AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0127210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127210 MtrunA17_Chr1g0191071 60.996 241 83 3 143 381 28 259 3.39e-79 249
Msa0127210 MtrunA17_Chr1g0191071 72.826 184 16 6 376 536 92 264 3.13e-61 202
Msa0127210 MtrunA17_Chr1g0191071 58.896 163 33 4 17 159 82 230 5.78e-37 137
Msa0127210 MtrunA17_Chr1g0191051 49.864 369 117 10 5 371 1 303 1.18e-77 247
Msa0127210 MtrunA17_Chr1g0191051 75.449 167 21 1 390 536 157 323 1.11e-72 234
Msa0127210 MtrunA17_Chr1g0191061 85.135 148 20 1 218 363 208 355 1.08e-62 210
Msa0127210 MtrunA17_Chr1g0191061 74.850 167 22 1 390 536 217 383 3.03e-62 209
Msa0127210 MtrunA17_Chr1g0191061 70.115 174 18 3 17 170 196 355 9.70e-54 186
Msa0127210 MtrunA17_Chr1g0191061 72.000 75 8 1 164 225 22 96 1.10e-24 105
Msa0127210 MtrunA17_Chr4g0045721 55.429 175 70 1 225 399 197 363 2.59e-55 190
Msa0127210 MtrunA17_Chr4g0045721 57.317 164 50 1 390 533 197 360 7.27e-55 189
Msa0127210 MtrunA17_Chr4g0045721 47.701 174 57 3 17 170 176 335 5.65e-42 154
Msa0127210 MtrunA17_Chr4g0045721 47.222 108 52 2 170 276 54 157 4.83e-17 82.8
Msa0127210 MtrunA17_Chr1g0205381 67.665 167 34 1 390 536 158 324 4.64e-52 180
Msa0127210 MtrunA17_Chr1g0205381 72.789 147 40 0 225 371 158 304 1.69e-49 173
Msa0127210 MtrunA17_Chr1g0205381 51.232 203 60 5 17 196 137 323 1.93e-35 135
Msa0127210 MtrunA17_Chr1g0205381 46.789 109 51 2 170 276 15 118 1.37e-17 84.0
Msa0127210 MtrunA17_Chr1g0191041 66.467 167 36 1 390 536 158 324 1.46e-50 176
Msa0127210 MtrunA17_Chr1g0191041 74.150 147 38 0 225 371 158 304 8.72e-50 174
Msa0127210 MtrunA17_Chr1g0191041 58.286 175 39 3 17 171 137 297 1.25e-37 141
Msa0127210 MtrunA17_Chr1g0191041 43.119 109 55 2 170 276 15 118 1.14e-16 81.3
Msa0127210 MtrunA17_Chr5g0394491 67.066 167 35 1 390 536 158 324 7.86e-50 174
Msa0127210 MtrunA17_Chr5g0394491 72.109 147 41 0 225 371 158 304 2.10e-47 167
Msa0127210 MtrunA17_Chr5g0394491 55.172 174 44 3 17 170 137 296 1.98e-34 132
Msa0127210 MtrunA17_Chr5g0394491 44.954 109 53 2 170 276 15 118 3.04e-18 85.9
Msa0127210 MtrunA17_Chr4g0045771 53.254 169 68 2 203 371 177 334 2.16e-49 174
Msa0127210 MtrunA17_Chr4g0045771 53.049 164 49 2 390 533 196 351 3.51e-48 171
Msa0127210 MtrunA17_Chr4g0045771 45.856 181 55 5 10 170 169 326 1.13e-36 139
Msa0127210 MtrunA17_Chr4g0045771 60.938 64 25 0 163 226 46 109 6.11e-17 82.4
Msa0127210 MtrunA17_Chr7g0248021 57.971 138 58 0 225 362 211 348 5.80e-44 160
Msa0127210 MtrunA17_Chr7g0248021 51.829 164 59 1 390 533 211 374 1.15e-43 159
Msa0127210 MtrunA17_Chr7g0248021 50.000 138 49 1 52 169 211 348 2.25e-31 125
Msa0127210 MtrunA17_Chr7g0248021 63.158 57 21 0 170 226 68 124 8.80e-15 76.3
Msa0127210 MtrunA17_Chr4g0045781 61.350 163 58 1 225 382 216 378 3.39e-43 158
Msa0127210 MtrunA17_Chr4g0045781 60.366 164 45 1 390 533 216 379 9.45e-43 157
Msa0127210 MtrunA17_Chr4g0045781 49.419 172 53 3 17 168 195 352 2.65e-30 122
Msa0127210 MtrunA17_Chr4g0045781 45.872 109 52 2 170 276 73 176 2.90e-17 84.0
Msa0127210 MtrunA17_Chr7g0254401 55.063 158 56 2 214 371 209 351 9.39e-33 129
Msa0127210 MtrunA17_Chr7g0254401 51.220 164 50 2 390 533 215 368 1.64e-32 128
