic 35.0%
ATACTATCAGAGTACATACG+AGG + tig0023826:47790-47809 Msa1411690:intron 35.0%
AAGTTGGGAACAAAACAAAG+TGG + tig0023826:47834-47853 Msa1411690:CDS 35.0%
AAAACAAAGTGGCTGAAAGA+AGG + tig0023826:47845-47864 Msa1411690:CDS 35.0%
!! TGCAATTTGCTGTTATGGAA+TGG + tig0023826:47875-47894 Msa1411690:CDS 35.0%
!!! CCCTCAAACCTTTATTTTCT+AGG + tig0023826:47941-47960 Msa1411690:intron 35.0%
GCCTAGAAAATAAAGGTTTG+AGG - tig0023826:47945-47964 None:intergenic 35.0%
! GAGTATTCCTTTTTCCCAAA+TGG + tig0023826:48253-48272 Msa1411690:intron 35.0%
GCACTAGTAAAACACCATTT+GGG - tig0023826:48270-48289 None:intergenic 35.0%
AGCACTAGTAAAACACCATT+TGG - tig0023826:48271-48290 None:intergenic 35.0%
!! TCAAAGCATTGACAAGTACA+AGG + tig0023826:48313-48332 Msa1411690:intron 35.0%
CCTTAAGCTTGACTGTTATA+GGG - tig0023826:48607-48626 None:intergenic 35.0%
ACCTTAAGCTTGACTGTTAT+AGG - tig0023826:48608-48627 None:intergenic 35.0%
TAAGAAAATGGCATCACCTT+GGG - tig0023826:48666-48685 None:intergenic 35.0%
ATAAGAAAATGGCATCACCT+TGG - tig0023826:48667-48686 None:intergenic 35.0%
TTTGTGATTCTATACAGGAC+TGG - tig0023826:48730-48749 None:intergenic 35.0%
AAGCTAAAAAAGGACAACCT+AGG + tig0023826:48895-48914 Msa1411690:intron 35.0%
AGCTAAAAAAGGACAACCTA+GGG + tig0023826:48896-48915 Msa1411690:intron 35.0%
CAAGGTAAAGTTACCAACAA+TGG - tig0023826:48977-48996 None:intergenic 35.0%
! GGGCAATAAAAAAGCACAAT+AGG - tig0023826:49105-49124 None:intergenic 35.0%
CTTGCAGAACTAACTGTAAA+TGG + tig0023826:49140-49159 Msa1411690:intron 35.0%
AAATGGAATATGATTGCAGG+TGG + tig0023826:49157-49176 Msa1411690:intron 35.0%
TCGCCTATATTTACAAAGAG+CGG - tig0023826:49229-49248 None:intergenic 35.0%
AAATATAGGCGAGGAAATAC+TGG + tig0023826:49237-49256 Msa1411690:CDS 35.0%
! ATACTGGTTGATACAAGATC+TGG + tig0023826:49253-49272 Msa1411690:CDS 35.0%
! TACTGGTTGATACAAGATCT+GGG + tig0023826:49254-49273 Msa1411690:CDS 35.0%
TAACTTTAGTTGCGAAACTG+AGG + tig0023826:49440-49459 Msa1411690:three_prime_UTR 35.0%
GGCATTATTCATCATGATTG+TGG + tig0023826:49470-49489 Msa1411690:three_prime_UTR 35.0%
!! GGTTTCTAGTCTAGAGGATA+AGG - tig0023826:44482-44501 None:intergenic 40.0%
ACGACAACACAACATGATAG+CGG + tig0023826:44525-44544 Msa1411690:exon 40.0%
ATAGGAGAGATTGAGCTTCA+AGG - tig0023826:44560-44579 None:intergenic 40.0%
AGATTTGCGGAGAGAGAAAT+AGG - tig0023826:44578-44597 None:intergenic 40.0%
TGAGAAAACGGGGATTAGAA+GGG - tig0023826:44636-44655 None:intergenic 40.0%
