Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0883570 | A0A6A2YVP4 | 50.000 | 182 | 35 | 7 | 7 | 140 | 171 | 344 | 8.74e-12 | 72.4 |
| Msa0883570 | A0A6A2YVP4 | 58.779 | 131 | 29 | 6 | 29 | 140 | 168 | 292 | 2.43e-11 | 71.2 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017710 | Msa0883570 | 0.803826 | 2.896215e-49 | -8.615850e-47 |
| Msa0105140 | Msa0883570 | -0.806341 | 8.623781e-50 | -8.615850e-47 |
| Msa0603310 | Msa0883570 | 0.813651 | 2.298155e-51 | -8.615850e-47 |
| Msa0614960 | Msa0883570 | 0.809761 | 1.612722e-50 | -8.615850e-47 |
| Msa0643230 | Msa0883570 | 0.810488 | 1.124314e-50 | -8.615850e-47 |
| Msa0644340 | Msa0883570 | 0.802127 | 6.502279e-49 | -8.615850e-47 |
| Msa0652590 | Msa0883570 | 0.808958 | 2.397399e-50 | -8.615850e-47 |
| Msa0652600 | Msa0883570 | 0.818781 | 1.638200e-52 | -8.615850e-47 |
| Msa0655370 | Msa0883570 | 0.808402 | 3.152565e-50 | -8.615850e-47 |
| Msa0657340 | Msa0883570 | 0.800424 | 1.450655e-48 | -8.615850e-47 |
| Msa0675590 | Msa0883570 | 0.813699 | 2.242800e-51 | -8.615850e-47 |
| Msa0679220 | Msa0883570 | 0.812192 | 4.798666e-51 | -8.615850e-47 |
| Msa0699170 | Msa0883570 | 0.827974 | 1.163163e-54 | -8.615850e-47 |
| Msa0708680 | Msa0883570 | 0.802919 | 4.463567e-49 | -8.615850e-47 |
| Msa0715040 | Msa0883570 | 0.823780 | 1.151757e-53 | -8.615850e-47 |
| Msa0716620 | Msa0883570 | 0.823148 | 1.619071e-53 | -8.615850e-47 |
| Msa0728230 | Msa0883570 | 0.825110 | 5.604931e-54 | -8.615850e-47 |
| Msa0728570 | Msa0883570 | 0.828356 | 9.408448e-55 | -8.615850e-47 |
| Msa0731580 | Msa0883570 | 0.809836 | 1.554270e-50 | -8.615850e-47 |
| Msa0736560 | Msa0883570 | 0.803531 | 3.334201e-49 | -8.615850e-47 |
| Msa0743370 | Msa0883570 | 0.811737 | 6.027691e-51 | -8.615850e-47 |
| Msa0744550 | Msa0883570 | 0.806777 | 6.974692e-50 | -8.615850e-47 |
| Msa0744710 | Msa0883570 | 0.844647 | 6.640699e-59 | -8.615850e-47 |
| Msa0750830 | Msa0883570 | 0.818999 | 1.462244e-52 | -8.615850e-47 |
| Msa0758990 | Msa0883570 | 0.804241 | 2.374074e-49 | -8.615850e-47 |
| Msa0771810 | Msa0883570 | 0.802602 | 5.190912e-49 | -8.615850e-47 |
| Msa0772350 | Msa0883570 | 0.812119 | 4.977572e-51 | -8.615850e-47 |
| Msa0792410 | Msa0883570 | 0.801529 | 8.624712e-49 | -8.615850e-47 |
| Msa0794200 | Msa0883570 | 0.802827 | 4.662703e-49 | -8.615850e-47 |
| Msa0795320 | Msa0883570 | 0.800709 | 1.269157e-48 | -8.615850e-47 |
| Msa0799120 | Msa0883570 | 0.805700 | 1.175952e-49 | -8.615850e-47 |
| Msa0809920 | Msa0883570 | 0.804523 | 2.073376e-49 | -8.615850e-47 |
| Msa0817190 | Msa0883570 | 0.802073 | 6.670513e-49 | -8.615850e-47 |
| Msa0826240 | Msa0883570 | 0.846802 | 1.727155e-59 | -8.615850e-47 |
| Msa0838210 | Msa0883570 | 0.803072 | 4.150132e-49 | -8.615850e-47 |
| Msa0143640 | Msa0883570 | 0.809311 | 2.015107e-50 | -8.615850e-47 |
| Msa0186240 | Msa0883570 | 0.834209 | 3.420633e-56 | -8.615850e-47 |
| Msa0403740 | Msa0883570 | -0.806008 | 1.013315e-49 | -8.615850e-47 |
| Msa0433090 | Msa0883570 | 0.804677 | 1.925712e-49 | -8.615850e-47 |
| Msa0434300 | Msa0883570 | 0.827615 | 1.418872e-54 | -8.615850e-47 |
| Msa0434400 | Msa0883570 | 0.808925 | 2.436719e-50 | -8.615850e-47 |
| Msa0443040 | Msa0883570 | 0.809186 | 2.143415e-50 | -8.615850e-47 |
| Msa0456450 | Msa0883570 | -0.803141 | 4.015605e-49 | -8.615850e-47 |
| Msa0464310 | Msa0883570 | 0.802982 | 4.331133e-49 | -8.615850e-47 |
| Msa0478080 | Msa0883570 | 0.830104 | 3.544462e-55 | -8.615850e-47 |
| Msa0480540 | Msa0883570 | 0.804330 | 2.274825e-49 | -8.615850e-47 |
| Msa0242720 | Msa0883570 | 0.849949 | 2.327895e-60 | -8.615850e-47 |
| Msa0246140 | Msa0883570 | 0.800514 | 1.390813e-48 | -8.615850e-47 |
| Msa0248320 | Msa0883570 | 0.800700 | 1.274393e-48 | -8.615850e-47 |
| Msa0265650 | Msa0883570 | 0.817448 | 3.279792e-52 | -8.615850e-47 |
| Msa0303900 | Msa0883570 | 0.826359 | 2.832979e-54 | -8.615850e-47 |
| Msa0307630 | Msa0883570 | 0.801840 | 7.447929e-49 | -8.615850e-47 |
| Msa0320170 | Msa0883570 | 0.837590 | 4.751003e-57 | -8.615850e-47 |
| Msa0324810 | Msa0883570 | 0.810083 | 1.374608e-50 | -8.615850e-47 |
| Msa0331070 | Msa0883570 | -0.800962 | 1.126715e-48 | -8.615850e-47 |
| Msa0333770 | Msa0883570 | 0.819287 | 1.257393e-52 | -8.615850e-47 |
| Msa0364030 | Msa0883570 | -0.806001 | 1.016581e-49 | -8.615850e-47 |
| Msa0490060 | Msa0883570 | 0.807111 | 5.929336e-50 | -8.615850e-47 |
| Msa0490100 | Msa0883570 | 0.815060 | 1.121864e-51 | -8.615850e-47 |
| Msa0516000 | Msa0883570 | -0.801599 | 8.346524e-49 | -8.615850e-47 |
| Msa0522140 | Msa0883570 | 0.838619 | 2.582596e-57 | -8.615850e-47 |