Msa0127210 MtrunA17_Chr7g0254401 48.201 139 42 2 52 170 215 343 6.06e-20 91.7
Msa0127210 MtrunA17_Chr7g0254401 43.590 117 56 3 162 276 67 175 1.26e-17 84.7
Msa0127210 MtrunA17_Chr5g0446431 34.483 145 78 1 225 352 233 377 9.59e-20 91.7
Msa0127210 MtrunA17_Chr5g0446431 28.070 285 163 8 167 449 48 292 4.72e-19 89.7
Msa0127210 MtrunA17_Chr5g0446431 58.333 60 25 0 52 111 233 292 6.17e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127210 AT3G04940.1 67.683 164 47 1 200 363 139 296 1.72e-56 192
Msa0127210 AT3G04940.1 60.112 178 48 2 376 533 147 321 1.80e-53 184
Msa0127210 AT3G04940.1 61.871 139 33 1 52 170 158 296 4.13e-37 140
Msa0127210 AT3G04940.1 70.175 57 17 0 170 226 15 71 2.11e-19 89.7
Msa0127210 AT3G04940.2 67.683 164 47 1 200 363 139 296 1.72e-56 192
Msa0127210 AT3G04940.2 60.112 178 48 2 376 533 147 321 1.80e-53 184
Msa0127210 AT3G04940.2 61.871 139 33 1 52 170 158 296 4.13e-37 140
Msa0127210 AT3G04940.2 70.175 57 17 0 170 226 15 71 2.11e-19 89.7
Msa0127210 AT4G14880.5 61.202 183 44 3 376 536 144 321 2.52e-52 181
Msa0127210 AT4G14880.5 66.667 159 53 0 225 383 155 313 4.79e-51 177
Msa0127210 AT4G14880.5 54.335 173 45 3 17 169 134 292 2.10e-36 138
Msa0127210 AT4G14880.5 46.789 109 51 2 170 276 12 115 1.94e-19 89.7
Msa0127210 AT4G14880.3 61.202 183 44 3 376 536 144 321 2.52e-52 181
Msa0127210 AT4G14880.3 66.667 159 53 0 225 383 155 313 4.79e-51 177
Msa0127210 AT4G14880.3 54.335 173 45 3 17 169 134 292 2.10e-36 138
Msa0127210 AT4G14880.3 46.789 109 51 2 170 276 12 115 1.94e-19 89.7
Msa0127210 AT4G14880.4 61.202 183 44 3 376 536 144 321 2.52e-52 181
Msa0127210 AT4G14880.4 66.667 159 53 0 225 383 155 313 4.79e-51 177
Msa0127210 AT4G14880.4 54.335 173 45 3 17 169 134 292 2.10e-36 138
Msa0127210 AT4G14880.4 46.789 109 51 2 170 276 12 115 1.94e-19 89.7
Msa0127210 AT4G14880.2 61.202 183 44 3 376 536 144 321 2.52e-52 181
Msa0127210 AT4G14880.2 66.667 159 53 0 225 383 155 313 4.79e-51 177
Msa0127210 AT4G14880.2 54.335 173 45 3 17 169 134 292 2.10e-36 138
Msa0127210 AT4G14880.2 46.789 109 51 2 170 276 12 115 1.94e-19 89.7
Msa0127210 AT4G14880.1 61.202 183 44 3 376 536 144 321 2.52e-52 181
Msa0127210 AT4G14880.1 66.667 159 53 0 225 383 155 313 4.79e-51 177
Msa0127210 AT4G14880.1 54.335 173 45 3 17 169 134 292 2.10e-36 138
Msa0127210 AT4G14880.1 46.789 109 51 2 170 276 12 115 1.94e-19 89.7
Msa0127210 AT5G28020.5 66.460 161 49 1 227 382 73 233 4.17e-49 170
Msa0127210 AT5G28020.5 61.818 165 43 1 392 536 73 237 2.18e-46 162
Msa0127210 AT5G28020.5 60.714 140 35 1 52 171 71 210 3.11e-32 124
Msa0127210 AT3G22460.1 54.098 183 37 4 376 536 92 249 1.57e-48 169
Msa0127210 AT3G22460.1 57.862 159 47 1 225 383 103 241 3.33e-47 165
Msa0127210 AT3G22460.1 49.080 163 37 3 27 169 84 220 1.52e-33 128
Msa0127210 AT5G28020.2 75.182 137 34 0 227 363 159 295 2.95e-48 170
Msa0127210 AT5G28020.2 61.818 165 43 1 392 536 159 323 1.10e-45 163
Msa0127210 AT5G28020.2 60.714 140 35 1 52 171 157 296 1.28e-31 125
Msa0127210 AT5G28020.2 71.930 57 16 0 170 226 14 70 2.08e-20 92.8
Msa0127210 AT5G28020.2 52.174 69 12 1 5 52 1 69 3.15e-12 68.2
Msa0127210 AT5G28020.4 75.182 137 34 0 227 363 159 295 2.95e-48 170