GAGTTTCTTCATGTGAAACC+TGG + tig0023826:44891-44910 Msa1411690:intron 40.0%
CTTCATGTGAAACCTGGAAA+AGG + tig0023826:44897-44916 Msa1411690:CDS 40.0%
!!! AACTCACAAGCCGGTTTTTT+GGG + tig0023826:45134-45153 Msa1411690:intron 40.0%
CTAACACAACCCCAAAAAAC+CGG - tig0023826:45147-45166 None:intergenic 40.0%
! CCCAACCATGATTTGTAAGA+AGG + tig0023826:45168-45187 Msa1411690:intron 40.0%
!! TTTTTGGGAATAGGGGTAGA+GGG + tig0023826:45269-45288 Msa1411690:intron 40.0%
! CAATTGCGGATTGTGGAAAA+TGG + tig0023826:45382-45401 Msa1411690:intron 40.0%
TAGCGGCACTAAAACACTAT+AGG - tig0023826:45430-45449 None:intergenic 40.0%
CATTGGTGAGCGTTTGATAA+AGG + tig0023826:45458-45477 Msa1411690:intron 40.0%
GCAGTAAAAGCCCTTACTTT+AGG - tig0023826:45693-45712 None:intergenic 40.0%
! AAAGTAAGGGCTTTTACTGC+TGG + tig0023826:45693-45712 Msa1411690:intron 40.0%
! AAGTAAGGGCTTTTACTGCT+GGG + tig0023826:45694-45713 Msa1411690:intron 40.0%
! CGATTGAGTTTGAGGTGAAA+TGG + tig0023826:45740-45759 Msa1411690:intron 40.0%
!! AGAGGTTTTTGGATATCGTC+GGG - tig0023826:45916-45935 None:intergenic 40.0%
GTGTGTCAGGTTTCATTTCA+TGG - tig0023826:45988-46007 None:intergenic 40.0%
ATGAAACCTGACACACATTG+AGG + tig0023826:45992-46011 Msa1411690:intron 40.0%
! AATTAGCCTCAATGTGTGTC+AGG - tig0023826:46001-46020 None:intergenic 40.0%
TGACACACATTGAGGCTAAT+TGG + tig0023826:46000-46019 Msa1411690:intron 40.0%
!! TTCGTTTTTCATCTCGCAAC+CGG + tig0023826:46075-46094 Msa1411690:intron 40.0%
CCATAAAAAAAGGGGGTTTC+CGG - tig0023826:46097-46116 None:intergenic 40.0%
!!! GAAACCCCCTTTTTTTATGG+TGG + tig0023826:46097-46116 Msa1411690:intron 40.0%
GCTACCACCATAAAAAAAGG+GGG - tig0023826:46104-46123 None:intergenic 40.0%
TCTCCAGAGTGAATATGAAC+AGG - tig0023826:46196-46215 None:intergenic 40.0%
TTGCATCATACCTACCTTCA+TGG + tig0023826:46265-46284 Msa1411690:intron 40.0%
TGCATCATACCTACCTTCAT+GGG + tig0023826:46266-46285 Msa1411690:intron 40.0%
CCATTCTACCTCCACAAATT+AGG - tig0023826:46309-46328 None:intergenic 40.0%
! CCTAATTTGTGGAGGTAGAA+TGG + tig0023826:46306-46325 Msa1411690:intron 40.0%
CTCACCAGCAAATCTCAATT+AGG - tig0023826:46347-46366 None:intergenic 40.0%
!! AATTGAGATTTGCTGGTGAG+TGG + tig0023826:46347-46366 Msa1411690:intron 40.0%
CTATCTATGAAGCACGGATA+CGG + tig0023826:46487-46506 Msa1411690:intron 40.0%
ATTTAGCTATGTCGGCGTAT+CGG - tig0023826:46544-46563 None:intergenic 40.0%
TAAGGGAATTATGAGCTGAG+TGG + tig0023826:46881-46900 Msa1411690:intron 40.0%