| Msa0522170 | Msa0883570 | 0.836145 | 1.110739e-56 | -8.615850e-47 |
| Msa0524710 | Msa0883570 | 0.803484 | 3.409887e-49 | -8.615850e-47 |
| Msa0557240 | Msa0883570 | 0.810259 | 1.259635e-50 | -8.615850e-47 |
| Msa0557250 | Msa0883570 | 0.835543 | 1.578780e-56 | -8.615850e-47 |
| Msa0561110 | Msa0883570 | 0.811947 | 5.426118e-51 | -8.615850e-47 |
| Msa0561830 | Msa0883570 | 0.800399 | 1.467763e-48 | -8.615850e-47 |
| Msa0565180 | Msa0883570 | 0.808691 | 2.734577e-50 | -8.615850e-47 |
| Msa0580840 | Msa0883570 | 0.802488 | 5.477461e-49 | -8.615850e-47 |
| Msa0587730 | Msa0883570 | 0.803070 | 4.155040e-49 | -8.615850e-47 |
| Msa0602100 | Msa0883570 | 0.807334 | 5.318360e-50 | -8.615850e-47 |
| Msa0865830 | Msa0883570 | 0.809154 | 2.176741e-50 | -8.615850e-47 |
| Msa0874750 | Msa0883570 | 0.806192 | 9.266883e-50 | -8.615850e-47 |
| Msa0883570 | Msa0901270 | 0.834023 | 3.808522e-56 | -8.615850e-47 |
| Msa0883570 | Msa0901290 | 0.808949 | 2.408890e-50 | -8.615850e-47 |
| Msa0883570 | Msa0910610 | 0.861368 | 1.077605e-63 | -8.615850e-47 |
| Msa0883570 | Msa0945330 | 0.801409 | 9.127639e-49 | -8.615850e-47 |
| Msa0883570 | Msa0985320 | 0.835089 | 2.055994e-56 | -8.615850e-47 |
| Msa0883570 | Msa0985360 | 0.843313 | 1.513075e-58 | -8.615850e-47 |
| Msa0883570 | Msa1001120 | 0.839179 | 1.850002e-57 | -8.615850e-47 |
| Msa0883570 | Msa1027340 | 0.818282 | 2.126128e-52 | -8.615850e-47 |
| Msa0883570 | Msa1027400 | 0.815607 | 8.479548e-52 | -8.615850e-47 |
| Msa0883570 | Msa1030210 | 0.811491 | 6.817366e-51 | -8.615850e-47 |
| Msa0883570 | Msa1034950 | 0.810202 | 1.296148e-50 | -8.615850e-47 |
| Msa0883570 | Msa1035050 | 0.831259 | 1.847019e-55 | -8.615850e-47 |
| Msa0883570 | Msa1041250 | 0.806767 | 7.010210e-50 | -8.615850e-47 |
| Msa0883570 | Msa1056890 | 0.809173 | 2.156311e-50 | -8.615850e-47 |
| Msa0883570 | Msa1071350 | 0.817771 | 2.774443e-52 | -8.615850e-47 |
| Msa0883570 | Msa1075010 | 0.810149 | 1.330871e-50 | -8.615850e-47 |
| Msa0883570 | Msa1075090 | 0.845768 | 3.305595e-59 | -8.615850e-47 |
| Msa0883570 | Msa1077970 | 0.822433 | 2.375696e-53 | -8.615850e-47 |
| Msa0883570 | Msa1085820 | 0.805298 | 1.428059e-49 | -8.615850e-47 |
| Msa0883570 | Msa1100330 | 0.802315 | 5.947798e-49 | -8.615850e-47 |
| Msa0883570 | Msa1107250 | 0.813053 | 3.109274e-51 | -8.615850e-47 |
| Msa0883570 | Msa1108560 | 0.810193 | 1.302131e-50 | -8.615850e-47 |
| Msa0883570 | Msa1110900 | 0.806697 | 7.251987e-50 | -8.615850e-47 |
| Msa0883570 | Msa1115980 | 0.833319 | 5.708583e-56 | -8.615850e-47 |
| Msa0883570 | Msa1131120 | 0.807997 | 3.845796e-50 | -8.615850e-47 |
| Msa0883570 | Msa1136630 | 0.814996 | 1.159029e-51 | -8.615850e-47 |
| Msa0883570 | Msa1150740 | 0.825836 | 3.771888e-54 | -8.615850e-47 |
| Msa0883570 | Msa1150760 | 0.811748 | 5.994347e-51 | -8.615850e-47 |
| Msa0883570 | Msa1150920 | 0.804233 | 2.382982e-49 | -8.615850e-47 |
| Msa0883570 | Msa1154570 | 0.819822 | 9.489387e-53 | -8.615850e-47 |
| Msa0883570 | Msa1162430 | 0.834879 | 2.322462e-56 | -8.615850e-47 |
| Msa0883570 | Msa1174280 | 0.825611 | 4.265254e-54 | -8.615850e-47 |
| Msa0883570 | Msa1185270 | 0.811138 | 8.131879e-51 | -8.615850e-47 |
| Msa0883570 | Msa1191350 | 0.807737 | 4.367801e-50 | -8.615850e-47 |
| Msa0883570 | Msa1191530 | -0.811821 | 5.778289e-51 | -8.615850e-47 |
| Msa0883570 | Msa1199540 | -0.806880 | 6.633660e-50 | -8.615850e-47 |
| Msa0883570 | Msa1202110 | 0.822969 | 1.782177e-53 | -8.615850e-47 |
| Msa0883570 | Msa1205360 | 0.800335 | 1.512487e-48 | -8.615850e-47 |
| Msa0883570 | Msa1211610 | 0.807323 | 5.347084e-50 | -8.615850e-47 |
| Msa0883570 | Msa1223990 | 0.807952 | 3.930368e-50 | -8.615850e-47 |
| Msa0883570 | Msa1238250 | 0.805137 | 1.543282e-49 | -8.615850e-47 |
| Msa0883570 | Msa1239190 | 0.800941 | 1.137694e-48 | -8.615850e-47 |
| Msa0883570 | Msa1239940 | 0.801301 | 9.604620e-49 | -8.615850e-47 |
| Msa0883570 | Msa1254870 | 0.820445 | 6.832805e-53 | -8.615850e-47 |
| Msa0883570 | Msa1263110 | 0.814824 | 1.265392e-51 | -8.615850e-47 |
| Msa0883570 | Msa1284020 | 0.801218 | 9.986793e-49 | -8.615850e-47 |
| Msa0883570 | Msa1299480 | 0.801123 | 1.044608e-48 | -8.615850e-47 |
| Msa0883570 | Msa1319030 | 0.805503 | 1.293680e-49 | -8.615850e-47 |
| Msa0883570 | Msa1319190 | 0.804952 | 1.687565e-49 | -8.615850e-47 |
| Msa0883570 | Msa1319760 | 0.810928 | 9.031267e-51 | -8.615850e-47 |
| Msa0883570 | Msa1320160 | 0.804029 | 2.627804e-49 | -8.615850e-47 |
| Msa0883570 | Msa1322500 | 0.807409 | 5.126714e-50 | -8.615850e-47 |
| Msa0883570 | Msa1328430 | 0.818540 | 1.858055e-52 | -8.615850e-47 |
