Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011410 | Msa0910610 | -0.808794 | 2.599418e-50 | -8.615850e-47 |
| Msa0038010 | Msa0910610 | 0.803995 | 2.671768e-49 | -8.615850e-47 |
| Msa0078110 | Msa0910610 | -0.804916 | 1.716895e-49 | -8.615850e-47 |
| Msa0098380 | Msa0910610 | 0.808398 | 3.157990e-50 | -8.615850e-47 |
| Msa0105140 | Msa0910610 | -0.820471 | 6.739907e-53 | -8.615850e-47 |
| Msa0107830 | Msa0910610 | 0.838142 | 3.427405e-57 | -8.615850e-47 |
| Msa0117650 | Msa0910610 | 0.816492 | 5.377412e-52 | -8.615850e-47 |
| Msa0614960 | Msa0910610 | 0.813500 | 2.480304e-51 | -8.615850e-47 |
| Msa0644340 | Msa0910610 | 0.819698 | 1.012937e-52 | -8.615850e-47 |
| Msa0651820 | Msa0910610 | 0.804231 | 2.385617e-49 | -8.615850e-47 |
| Msa0652590 | Msa0910610 | 0.819074 | 1.405322e-52 | -8.615850e-47 |
| Msa0654500 | Msa0910610 | -0.800836 | 1.195315e-48 | -8.615850e-47 |
| Msa0655370 | Msa0910610 | 0.829932 | 3.902263e-55 | -8.615850e-47 |
| Msa0659230 | Msa0910610 | 0.830433 | 2.944973e-55 | -8.615850e-47 |
| Msa0675590 | Msa0910610 | 0.806666 | 7.364314e-50 | -8.615850e-47 |
| Msa0676570 | Msa0910610 | -0.808151 | 3.565283e-50 | -8.615850e-47 |
| Msa0679220 | Msa0910610 | 0.809329 | 1.996446e-50 | -8.615850e-47 |
| Msa0689840 | Msa0910610 | 0.812102 | 5.018377e-51 | -8.615850e-47 |
| Msa0695250 | Msa0910610 | -0.810113 | 1.354379e-50 | -8.615850e-47 |
| Msa0699170 | Msa0910610 | 0.829785 | 4.238141e-55 | -8.615850e-47 |
| Msa0716620 | Msa0910610 | 0.814085 | 1.844065e-51 | -8.615850e-47 |
| Msa0728230 | Msa0910610 | 0.848814 | 4.820396e-60 | -8.615850e-47 |
| Msa0728520 | Msa0910610 | 0.802496 | 5.457491e-49 | -8.615850e-47 |
| Msa0728570 | Msa0910610 | 0.851956 | 6.327960e-61 | -8.615850e-47 |
| Msa0731580 | Msa0910610 | 0.815435 | 9.259596e-52 | -8.615850e-47 |
| Msa0736560 | Msa0910610 | 0.812525 | 4.056995e-51 | -8.615850e-47 |
| Msa0743370 | Msa0910610 | 0.816085 | 6.631153e-52 | -8.615850e-47 |
| Msa0744550 | Msa0910610 | 0.812766 | 3.594427e-51 | -8.615850e-47 |
| Msa0744710 | Msa0910610 | 0.843490 | 1.356838e-58 | -8.615850e-47 |
| Msa0750790 | Msa0910610 | 0.807451 | 5.022982e-50 | -8.615850e-47 |
| Msa0750830 | Msa0910610 | 0.840133 | 1.044472e-57 | -8.615850e-47 |
| Msa0772350 | Msa0910610 | 0.826541 | 2.564026e-54 | -8.615850e-47 |
| Msa0777600 | Msa0910610 | 0.802399 | 5.713888e-49 | -8.615850e-47 |
| Msa0794200 | Msa0910610 | 0.808167 | 3.538087e-50 | -8.615850e-47 |
| Msa0795320 | Msa0910610 | 0.825583 | 4.331982e-54 | -8.615850e-47 |
| Msa0795910 | Msa0910610 | -0.800394 | 1.471062e-48 | -8.615850e-47 |
| Msa0809920 | Msa0910610 | 0.809942 | 1.474114e-50 | -8.615850e-47 |
| Msa0812050 | Msa0910610 | 0.809635 | 1.716512e-50 | -8.615850e-47 |
| Msa0814660 | Msa0910610 | 0.814847 | 1.250683e-51 | -8.615850e-47 |
| Msa0826240 | Msa0910610 | 0.847523 | 1.095677e-59 | -8.615850e-47 |
| Msa0826360 | Msa0910610 | 0.813467 | 2.522034e-51 | -8.615850e-47 |
| Msa0129290 | Msa0910610 | 0.818875 | 1.560411e-52 | -8.615850e-47 |
| Msa0143640 | Msa0910610 | 0.803177 | 3.948878e-49 | -8.615850e-47 |
| Msa0163670 | Msa0910610 | 0.808174 | 3.525828e-50 | -8.615850e-47 |
| Msa0164350 | Msa0910610 | 0.802254 | 6.122319e-49 | -8.615850e-47 |
| Msa0186240 | Msa0910610 | 0.821870 | 3.208938e-53 | -8.615850e-47 |
| Msa0225280 | Msa0910610 | -0.800593 | 1.339990e-48 | -8.615850e-47 |
| Msa0364550 | Msa0910610 | 0.800574 | 1.352161e-48 | -8.615850e-47 |
| Msa0375930 | Msa0910610 | -0.801185 | 1.014241e-48 | -8.615850e-47 |
| Msa0378440 | Msa0910610 | -0.800764 | 1.236794e-48 | -8.615850e-47 |
| Msa0390200 | Msa0910610 | 0.832912 | 7.209989e-56 | -8.615850e-47 |
| Msa0419150 | Msa0910610 | -0.802558 | 5.300008e-49 | -8.615850e-47 |
| Msa0420890 | Msa0910610 | 0.822394 | 2.425032e-53 | -8.615850e-47 |
| Msa0433090 | Msa0910610 | 0.825220 | 5.278174e-54 | -8.615850e-47 |
| Msa0434300 | Msa0910610 | 0.814525 | 1.473736e-51 | -8.615850e-47 |
| Msa0438520 | Msa0910610 | 0.822805 | 1.945922e-53 | -8.615850e-47 |
| Msa0459930 | Msa0910610 | 0.811233 | 7.755443e-51 | -8.615850e-47 |
| Msa0464980 | Msa0910610 | -0.806248 | 9.021764e-50 | -8.615850e-47 |
| Msa0474120 | Msa0910610 | -0.802539 | 5.348282e-49 | -8.615850e-47 |
| Msa0478080 | Msa0910610 | 0.802422 | 5.652031e-49 | -8.615850e-47 |
| Msa0480540 | Msa0910610 | 0.811207 | 7.857157e-51 | -8.615850e-47 |
| Msa0242720 | Msa0910610 | 0.822085 | 2.860073e-53 | -8.615850e-47 |
| Msa0245660 | Msa0910610 | 0.803470 | 3.432523e-49 | -8.615850e-47 |
| Msa0265650 | Msa0910610 | 0.802367 | 5.801969e-49 | -8.615850e-47 |
| Msa0269710 | Msa0910610 | 0.801869 | 7.345850e-49 | -8.615850e-47 |
| Msa0275730 | Msa0910610 | 0.806977 | 6.329351e-50 | -8.615850e-47 |
| Msa0303900 | Msa0910610 | 0.811206 | 7.859930e-51 | -8.615850e-47 |
| Msa0314240 | Msa0910610 | 0.801943 | 7.093462e-49 | -8.615850e-47 |