AAGGGAATTATGAGCTGAGT+GGG + tig0023826:46882-46901 Msa1411690:intron 40.0%
! TGGCTTCACATTTTATTCCC+AGG - tig0023826:46980-46999 None:intergenic 40.0%
!! ATGTATTGACTGCATGCCAA+AGG + tig0023826:47017-47036 Msa1411690:intron 40.0%
ATACAGCATCAACATGCCTT+TGG - tig0023826:47036-47055 None:intergenic 40.0%
AGAACACATCGAGTACGATA+TGG + tig0023826:47130-47149 Msa1411690:intron 40.0%
GAACACATCGAGTACGATAT+GGG + tig0023826:47131-47150 Msa1411690:intron 40.0%
! AAAACCACCCTGTTTTCTTG+TGG + tig0023826:47309-47328 Msa1411690:intron 40.0%
! TTCATGGACTTGGTATCATC+TGG + tig0023826:47575-47594 Msa1411690:intron 40.0%
ACTTGGTATCATCTGGAAAC+TGG + tig0023826:47582-47601 Msa1411690:intron 40.0%
GTCTGGATGAATCAGAAGTT+GGG + tig0023826:47819-47838 Msa1411690:CDS 40.0%
AAAGTGGCTGAAAGAAGGAA+TGG + tig0023826:47850-47869 Msa1411690:CDS 40.0%
!! TGGACTGCAATTTGCTGTTA+TGG + tig0023826:47870-47889 Msa1411690:CDS 40.0%
CCCTATAACAGTCAAGCTTA+AGG + tig0023826:48604-48623 Msa1411690:CDS 40.0%
! CAGTGGATTTGTCTCTTTCT+TGG - tig0023826:48949-48968 None:intergenic 40.0%
GTTAGACTCTTACAAACGCA+AGG - tig0023826:48995-49014 None:intergenic 40.0%
GAATGTCAAGAGAGTAGGAT+CGG + tig0023826:49036-49055 Msa1411690:intron 40.0%
GCAAGTGAATGCAAGACAAA+GGG - tig0023826:49125-49144 None:intergenic 40.0%
TGCAAGTGAATGCAAGACAA+AGG - tig0023826:49126-49145 None:intergenic 40.0%
GTCCCGCTCTTTGTAAATAT+AGG + tig0023826:49223-49242 Msa1411690:CDS 40.0%
CGCCTATATTTACAAAGAGC+GGG - tig0023826:49228-49247 None:intergenic 40.0%
GCTCTTTGTAAATATAGGCG+AGG + tig0023826:49228-49247 Msa1411690:CDS 40.0%
ATCATGATGAATAATGCCGC+AGG - tig0023826:49468-49487 None:intergenic 40.0%
CGACAACACAACATGATAGC+GGG + tig0023826:44526-44545 Msa1411690:exon 45.0%
TGCGAATAGGAAAGTTGGAG+GGG - tig0023826:44612-44631 None:intergenic 45.0%
GTGCGAATAGGAAAGTTGGA+GGG - tig0023826:44613-44632 None:intergenic 45.0%
GAGAAAACGGGGATTAGAAG+GGG - tig0023826:44635-44654 None:intergenic 45.0%
CTGAGAAAACGGGGATTAGA+AGG - tig0023826:44637-44656 None:intergenic 45.0%
AGTGGGGCTTACTGAGAAAA+CGG - tig0023826:44648-44667 None:intergenic 45.0%
AAGAAGGGTGGTTAGAGAAG+AGG - tig0023826:44687-44706 None:intergenic 45.0%
!! TCGAAGTTGATGGTTCACCT+TGG + tig0023826:44781-44800 Msa1411690:CDS 45.0%
GTATTACCTAAGACACGCCA+AGG - tig0023826:44801-44820 None:intergenic 45.0%
! ACAAATGCAGCACCTTTTCC+AGG - tig0023826:44912-44931 None:intergenic 45.0%