| Msa0883570 | Msa1342360 | -0.802224 | 6.210131e-49 | -8.615850e-47 |
| Msa0883570 | Msa1357570 | 0.803193 | 3.918492e-49 | -8.615850e-47 |
| Msa0883570 | Msa1366480 | 0.816846 | 4.480334e-52 | -8.615850e-47 |
| Msa0883570 | Msa1437590 | 0.803912 | 2.779505e-49 | -8.615850e-47 |
| Msa0883570 | Msa1459920 | 0.819407 | 1.180442e-52 | -8.615850e-47 |
| Msa0883570 | Msa1462610 | 0.801791 | 7.622569e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 64 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTGTAGGGCTTCTT+TGG | 0.254191 | 6_1:-34794421 | None:intergenic |
| GGATACTTGTATGGCTTCTT+AGG | 0.255496 | 6_1:-34794616 | None:intergenic |
| GGATACTTATAAGGTTTCTT+TGG | 0.305468 | 6_1:-34794274 | None:intergenic |
| TGGTGACTTGTAATAGTAAT+AGG | 0.322769 | 6_1:-34794503 | None:intergenic |
| GGTGGTGAAGGATACTTATA+AGG | 0.323970 | 6_1:-34794283 | None:intergenic |
| GGCTTCTTTGGTGGCGGTGG+CGG | 0.349513 | 6_1:-34794409 | None:intergenic |
| GGAGACTTGTACTTATATAT+TGG | 0.354256 | 6_1:-34794385 | None:intergenic |
| TTCTTTGGTGGCGGTGGCGG+AGG | 0.367644 | 6_1:-34794406 | None:intergenic |
| CTTTATTTGCAACTGTTCTT+CGG | 0.382892 | 6_1:-34795810 | None:intergenic |
| TGGTGGTGATGAGTATTTGT+AGG | 0.407617 | 6_1:-34794359 | None:intergenic |
| GTTCGACGCGGTGGTGGTGG+TGG | 0.408034 | 6_1:-34794478 | None:intergenic |
| TGGTGACTTGTAATAGTAGT+AGG | 0.408708 | 6_1:-34794545 | None:intergenic |
| TAGGGCTTCTTTGGTGGCGG+TGG | 0.414656 | 6_1:-34794412 | None:intergenic |
| TAGGGTGTTCGGCGTGGTGG+TGG | 0.420964 | 6_1:-34794526 | None:intergenic |
| GGTGTTCGGCGTGGTGGTGG+TGG | 0.425247 | 6_1:-34794523 | None:intergenic |
| GGTGTTCGACGCGGTGGTGG+TGG | 0.425362 | 6_1:-34794481 | None:intergenic |
| GGCTTCCTATGTGGTGGTGG+TGG | 0.431209 | 6_1:-34794565 | None:intergenic |
| TGGAGGTGATGGATATTTGT+AGG | 0.433356 | 6_1:-34794431 | None:intergenic |
| TACTTATATATTGGTGGTGG+TGG | 0.441984 | 6_1:-34794376 | None:intergenic |
| TTTGGTGGTGATGGTGAAGA+TGG | 0.442433 | 6_1:-34794256 | None:intergenic |
| AACTTTGGTGGAGGTGGTGA+AGG | 0.456550 | 6_1:-34794295 | None:intergenic |
| TATGGCTTCTTAGGTGGTGG+TGG | 0.463859 | 6_1:-34794607 | None:intergenic |
| TAAGGTTTCTTTGGTGGTGA+TGG | 0.464174 | 6_1:-34794265 | None:intergenic |
| GGAGGTGATGGATATTTGTA+GGG | 0.465112 | 6_1:-34794430 | None:intergenic |
| TACTTGTAGACTGGTGGTGG+TGG | 0.475386 | 6_1:-34794643 | None:intergenic |
| TACTTATAAGGTTTCTTTGG+TGG | 0.482329 | 6_1:-34794271 | None:intergenic |
| TAGGGTGTTCGACGCGGTGG+TGG | 0.482891 | 6_1:-34794484 | None:intergenic |
| GAGTAATGGTAAGGAAACTT+TGG | 0.487085 | 6_1:-34794310 | None:intergenic |
| TAGGTGGTGGTGGAGGAAAC+TGG | 0.489905 | 6_1:-34794597 | None:intergenic |
| AATAAAGTAAACATGATCAA+TGG | 0.490485 | 6_1:+34795826 | Msa0883570:CDS |
| TAAGGAAACTTTGGTGGAGG+TGG | 0.490542 | 6_1:-34794301 | None:intergenic |
| TATTTGTAGGGCTTCTTTGG+TGG | 0.493683 | 6_1:-34794418 | None:intergenic |
| GGCTTCTTAGGTGGTGGTGG+AGG | 0.495363 | 6_1:-34794604 | None:intergenic |
| GGTGACTTGTAATAGTAATA+GGG | 0.497501 | 6_1:-34794502 | None:intergenic |
| TAGGGCTTCCTATGTGGTGG+TGG | 0.509045 | 6_1:-34794568 | None:intergenic |
| TGTAATAGTAGTAGGGTGTT+CGG | 0.516719 | 6_1:-34794537 | None:intergenic |
| TAGACTGGTGGTGGTGGAGA+TGG | 0.518812 | 6_1:-34794637 | None:intergenic |
| GGTGGTGATGAGTATTTGTA+GGG | 0.520681 | 6_1:-34794358 | None:intergenic |
| TAAACTGGTGGTGGAGGTGA+TGG | 0.525705 | 6_1:-34794442 | None:intergenic |
| GGTGGAGATGGATACTTGTA+TGG | 0.527804 | 6_1:-34794625 | None:intergenic |
| TACTTGTAAACTGGTGGTGG+AGG | 0.534343 | 6_1:-34794448 | None:intergenic |
| TTGTAGGGCTTCTTTGGTGG+CGG | 0.534445 | 6_1:-34794415 | None:intergenic |
| GGTGACTTGTAATAGTAGTA+GGG | 0.540950 | 6_1:-34794544 | None:intergenic |
| TTGTATGGCTTCTTAGGTGG+TGG | 0.542024 | 6_1:-34794610 | None:intergenic |
| CACCACATAGGAAGCCCTAC+AGG | 0.542310 | 6_1:+34794572 | Msa0883570:CDS |
| GACTTGTACTTATATATTGG+TGG | 0.550999 | 6_1:-34794382 | None:intergenic |
| GGAGGAAACTGGTACCTGTA+GGG | 0.555962 | 6_1:-34794586 | None:intergenic |
| TTGTACTTGTAAACTGGTGG+TGG | 0.559303 | 6_1:-34794451 | None:intergenic |
| TAATGGTAAGGAAACTTTGG+TGG | 0.559376 | 6_1:-34794307 | None:intergenic |
| TGGTAAGGAAACTTTGGTGG+AGG | 0.559692 | 6_1:-34794304 | None:intergenic |
| TACTTGTATGGCTTCTTAGG+TGG | 0.560678 | 6_1:-34794613 | None:intergenic |
| TAATAGGGTGTTCGACGCGG+TGG | 0.568319 | 6_1:-34794487 | None:intergenic |
| TACCTGTAGGGCTTCCTATG+TGG | 0.569666 | 6_1:-34794574 | None:intergenic |
| AAACATGATCAATGGATCGA+TGG | 0.582654 | 6_1:+34795834 | Msa0883570:CDS |
| TTGTACTTGTAGACTGGTGG+TGG | 0.584798 | 6_1:-34794646 | None:intergenic |