Msa0127210 AT5G28020.4 61.818 165 43 1 392 536 159 323 1.10e-45 163
Msa0127210 AT5G28020.4 60.714 140 35 1 52 171 157 296 1.28e-31 125
Msa0127210 AT5G28020.4 71.930 57 16 0 170 226 14 70 2.08e-20 92.8
Msa0127210 AT5G28020.4 52.174 69 12 1 5 52 1 69 3.15e-12 68.2
Msa0127210 AT5G28020.1 75.182 137 34 0 227 363 159 295 2.95e-48 170
Msa0127210 AT5G28020.1 61.818 165 43 1 392 536 159 323 1.10e-45 163
Msa0127210 AT5G28020.1 60.714 140 35 1 52 171 157 296 1.28e-31 125
Msa0127210 AT5G28020.1 71.930 57 16 0 170 226 14 70 2.08e-20 92.8
Msa0127210 AT5G28020.1 52.174 69 12 1 5 52 1 69 3.15e-12 68.2
Msa0127210 AT5G28020.3 75.182 137 34 0 227 363 159 295 2.95e-48 170
Msa0127210 AT5G28020.3 61.818 165 43 1 392 536 159 323 1.10e-45 163
Msa0127210 AT5G28020.3 60.714 140 35 1 52 171 157 296 1.28e-31 125
Msa0127210 AT5G28020.3 71.930 57 16 0 170 226 14 70 2.08e-20 92.8
Msa0127210 AT5G28020.3 52.174 69 12 1 5 52 1 69 3.15e-12 68.2
Msa0127210 AT5G28020.6 75.182 137 34 0 227 363 159 295 2.95e-48 170
Msa0127210 AT5G28020.6 61.818 165 43 1 392 536 159 323 1.10e-45 163
Msa0127210 AT5G28020.6 60.714 140 35 1 52 171 157 296 1.28e-31 125
Msa0127210 AT5G28020.6 71.930 57 16 0 170 226 14 70 2.08e-20 92.8
Msa0127210 AT5G28020.6 52.174 69 12 1 5 52 1 69 3.15e-12 68.2
Msa0127210 AT2G43750.1 71.429 147 42 0 225 371 225 371 5.70e-48 171
Msa0127210 AT2G43750.1 64.634 164 38 1 390 533 225 388 9.82e-48 171
Msa0127210 AT2G43750.1 60.432 139 35 1 52 170 225 363 1.36e-32 129
Msa0127210 AT2G43750.1 43.590 117 56 3 162 276 77 185 1.83e-19 90.9
Msa0127210 AT2G43750.2 71.429 147 42 0 225 371 225 371 5.70e-48 171
Msa0127210 AT2G43750.2 64.634 164 38 1 390 533 225 388 9.82e-48 171
Msa0127210 AT2G43750.2 60.432 139 35 1 52 170 225 363 1.36e-32 129
Msa0127210 AT2G43750.2 43.590 117 56 3 162 276 77 185 1.83e-19 90.9
Msa0127210 AT5G28030.1 69.595 148 43 1 218 363 148 295 2.56e-47 167
Msa0127210 AT5G28030.1 60.606 165 45 1 392 536 159 323 3.53e-45 162
Msa0127210 AT5G28030.1 61.871 139 33 1 52 170 157 295 1.09e-30 122
Msa0127210 AT5G28030.1 68.750 64 19 1 170 232 14 77 3.32e-20 92.0
Msa0127210 AT5G28030.4 69.595 148 43 1 218 363 148 295 2.56e-47 167
Msa0127210 AT5G28030.4 60.606 165 45 1 392 536 159 323 3.53e-45 162
Msa0127210 AT5G28030.4 61.871 139 33 1 52 170 157 295 1.09e-30 122
Msa0127210 AT5G28030.4 68.750 64 19 1 170 232 14 77 3.32e-20 92.0
Msa0127210 AT5G28030.5 69.595 148 43 1 218 363 148 295 2.56e-47 167
Msa0127210 AT5G28030.5 60.606 165 45 1 392 536 159 323 3.53e-45 162
Msa0127210 AT5G28030.5 61.871 139 33 1 52 170 157 295 1.09e-30 122
Msa0127210 AT5G28030.5 68.750 64 19 1 170 232 14 77 3.32e-20 92.0
Msa0127210 AT5G28030.2 69.595 148 43 1 218 363 148 295 2.56e-47 167
Msa0127210 AT5G28030.2 60.606 165 45 1 392 536 159 323 3.53e-45 162
Msa0127210 AT5G28030.2 61.871 139 33 1 52 170 157 295 1.09e-30 122
Msa0127210 AT5G28030.2 68.750 64 19 1 170 232 14 77 3.32e-20 92.0
Msa0127210 AT3G59760.2 72.727 143 39 0 225 367 263 405 2.91e-47 171
Msa0127210 AT3G59760.2 52.571 175 49 3 17 171 242 402 7.21e-34 133
Msa0127210 AT3G59760.2 56.051 157 48 2 390 526 263 418 2.15e-30 124
Msa0127210 AT3G59760.2 45.299 117 54 3 162 276 115 223 7.70e-20 92.4