!! GAAAAGGTGCTGCATTTGTG+AGG + tig0023826:44913-44932 Msa1411690:CDS 45.0%
GTTGAAAAGACCTTCAGAGC+TGG + tig0023826:44969-44988 Msa1411690:CDS 45.0%
!! AAAAACCGGCTTGTGAGTTG+AGG - tig0023826:45133-45152 None:intergenic 45.0%
!!! CAACTCACAAGCCGGTTTTT+TGG + tig0023826:45133-45152 Msa1411690:intron 45.0%
!!! ACTCACAAGCCGGTTTTTTG+GGG + tig0023826:45135-45154 Msa1411690:intron 45.0%
!!! CGGTTTTTTGGGGTTGTGTT+AGG + tig0023826:45145-45164 Msa1411690:intron 45.0%
!! CTTTTTGGGAATAGGGGTAG+AGG + tig0023826:45268-45287 Msa1411690:intron 45.0%
! TTGCGGATTGTGGAAAATGG+AGG + tig0023826:45385-45404 Msa1411690:intron 45.0%
! GTGCCGCTATTTGACAACAT+TGG + tig0023826:45441-45460 Msa1411690:intron 45.0%
GGTCACACATGTTAGCGAAA+AGG - tig0023826:45559-45578 None:intergenic 45.0%
!! ACCAGTGTGTGCTTTAAGGT+TGG + tig0023826:45595-45614 Msa1411690:intron 45.0%
!! CCAGTGTGTGCTTTAAGGTT+GGG + tig0023826:45596-45615 Msa1411690:intron 45.0%
GGTCACACATTCTGGCAAAA+AGG - tig0023826:45622-45641 None:intergenic 45.0%
ATAGTCAAACTGAGCGCCTA+AGG + tig0023826:45876-45895 Msa1411690:intron 45.0%
!! GGCAAAGTGGATTTTGCCTT+AGG - tig0023826:45895-45914 None:intergenic 45.0%
GGTTGAACAAGCAACTGACA+AGG - tig0023826:46045-46064 None:intergenic 45.0%
!!! CCGGAAACCCCCTTTTTTTA+TGG + tig0023826:46094-46113 Msa1411690:intron 45.0%
CTACCTCCACAAATTAGGGT+GGG - tig0023826:46304-46323 None:intergenic 45.0%
TCTACCTCCACAAATTAGGG+TGG - tig0023826:46305-46324 None:intergenic 45.0%
TGGGCCTAATTGAGATTTGC+TGG + tig0023826:46340-46359 Msa1411690:intron 45.0%
ATGAAGCACGGATACGGATA+CGG + tig0023826:46493-46512 Msa1411690:intron 45.0%
!! TATATGTGTCGGTGTCGTAC+CGG + tig0023826:46594-46613 Msa1411690:intron 45.0%
ATGTGTTCTGATACGCTGAC+AGG - tig0023826:47119-47138 None:intergenic 45.0%
CAATCCACAAGAAAACAGGG+TGG - tig0023826:47316-47335 None:intergenic 45.0%
CGTCTGGATGAATCAGAAGT+TGG + tig0023826:47818-47837 Msa1411690:CDS 45.0%
!! TTGCGTATGCATAGCTTGCT+AGG + tig0023826:48406-48425 Msa1411690:intron 45.0%
CAAGCTTAAGGTAGTCGATG+TGG + tig0023826:48616-48635 Msa1411690:CDS 45.0%
TAAGGTAGTCGATGTGGATC+CGG + tig0023826:48622-48641 Msa1411690:CDS 45.0%
TGGAATATGATTGCAGGTGG+TGG + tig0023826:49160-49179 Msa1411690:intron 45.0%
!!! TTTTTTTTCTATTTTTTAAA+AGG + tig0023826:47072-47091 Msa1411690:intron 5.0%
!!! TTTTTTTCTATTTTTTAAAA+GGG + tig0023826:47073-47092 Msa1411690:intron 5.0%