| TGGAGGAAACTGGTACCTGT+AGG | 0.585881 | 6_1:-34794587 | None:intergenic |
| GGTGACTTGTACTTGTAGAC+TGG | 0.589345 | 6_1:-34794652 | None:intergenic |
| GGTGGATATGAGTAATGGTA+AGG | 0.591261 | 6_1:-34794319 | None:intergenic |
| TAGTAGGGTGTTCGGCGTGG+TGG | 0.610992 | 6_1:-34794529 | None:intergenic |
| GACTTGTACTTGTAGACTGG+TGG | 0.615760 | 6_1:-34794649 | None:intergenic |
| CTGTAGGGCTTCCTATGTGG+TGG | 0.620813 | 6_1:-34794571 | None:intergenic |
| TTGTACTTATATATTGGTGG+TGG | 0.621526 | 6_1:-34794379 | None:intergenic |
| TAGTAGTAGGGTGTTCGGCG+TGG | 0.637477 | 6_1:-34794532 | None:intergenic |
| TAGTAATAGGGTGTTCGACG+CGG | 0.647720 | 6_1:-34794490 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGACAAAACTTATATATA+TGG | + | chr6_1:34794759-34794778 | Msa0883570:intron | 15.0% |
| !! | TTGACAAAACTTATATATAT+GGG | + | chr6_1:34794760-34794779 | Msa0883570:intron | 15.0% |
| !! | ATCATAATTCATTTCATTAT+TGG | + | chr6_1:34795126-34795145 | Msa0883570:intron | 15.0% |
| !! | AATTAAATATTAATCTACGA+TGG | - | chr6_1:34795361-34795380 | None:intergenic | 15.0% |
| !! | TTTAAAAATAAAATTGAGCA+AGG | + | chr6_1:34795462-34795481 | Msa0883570:intron | 15.0% |
| !!! | TGAACTTTTTTTTTTTTTTG+AGG | + | chr6_1:34795679-34795698 | Msa0883570:intron | 15.0% |
| !! | TTTGACAAAACTTATATATA+TGG | + | chr6_1:34794759-34794778 | Msa0883570:intron | 15.0% |
| !! | TTGACAAAACTTATATATAT+GGG | + | chr6_1:34794760-34794779 | Msa0883570:intron | 15.0% |
| !! | ATCATAATTCATTTCATTAT+TGG | + | chr6_1:34795126-34795145 | Msa0883570:intron | 15.0% |
| !! | AATTAAATATTAATCTACGA+TGG | - | chr6_1:34795361-34795380 | None:intergenic | 15.0% |
| !! | TTTAAAAATAAAATTGAGCA+AGG | + | chr6_1:34795462-34795481 | Msa0883570:intron | 15.0% |
| !!! | TGAACTTTTTTTTTTTTTTG+AGG | + | chr6_1:34795679-34795698 | Msa0883570:intron | 15.0% |
| !!! | TTTTTAATTATGGACTATTG+AGG | + | chr6_1:34795092-34795111 | Msa0883570:intron | 20.0% |
| !! | ATAAATGGTGAATAAATACT+TGG | + | chr6_1:34795734-34795753 | Msa0883570:intron | 20.0% |
| !! | TAAATGGTGAATAAATACTT+GGG | + | chr6_1:34795735-34795754 | Msa0883570:intron | 20.0% |
| !! | CACACATATATATTATTAGT+TGG | - | chr6_1:34795773-34795792 | None:intergenic | 20.0% |
| !! | AATAAAGTAAACATGATCAA+TGG | + | chr6_1:34795826-34795845 | Msa0883570:CDS | 20.0% |
| !!! | TTTTTAATTATGGACTATTG+AGG | + | chr6_1:34795092-34795111 | Msa0883570:intron | 20.0% |
| !! | ATAAATGGTGAATAAATACT+TGG | + | chr6_1:34795734-34795753 | Msa0883570:intron | 20.0% |
| !! | TAAATGGTGAATAAATACTT+GGG | + | chr6_1:34795735-34795754 | Msa0883570:intron | 20.0% |
| !! | CACACATATATATTATTAGT+TGG | - | chr6_1:34795773-34795792 | None:intergenic | 20.0% |
| !! | AATAAAGTAAACATGATCAA+TGG | + | chr6_1:34795826-34795845 | Msa0883570:CDS | 20.0% |
| ! | TAACTATTTAGTAGTGGTAA+GGG | - | chr6_1:34794684-34794703 | None:intergenic | 25.0% |
| ! | TACTACTAACTATTTAGTAG+TGG | - | chr6_1:34794690-34794709 | None:intergenic | 25.0% |
| ! | AAACATACCATATGTACTAA+GGG | - | chr6_1:34794716-34794735 | None:intergenic | 25.0% |
| !! | CTATAAGACACATTTTATGA+AGG | + | chr6_1:34794788-34794807 | Msa0883570:intron | 25.0% |
| !! | ACACAAACTAATTTTTGTGA+AGG | + | chr6_1:34794850-34794869 | Msa0883570:intron | 25.0% |
| ! | GCAAAGTTATAACTAAATAG+TGG | + | chr6_1:34794882-34794901 | Msa0883570:intron | 25.0% |
| ! | TCAATCTTCACAACTATTAT+AGG | + | chr6_1:34795038-34795057 | Msa0883570:intron | 25.0% |
| ! | CAATCTTCACAACTATTATA+GGG | + | chr6_1:34795039-34795058 | Msa0883570:intron | 25.0% |
| !! | TTATAGGGTTCTAATCAATA+TGG | + | chr6_1:34795054-34795073 | Msa0883570:intron | 25.0% |
| !!! | CTCACACAAGTTTTTAATTA+TGG | + | chr6_1:34795082-34795101 | Msa0883570:intron | 25.0% |
| !!! | TTTTGTGTTTTTACTAGTTG+CGG | - | chr6_1:34795183-34795202 | None:intergenic | 25.0% |
| !! | TGTCCAAATTACAATTGTTT+TGG | + | chr6_1:34795515-34795534 | Msa0883570:intron | 25.0% |
| ! | ATTATTAGTTGGTCATAAAC+TGG | - | chr6_1:34795762-34795781 | None:intergenic | 25.0% |
| ! | TAACTATTTAGTAGTGGTAA+GGG | - | chr6_1:34794684-34794703 | None:intergenic | 25.0% |
| ! | TACTACTAACTATTTAGTAG+TGG | - | chr6_1:34794690-34794709 | None:intergenic | 25.0% |
| ! | AAACATACCATATGTACTAA+GGG | - | chr6_1:34794716-34794735 | None:intergenic | 25.0% |
| !! | CTATAAGACACATTTTATGA+AGG | + | chr6_1:34794788-34794807 | Msa0883570:intron | 25.0% |
| !! | ACACAAACTAATTTTTGTGA+AGG | + | chr6_1:34794850-34794869 | Msa0883570:intron | 25.0% |
| ! | GCAAAGTTATAACTAAATAG+TGG | + | chr6_1:34794882-34794901 | Msa0883570:intron | 25.0% |
| ! | TCAATCTTCACAACTATTAT+AGG | + | chr6_1:34795038-34795057 | Msa0883570:intron | 25.0% |