| Msa0320170 | Msa0910610 | 0.817432 | 3.308416e-52 | -8.615850e-47 |
| Msa0324810 | Msa0910610 | 0.819411 | 1.178175e-52 | -8.615850e-47 |
| Msa0333770 | Msa0910610 | 0.805394 | 1.363419e-49 | -8.615850e-47 |
| Msa0493870 | Msa0910610 | 0.802249 | 6.136767e-49 | -8.615850e-47 |
| Msa0497680 | Msa0910610 | 0.819286 | 1.257985e-52 | -8.615850e-47 |
| Msa0516000 | Msa0910610 | -0.804195 | 2.427697e-49 | -8.615850e-47 |
| Msa0522140 | Msa0910610 | 0.823096 | 1.664683e-53 | -8.615850e-47 |
| Msa0522170 | Msa0910610 | 0.824602 | 7.384767e-54 | -8.615850e-47 |
| Msa0524710 | Msa0910610 | 0.824520 | 7.721324e-54 | -8.615850e-47 |
| Msa0538520 | Msa0910610 | 0.803144 | 4.010825e-49 | -8.615850e-47 |
| Msa0548790 | Msa0910610 | 0.809022 | 2.323988e-50 | -8.615850e-47 |
| Msa0554770 | Msa0910610 | -0.807594 | 4.684145e-50 | -8.615850e-47 |
| Msa0557240 | Msa0910610 | 0.826857 | 2.154716e-54 | -8.615850e-47 |
| Msa0557250 | Msa0910610 | 0.801606 | 8.316654e-49 | -8.615850e-47 |
| Msa0557440 | Msa0910610 | -0.809469 | 1.863394e-50 | -8.615850e-47 |
| Msa0561830 | Msa0910610 | 0.822093 | 2.847892e-53 | -8.615850e-47 |
| Msa0565120 | Msa0910610 | 0.811996 | 5.292649e-51 | -8.615850e-47 |
| Msa0580410 | Msa0910610 | -0.800979 | 1.117801e-48 | -8.615850e-47 |
| Msa0580840 | Msa0910610 | 0.803661 | 3.134540e-49 | -8.615850e-47 |
| Msa0591040 | Msa0910610 | 0.822391 | 2.429324e-53 | -8.615850e-47 |
| Msa0597800 | Msa0910610 | 0.800057 | 1.722623e-48 | -8.615850e-47 |
| Msa0597820 | Msa0910610 | 0.810371 | 1.191838e-50 | -8.615850e-47 |
| Msa0602100 | Msa0910610 | 0.807864 | 4.104057e-50 | -8.615850e-47 |
| Msa0850480 | Msa0910610 | 0.807021 | 6.194361e-50 | -8.615850e-47 |
| Msa0856080 | Msa0910610 | 0.803758 | 2.992598e-49 | -8.615850e-47 |
| Msa0865830 | Msa0910610 | 0.828493 | 8.720508e-55 | -8.615850e-47 |
| Msa0874750 | Msa0910610 | 0.843934 | 1.032415e-58 | -8.615850e-47 |
| Msa0879940 | Msa0910610 | -0.807802 | 4.229880e-50 | -8.615850e-47 |
| Msa0883570 | Msa0910610 | 0.861368 | 1.077605e-63 | -8.615850e-47 |
| Msa0901270 | Msa0910610 | 0.811962 | 5.384595e-51 | -8.615850e-47 |
| Msa0910560 | Msa0910610 | 0.821114 | 4.795199e-53 | -8.615850e-47 |
| Msa0910610 | Msa0945160 | -0.810387 | 1.182235e-50 | -8.615850e-47 |
| Msa0910610 | Msa0976400 | 0.815637 | 8.348871e-52 | -8.615850e-47 |
| Msa0910610 | Msa0985320 | 0.835492 | 1.625759e-56 | -8.615850e-47 |
| Msa0910610 | Msa0985360 | 0.836584 | 8.588175e-57 | -8.615850e-47 |
| Msa0910610 | Msa0985380 | 0.818507 | 1.891267e-52 | -8.615850e-47 |
| Msa0910610 | Msa1001120 | 0.822366 | 2.461923e-53 | -8.615850e-47 |
| Msa0910610 | Msa1002550 | -0.802322 | 5.926700e-49 | -8.615850e-47 |
| Msa0910610 | Msa1003730 | 0.813814 | 2.115688e-51 | -8.615850e-47 |
| Msa0910610 | Msa1003790 | 0.801705 | 7.938003e-49 | -8.615850e-47 |
| Msa0910610 | Msa1011140 | -0.801349 | 9.387786e-49 | -8.615850e-47 |
| Msa0910610 | Msa1030210 | 0.806677 | 7.325369e-50 | -8.615850e-47 |
| Msa0910610 | Msa1031060 | 0.807456 | 5.011072e-50 | -8.615850e-47 |
| Msa0910610 | Msa1035050 | 0.833319 | 5.709406e-56 | -8.615850e-47 |
| Msa0910610 | Msa1041570 | -0.812401 | 4.319337e-51 | -8.615850e-47 |
| Msa0910610 | Msa1048390 | 0.804970 | 1.672550e-49 | -8.615850e-47 |
| Msa0910610 | Msa1061840 | 0.812454 | 4.205917e-51 | -8.615850e-47 |
| Msa0910610 | Msa1075090 | 0.825125 | 5.557802e-54 | -8.615850e-47 |
| Msa0910610 | Msa1085820 | 0.836832 | 7.425299e-57 | -8.615850e-47 |
| Msa0910610 | Msa1088970 | 0.828666 | 7.919663e-55 | -8.615850e-47 |
| Msa0910610 | Msa1107220 | 0.814873 | 1.234451e-51 | -8.615850e-47 |
| Msa0910610 | Msa1107250 | 0.807680 | 4.490317e-50 | -8.615850e-47 |
| Msa0910610 | Msa1109540 | 0.804251 | 2.362855e-49 | -8.615850e-47 |
| Msa0910610 | Msa1115980 | 0.803638 | 3.168315e-49 | -8.615850e-47 |
| Msa0910610 | Msa1119670 | 0.807671 | 4.509677e-50 | -8.615850e-47 |
| Msa0910610 | Msa1124220 | 0.806238 | 9.065619e-50 | -8.615850e-47 |
| Msa0910610 | Msa1130150 | -0.803481 | 3.415325e-49 | -8.615850e-47 |
| Msa0910610 | Msa1130410 | 0.810289 | 1.241129e-50 | -8.615850e-47 |
| Msa0910610 | Msa1132880 | -0.800430 | 1.446526e-48 | -8.615850e-47 |
| Msa0910610 | Msa1136630 | 0.801047 | 1.082694e-48 | -8.615850e-47 |
| Msa0910610 | Msa1150740 | 0.828128 | 1.068150e-54 | -8.615850e-47 |
| Msa0910610 | Msa1150750 | 0.801517 | 8.673804e-49 | -8.615850e-47 |
| Msa0910610 | Msa1150760 | 0.819044 | 1.428014e-52 | -8.615850e-47 |
| Msa0910610 | Msa1151070 | 0.809009 | 2.337894e-50 | -8.615850e-47 |
| Msa0910610 | Msa1162430 | 0.837529 | 4.926496e-57 | -8.615850e-47 |
| Msa0910610 | Msa1166470 | -0.815683 | 8.151861e-52 | -8.615850e-47 |
| Msa0910610 | Msa1174280 | 0.816690 | 4.856940e-52 | -8.615850e-47 |
| Msa0910610 | Msa1191270 | 0.830557 | 2.745941e-55 | -8.615850e-47 |
| Msa0910610 | Msa1199540 | -0.808643 | 2.800641e-50 | -8.615850e-47 |