!!! TATTTTAAACATAAAATTTA+AGG + tig0023826:48478-48497 Msa1411690:intron 5.0%
GGTGCGAATAGGAAAGTTGG+AGG - tig0023826:44614-44633 None:intergenic 50.0%
! AGGGGTGCGAATAGGAAAGT+TGG - tig0023826:44617-44636 None:intergenic 50.0%
! GGATTAGAAGGGGTGCGAAT+AGG - tig0023826:44625-44644 None:intergenic 50.0%
TGGGGCTTACTGAGAAAACG+GGG - tig0023826:44646-44665 None:intergenic 50.0%
GTGGGGCTTACTGAGAAAAC+GGG - tig0023826:44647-44666 None:intergenic 50.0%
GACCTTCAGAGCTGGAAGTT+CGG + tig0023826:44977-44996 Msa1411690:CDS 50.0%
! TACCGAACTTCCAGCTCTGA+AGG - tig0023826:44982-45001 None:intergenic 50.0%
GCAATCCTCAACTCACAAGC+CGG + tig0023826:45125-45144 Msa1411690:intron 50.0%
CCCAACCTTAAAGCACACAC+TGG - tig0023826:45599-45618 None:intergenic 50.0%
AGCAAGAGGGTCACACATTC+TGG - tig0023826:45630-45649 None:intergenic 50.0%
! TTGCTGGTGGGCCTAAAGTA+AGG + tig0023826:45679-45698 Msa1411690:intron 50.0%
! TGCTGGTGGGCCTAAAGTAA+GGG + tig0023826:45680-45699 Msa1411690:intron 50.0%
TTGGATATCGTCGGGCAAAG+TGG - tig0023826:45908-45927 None:intergenic 50.0%
GGTTGTTTGCCCATGAAGGT+AGG - tig0023826:46278-46297 None:intergenic 50.0%
TCCACAAATTAGGGTGGGTC+GGG - tig0023826:46299-46318 None:intergenic 50.0%
CTCCACAAATTAGGGTGGGT+CGG - tig0023826:46300-46319 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG - tig0023826:46662-46681 None:intergenic 50.0%
!! GACAGGCATCGGTGAAGTAT+TGG - tig0023826:47102-47121 None:intergenic 50.0%
TCTGATACGCTGACAGGCAT+CGG - tig0023826:47113-47132 None:intergenic 50.0%
CACATCGAGTACGATATGGG+AGG + tig0023826:47134-47153 Msa1411690:intron 50.0%
GACAAATTCTTTCGGGGGGT+GGG - tig0023826:47222-47241 None:intergenic 50.0%
AGACAAATTCTTTCGGGGGG+TGG - tig0023826:47223-47242 None:intergenic 50.0%
TACATACGAGGAGACTCGTC+TGG + tig0023826:47802-47821 Msa1411690:CDS 50.0%
!! ATGCATAGCTTGCTAGGCAC+AGG + tig0023826:48412-48431 Msa1411690:intron 50.0%
!! TGCATAGCTTGCTAGGCACA+GGG + tig0023826:48413-48432 Msa1411690:intron 50.0%
AAGGTAGTCGATGTGGATCC+GGG + tig0023826:48623-48642 Msa1411690:CDS 50.0%
GATGTGGATCCGGGACTTAA+GGG + tig0023826:48632-48651 Msa1411690:CDS 50.0%
TTCTTGGATCCTGCCAAGGT+GGG - tig0023826:48933-48952 None:intergenic 50.0%
TTTCTTGGATCCTGCCAAGG+TGG - tig0023826:48934-48953 None:intergenic 50.0%
CTCTTTCTTGGATCCTGCCA+AGG - tig0023826:48937-48956 None:intergenic 50.0%
GGTTCACCTTGGCGTGTCTT+AGG + tig0023826:44792-44811 Msa1411690:CDS 55.0%
! GTCGGGTTGTTTGCCCATGA+AGG - tig0023826:46282-46301 None:intergenic 55.0%