| ! | CAATCTTCACAACTATTATA+GGG | + | chr6_1:34795039-34795058 | Msa0883570:intron | 25.0% |
| !! | TTATAGGGTTCTAATCAATA+TGG | + | chr6_1:34795054-34795073 | Msa0883570:intron | 25.0% |
| !!! | CTCACACAAGTTTTTAATTA+TGG | + | chr6_1:34795082-34795101 | Msa0883570:intron | 25.0% |
| !!! | TTTTGTGTTTTTACTAGTTG+CGG | - | chr6_1:34795183-34795202 | None:intergenic | 25.0% |
| !! | TGTCCAAATTACAATTGTTT+TGG | + | chr6_1:34795515-34795534 | Msa0883570:intron | 25.0% |
| ! | ATTATTAGTTGGTCATAAAC+TGG | - | chr6_1:34795762-34795781 | None:intergenic | 25.0% |
| TACTTATAAGGTTTCTTTGG+TGG | - | chr6_1:34794274-34794293 | None:intergenic | 30.0% | |
| GGATACTTATAAGGTTTCTT+TGG | - | chr6_1:34794277-34794296 | None:intergenic | 30.0% | |
| !!! | TATTTGTAGGGTTTTTTAGG+AGG | - | chr6_1:34794349-34794368 | None:intergenic | 30.0% |
| !!! | GAGTATTTGTAGGGTTTTTT+AGG | - | chr6_1:34794352-34794371 | None:intergenic | 30.0% |
| TTGTACTTATATATTGGTGG+TGG | - | chr6_1:34794382-34794401 | None:intergenic | 30.0% | |
| GACTTGTACTTATATATTGG+TGG | - | chr6_1:34794385-34794404 | None:intergenic | 30.0% | |
| GGAGACTTGTACTTATATAT+TGG | - | chr6_1:34794388-34794407 | None:intergenic | 30.0% | |
| ! | GGTGACTTGTAATAGTAATA+GGG | - | chr6_1:34794505-34794524 | None:intergenic | 30.0% |
| ! | TGGTGACTTGTAATAGTAAT+AGG | - | chr6_1:34794506-34794525 | None:intergenic | 30.0% |
| AACTATTTAGTAGTGGTAAG+GGG | - | chr6_1:34794683-34794702 | None:intergenic | 30.0% | |
| CTAACTATTTAGTAGTGGTA+AGG | - | chr6_1:34794685-34794704 | None:intergenic | 30.0% | |
| AGTATATCCCTTAGTACATA+TGG | + | chr6_1:34794706-34794725 | Msa0883570:intron | 30.0% | |
| GAAACATACCATATGTACTA+AGG | - | chr6_1:34794717-34794736 | None:intergenic | 30.0% | |
| ATTGCTAAAAGACACATTCA+TGG | + | chr6_1:34794926-34794945 | Msa0883570:intron | 30.0% | |
| TTGCTAAAAGACACATTCAT+GGG | + | chr6_1:34794927-34794946 | Msa0883570:intron | 30.0% | |
| ! | TTATGGACTATTGAGGTTAA+AGG | + | chr6_1:34795099-34795118 | Msa0883570:intron | 30.0% |
| TCGCCAAAACAATTGTAATT+TGG | - | chr6_1:34795521-34795540 | None:intergenic | 30.0% | |
| TCTTCAAACTTTGTACCTAA+AGG | + | chr6_1:34795541-34795560 | Msa0883570:intron | 30.0% | |
| TGACAGTCTAGACAAATAAA+TGG | + | chr6_1:34795719-34795738 | Msa0883570:intron | 30.0% | |
| ! | TATGTGTGTACACTTTTCTT+AGG | + | chr6_1:34795785-34795804 | Msa0883570:intron | 30.0% |
| ! | CTTTATTTGCAACTGTTCTT+CGG | - | chr6_1:34795813-34795832 | None:intergenic | 30.0% |
| TACTTATAAGGTTTCTTTGG+TGG | - | chr6_1:34794274-34794293 | None:intergenic | 30.0% | |
| GGATACTTATAAGGTTTCTT+TGG | - | chr6_1:34794277-34794296 | None:intergenic | 30.0% | |
| !!! | TATTTGTAGGGTTTTTTAGG+AGG | - | chr6_1:34794349-34794368 | None:intergenic | 30.0% |
| !!! | GAGTATTTGTAGGGTTTTTT+AGG | - | chr6_1:34794352-34794371 | None:intergenic | 30.0% |
| TTGTACTTATATATTGGTGG+TGG | - | chr6_1:34794382-34794401 | None:intergenic | 30.0% | |
| GACTTGTACTTATATATTGG+TGG | - | chr6_1:34794385-34794404 | None:intergenic | 30.0% | |
| GGAGACTTGTACTTATATAT+TGG | - | chr6_1:34794388-34794407 | None:intergenic | 30.0% | |
| ! | GGTGACTTGTAATAGTAATA+GGG | - | chr6_1:34794505-34794524 | None:intergenic | 30.0% |
| ! | TGGTGACTTGTAATAGTAAT+AGG | - | chr6_1:34794506-34794525 | None:intergenic | 30.0% |
| AACTATTTAGTAGTGGTAAG+GGG | - | chr6_1:34794683-34794702 | None:intergenic | 30.0% | |
| CTAACTATTTAGTAGTGGTA+AGG | - | chr6_1:34794685-34794704 | None:intergenic | 30.0% | |
| AGTATATCCCTTAGTACATA+TGG | + | chr6_1:34794706-34794725 | Msa0883570:intron | 30.0% | |
| GAAACATACCATATGTACTA+AGG | - | chr6_1:34794717-34794736 | None:intergenic | 30.0% | |
| ATTGCTAAAAGACACATTCA+TGG | + | chr6_1:34794926-34794945 | Msa0883570:intron | 30.0% | |
| TTGCTAAAAGACACATTCAT+GGG | + | chr6_1:34794927-34794946 | Msa0883570:intron | 30.0% | |
| ! | TTATGGACTATTGAGGTTAA+AGG | + | chr6_1:34795099-34795118 | Msa0883570:intron | 30.0% |
| TCGCCAAAACAATTGTAATT+TGG | - | chr6_1:34795521-34795540 | None:intergenic | 30.0% | |
| TCTTCAAACTTTGTACCTAA+AGG | + | chr6_1:34795541-34795560 | Msa0883570:intron | 30.0% | |
| TGACAGTCTAGACAAATAAA+TGG | + | chr6_1:34795719-34795738 | Msa0883570:intron | 30.0% | |
| ! | TATGTGTGTACACTTTTCTT+AGG | + | chr6_1:34795785-34795804 | Msa0883570:intron | 30.0% |
| ! | CTTTATTTGCAACTGTTCTT+CGG | - | chr6_1:34795813-34795832 | None:intergenic | 30.0% |
| TAATGGTAAGGAAACTTTGG+TGG | - | chr6_1:34794310-34794329 | None:intergenic | 35.0% | |
| GAGTAATGGTAAGGAAACTT+TGG | - | chr6_1:34794313-34794332 | None:intergenic | 35.0% | |
| !! | TACTTATATATTGGTGGTGG+TGG | - | chr6_1:34794379-34794398 | None:intergenic | 35.0% |