Msa0127210 AT3G59760.3 63.415 164 40 1 390 533 263 426 1.29e-46 169
Msa0127210 AT3G59760.3 69.388 147 45 0 225 371 263 409 1.90e-46 168
Msa0127210 AT3G59760.3 52.874 174 48 3 17 170 242 401 1.18e-33 133
Msa0127210 AT3G59760.3 45.299 117 54 3 162 276 115 223 4.27e-20 93.2
Msa0127210 AT3G59760.1 63.415 164 40 1 390 533 263 426 1.40e-46 169
Msa0127210 AT3G59760.1 69.388 147 45 0 225 371 263 409 2.11e-46 168
Msa0127210 AT3G59760.1 52.874 174 48 3 17 170 242 401 1.20e-33 133
Msa0127210 AT3G59760.1 45.299 117 54 3 162 276 115 223 4.66e-20 93.2
Msa0127210 AT3G61440.3 58.621 145 58 1 220 362 71 215 3.64e-45 159
Msa0127210 AT3G61440.3 52.381 168 58 2 388 533 74 241 4.86e-44 156
Msa0127210 AT3G61440.3 50.725 138 48 1 52 169 78 215 2.38e-31 122
Msa0127210 AT3G61440.2 58.621 145 58 1 220 362 96 240 9.29e-45 159
Msa0127210 AT3G61440.2 52.381 168 58 2 388 533 99 266 9.74e-44 156
Msa0127210 AT3G61440.2 50.725 138 48 1 52 169 103 240 5.45e-31 122
Msa0127210 AT3G61440.1 58.621 145 58 1 220 362 192 336 4.75e-44 160
Msa0127210 AT3G61440.1 52.381 168 58 2 388 533 195 362 6.86e-43 157
Msa0127210 AT3G61440.1 50.725 138 48 1 52 169 199 336 1.93e-30 122
Msa0127210 AT3G61440.1 58.621 58 24 0 169 226 55 112 6.41e-15 77.0
Msa0127210 AT3G61440.4 55.372 121 52 1 220 338 192 312 1.14e-33 130
Msa0127210 AT3G61440.4 50.877 114 52 2 388 499 195 306 4.72e-24 103
Msa0127210 AT3G61440.4 52.336 107 49 1 52 158 199 303 1.66e-23 102
Msa0127210 AT3G61440.4 58.621 58 24 0 169 226 55 112 8.50e-15 76.3
Msa0127210 AT3G03630.1 51.807 166 50 2 390 535 249 404 5.88e-33 130
Msa0127210 AT3G03630.1 61.151 139 44 1 225 363 249 377 1.88e-32 129
Msa0127210 AT3G03630.1 49.640 139 40 2 52 170 249 377 4.04e-18 87.0
Msa0127210 AT3G03630.1 46.154 117 53 3 162 276 101 209 1.50e-17 85.5
Msa0127210 AT5G28030.3 66.990 103 32 1 218 318 148 250 2.68e-31 122
Msa0127210 AT5G28030.3 68.889 90 28 0 392 481 159 248 9.30e-29 115
Msa0127210 AT5G28030.3 69.565 92 28 0 52 143 157 248 1.68e-26 108
Msa0127210 AT5G28030.3 68.750 64 19 1 170 232 14 77 2.06e-20 91.7
Msa0127210 AT5G28030.3 52.174 69 12 1 5 52 1 69 9.95e-11 62.8
Msa0127210 AT1G55880.2 26.712 292 159 9 167 449 44 289 1.65e-18 87.4
Msa0127210 AT1G55880.2 39.326 89 48 1 23 111 207 289 3.22e-14 74.7
Msa0127210 AT1G55880.2 29.333 150 82 2 201 326 199 348 7.17e-14 73.6
Msa0127210 AT1G55880.1 26.712 292 159 9 167 449 44 289 4.07e-18 87.0
Msa0127210 AT1G55880.1 28.977 176 101 2 201 352 199 374 5.79e-18 86.7
Msa0127210 AT1G55880.1 39.326 89 48 1 23 111 207 289 4.69e-14 74.7
Msa0127210 AT3G22460.2 59.649 57 23 0 170 226 15 71 4.79e-16 77.0

Find 154 sgRNAs with CRISPR-Local

Find 1285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTGTCTCTCCAAATTTC+AGG 0.120422 1_3:+56453401 None:intergenic
TTACTCTTGTGGAGAAAATT+TGG 0.168603 1_3:+56441459 None:intergenic
AGACCACTGGCCCTGAAATT+TGG 0.229438 1_3:-56453412 Msa0127210:CDS
TGCTTTGAAAGAAGGTTTAC+TGG 0.278057 1_3:-56452219 Msa0127210:intron
TGGTTGATTGTGAAGTTAAT+AGG 0.287955 1_3:-56464186 Msa0127210:intron
AATCAGTAATATACCTTTGC+AGG 0.289736 1_3:+56444961 None:intergenic
TTGGTTGCAGGGATAGGAAC+TGG 0.301174 1_3:-56453362 Msa0127210:CDS