| Msa0910610 | Msa1202110 | 0.809741 | 1.629107e-50 | -8.615850e-47 |
| Msa0910610 | Msa1204870 | -0.803635 | 3.173087e-49 | -8.615850e-47 |
| Msa0910610 | Msa1204900 | -0.804749 | 1.860331e-49 | -8.615850e-47 |
| Msa0910610 | Msa1211610 | 0.818698 | 1.711161e-52 | -8.615850e-47 |
| Msa0910610 | Msa1212150 | -0.804549 | 2.047897e-49 | -8.615850e-47 |
| Msa0910610 | Msa1221520 | 0.807649 | 4.559700e-50 | -8.615850e-47 |
| Msa0910610 | Msa1223710 | 0.807520 | 4.855940e-50 | -8.615850e-47 |
| Msa0910610 | Msa1239190 | 0.809660 | 1.695444e-50 | -8.615850e-47 |
| Msa0910610 | Msa1239940 | 0.800756 | 1.241189e-48 | -8.615850e-47 |
| Msa0910610 | Msa1254870 | 0.808984 | 2.367922e-50 | -8.615850e-47 |
| Msa0910610 | Msa1256490 | -0.801282 | 9.691233e-49 | -8.615850e-47 |
| Msa0910610 | Msa1263370 | 0.800660 | 1.298428e-48 | -8.615850e-47 |
| Msa0910610 | Msa1264940 | 0.811110 | 8.249385e-51 | -8.615850e-47 |
| Msa0910610 | Msa1279200 | -0.804984 | 1.661817e-49 | -8.615850e-47 |
| Msa0910610 | Msa1299480 | 0.811554 | 6.605750e-51 | -8.615850e-47 |
| Msa0910610 | Msa1303150 | 0.807844 | 4.144744e-50 | -8.615850e-47 |
| Msa0910610 | Msa1316960 | 0.817033 | 4.067529e-52 | -8.615850e-47 |
| Msa0910610 | Msa1319760 | 0.813744 | 2.191584e-51 | -8.615850e-47 |
| Msa0910610 | Msa1320160 | 0.829962 | 3.838583e-55 | -8.615850e-47 |
| Msa0910610 | Msa1328430 | 0.810243 | 1.270036e-50 | -8.615850e-47 |
| Msa0910610 | Msa1334000 | 0.811473 | 6.878073e-51 | -8.615850e-47 |
| Msa0910610 | Msa1364690 | 0.808235 | 3.421426e-50 | -8.615850e-47 |
| Msa0910610 | Msa1386910 | -0.806533 | 7.855337e-50 | -8.615850e-47 |
| Msa0910610 | Msa1398120 | 0.802642 | 5.092706e-49 | -8.615850e-47 |
| Msa0910610 | Msa1407040 | 0.848960 | 4.392296e-60 | -8.615850e-47 |
| Msa0910610 | Msa1415510 | -0.811788 | 5.876898e-51 | -8.615850e-47 |
| Msa0910610 | Msa1437590 | 0.825793 | 3.861574e-54 | -8.615850e-47 |
| Msa0910610 | Msa1459920 | 0.804436 | 2.162635e-49 | -8.615850e-47 |
| Msa0910610 | Msa1459930 | 0.823005 | 1.748099e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 62 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATATTTGTAGGGCTTCTT+TGG | 0.254191 | 6_2:+15253263 | None:intergenic |
| GGATACTTGTATGGCTTCTT+AGG | 0.255496 | 6_2:+15253068 | None:intergenic |
| GGATACTTATAAGGTTTCTT+TGG | 0.305468 | 6_2:+15253410 | None:intergenic |
| TGGTGACTTGTAATAGTAAT+AGG | 0.322769 | 6_2:+15253181 | None:intergenic |
| GGTGGTGAAGGATACTTATA+AGG | 0.323970 | 6_2:+15253401 | None:intergenic |
| GGCTTCTTTGGTGGCGGTGG+CGG | 0.349513 | 6_2:+15253275 | None:intergenic |
| TTCTTTGGTGGCGGTGGCGG+AGG | 0.367644 | 6_2:+15253278 | None:intergenic |
| CTTTATTTGCAACTGTTCTT+CGG | 0.382892 | 6_2:+15251877 | None:intergenic |
| TGGTGGTGATGAGTATTTGT+AGG | 0.407270 | 6_2:+15253325 | None:intergenic |
| GTTCGACGCGGTGGTGGTGG+TGG | 0.408034 | 6_2:+15253206 | None:intergenic |
| TGGTGACTTGTAATAGTAGT+AGG | 0.408708 | 6_2:+15253139 | None:intergenic |
| TAGGGCTTCTTTGGTGGCGG+TGG | 0.414656 | 6_2:+15253272 | None:intergenic |
| TAGGGTGTTCGGCGTGGTGG+TGG | 0.420964 | 6_2:+15253158 | None:intergenic |
| TGGAGGAAACTGGTACTTGT+AGG | 0.422891 | 6_2:+15253097 | None:intergenic |
| GGTGTTCGGCGTGGTGGTGG+TGG | 0.425247 | 6_2:+15253161 | None:intergenic |
| GGTGTTCGACGCGGTGGTGG+TGG | 0.425362 | 6_2:+15253203 | None:intergenic |
| TACTTATATATTGTTGGTGG+TGG | 0.430447 | 6_2:+15253308 | None:intergenic |
| GGCTTCCTATGTGGTGGTGG+TGG | 0.431209 | 6_2:+15253119 | None:intergenic |
| TGGAGGTGATGGATATTTGT+AGG | 0.433356 | 6_2:+15253253 | None:intergenic |
| TTTGGTGGTGATGGTGAAGA+TGG | 0.442433 | 6_2:+15253428 | None:intergenic |
| GACTTGTACTTATATATTGT+TGG | 0.452895 | 6_2:+15253302 | None:intergenic |
| AACTTTGGTGGAGGTGGTGA+AGG | 0.456550 | 6_2:+15253389 | None:intergenic |
| TATGGCTTCTTAGGTGGTGG+TGG | 0.463859 | 6_2:+15253077 | None:intergenic |
| TAAGGTTTCTTTGGTGGTGA+TGG | 0.464174 | 6_2:+15253419 | None:intergenic |
| GGAGGTGATGGATATTTGTA+GGG | 0.465112 | 6_2:+15253254 | None:intergenic |
| TACTTGTAGACTGGTGGTGG+TGG | 0.475386 | 6_2:+15253041 | None:intergenic |
| TACTTATAAGGTTTCTTTGG+TGG | 0.482329 | 6_2:+15253413 | None:intergenic |
| TAGGGTGTTCGACGCGGTGG+TGG | 0.482891 | 6_2:+15253200 | None:intergenic |
| GAGTAATGGTAAGGAAACTT+TGG | 0.487085 | 6_2:+15253374 | None:intergenic |
| TAGGTGGTGGTGGAGGAAAC+TGG | 0.489905 | 6_2:+15253087 | None:intergenic |
| TAAGGAAACTTTGGTGGAGG+TGG | 0.490542 | 6_2:+15253383 | None:intergenic |
| TATTTGTAGGGCTTCTTTGG+TGG | 0.493683 | 6_2:+15253266 | None:intergenic |
| GGCTTCTTAGGTGGTGGTGG+AGG | 0.495363 | 6_2:+15253080 | None:intergenic |
| GGTGACTTGTAATAGTAATA+GGG | 0.497501 | 6_2:+15253182 | None:intergenic |
| TAGGGCTTCCTATGTGGTGG+TGG | 0.509045 | 6_2:+15253116 | None:intergenic |
| TGTAATAGTAGTAGGGTGTT+CGG | 0.516719 | 6_2:+15253147 | None:intergenic |