ACCCGACCCACCCTAATTTG+TGG + tig0023826:46295-46314 Msa1411690:intron 55.0%
! CGACCCACCCTAATTTGTGG+AGG + tig0023826:46298-46317 Msa1411690:intron 55.0%
CACGGATACGGATACGGACA+CGG + tig0023826:46499-46518 Msa1411690:intron 55.0%
GTGTCTGACACGGGATGACA+CGG + tig0023826:46623-46642 Msa1411690:intron 55.0%
TGTCTGACACGGGATGACAC+GGG + tig0023826:46624-46643 Msa1411690:intron 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG + tig0023826:46661-46680 Msa1411690:intron 55.0%
AATTCTTTCGGGGGGTGGGT+GGG - tig0023826:47218-47237 None:intergenic 55.0%
AAATTCTTTCGGGGGGTGGG+TGG - tig0023826:47219-47238 None:intergenic 55.0%
CGATGTGGATCCGGGACTTA+AGG + tig0023826:48631-48650 Msa1411690:CDS 55.0%
GCTGTGTCACCCTTAAGTCC+CGG - tig0023826:48644-48663 None:intergenic 55.0%
CTTAAGGGTGACACAGCCCA+AGG + tig0023826:48647-48666 Msa1411690:CDS 55.0%
GGAGTGCGAATCGTGCGAAT+AGG + tig0023826:48838-48857 Msa1411690:intron 55.0%
TCTTGGATCCTGCCAAGGTG+GGG - tig0023826:48932-48951 None:intergenic 55.0%
AAGCCAGCAACTCTCGACAC+TGG + tig0023826:49187-49206 Msa1411690:CDS 55.0%
TTGCGAAACTGAGGCTCCTG+CGG + tig0023826:49449-49468 Msa1411690:three_prime_UTR 55.0%
GACACGGACACGACACGACA+CGG + tig0023826:46515-46534 Msa1411690:intron 60.0%
CCGTGTCAGACACGTGTCAC+CGG - tig0023826:46616-46635 None:intergenic 60.0%
CCGGTGACACGTGTCTGACA+CGG + tig0023826:46613-46632 Msa1411690:intron 60.0%
CGGTGACACGTGTCTGACAC+GGG + tig0023826:46614-46633 Msa1411690:intron 60.0%
ACGGGAACACGCCTTATCCG+AGG + tig0023826:46642-46661 Msa1411690:intron 60.0%
GCACGGACACTCCTCGGATA+AGG - tig0023826:46656-46675 None:intergenic 60.0%
! GTGGGGGGGCTTTATACCCT+AGG - tig0023826:48915-48934 None:intergenic 60.0%
GGTATAAAGCCCCCCCACCT+TGG + tig0023826:48917-48936 Msa1411690:intron 60.0%
TTGGATCCTGCCAAGGTGGG+GGG - tig0023826:48930-48949 None:intergenic 60.0%
CTTGGATCCTGCCAAGGTGG+GGG - tig0023826:48931-48950 None:intergenic 60.0%
! GCACCAGTGTCGAGAGTTGC+TGG - tig0023826:49193-49212 None:intergenic 60.0%
TAAAGCCCCCCCACCTTGGC+AGG + tig0023826:48921-48940 Msa1411690:intron 65.0%
TGGATCCTGCCAAGGTGGGG+GGG - tig0023826:48929-48948 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0023826 gene 44469 49574 44469 ID=Msa1411690;Name=Msa1411690
tig0023826 mRNA 44469 49574 44469 ID=Msa1411690-mRNA-1;Parent=Msa1411690;Name=Msa1411690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=69|1|1|1|1|1|7|277|228