AGACCACTGGCCCTGAGATT+TGG 0.302016 1_3:-56444309 Msa0127210:CDS
AGACCACTGGCCCTGAGATT+TGG 0.302016 1_3:-56462637 Msa0127210:CDS
TCTCCTAGATGAAGTTATTC+AGG 0.311315 1_3:-56443798 Msa0127210:intron
TCTCCTAGATGAAGTTATTC+AGG 0.311315 1_3:-56452903 Msa0127210:intron
TCTTCTAGATGAAGTTATTC+AGG 0.311475 1_3:-56462046 Msa0127210:intron
AGAATTGATGCTTTGGTTGC+AGG 0.319930 1_3:-56453374 Msa0127210:CDS
AAAATTGATGCTTTGGTTGC+AGG 0.319930 1_3:-56462599 Msa0127210:CDS
AATATTCATACCTTTATCTC+TGG 0.339879 1_3:+56462521 None:intergenic
ATTGAAGATGCCGAAAATAA+TGG 0.348920 1_3:-56454436 Msa0127210:CDS
AGAATTGATGCTATGGTTGC+AGG 0.356402 1_3:-56444271 Msa0127210:CDS
TGGTATCATTCCTCCTGTTC+TGG 0.360071 1_3:-56462076 Msa0127210:CDS
TAATCAGTAATTACCTTTCC+AGG 0.365883 1_3:+56454403 None:intergenic
TGGAGGGAAAATTGATGCTT+TGG 0.373019 1_3:-56462606 Msa0127210:CDS
GAATGACAACGTTTGGAGTT+TGG 0.377931 1_3:-56441596 Msa0127210:three_prime_UTR
CCAGTGTCTCTCCAAATCTC+AGG 0.381632 1_3:+56444298 None:intergenic
ACTTTGTGAATGACAACGTT+TGG 0.384734 1_3:-56441603 Msa0127210:three_prime_UTR
ATGGTTGCAGGGATAGGAAC+TGG 0.396969 1_3:-56444259 Msa0127210:CDS
GGTTGATTGTGAAGTTAATA+GGG 0.397612 1_3:-56464185 Msa0127210:intron
GACTTTCCTCCATTCAGAAC+TGG 0.398595 1_3:+56462402 None:intergenic
AAATTAGTAACTACCTTTCC+CGG 0.398806 1_3:+56463902 None:intergenic
AGGTGTTGGGAAGTTTCTTA+AGG 0.398952 1_3:-56462552 Msa0127210:CDS
CCAGAGTCTCTCCAAATCTC+AGG 0.400543 1_3:+56462626 None:intergenic
TTGCAGATGGGAATTTCATC+AGG 0.417954 1_3:-56442016 Msa0127210:intron
TTGCAGATGGGAATTTCATC+AGG 0.417954 1_3:-56451934 Msa0127210:intron
TTGCAGATGGGAATTTCATC+AGG 0.417954 1_3:-56461305 Msa0127210:intron
TTCTTCAGCTTCACGCCTGA+TGG 0.420313 1_3:+56441720 None:intergenic
TGGAGGGAGAATTGATGCTT+TGG 0.420775 1_3:-56453381 Msa0127210:CDS
ATTGAAGATGCCGAAAATAA+AGG 0.422995 1_3:-56444994 Msa0127210:CDS
GGAACTGGAGGAACAGTAAC+AGG 0.423268 1_3:-56462572 Msa0127210:CDS
ATTGAAGATGCTGAGAATAA+AGG 0.425340 1_3:-56463935 Msa0127210:CDS
TTGGTTGCAGGGATAGGAAC+TGG 0.425930 1_3:-56462587 Msa0127210:CDS
CAGTACCGATCCCTTGGATT+AGG 0.432171 1_3:+56452954 None:intergenic
AAGCTGCTTGCTTTGAAAGA+AGG 0.434359 1_3:-56452227 Msa0127210:CDS
CTTGCTGCAGTGTCAAAGAT+AGG 0.444641 1_3:-56454584 Msa0127210:intron
ATATTCATACCTTTATCTCT+GGG 0.457708 1_3:+56462522 None:intergenic
GAATTGATGCTTTGGTTGCA+GGG 0.460383 1_3:-56453373 Msa0127210:CDS
TGATACCAGCACCGATCCCT+TGG 0.461638 1_3:+56462091 None:intergenic
AGAAGATCAACTTCCAGAAC+AGG 0.462745 1_3:+56462063 None:intergenic
CGACACCAGTACCGATCCCT+TGG 0.468770 1_3:+56452948 None:intergenic
TTGGTCTCAAAGAACTTGTT+AGG 0.473667 1_3:-56441509 Msa0127210:three_prime_UTR
AAATTGATGCTTTGGTTGCA+GGG 0.474338 1_3:-56462598 Msa0127210:CDS
GCAGCAGCAGCAATAAAACT+AGG 0.476121 1_3:-56451904 Msa0127210:CDS
TTCAAAATTGCACTTTCAGT+TGG 0.477799 1_3:+56444049 None:intergenic
GGAGAGAAACTTAGATATCA+AGG 0.483692 1_3:-56444203 Msa0127210:intron
GGAGAGAAACTTAGATATCA+AGG 0.483692 1_3:-56453306 Msa0127210:intron
CGACACCATTACCGATACCT+TGG 0.483706 1_3:+56443843 None:intergenic
TGGTTGCAGGGATAGGAACT+GGG 0.484341 1_3:-56453361 Msa0127210:CDS
AATAATGGCTTCATTACTCC+TGG 0.484664 1_3:-56454421 Msa0127210:CDS