| GATTTGTACTTGTAAACTGG+TGG | - | chr6_1:34794457-34794476 | None:intergenic | 35.0% | |
| GGAGATTTGTACTTGTAAAC+TGG | - | chr6_1:34794460-34794479 | None:intergenic | 35.0% | |
| ! | TGTAATAGTAGTAGGGTGTT+CGG | - | chr6_1:34794540-34794559 | None:intergenic | 35.0% |
| ! | GGTGACTTGTAATAGTAGTA+GGG | - | chr6_1:34794547-34794566 | None:intergenic | 35.0% |
| ! | TGGTGACTTGTAATAGTAGT+AGG | - | chr6_1:34794548-34794567 | None:intergenic | 35.0% |
| ACTATTTAGTAGTGGTAAGG+GGG | - | chr6_1:34794682-34794701 | None:intergenic | 35.0% | |
| ! | AGCTTGACTTTTTGACCTTT+AGG | - | chr6_1:34795559-34795578 | None:intergenic | 35.0% |
| AAAGTCAAGCTTTCACTACT+AGG | + | chr6_1:34795568-34795587 | Msa0883570:intron | 35.0% | |
| AAACATGATCAATGGATCGA+TGG | + | chr6_1:34795834-34795853 | Msa0883570:CDS | 35.0% | |
| TAATGGTAAGGAAACTTTGG+TGG | - | chr6_1:34794310-34794329 | None:intergenic | 35.0% | |
| GAGTAATGGTAAGGAAACTT+TGG | - | chr6_1:34794313-34794332 | None:intergenic | 35.0% | |
| !! | TACTTATATATTGGTGGTGG+TGG | - | chr6_1:34794379-34794398 | None:intergenic | 35.0% |
| GATTTGTACTTGTAAACTGG+TGG | - | chr6_1:34794457-34794476 | None:intergenic | 35.0% | |
| GGAGATTTGTACTTGTAAAC+TGG | - | chr6_1:34794460-34794479 | None:intergenic | 35.0% | |
| ! | TGTAATAGTAGTAGGGTGTT+CGG | - | chr6_1:34794540-34794559 | None:intergenic | 35.0% |
| ! | GGTGACTTGTAATAGTAGTA+GGG | - | chr6_1:34794547-34794566 | None:intergenic | 35.0% |
| ! | TGGTGACTTGTAATAGTAGT+AGG | - | chr6_1:34794548-34794567 | None:intergenic | 35.0% |
| ACTATTTAGTAGTGGTAAGG+GGG | - | chr6_1:34794682-34794701 | None:intergenic | 35.0% | |
| ! | AGCTTGACTTTTTGACCTTT+AGG | - | chr6_1:34795559-34795578 | None:intergenic | 35.0% |
| AAAGTCAAGCTTTCACTACT+AGG | + | chr6_1:34795568-34795587 | Msa0883570:intron | 35.0% | |
| AAACATGATCAATGGATCGA+TGG | + | chr6_1:34795834-34795853 | Msa0883570:CDS | 35.0% | |
| !! | TAAGGTTTCTTTGGTGGTGA+TGG | - | chr6_1:34794268-34794287 | None:intergenic | 40.0% |
| GGTGGTGAAGGATACTTATA+AGG | - | chr6_1:34794286-34794305 | None:intergenic | 40.0% | |
| GGTGGATATGAGTAATGGTA+AGG | - | chr6_1:34794322-34794341 | None:intergenic | 40.0% | |
| !!! | TGTAGGGTTTTTTAGGAGGT+GGG | - | chr6_1:34794345-34794364 | None:intergenic | 40.0% |
| !!! | TTGTAGGGTTTTTTAGGAGG+TGG | - | chr6_1:34794346-34794365 | None:intergenic | 40.0% |
| ! | GGTGGTGATGAGTATTTGTA+GGG | - | chr6_1:34794361-34794380 | None:intergenic | 40.0% |
| ! | TGGTGGTGATGAGTATTTGT+AGG | - | chr6_1:34794362-34794381 | None:intergenic | 40.0% |
| TATTTGTAGGGCTTCTTTGG+TGG | - | chr6_1:34794421-34794440 | None:intergenic | 40.0% | |
| GGATATTTGTAGGGCTTCTT+TGG | - | chr6_1:34794424-34794443 | None:intergenic | 40.0% | |
| !! | GGAGGTGATGGATATTTGTA+GGG | - | chr6_1:34794433-34794452 | None:intergenic | 40.0% |
| !! | TGGAGGTGATGGATATTTGT+AGG | - | chr6_1:34794434-34794453 | None:intergenic | 40.0% |
| TTGTACTTGTAAACTGGTGG+TGG | - | chr6_1:34794454-34794473 | None:intergenic | 40.0% | |
| TACTTGTATGGCTTCTTAGG+TGG | - | chr6_1:34794616-34794635 | None:intergenic | 40.0% | |
| GGATACTTGTATGGCTTCTT+AGG | - | chr6_1:34794619-34794638 | None:intergenic | 40.0% | |
| ! | ATAGTGGAAATCACACCTTG+AGG | + | chr6_1:34794898-34794917 | Msa0883570:intron | 40.0% |
| ! | TTTTAGCAATCCACACCTCA+AGG | - | chr6_1:34794916-34794935 | None:intergenic | 40.0% |
| !! | TAAGGTTTCTTTGGTGGTGA+TGG | - | chr6_1:34794268-34794287 | None:intergenic | 40.0% |
| GGTGGTGAAGGATACTTATA+AGG | - | chr6_1:34794286-34794305 | None:intergenic | 40.0% | |
| GGTGGATATGAGTAATGGTA+AGG | - | chr6_1:34794322-34794341 | None:intergenic | 40.0% | |
| !!! | TGTAGGGTTTTTTAGGAGGT+GGG | - | chr6_1:34794345-34794364 | None:intergenic | 40.0% |
| !!! | TTGTAGGGTTTTTTAGGAGG+TGG | - | chr6_1:34794346-34794365 | None:intergenic | 40.0% |
| ! | GGTGGTGATGAGTATTTGTA+GGG | - | chr6_1:34794361-34794380 | None:intergenic | 40.0% |
| ! | TGGTGGTGATGAGTATTTGT+AGG | - | chr6_1:34794362-34794381 | None:intergenic | 40.0% |
| TATTTGTAGGGCTTCTTTGG+TGG | - | chr6_1:34794421-34794440 | None:intergenic | 40.0% | |
| GGATATTTGTAGGGCTTCTT+TGG | - | chr6_1:34794424-34794443 | None:intergenic | 40.0% | |
| !! | GGAGGTGATGGATATTTGTA+GGG | - | chr6_1:34794433-34794452 | None:intergenic | 40.0% |
| !! | TGGAGGTGATGGATATTTGT+AGG | - | chr6_1:34794434-34794453 | None:intergenic | 40.0% |
| TTGTACTTGTAAACTGGTGG+TGG | - | chr6_1:34794454-34794473 | None:intergenic | 40.0% | |
| TACTTGTATGGCTTCTTAGG+TGG | - | chr6_1:34794616-34794635 | None:intergenic | 40.0% | |
| GGATACTTGTATGGCTTCTT+AGG | - | chr6_1:34794619-34794638 | None:intergenic | 40.0% | |