tig0023826 exon 44469 44655 44469 ID=Msa1411690-mRNA-1:exon:20240;Parent=Msa1411690-mRNA-1
tig0023826 exon 44736 44813 44736 ID=Msa1411690-mRNA-1:exon:20241;Parent=Msa1411690-mRNA-1
tig0023826 exon 44892 44998 44892 ID=Msa1411690-mRNA-1:exon:20242;Parent=Msa1411690-mRNA-1
tig0023826 exon 47509 47586 47509 ID=Msa1411690-mRNA-1:exon:20243;Parent=Msa1411690-mRNA-1
tig0023826 exon 47800 47901 47800 ID=Msa1411690-mRNA-1:exon:20244;Parent=Msa1411690-mRNA-1
tig0023826 exon 48587 48668 48587 ID=Msa1411690-mRNA-1:exon:20245;Parent=Msa1411690-mRNA-1
tig0023826 exon 49176 49574 49176 ID=Msa1411690-mRNA-1:exon:20246;Parent=Msa1411690-mRNA-1
tig0023826 five_prime_UTR 44469 44537 44469 ID=Msa1411690-mRNA-1:five_prime_utr;Parent=Msa1411690-mRNA-1
tig0023826 CDS 44538 44655 44538 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 44736 44813 44736 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 44892 44998 44892 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 47509 47586 47509 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 47800 47901 47800 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 48587 48668 48587 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 CDS 49176 49297 49176 ID=Msa1411690-mRNA-1:cds;Parent=Msa1411690-mRNA-1
tig0023826 three_prime_UTR 49298 49574 49298 ID=Msa1411690-mRNA-1:three_prime_utr;Parent=Msa1411690-mRNA-1
Gene Sequence

>Msa1411690

ATGATAGCGGGAAGTGCTACCTTGAAGCTCAATCTCTCCTATTTCTCTCTCCGCAAATCTTCTTCTTCATACCCCTCCAACTTTCCTATTCGCACCCCTTCTAATCCCCGTTTTCTCAAGATTTATGCTATTTCTAGTAATGACATTAAAGTTGGTACTAATATCGAAGTTGATGGTTCACCTTGGCGTGTCTTAGAGTTTCTTCATGTGAAACCTGGAAAAGGTGCTGCATTTGTGAGGACTAAGCTTAAGAATCATCTTACTGGAAATACTGTTGAAAAGACCTTCAGAGCTGGAAGTTCGATTGATGAAGCTGATATAGTCAAGGAAACAAAACAGTTCACATATAAAGATGGTGTTCAATTTGTCTTCATGGACTTGAGTACATACGAGGAGACTCGTCTGGATGAATCAGAAGTTGGGAACAAAACAAAGTGGCTGAAAGAAGGAATGGACTGCAATTTGCTGTTATGGAATGGAAAAGTTATTGATGTTGATCTCCCTATAACAGTCAAGCTTAAGGTAGTCGATGTGGATCCGGGACTTAAGGGTGACACAGCCCAAGGTGGTGGATCAAAGCCAGCAACTCTCGACACTGGTGCTATTGTCAATGTCCCGCTCTTTGTAAATATAGGCGAGGAAATACTGGTTGATACAAGATCTGGGCAGTACATGAGCCGTGCTTAA

Protein sequence

>Msa1411690

MIAGSATLKLNLSYFSLRKSSSSYPSNFPIRTPSNPRFLKIYAISSNDIKVGTNIEVDGSPWRVLEFLHVKPGKGAAFVRTKLKNHLTGNTVEKTFRAGSSIDEADIVKETKQFTYKDGVQFVFMDLSTYEETRLDESEVGNKTKWLKEGMDCNLLLWNGKVIDVDLPITVKLKVVDVDPGLKGDTAQGGGSKPATLDTGAIVNVPLFVNIGEEILVDTRSGQYMSRA*