| TAGACTGGTGGTGGTGGAGA+TGG | 0.518812 | 6_2:+15253047 | None:intergenic |
| GGTGGTGATGAGTATTTGTA+GGG | 0.520681 | 6_2:+15253326 | None:intergenic |
| TAAACTGGTGGTGGAGGTGA+TGG | 0.525705 | 6_2:+15253242 | None:intergenic |
| GGTGGAGATGGATACTTGTA+TGG | 0.527804 | 6_2:+15253059 | None:intergenic |
| TACTTGTAAACTGGTGGTGG+AGG | 0.534343 | 6_2:+15253236 | None:intergenic |
| TTGTAGGGCTTCTTTGGTGG+CGG | 0.534445 | 6_2:+15253269 | None:intergenic |
| GGTGACTTGTAATAGTAGTA+GGG | 0.540950 | 6_2:+15253140 | None:intergenic |
| TTGTATGGCTTCTTAGGTGG+TGG | 0.542024 | 6_2:+15253074 | None:intergenic |
| GGAGGAAACTGGTACTTGTA+GGG | 0.547709 | 6_2:+15253098 | None:intergenic |
| TTGTACTTGTAAACTGGTGG+TGG | 0.559303 | 6_2:+15253233 | None:intergenic |
| TAATGGTAAGGAAACTTTGG+TGG | 0.559376 | 6_2:+15253377 | None:intergenic |
| TGGTAAGGAAACTTTGGTGG+AGG | 0.559692 | 6_2:+15253380 | None:intergenic |
| TACTTGTATGGCTTCTTAGG+TGG | 0.560678 | 6_2:+15253071 | None:intergenic |
| TAATAGGGTGTTCGACGCGG+TGG | 0.568319 | 6_2:+15253197 | None:intergenic |
| AATAAAGTAAACATGATCGA+TGG | 0.572127 | 6_2:-15251861 | Msa0910610:CDS |
| TACTTGTAGGGCTTCCTATG+TGG | 0.573055 | 6_2:+15253110 | None:intergenic |
| AAACATGATCGATGGATCGA+TGG | 0.579013 | 6_2:-15251853 | Msa0910610:CDS |
| TTGTACTTGTAGACTGGTGG+TGG | 0.584798 | 6_2:+15253038 | None:intergenic |
| GGTGACTTGTACTTGTAGAC+TGG | 0.589345 | 6_2:+15253032 | None:intergenic |
| GGTGGATATGAGTAATGGTA+AGG | 0.591261 | 6_2:+15253365 | None:intergenic |
| TTGTACTTATATATTGTTGG+TGG | 0.592574 | 6_2:+15253305 | None:intergenic |
| TAGTAGGGTGTTCGGCGTGG+TGG | 0.610992 | 6_2:+15253155 | None:intergenic |
| GACTTGTACTTGTAGACTGG+TGG | 0.615760 | 6_2:+15253035 | None:intergenic |
| TTGTAGGGCTTCCTATGTGG+TGG | 0.626539 | 6_2:+15253113 | None:intergenic |
| TAGTAGTAGGGTGTTCGGCG+TGG | 0.637477 | 6_2:+15253152 | None:intergenic |
| TAGTAATAGGGTGTTCGACG+CGG | 0.647720 | 6_2:+15253194 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTTTAAAAATAAAATTG+AGG | - | chr6_2:15253055-15253074 | Msa0910610:CDS | 10.0% |
| !!! | AACTTTTTTTTTTTTTTTTG+AGG | - | chr6_2:15253278-15253297 | Msa0910610:CDS | 10.0% |
| !! | TTTGTTTAAAAATAAAATTG+AGG | - | chr6_2:15253055-15253074 | Msa0910610:CDS | 10.0% |
| !!! | AACTTTTTTTTTTTTTTTTG+AGG | - | chr6_2:15253278-15253297 | Msa0910610:CDS | 10.0% |
| !! | TTTGACAAAACTTATATATA+TGG | - | chr6_2:15252364-15252383 | Msa0910610:intron | 15.0% |
| !! | TTGACAAAACTTATATATAT+GGG | - | chr6_2:15252365-15252384 | Msa0910610:intron | 15.0% |
| !! | ATCATAATTCATTTCATTAT+TGG | - | chr6_2:15252723-15252742 | Msa0910610:intron | 15.0% |
| !! | ATTATTATTATGATCATCAA+CGG | - | chr6_2:15252757-15252776 | Msa0910610:intron | 15.0% |
| !! | AATTAAATATTAATCTACGA+TGG | + | chr6_2:15252958-15252977 | None:intergenic | 15.0% |
| !! | TTTAAAAATAAAATTGAGGA+AGG | - | chr6_2:15253059-15253078 | Msa0910610:CDS | 15.0% |
| !! | ACATAGTATATATTATTAGT+TGG | + | chr6_2:15253372-15253391 | None:intergenic | 15.0% |
| !! | TTTGACAAAACTTATATATA+TGG | - | chr6_2:15252364-15252383 | Msa0910610:intron | 15.0% |
| !! | TTGACAAAACTTATATATAT+GGG | - | chr6_2:15252365-15252384 | Msa0910610:intron | 15.0% |
| !! | ATCATAATTCATTTCATTAT+TGG | - | chr6_2:15252723-15252742 | Msa0910610:intron | 15.0% |
| !! | ATTATTATTATGATCATCAA+CGG | - | chr6_2:15252757-15252776 | Msa0910610:intron | 15.0% |
| !! | AATTAAATATTAATCTACGA+TGG | + | chr6_2:15252958-15252977 | None:intergenic | 15.0% |
| !! | TTTAAAAATAAAATTGAGGA+AGG | - | chr6_2:15253059-15253078 | Msa0910610:CDS | 15.0% |
| !! | ACATAGTATATATTATTAGT+TGG | + | chr6_2:15253372-15253391 | None:intergenic | 15.0% |
| !! | ATAAATGGTGAATAAATACT+TGG | - | chr6_2:15253333-15253352 | Msa0910610:CDS | 20.0% |
| !! | TAAATGGTGAATAAATACTT+GGG | - | chr6_2:15253334-15253353 | Msa0910610:CDS | 20.0% |
| !! | ATAAATGGTGAATAAATACT+TGG | - | chr6_2:15253333-15253352 | Msa0910610:CDS | 20.0% |
| !! | TAAATGGTGAATAAATACTT+GGG | - | chr6_2:15253334-15253353 | Msa0910610:CDS | 20.0% |
| ! | TTGTACTTATATATTGTTGG+TGG | + | chr6_2:15251987-15252006 | None:intergenic | 25.0% |
| ! | GACTTGTACTTATATATTGT+TGG | + | chr6_2:15251990-15252009 | None:intergenic | 25.0% |
| ! | TAACTATTTAGTAGTGGTAA+GGG | + | chr6_2:15252289-15252308 | None:intergenic | 25.0% |
| ! | TACTACTAACTATTTAGTAG+TGG | + | chr6_2:15252295-15252314 | None:intergenic | 25.0% |
| ! | AAACATACCATATGTACTAA+GGG | + | chr6_2:15252321-15252340 | None:intergenic | 25.0% |
| !! | ACACAAACTAATTTTTGTGA+AGG | - | chr6_2:15252455-15252474 | Msa0910610:intron | 25.0% |
| ! | GCAAAGTTATAACTAAATAG+TGG | - | chr6_2:15252487-15252506 | Msa0910610:intron | 25.0% |
| ! | TCAATCTTCACAACTATTAT+AGG | - | chr6_2:15252635-15252654 | Msa0910610:intron | 25.0% |
| ! | CAATCTTCACAACTATTATA+GGG | - | chr6_2:15252636-15252655 | Msa0910610:intron | 25.0% |
| !! | TTATAGGGTTCTAATCAATA+TGG | - | chr6_2:15252651-15252670 | Msa0910610:intron | 25.0% |