| ! | ATAGTGGAAATCACACCTTG+AGG | + | chr6_1:34794898-34794917 | Msa0883570:intron | 40.0% |
| ! | TTTTAGCAATCCACACCTCA+AGG | - | chr6_1:34794916-34794935 | None:intergenic | 40.0% |
| !! | TTTGGTGGTGATGGTGAAGA+TGG | - | chr6_1:34794259-34794278 | None:intergenic | 45.0% |
| TAAGGAAACTTTGGTGGAGG+TGG | - | chr6_1:34794304-34794323 | None:intergenic | 45.0% | |
| TGGTAAGGAAACTTTGGTGG+AGG | - | chr6_1:34794307-34794326 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTTTAGGAGGTGG+GGG | - | chr6_1:34794343-34794362 | None:intergenic | 45.0% |
| !!! | GTAGGGTTTTTTAGGAGGTG+GGG | - | chr6_1:34794344-34794363 | None:intergenic | 45.0% |
| !! | TACTTGTAAACTGGTGGTGG+AGG | - | chr6_1:34794451-34794470 | None:intergenic | 45.0% |
| ! | TAGTAATAGGGTGTTCGACG+CGG | - | chr6_1:34794493-34794512 | None:intergenic | 45.0% |
| TTGTATGGCTTCTTAGGTGG+TGG | - | chr6_1:34794613-34794632 | None:intergenic | 45.0% | |
| GGTGGAGATGGATACTTGTA+TGG | - | chr6_1:34794628-34794647 | None:intergenic | 45.0% | |
| TTGTACTTGTAGACTGGTGG+TGG | - | chr6_1:34794649-34794668 | None:intergenic | 45.0% | |
| GACTTGTACTTGTAGACTGG+TGG | - | chr6_1:34794652-34794671 | None:intergenic | 45.0% | |
| ! | GGTGACTTGTACTTGTAGAC+TGG | - | chr6_1:34794655-34794674 | None:intergenic | 45.0% |
| ATTTAGTAGTGGTAAGGGGG+AGG | - | chr6_1:34794679-34794698 | None:intergenic | 45.0% | |
| !! | TTTGGTGGTGATGGTGAAGA+TGG | - | chr6_1:34794259-34794278 | None:intergenic | 45.0% |
| TAAGGAAACTTTGGTGGAGG+TGG | - | chr6_1:34794304-34794323 | None:intergenic | 45.0% | |
| TGGTAAGGAAACTTTGGTGG+AGG | - | chr6_1:34794307-34794326 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTTTAGGAGGTGG+GGG | - | chr6_1:34794343-34794362 | None:intergenic | 45.0% |
| !!! | GTAGGGTTTTTTAGGAGGTG+GGG | - | chr6_1:34794344-34794363 | None:intergenic | 45.0% |
| !! | TACTTGTAAACTGGTGGTGG+AGG | - | chr6_1:34794451-34794470 | None:intergenic | 45.0% |
| ! | TAGTAATAGGGTGTTCGACG+CGG | - | chr6_1:34794493-34794512 | None:intergenic | 45.0% |
| TTGTATGGCTTCTTAGGTGG+TGG | - | chr6_1:34794613-34794632 | None:intergenic | 45.0% | |
| GGTGGAGATGGATACTTGTA+TGG | - | chr6_1:34794628-34794647 | None:intergenic | 45.0% | |
| TTGTACTTGTAGACTGGTGG+TGG | - | chr6_1:34794649-34794668 | None:intergenic | 45.0% | |
| GACTTGTACTTGTAGACTGG+TGG | - | chr6_1:34794652-34794671 | None:intergenic | 45.0% | |
| ! | GGTGACTTGTACTTGTAGAC+TGG | - | chr6_1:34794655-34794674 | None:intergenic | 45.0% |
| ATTTAGTAGTGGTAAGGGGG+AGG | - | chr6_1:34794679-34794698 | None:intergenic | 45.0% | |
| AACTTTGGTGGAGGTGGTGA+AGG | - | chr6_1:34794298-34794317 | None:intergenic | 50.0% | |
| GTGGGGGTGGATATGAGTAA+TGG | - | chr6_1:34794327-34794346 | None:intergenic | 50.0% | |
| TTGTAGGGCTTCTTTGGTGG+CGG | - | chr6_1:34794418-34794437 | None:intergenic | 50.0% | |
| !! | TAAACTGGTGGTGGAGGTGA+TGG | - | chr6_1:34794445-34794464 | None:intergenic | 50.0% |
| TACCTGTAGGGCTTCCTATG+TGG | - | chr6_1:34794577-34794596 | None:intergenic | 50.0% | |
| GGAGGAAACTGGTACCTGTA+GGG | - | chr6_1:34794589-34794608 | None:intergenic | 50.0% | |
| TGGAGGAAACTGGTACCTGT+AGG | - | chr6_1:34794590-34794609 | None:intergenic | 50.0% | |
| ! | TATGGCTTCTTAGGTGGTGG+TGG | - | chr6_1:34794610-34794629 | None:intergenic | 50.0% |
| !! | TACTTGTAGACTGGTGGTGG+TGG | - | chr6_1:34794646-34794665 | None:intergenic | 50.0% |
| GGAAATCACACCTTGAGGTG+TGG | + | chr6_1:34794903-34794922 | Msa0883570:intron | 50.0% | |
| AACTTTGGTGGAGGTGGTGA+AGG | - | chr6_1:34794298-34794317 | None:intergenic | 50.0% | |
| GTGGGGGTGGATATGAGTAA+TGG | - | chr6_1:34794327-34794346 | None:intergenic | 50.0% | |
| TTGTAGGGCTTCTTTGGTGG+CGG | - | chr6_1:34794418-34794437 | None:intergenic | 50.0% | |
| !! | TAAACTGGTGGTGGAGGTGA+TGG | - | chr6_1:34794445-34794464 | None:intergenic | 50.0% |
| TACCTGTAGGGCTTCCTATG+TGG | - | chr6_1:34794577-34794596 | None:intergenic | 50.0% | |
| GGAGGAAACTGGTACCTGTA+GGG | - | chr6_1:34794589-34794608 | None:intergenic | 50.0% | |
| TGGAGGAAACTGGTACCTGT+AGG | - | chr6_1:34794590-34794609 | None:intergenic | 50.0% | |
| ! | TATGGCTTCTTAGGTGGTGG+TGG | - | chr6_1:34794610-34794629 | None:intergenic | 50.0% |
| !! | TACTTGTAGACTGGTGGTGG+TGG | - | chr6_1:34794646-34794665 | None:intergenic | 50.0% |
| GGAAATCACACCTTGAGGTG+TGG | + | chr6_1:34794903-34794922 | Msa0883570:intron | 50.0% | |
| !!! | GGTTTTTTAGGAGGTGGGGG+TGG | - | chr6_1:34794340-34794359 | None:intergenic | 55.0% |
| ! | TAATAGGGTGTTCGACGCGG+TGG | - | chr6_1:34794490-34794509 | None:intergenic | 55.0% |
| ! | TAGTAGTAGGGTGTTCGGCG+TGG | - | chr6_1:34794535-34794554 | None:intergenic | 55.0% |