GCTGCTGCTGCAATTAAACT+AGG 0.486688 1_3:-56461275 Msa0127210:CDS
GTTCTGAATGGAGGAAAGTC+AGG 0.487757 1_3:-56462399 Msa0127210:intron
CATCTAGGAGATCAAGATCC+AGG 0.490366 1_3:+56443810 None:intergenic
CATCTAGGAGATCAAGATCC+AGG 0.490366 1_3:+56452915 None:intergenic
CTACCTGAATAACTTCATCT+AGG 0.491918 1_3:+56443795 None:intergenic
CAGTGTCTCTCCAAATTTCA+GGG 0.492933 1_3:+56453402 None:intergenic
CTACCTGAATAACTTCATCT+AGG 0.495279 1_3:+56452900 None:intergenic
CGAATCCAAGGGATCGGTGC+TGG 0.495485 1_3:-56462096 Msa0127210:CDS
CTAATCCAAGGGATCGGTAC+TGG 0.496016 1_3:-56452953 Msa0127210:CDS
CCAATCACCGTTAAAAGTAA+TGG 0.496678 1_3:+56441528 None:intergenic
CTAATCCAAGGTATCGGTAA+TGG 0.499930 1_3:-56443848 Msa0127210:CDS
GATGCTTTGGTTGCAGGGAT+AGG 0.501960 1_3:-56453368 Msa0127210:CDS
GATGCTTTGGTTGCAGGGAT+AGG 0.501960 1_3:-56462593 Msa0127210:CDS
AATTTCCCGCCCTAGGTGTA+TGG 0.501992 1_3:-56444079 Msa0127210:intron
CCTGAGATTTGGAGAGACTC+TGG 0.503327 1_3:-56462626 Msa0127210:CDS
TGGTTAATTAATAGAAGAGC+AGG 0.504064 1_3:-56445643 Msa0127210:intron
GCAGCAGCTGCAATAAAACT+AGG 0.508019 1_3:-56441986 Msa0127210:CDS
TGGTTGCAGGGATAGGAACT+GGG 0.513253 1_3:-56444258 Msa0127210:CDS
TTCAGAACTGGACTTTCAGT+TGG 0.514744 1_3:+56462414 None:intergenic
AAGTAACGCTCTCCAAAACT+AGG 0.515786 1_3:+56441763 None:intergenic
TTCAGAATTGCACTTTCAGT+TGG 0.524548 1_3:+56453153 None:intergenic
GAGGAACAGTAACAGGTGTT+GGG 0.527424 1_3:-56462565 Msa0127210:CDS
AATAAAGGTCTCATTACTCC+GGG 0.527860 1_3:-56463920 Msa0127210:CDS
ACTGAAAGTGCAATTCTGAA+TGG 0.530942 1_3:-56453150 Msa0127210:CDS
TAGACTCATTATGAGACCAC+TGG 0.531764 1_3:-56444322 Msa0127210:CDS
TAGACTCATTATGAGACCAC+TGG 0.531764 1_3:-56453425 Msa0127210:CDS
TAGATTCATTATGAGACCAC+TGG 0.531764 1_3:-56462650 Msa0127210:CDS
GGAGGAACAGTAACAGGTGT+TGG 0.532217 1_3:-56462566 Msa0127210:CDS
AAAGGCAATCATCGAATCCA+AGG 0.533837 1_3:-56462108 Msa0127210:intron
ATTCTGAATGGAGGAAAGCC+AGG 0.537366 1_3:-56453138 Msa0127210:intron
GATGCTATGGTTGCAGGGAT+AGG 0.541893 1_3:-56444265 Msa0127210:CDS
GAATAAAGGTCTCATTACTC+CGG 0.542326 1_3:-56463921 Msa0127210:CDS
TCTTTCTTGATTGCACATTG+TGG 0.545196 1_3:+56464347 None:intergenic
TATCTAAACAACATAACAGA+AGG 0.549223 1_3:-56464147 Msa0127210:CDS
AGGAGATCAAGATCCAGGAC+AGG 0.551186 1_3:+56443815 None:intergenic
AGGAGATCAAGATCCAGGAC+AGG 0.551186 1_3:+56452920 None:intergenic
ACTGAAAGTCCAGTTCTGAA+TGG 0.553938 1_3:-56462411 Msa0127210:CDS
TATCTAAACAACATTACAGA+AGG 0.556044 1_3:-56454648 Msa0127210:CDS
TCTCCAAATCTCAGGGCCAG+TGG 0.561794 1_3:+56444306 None:intergenic
TCTCACTCAGGATAGCATTG+AGG 0.568555 1_3:-56445020 Msa0127210:intron
GCCTTCTTCATCAGATAACA+TGG 0.569337 1_3:-56464372 Msa0127210:intron
AGGTCTCATTACTCCGGGAA+AGG 0.571702 1_3:-56463915 Msa0127210:intron
GGGAAGAGACCAGAAAATGT+AGG 0.573068 1_3:-56461254 Msa0127210:CDS
GGGAAGAGACAAGAAAATGC+AGG 0.574537 1_3:-56441965 Msa0127210:CDS
GGGAAGAGACAAGAAAATGC+AGG 0.574537 1_3:-56451883 Msa0127210:CDS
AAAGGCAAACACCTAATCCA+AGG 0.576831 1_3:-56452965 Msa0127210:intron
CTGCTGCTGCAATTAAACTA+GGG 0.577119 1_3:-56461274 Msa0127210:CDS
TCTCCAAATTTCAGGGCCAG+TGG 0.578326 1_3:+56453409 None:intergenic
GAATTGATGCTATGGTTGCA+GGG 0.579525 1_3:-56444270 Msa0127210:CDS