| !!! | CTCACACAAGTTTTTAATTA+TGG | - | chr6_2:15252679-15252698 | Msa0910610:intron | 25.0% |
| !!! | TTTTTAATTATGGACCATTG+AGG | - | chr6_2:15252689-15252708 | Msa0910610:intron | 25.0% |
| !! | TGTCCAAATTACAATTGTTT+TGG | - | chr6_2:15253112-15253131 | Msa0910610:CDS | 25.0% |
| ! | TCACCAAAACAATTGTAATT+TGG | + | chr6_2:15253118-15253137 | None:intergenic | 25.0% |
| ! | ATTATTAGTTGGTCATAAAC+TGG | + | chr6_2:15253361-15253380 | None:intergenic | 25.0% |
| ! | AATAAAGTAAACATGATCGA+TGG | - | chr6_2:15253428-15253447 | Msa0910610:CDS | 25.0% |
| ! | TTGTACTTATATATTGTTGG+TGG | + | chr6_2:15251987-15252006 | None:intergenic | 25.0% |
| ! | GACTTGTACTTATATATTGT+TGG | + | chr6_2:15251990-15252009 | None:intergenic | 25.0% |
| ! | TAACTATTTAGTAGTGGTAA+GGG | + | chr6_2:15252289-15252308 | None:intergenic | 25.0% |
| ! | TACTACTAACTATTTAGTAG+TGG | + | chr6_2:15252295-15252314 | None:intergenic | 25.0% |
| ! | AAACATACCATATGTACTAA+GGG | + | chr6_2:15252321-15252340 | None:intergenic | 25.0% |
| !! | ACACAAACTAATTTTTGTGA+AGG | - | chr6_2:15252455-15252474 | Msa0910610:intron | 25.0% |
| ! | GCAAAGTTATAACTAAATAG+TGG | - | chr6_2:15252487-15252506 | Msa0910610:intron | 25.0% |
| ! | TCAATCTTCACAACTATTAT+AGG | - | chr6_2:15252635-15252654 | Msa0910610:intron | 25.0% |
| ! | CAATCTTCACAACTATTATA+GGG | - | chr6_2:15252636-15252655 | Msa0910610:intron | 25.0% |
| !! | TTATAGGGTTCTAATCAATA+TGG | - | chr6_2:15252651-15252670 | Msa0910610:intron | 25.0% |
| !!! | CTCACACAAGTTTTTAATTA+TGG | - | chr6_2:15252679-15252698 | Msa0910610:intron | 25.0% |
| !!! | TTTTTAATTATGGACCATTG+AGG | - | chr6_2:15252689-15252708 | Msa0910610:intron | 25.0% |
| !! | TGTCCAAATTACAATTGTTT+TGG | - | chr6_2:15253112-15253131 | Msa0910610:CDS | 25.0% |
| ! | TCACCAAAACAATTGTAATT+TGG | + | chr6_2:15253118-15253137 | None:intergenic | 25.0% |
| ! | ATTATTAGTTGGTCATAAAC+TGG | + | chr6_2:15253361-15253380 | None:intergenic | 25.0% |
| ! | AATAAAGTAAACATGATCGA+TGG | - | chr6_2:15253428-15253447 | Msa0910610:CDS | 25.0% |
| TACTTATAAGGTTTCTTTGG+TGG | + | chr6_2:15251879-15251898 | None:intergenic | 30.0% | |
| GGATACTTATAAGGTTTCTT+TGG | + | chr6_2:15251882-15251901 | None:intergenic | 30.0% | |
| !!! | TATTTGTAGGGTTTTTTAGG+AGG | + | chr6_2:15251954-15251973 | None:intergenic | 30.0% |
| !!! | GAGTATTTGTAGGGTTTTTT+AGG | + | chr6_2:15251957-15251976 | None:intergenic | 30.0% |
| ! | TACTTATATATTGTTGGTGG+TGG | + | chr6_2:15251984-15252003 | None:intergenic | 30.0% |
| ! | GGTGACTTGTAATAGTAATA+GGG | + | chr6_2:15252110-15252129 | None:intergenic | 30.0% |
| ! | TGGTGACTTGTAATAGTAAT+AGG | + | chr6_2:15252111-15252130 | None:intergenic | 30.0% |
| AACTATTTAGTAGTGGTAAG+GGG | + | chr6_2:15252288-15252307 | None:intergenic | 30.0% | |
| CTAACTATTTAGTAGTGGTA+AGG | + | chr6_2:15252290-15252309 | None:intergenic | 30.0% | |
| AGTATATCCCTTAGTACATA+TGG | - | chr6_2:15252311-15252330 | Msa0910610:intron | 30.0% | |
| GAAACATACCATATGTACTA+AGG | + | chr6_2:15252322-15252341 | None:intergenic | 30.0% | |
| ! | CTAGAAGACACATTTTATGA+AGG | - | chr6_2:15252393-15252412 | Msa0910610:intron | 30.0% |
| ATTGCTAAAAGACACATTCA+TGG | - | chr6_2:15252531-15252550 | Msa0910610:intron | 30.0% | |
| TTGCTAAAAGACACATTCAT+GGG | - | chr6_2:15252532-15252551 | Msa0910610:intron | 30.0% | |
| GATATAACCTTTAACCTCAA+TGG | + | chr6_2:15252706-15252725 | None:intergenic | 30.0% | |
| TCTTCAAACTTTGTACCTAA+AGG | - | chr6_2:15253138-15253157 | Msa0910610:CDS | 30.0% | |
| TGACAGTCTAGACAAATAAA+TGG | - | chr6_2:15253318-15253337 | Msa0910610:CDS | 30.0% | |
| ! | TATGTGTGTACACTTTTCTT+AGG | - | chr6_2:15253387-15253406 | Msa0910610:CDS | 30.0% |
| ! | CTTTATTTGCAACTGTTCTT+CGG | + | chr6_2:15253415-15253434 | None:intergenic | 30.0% |
| TACTTATAAGGTTTCTTTGG+TGG | + | chr6_2:15251879-15251898 | None:intergenic | 30.0% | |
| GGATACTTATAAGGTTTCTT+TGG | + | chr6_2:15251882-15251901 | None:intergenic | 30.0% | |
| !!! | TATTTGTAGGGTTTTTTAGG+AGG | + | chr6_2:15251954-15251973 | None:intergenic | 30.0% |
| !!! | GAGTATTTGTAGGGTTTTTT+AGG | + | chr6_2:15251957-15251976 | None:intergenic | 30.0% |
| ! | TACTTATATATTGTTGGTGG+TGG | + | chr6_2:15251984-15252003 | None:intergenic | 30.0% |
| ! | GGTGACTTGTAATAGTAATA+GGG | + | chr6_2:15252110-15252129 | None:intergenic | 30.0% |
| ! | TGGTGACTTGTAATAGTAAT+AGG | + | chr6_2:15252111-15252130 | None:intergenic | 30.0% |
| AACTATTTAGTAGTGGTAAG+GGG | + | chr6_2:15252288-15252307 | None:intergenic | 30.0% | |
| CTAACTATTTAGTAGTGGTA+AGG | + | chr6_2:15252290-15252309 | None:intergenic | 30.0% | |
| AGTATATCCCTTAGTACATA+TGG | - | chr6_2:15252311-15252330 | Msa0910610:intron | 30.0% | |
| GAAACATACCATATGTACTA+AGG | + | chr6_2:15252322-15252341 | None:intergenic | 30.0% | |
| ! | CTAGAAGACACATTTTATGA+AGG | - | chr6_2:15252393-15252412 | Msa0910610:intron | 30.0% |