| AGTCACCACCACCACCACAT+AGG | + | chr6_1:34794560-34794579 | Msa0883570:CDS | 55.0% | |
| TAGGGCTTCCTATGTGGTGG+TGG | - | chr6_1:34794571-34794590 | None:intergenic | 55.0% | |
| CTGTAGGGCTTCCTATGTGG+TGG | - | chr6_1:34794574-34794593 | None:intergenic | 55.0% | |
| CACCACATAGGAAGCCCTAC+AGG | + | chr6_1:34794572-34794591 | Msa0883570:CDS | 55.0% | |
| !! | TAGGTGGTGGTGGAGGAAAC+TGG | - | chr6_1:34794600-34794619 | None:intergenic | 55.0% |
| !! | TAGACTGGTGGTGGTGGAGA+TGG | - | chr6_1:34794640-34794659 | None:intergenic | 55.0% |
| TAGTAGTGGTAAGGGGGAGG+AGG | - | chr6_1:34794676-34794695 | None:intergenic | 55.0% | |
| !!! | GGTTTTTTAGGAGGTGGGGG+TGG | - | chr6_1:34794340-34794359 | None:intergenic | 55.0% |
| ! | TAATAGGGTGTTCGACGCGG+TGG | - | chr6_1:34794490-34794509 | None:intergenic | 55.0% |
| ! | TAGTAGTAGGGTGTTCGGCG+TGG | - | chr6_1:34794535-34794554 | None:intergenic | 55.0% |
| AGTCACCACCACCACCACAT+AGG | + | chr6_1:34794560-34794579 | Msa0883570:CDS | 55.0% | |
| TAGGGCTTCCTATGTGGTGG+TGG | - | chr6_1:34794571-34794590 | None:intergenic | 55.0% | |
| CTGTAGGGCTTCCTATGTGG+TGG | - | chr6_1:34794574-34794593 | None:intergenic | 55.0% | |
| CACCACATAGGAAGCCCTAC+AGG | + | chr6_1:34794572-34794591 | Msa0883570:CDS | 55.0% | |
| !! | TAGGTGGTGGTGGAGGAAAC+TGG | - | chr6_1:34794600-34794619 | None:intergenic | 55.0% |
| !! | TAGACTGGTGGTGGTGGAGA+TGG | - | chr6_1:34794640-34794659 | None:intergenic | 55.0% |
| TAGTAGTGGTAAGGGGGAGG+AGG | - | chr6_1:34794676-34794695 | None:intergenic | 55.0% | |
| !! | TAGGGCTTCTTTGGTGGCGG+TGG | - | chr6_1:34794415-34794434 | None:intergenic | 60.0% |
| ! | TAGTAGGGTGTTCGGCGTGG+TGG | - | chr6_1:34794532-34794551 | None:intergenic | 60.0% |
| !! | GGCTTCCTATGTGGTGGTGG+TGG | - | chr6_1:34794568-34794587 | None:intergenic | 60.0% |
| !! | GGCTTCTTAGGTGGTGGTGG+AGG | - | chr6_1:34794607-34794626 | None:intergenic | 60.0% |
| !! | TAGGGCTTCTTTGGTGGCGG+TGG | - | chr6_1:34794415-34794434 | None:intergenic | 60.0% |
| ! | TAGTAGGGTGTTCGGCGTGG+TGG | - | chr6_1:34794532-34794551 | None:intergenic | 60.0% |
| !! | GGCTTCCTATGTGGTGGTGG+TGG | - | chr6_1:34794568-34794587 | None:intergenic | 60.0% |
| !! | GGCTTCTTAGGTGGTGGTGG+AGG | - | chr6_1:34794607-34794626 | None:intergenic | 60.0% |
| !! | TTCTTTGGTGGCGGTGGCGG+AGG | - | chr6_1:34794409-34794428 | None:intergenic | 65.0% |
| !! | GGCTTCTTTGGTGGCGGTGG+CGG | - | chr6_1:34794412-34794431 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGACGCGGTGG+TGG | - | chr6_1:34794487-34794506 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGGCGTGGTGG+TGG | - | chr6_1:34794529-34794548 | None:intergenic | 65.0% |
| !! | TTCTTTGGTGGCGGTGGCGG+AGG | - | chr6_1:34794409-34794428 | None:intergenic | 65.0% |
| !! | GGCTTCTTTGGTGGCGGTGG+CGG | - | chr6_1:34794412-34794431 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGACGCGGTGG+TGG | - | chr6_1:34794487-34794506 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGGCGTGGTGG+TGG | - | chr6_1:34794529-34794548 | None:intergenic | 65.0% |
| !! | GTTCGACGCGGTGGTGGTGG+TGG | - | chr6_1:34794481-34794500 | None:intergenic | 70.0% |
| ! | GGTGTTCGACGCGGTGGTGG+TGG | - | chr6_1:34794484-34794503 | None:intergenic | 70.0% |
| !! | GGTGTTCGGCGTGGTGGTGG+TGG | - | chr6_1:34794526-34794545 | None:intergenic | 70.0% |
| !! | GTTCGACGCGGTGGTGGTGG+TGG | - | chr6_1:34794481-34794500 | None:intergenic | 70.0% |
| ! | GGTGTTCGACGCGGTGGTGG+TGG | - | chr6_1:34794484-34794503 | None:intergenic | 70.0% |
| !! | GGTGTTCGGCGTGGTGGTGG+TGG | - | chr6_1:34794526-34794545 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 34794241 | 34795863 | 34794241 | ID=Msa0883570;Name=Msa0883570 |
| chr6_1 | mRNA | 34794241 | 34795863 | 34794241 | ID=Msa0883570-mRNA-1;Parent=Msa0883570;Name=Msa0883570-mRNA-1;_AED=0.40;_eAED=0.83;_QI=0|0|0.33|0.66|0.5|0.33|3|2|155 |
| chr6_1 | exon | 34794241 | 34794459 | 34794241 | ID=Msa0883570-mRNA-1:exon:8461;Parent=Msa0883570-mRNA-1 |
| chr6_1 | exon | 34794469 | 34794662 | 34794469 | ID=Msa0883570-mRNA-1:exon:8462;Parent=Msa0883570-mRNA-1 |
| chr6_1 | exon | 34795807 | 34795863 | 34795807 | ID=Msa0883570-mRNA-1:exon:8463;Parent=Msa0883570-mRNA-1 |
| chr6_1 | CDS | 34794241 | 34794459 | 34794241 | ID=Msa0883570-mRNA-1:cds;Parent=Msa0883570-mRNA-1 |
| chr6_1 | CDS | 34794469 | 34794662 | 34794469 | ID=Msa0883570-mRNA-1:cds;Parent=Msa0883570-mRNA-1 |
| chr6_1 | CDS | 34795807 | 34795861 | 34795807 | ID=Msa0883570-mRNA-1:cds;Parent=Msa0883570-mRNA-1 |
| chr6_1 | three_prime_UTR | 34795862 | 34795863 | 34795862 | ID=Msa0883570-mRNA-1:three_prime_utr;Parent=Msa0883570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