TGGAGGGAGAATTGATGCTA+TGG 0.582379 1_3:-56444278 Msa0127210:CDS
CAGCAGCAGCAATAAAACTA+GGG 0.582566 1_3:-56451903 Msa0127210:CDS
CAGCAGCTGCAATAAAACTA+GGG 0.584186 1_3:-56441985 Msa0127210:CDS
TATCTAAGTTTCTCTCCTTG+AGG 0.585770 1_3:+56444209 None:intergenic
TATCTAAGTTTCTCTCCTTG+AGG 0.585770 1_3:+56453312 None:intergenic
TGGCTTCATTACTCCTGGAA+AGG 0.588930 1_3:-56454416 Msa0127210:intron
CAGTGTCTCTCCAAATCTCA+GGG 0.596061 1_3:+56444299 None:intergenic
CCTGAGATTTGGAGAGACAC+TGG 0.596193 1_3:-56444298 Msa0127210:CDS
TCTCCAAATCTCAGGGCCAG+TGG 0.596982 1_3:+56462634 None:intergenic
GTTAACAGGGAACACACCAT+TGG 0.598353 1_3:-56454673 Msa0127210:CDS
GTTAATAGGGAACACACCAT+TGG 0.598353 1_3:-56464172 Msa0127210:CDS
AAAGGCGAACATCTAATCCA+AGG 0.601059 1_3:-56443860 Msa0127210:intron
GAACATCTAATCCAAGGTAT+CGG 0.603211 1_3:-56443854 Msa0127210:CDS
CCTGAAATTTGGAGAGACAC+TGG 0.603528 1_3:-56453401 Msa0127210:CDS
AGGTCTCATTACTCCTGCAA+AGG 0.603893 1_3:-56444974 Msa0127210:intron
GAGATTTGGAGAGACTCTGG+AGG 0.605051 1_3:-56462623 Msa0127210:CDS
AATCATCGAATCCAAGGGAT+CGG 0.608426 1_3:-56462102 Msa0127210:CDS
CAGAGTCTCTCCAAATCTCA+GGG 0.609348 1_3:+56462627 None:intergenic
CGTTCAAATTCATGTCTGCA+TGG 0.614879 1_3:+56441553 None:intergenic
GGGGAACAATAACAGGTGCT+GGG 0.617812 1_3:-56444237 Msa0127210:CDS
GGGGAACAATAACAGGTGCT+GGG 0.617812 1_3:-56453340 Msa0127210:CDS
AGTCATTCTCATTCAAGCTG+TGG 0.622200 1_3:-56441658 Msa0127210:three_prime_UTR
GGAGATCAAGATCCAGGACA+GGG 0.624998 1_3:+56443816 None:intergenic
GGAGATCAAGATCCAGGACA+GGG 0.624998 1_3:+56452921 None:intergenic
AGATCAACTTCCAGAACAGG+AGG 0.628629 1_3:+56462066 None:intergenic
AAGGCAAACACCTAATCCAA+GGG 0.643306 1_3:-56452964 Msa0127210:CDS
GAAAGTGCAATTCTGAATGG+AGG 0.649334 1_3:-56453147 Msa0127210:CDS
GAAAGTCCAGTTCTGAATGG+AGG 0.649334 1_3:-56462408 Msa0127210:CDS
AAACACCTAATCCAAGGGAT+CGG 0.651827 1_3:-56452959 Msa0127210:CDS
ATGTTGTTTAGATATACCAA+TGG 0.652489 1_3:+56464156 None:intergenic
AAGGCAATCATCGAATCCAA+GGG 0.655977 1_3:-56462107 Msa0127210:CDS
AGATTTGGAGAGACACTGGA+GGG 0.656101 1_3:-56444294 Msa0127210:CDS
ATCTAAACAACATAACAGAA+GGG 0.656707 1_3:-56464146 Msa0127210:intron
GAAATTTGGAGAGACACTGG+AGG 0.657808 1_3:-56453398 Msa0127210:CDS
AGATCAAGATCCAGGACAGG+GGG 0.659611 1_3:+56443818 None:intergenic
AGATCAAGATCCAGGACAGG+GGG 0.659611 1_3:+56452923 None:intergenic
GAGATTTGGAGAGACACTGG+AGG 0.660104 1_3:-56444295 Msa0127210:CDS
AGGTGCTGGGAAGTTCCTCA+AGG 0.662577 1_3:-56444224 Msa0127210:CDS
AGGTGCTGGGAAGTTCCTCA+AGG 0.662577 1_3:-56453327 Msa0127210:CDS
ATCTAAACAACATTACAGAA+GGG 0.663527 1_3:-56454647 Msa0127210:CDS
AGATTTGGAGAGACTCTGGA+GGG 0.665402 1_3:-56462622 Msa0127210:CDS
GGTTGCAGGGATAGGAACTG+GGG 0.673121 1_3:-56453360 Msa0127210:CDS
GAGATCAAGATCCAGGACAG+GGG 0.676210 1_3:+56443817 None:intergenic
GAGATCAAGATCCAGGACAG+GGG 0.676210 1_3:+56452922 None:intergenic
AAATTTGGAGAGACACTGGA+GGG 0.678031 1_3:-56453397 Msa0127210:CDS
ATGTTGTTTAGATATACCAA+TGG 0.681506 1_3:+56454657 None:intergenic
GGTTGCAGGGATAGGAACTG+GGG 0.681938 1_3:-56444257 Msa0127210:CDS
GTTGCAGGGATAGGAACTGG+AGG 0.696987 1_3:-56462584 Msa0127210:CDS
GTTGCAGGGATAGGAACTGG+GGG 0.729118 1_3:-56453359 Msa0127210:CDS