| ATTGCTAAAAGACACATTCA+TGG | - | chr6_2:15252531-15252550 | Msa0910610:intron | 30.0% | |
| TTGCTAAAAGACACATTCAT+GGG | - | chr6_2:15252532-15252551 | Msa0910610:intron | 30.0% | |
| GATATAACCTTTAACCTCAA+TGG | + | chr6_2:15252706-15252725 | None:intergenic | 30.0% | |
| TCTTCAAACTTTGTACCTAA+AGG | - | chr6_2:15253138-15253157 | Msa0910610:CDS | 30.0% | |
| TGACAGTCTAGACAAATAAA+TGG | - | chr6_2:15253318-15253337 | Msa0910610:CDS | 30.0% | |
| ! | TATGTGTGTACACTTTTCTT+AGG | - | chr6_2:15253387-15253406 | Msa0910610:CDS | 30.0% |
| ! | CTTTATTTGCAACTGTTCTT+CGG | + | chr6_2:15253415-15253434 | None:intergenic | 30.0% |
| TAATGGTAAGGAAACTTTGG+TGG | + | chr6_2:15251915-15251934 | None:intergenic | 35.0% | |
| GAGTAATGGTAAGGAAACTT+TGG | + | chr6_2:15251918-15251937 | None:intergenic | 35.0% | |
| GATTTGTACTTGTAAACTGG+TGG | + | chr6_2:15252062-15252081 | None:intergenic | 35.0% | |
| GGAGATTTGTACTTGTAAAC+TGG | + | chr6_2:15252065-15252084 | None:intergenic | 35.0% | |
| ! | TGTAATAGTAGTAGGGTGTT+CGG | + | chr6_2:15252145-15252164 | None:intergenic | 35.0% |
| ! | GGTGACTTGTAATAGTAGTA+GGG | + | chr6_2:15252152-15252171 | None:intergenic | 35.0% |
| ! | TGGTGACTTGTAATAGTAGT+AGG | + | chr6_2:15252153-15252172 | None:intergenic | 35.0% |
| ACTATTTAGTAGTGGTAAGG+GGG | + | chr6_2:15252287-15252306 | None:intergenic | 35.0% | |
| TTATGGACCATTGAGGTTAA+AGG | - | chr6_2:15252696-15252715 | Msa0910610:intron | 35.0% | |
| ! | AGCTTGACTTTTTGACCTTT+AGG | + | chr6_2:15253156-15253175 | None:intergenic | 35.0% |
| AAAGTCAAGCTTTCACTACT+AGG | - | chr6_2:15253165-15253184 | Msa0910610:CDS | 35.0% | |
| TAATGGTAAGGAAACTTTGG+TGG | + | chr6_2:15251915-15251934 | None:intergenic | 35.0% | |
| GAGTAATGGTAAGGAAACTT+TGG | + | chr6_2:15251918-15251937 | None:intergenic | 35.0% | |
| GATTTGTACTTGTAAACTGG+TGG | + | chr6_2:15252062-15252081 | None:intergenic | 35.0% | |
| GGAGATTTGTACTTGTAAAC+TGG | + | chr6_2:15252065-15252084 | None:intergenic | 35.0% | |
| ! | TGTAATAGTAGTAGGGTGTT+CGG | + | chr6_2:15252145-15252164 | None:intergenic | 35.0% |
| ! | GGTGACTTGTAATAGTAGTA+GGG | + | chr6_2:15252152-15252171 | None:intergenic | 35.0% |
| ! | TGGTGACTTGTAATAGTAGT+AGG | + | chr6_2:15252153-15252172 | None:intergenic | 35.0% |
| ACTATTTAGTAGTGGTAAGG+GGG | + | chr6_2:15252287-15252306 | None:intergenic | 35.0% | |
| TTATGGACCATTGAGGTTAA+AGG | - | chr6_2:15252696-15252715 | Msa0910610:intron | 35.0% | |
| ! | AGCTTGACTTTTTGACCTTT+AGG | + | chr6_2:15253156-15253175 | None:intergenic | 35.0% |
| AAAGTCAAGCTTTCACTACT+AGG | - | chr6_2:15253165-15253184 | Msa0910610:CDS | 35.0% | |
| !! | TAAGGTTTCTTTGGTGGTGA+TGG | + | chr6_2:15251873-15251892 | None:intergenic | 40.0% |
| GGTGGTGAAGGATACTTATA+AGG | + | chr6_2:15251891-15251910 | None:intergenic | 40.0% | |
| GGTGGATATGAGTAATGGTA+AGG | + | chr6_2:15251927-15251946 | None:intergenic | 40.0% | |
| !!! | TGTAGGGTTTTTTAGGAGGT+GGG | + | chr6_2:15251950-15251969 | None:intergenic | 40.0% |
| !!! | TTGTAGGGTTTTTTAGGAGG+TGG | + | chr6_2:15251951-15251970 | None:intergenic | 40.0% |
| ! | GGTGGTGATGAGTATTTGTA+GGG | + | chr6_2:15251966-15251985 | None:intergenic | 40.0% |
| ! | TGGTGGTGATGAGTATTTGT+AGG | + | chr6_2:15251967-15251986 | None:intergenic | 40.0% |
| TATTTGTAGGGCTTCTTTGG+TGG | + | chr6_2:15252026-15252045 | None:intergenic | 40.0% | |
| GGATATTTGTAGGGCTTCTT+TGG | + | chr6_2:15252029-15252048 | None:intergenic | 40.0% | |
| !! | GGAGGTGATGGATATTTGTA+GGG | + | chr6_2:15252038-15252057 | None:intergenic | 40.0% |
| !! | TGGAGGTGATGGATATTTGT+AGG | + | chr6_2:15252039-15252058 | None:intergenic | 40.0% |
| TTGTACTTGTAAACTGGTGG+TGG | + | chr6_2:15252059-15252078 | None:intergenic | 40.0% | |
| TACTTGTATGGCTTCTTAGG+TGG | + | chr6_2:15252221-15252240 | None:intergenic | 40.0% | |
| GGATACTTGTATGGCTTCTT+AGG | + | chr6_2:15252224-15252243 | None:intergenic | 40.0% | |
| ! | ATAGTGGAAATCACACCTTG+AGG | - | chr6_2:15252503-15252522 | Msa0910610:intron | 40.0% |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr6_2:15252521-15252540 | None:intergenic | 40.0% |
| AAACATGATCGATGGATCGA+TGG | - | chr6_2:15253436-15253455 | Msa0910610:CDS | 40.0% | |
| !! | TAAGGTTTCTTTGGTGGTGA+TGG | + | chr6_2:15251873-15251892 | None:intergenic | 40.0% |
| GGTGGTGAAGGATACTTATA+AGG | + | chr6_2:15251891-15251910 | None:intergenic | 40.0% | |
| GGTGGATATGAGTAATGGTA+AGG | + | chr6_2:15251927-15251946 | None:intergenic | 40.0% | |
| !!! | TGTAGGGTTTTTTAGGAGGT+GGG | + | chr6_2:15251950-15251969 | None:intergenic | 40.0% |
| !!! | TTGTAGGGTTTTTTAGGAGG+TGG | + | chr6_2:15251951-15251970 | None:intergenic | 40.0% |
| ! | GGTGGTGATGAGTATTTGTA+GGG | + | chr6_2:15251966-15251985 | None:intergenic | 40.0% |
| ! | TGGTGGTGATGAGTATTTGT+AGG | + | chr6_2:15251967-15251986 | None:intergenic | 40.0% |
| TATTTGTAGGGCTTCTTTGG+TGG | + | chr6_2:15252026-15252045 | None:intergenic | 40.0% | |
| GGATATTTGTAGGGCTTCTT+TGG | + | chr6_2:15252029-15252048 | None:intergenic | 40.0% | |
| !! | GGAGGTGATGGATATTTGTA+GGG | + | chr6_2:15252038-15252057 | None:intergenic | 40.0% |
| !! | TGGAGGTGATGGATATTTGT+AGG | + | chr6_2:15252039-15252058 | None:intergenic | 40.0% |
| TTGTACTTGTAAACTGGTGG+TGG | + | chr6_2:15252059-15252078 | None:intergenic | 40.0% | |
| TACTTGTATGGCTTCTTAGG+TGG | + | chr6_2:15252221-15252240 | None:intergenic | 40.0% | |
| GGATACTTGTATGGCTTCTT+AGG | + | chr6_2:15252224-15252243 | None:intergenic | 40.0% | |
| ! | ATAGTGGAAATCACACCTTG+AGG | - | chr6_2:15252503-15252522 | Msa0910610:intron | 40.0% |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr6_2:15252521-15252540 | None:intergenic | 40.0% |
| AAACATGATCGATGGATCGA+TGG | - | chr6_2:15253436-15253455 | Msa0910610:CDS | 40.0% | |
| !! | TTTGGTGGTGATGGTGAAGA+TGG | + | chr6_2:15251864-15251883 | None:intergenic | 45.0% |
| TAAGGAAACTTTGGTGGAGG+TGG | + | chr6_2:15251909-15251928 | None:intergenic | 45.0% | |
| TGGTAAGGAAACTTTGGTGG+AGG | + | chr6_2:15251912-15251931 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTTTAGGAGGTGG+GGG | + | chr6_2:15251948-15251967 | None:intergenic | 45.0% |
| !!! | GTAGGGTTTTTTAGGAGGTG+GGG | + | chr6_2:15251949-15251968 | None:intergenic | 45.0% |
| !! | TACTTGTAAACTGGTGGTGG+AGG | + | chr6_2:15252056-15252075 | None:intergenic | 45.0% |
| ! | TAGTAATAGGGTGTTCGACG+CGG | + | chr6_2:15252098-15252117 | None:intergenic | 45.0% |
| TACTTGTAGGGCTTCCTATG+TGG | + | chr6_2:15252182-15252201 | None:intergenic | 45.0% | |
| GGAGGAAACTGGTACTTGTA+GGG | + | chr6_2:15252194-15252213 | None:intergenic | 45.0% | |
| TGGAGGAAACTGGTACTTGT+AGG | + | chr6_2:15252195-15252214 | None:intergenic | 45.0% | |
| TTGTATGGCTTCTTAGGTGG+TGG | + | chr6_2:15252218-15252237 | None:intergenic | 45.0% | |
| GGTGGAGATGGATACTTGTA+TGG | + | chr6_2:15252233-15252252 | None:intergenic | 45.0% | |
| TTGTACTTGTAGACTGGTGG+TGG | + | chr6_2:15252254-15252273 | None:intergenic | 45.0% | |
| GACTTGTACTTGTAGACTGG+TGG | + | chr6_2:15252257-15252276 | None:intergenic | 45.0% | |
| ! | GGTGACTTGTACTTGTAGAC+TGG | + | chr6_2:15252260-15252279 | None:intergenic | 45.0% |
| ATTTAGTAGTGGTAAGGGGG+AGG | + | chr6_2:15252284-15252303 | None:intergenic | 45.0% | |
| !! | TTTGGTGGTGATGGTGAAGA+TGG | + | chr6_2:15251864-15251883 | None:intergenic | 45.0% |
| TAAGGAAACTTTGGTGGAGG+TGG | + | chr6_2:15251909-15251928 | None:intergenic | 45.0% | |
| TGGTAAGGAAACTTTGGTGG+AGG | + | chr6_2:15251912-15251931 | None:intergenic | 45.0% | |
| !!! | TAGGGTTTTTTAGGAGGTGG+GGG | + | chr6_2:15251948-15251967 | None:intergenic | 45.0% |
| !!! | GTAGGGTTTTTTAGGAGGTG+GGG | + | chr6_2:15251949-15251968 | None:intergenic | 45.0% |
| !! | TACTTGTAAACTGGTGGTGG+AGG | + | chr6_2:15252056-15252075 | None:intergenic | 45.0% |
| ! | TAGTAATAGGGTGTTCGACG+CGG | + | chr6_2:15252098-15252117 | None:intergenic | 45.0% |
| TACTTGTAGGGCTTCCTATG+TGG | + | chr6_2:15252182-15252201 | None:intergenic | 45.0% | |
| GGAGGAAACTGGTACTTGTA+GGG | + | chr6_2:15252194-15252213 | None:intergenic | 45.0% | |
| TGGAGGAAACTGGTACTTGT+AGG | + | chr6_2:15252195-15252214 | None:intergenic | 45.0% | |
| TTGTATGGCTTCTTAGGTGG+TGG | + | chr6_2:15252218-15252237 | None:intergenic | 45.0% | |
| GGTGGAGATGGATACTTGTA+TGG | + | chr6_2:15252233-15252252 | None:intergenic | 45.0% | |
| TTGTACTTGTAGACTGGTGG+TGG | + | chr6_2:15252254-15252273 | None:intergenic | 45.0% | |
| GACTTGTACTTGTAGACTGG+TGG | + | chr6_2:15252257-15252276 | None:intergenic | 45.0% | |
| ! | GGTGACTTGTACTTGTAGAC+TGG | + | chr6_2:15252260-15252279 | None:intergenic | 45.0% |
| ATTTAGTAGTGGTAAGGGGG+AGG | + | chr6_2:15252284-15252303 | None:intergenic | 45.0% | |
| AACTTTGGTGGAGGTGGTGA+AGG | + | chr6_2:15251903-15251922 | None:intergenic | 50.0% | |
| GTGGGGGTGGATATGAGTAA+TGG | + | chr6_2:15251932-15251951 | None:intergenic | 50.0% | |
| TTGTAGGGCTTCTTTGGTGG+CGG | + | chr6_2:15252023-15252042 | None:intergenic | 50.0% | |
| !! | TAAACTGGTGGTGGAGGTGA+TGG | + | chr6_2:15252050-15252069 | None:intergenic | 50.0% |
| TTGTAGGGCTTCCTATGTGG+TGG | + | chr6_2:15252179-15252198 | None:intergenic | 50.0% | |
| ! | TATGGCTTCTTAGGTGGTGG+TGG | + | chr6_2:15252215-15252234 | None:intergenic | 50.0% |
| !! | TACTTGTAGACTGGTGGTGG+TGG | + | chr6_2:15252251-15252270 | None:intergenic | 50.0% |
| GGAAATCACACCTTGAGGTG+TGG | - | chr6_2:15252508-15252527 | Msa0910610:intron | 50.0% | |
| AACTTTGGTGGAGGTGGTGA+AGG | + | chr6_2:15251903-15251922 | None:intergenic | 50.0% | |
| GTGGGGGTGGATATGAGTAA+TGG | + | chr6_2:15251932-15251951 | None:intergenic | 50.0% | |
| TTGTAGGGCTTCTTTGGTGG+CGG | + | chr6_2:15252023-15252042 | None:intergenic | 50.0% | |
| !! | TAAACTGGTGGTGGAGGTGA+TGG | + | chr6_2:15252050-15252069 | None:intergenic | 50.0% |
| TTGTAGGGCTTCCTATGTGG+TGG | + | chr6_2:15252179-15252198 | None:intergenic | 50.0% | |
| ! | TATGGCTTCTTAGGTGGTGG+TGG | + | chr6_2:15252215-15252234 | None:intergenic | 50.0% |
| !! | TACTTGTAGACTGGTGGTGG+TGG | + | chr6_2:15252251-15252270 | None:intergenic | 50.0% |
| GGAAATCACACCTTGAGGTG+TGG | - | chr6_2:15252508-15252527 | Msa0910610:intron | 50.0% | |
| !!! | GGTTTTTTAGGAGGTGGGGG+TGG | + | chr6_2:15251945-15251964 | None:intergenic | 55.0% |
| ! | TAATAGGGTGTTCGACGCGG+TGG | + | chr6_2:15252095-15252114 | None:intergenic | 55.0% |
| ! | TAGTAGTAGGGTGTTCGGCG+TGG | + | chr6_2:15252140-15252159 | None:intergenic | 55.0% |
| AGTCACCACCACCACCACAT+AGG | - | chr6_2:15252165-15252184 | Msa0910610:intron | 55.0% | |
| TAGGGCTTCCTATGTGGTGG+TGG | + | chr6_2:15252176-15252195 | None:intergenic | 55.0% | |
| !! | TAGGTGGTGGTGGAGGAAAC+TGG | + | chr6_2:15252205-15252224 | None:intergenic | 55.0% |
| !! | TAGACTGGTGGTGGTGGAGA+TGG | + | chr6_2:15252245-15252264 | None:intergenic | 55.0% |
| TAGTAGTGGTAAGGGGGAGG+AGG | + | chr6_2:15252281-15252300 | None:intergenic | 55.0% | |
| !!! | GGTTTTTTAGGAGGTGGGGG+TGG | + | chr6_2:15251945-15251964 | None:intergenic | 55.0% |
| ! | TAATAGGGTGTTCGACGCGG+TGG | + | chr6_2:15252095-15252114 | None:intergenic | 55.0% |
| ! | TAGTAGTAGGGTGTTCGGCG+TGG | + | chr6_2:15252140-15252159 | None:intergenic | 55.0% |
| AGTCACCACCACCACCACAT+AGG | - | chr6_2:15252165-15252184 | Msa0910610:intron | 55.0% | |
| TAGGGCTTCCTATGTGGTGG+TGG | + | chr6_2:15252176-15252195 | None:intergenic | 55.0% | |
| !! | TAGGTGGTGGTGGAGGAAAC+TGG | + | chr6_2:15252205-15252224 | None:intergenic | 55.0% |
| !! | TAGACTGGTGGTGGTGGAGA+TGG | + | chr6_2:15252245-15252264 | None:intergenic | 55.0% |
| TAGTAGTGGTAAGGGGGAGG+AGG | + | chr6_2:15252281-15252300 | None:intergenic | 55.0% | |
| !! | TAGGGCTTCTTTGGTGGCGG+TGG | + | chr6_2:15252020-15252039 | None:intergenic | 60.0% |
| ! | TAGTAGGGTGTTCGGCGTGG+TGG | + | chr6_2:15252137-15252156 | None:intergenic | 60.0% |
| !! | GGCTTCCTATGTGGTGGTGG+TGG | + | chr6_2:15252173-15252192 | None:intergenic | 60.0% |
| !! | GGCTTCTTAGGTGGTGGTGG+AGG | + | chr6_2:15252212-15252231 | None:intergenic | 60.0% |
| !! | TAGGGCTTCTTTGGTGGCGG+TGG | + | chr6_2:15252020-15252039 | None:intergenic | 60.0% |
| ! | TAGTAGGGTGTTCGGCGTGG+TGG | + | chr6_2:15252137-15252156 | None:intergenic | 60.0% |
| !! | GGCTTCCTATGTGGTGGTGG+TGG | + | chr6_2:15252173-15252192 | None:intergenic | 60.0% |
| !! | GGCTTCTTAGGTGGTGGTGG+AGG | + | chr6_2:15252212-15252231 | None:intergenic | 60.0% |
| !! | TTCTTTGGTGGCGGTGGCGG+AGG | + | chr6_2:15252014-15252033 | None:intergenic | 65.0% |
| !! | GGCTTCTTTGGTGGCGGTGG+CGG | + | chr6_2:15252017-15252036 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGACGCGGTGG+TGG | + | chr6_2:15252092-15252111 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGGCGTGGTGG+TGG | + | chr6_2:15252134-15252153 | None:intergenic | 65.0% |
| !! | TTCTTTGGTGGCGGTGGCGG+AGG | + | chr6_2:15252014-15252033 | None:intergenic | 65.0% |
| !! | GGCTTCTTTGGTGGCGGTGG+CGG | + | chr6_2:15252017-15252036 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGACGCGGTGG+TGG | + | chr6_2:15252092-15252111 | None:intergenic | 65.0% |
| ! | TAGGGTGTTCGGCGTGGTGG+TGG | + | chr6_2:15252134-15252153 | None:intergenic | 65.0% |
| !! | GTTCGACGCGGTGGTGGTGG+TGG | + | chr6_2:15252086-15252105 | None:intergenic | 70.0% |
| ! | GGTGTTCGACGCGGTGGTGG+TGG | + | chr6_2:15252089-15252108 | None:intergenic | 70.0% |
| !! | GGTGTTCGGCGTGGTGGTGG+TGG | + | chr6_2:15252131-15252150 | None:intergenic | 70.0% |
| !! | GTTCGACGCGGTGGTGGTGG+TGG | + | chr6_2:15252086-15252105 | None:intergenic | 70.0% |
| ! | GGTGTTCGACGCGGTGGTGG+TGG | + | chr6_2:15252089-15252108 | None:intergenic | 70.0% |
| !! | GGTGTTCGGCGTGGTGGTGG+TGG | + | chr6_2:15252131-15252150 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 15251846 | 15253465 | 15251846 | ID=Msa0910610;Name=Msa0910610 |
| chr6_2 | mRNA | 15251846 | 15253465 | 15251846 | ID=Msa0910610-mRNA-1;Parent=Msa0910610;Name=Msa0910610-mRNA-1;_AED=0.40;_eAED=0.83;_QI=0|0|0.33|0.66|0.5|0.33|3|2|155 |
| chr6_2 | exon | 15251846 | 15251902 | 15251846 | ID=Msa0910610-mRNA-1:exon:3402;Parent=Msa0910610-mRNA-1 |
| chr6_2 | exon | 15253044 | 15253237 | 15253044 | ID=Msa0910610-mRNA-1:exon:3401;Parent=Msa0910610-mRNA-1 |
| chr6_2 | exon | 15253247 | 15253465 | 15253247 | ID=Msa0910610-mRNA-1:exon:3400;Parent=Msa0910610-mRNA-1 |
| chr6_2 | CDS | 15253247 | 15253465 | 15253247 | ID=Msa0910610-mRNA-1:cds;Parent=Msa0910610-mRNA-1 |
| chr6_2 | CDS | 15253044 | 15253237 | 15253044 | ID=Msa0910610-mRNA-1:cds;Parent=Msa0910610-mRNA-1 |
| chr6_2 | CDS | 15251848 | 15251902 | 15251848 | ID=Msa0910610-mRNA-1:cds;Parent=Msa0910610-mRNA-1 |
| chr6_2 | three_prime_UTR | 15251846 | 15251847 | 15251846 | ID=Msa0910610-mRNA-1:three_prime_utr;Parent=Msa0910610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