GTTGCAGGGATAGGAACTGG+GGG 0.736279 1_3:-56444256 Msa0127210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATTAAAAAAAAT+CGG + chr1_3:56445311-56445330 None:intergenic 0.0%
!!! ATTATATTTTTATTTTATTA+GGG + chr1_3:56462771-56462790 None:intergenic 0.0%
!!! AATTATATTTTTATTTTATT+AGG + chr1_3:56462772-56462791 None:intergenic 0.0%
!!! ATAATAATAATTTTGTTGTT+TGG - chr1_3:56441676-56441695 Msa0127210:three_prime_UTR 10.0%
!! AAATATTAAAGAATGAAATT+CGG + chr1_3:56443689-56443708 None:intergenic 10.0%
!!! GAATTTTTTTTTTTTTTTGA+AGG - chr1_3:56444092-56444111 Msa0127210:intron 10.0%
!! AACTAAATAATTACATATAA+TGG - chr1_3:56444754-56444773 Msa0127210:intron 10.0%
!!! TTTTTGCTTATATAAAAAAT+TGG + chr1_3:56447943-56447962 None:intergenic 10.0%
!! AAAAAAAAAAAAAATACAAG+TGG + chr1_3:56448420-56448439 None:intergenic 10.0%
!! AATATAAAAACTTATATCAT+AGG + chr1_3:56451568-56451587 None:intergenic 10.0%
!!! ACTATTTTTAGAAAAAAATT+GGG + chr1_3:56453260-56453279 None:intergenic 10.0%
!!! TTAATATTATTTGAGTTTAA+TGG - chr1_3:56453782-56453801 Msa0127210:intron 10.0%
!! TAATAATAATTAAAATAAGC+GGG + chr1_3:56456897-56456916 None:intergenic 10.0%
!! TTAGTAAAAATAATCAAAAT+AGG + chr1_3:56457553-56457572 None:intergenic 10.0%
!!! TTTTGATTATTTTTACTAAA+TGG - chr1_3:56457554-56457573 Msa0127210:intron 10.0%
!!! TTTTGTTTTAGTTTTTTTTA+TGG - chr1_3:56459223-56459242 Msa0127210:intron 10.0%
!! ATTTAGTAAAATAATACTAT+CGG - chr1_3:56459328-56459347 Msa0127210:intron 10.0%
!!! AAGTTGTATTTTTATTTTTA+CGG + chr1_3:56462837-56462856 None:intergenic 10.0%
!! ACAAAAAAAAAAAAAACATT+TGG - chr1_3:56463628-56463647 Msa0127210:intron 10.0%
!! CAAAAAAAAAAAAAACATTT+GGG - chr1_3:56463629-56463648 Msa0127210:intron 10.0%
!! ACATGTCAATATAATATTAT+TGG + chr1_3:56441463-56441482 None:intergenic 15.0%
!!! AACATATTAGTAAATTTTGA+AGG + chr1_3:56443976-56443995 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGAAGGAA+TGG - chr1_3:56444097-56444116 Msa0127210:intron 15.0%
!! AAAAGACATTCATATATAAT+TGG + chr1_3:56444559-56444578 None:intergenic 15.0%
!! TGTATTATATATGTAAAAGT+AGG - chr1_3:56446971-56446990 Msa0127210:intron 15.0%
!! GAATGAATGTTTAAAAAATT+TGG - chr1_3:56447305-56447324 Msa0127210:intron 15.0%
!! AAAAAAAAAAATATGCAACT+TGG - chr1_3:56447960-56447979 Msa0127210:intron 15.0%
!!! TAAATTTTTGGACATAAATA+TGG - chr1_3:56448350-56448369 Msa0127210:intron 15.0%
!!! TATTAAAAAGTCATATTTTG+TGG + chr1_3:56448509-56448528 None:intergenic 15.0%
!!! ATCCTGTATTTTTTTTTTTA+AGG - chr1_3:56448563-56448582 Msa0127210:intron 15.0%
!! TTCCTTAAAAAAAAAAATAC+AGG + chr1_3:56448568-56448587 None:intergenic 15.0%
!! AAACAAAACAAAAAAAATAC+AGG + chr1_3:56450589-56450608 None:intergenic 15.0%
!! GTTTAGTAAAATAATACTAT+CGG - chr1_3:56448618-56448637 Msa0127210:intron 15.0%
!! GTGGATAATAATAATAATTA+AGG + chr1_3:56450841-56450860 None:intergenic 15.0%
!! ATCATTACAAATTCTTAATT+AGG + chr1_3:56451389-56451408 None:intergenic 15.0%
!! TTTCTCATTATCATTATATA+CGG + chr1_3:56451895-56451914 None:intergenic 15.0%
!!! AGTTTAATCTTTTTAAACAA+TGG - chr1_3:56452085-56452104 Msa0127210:intron 15.0%
!! TGAAAAATTCAATCAATAAA+TGG + chr1_3:56452883-56452902 None:intergenic 15.0%
!!! CTATTTTTAGAAAAAAATTG+GGG + chr1_3:56453259-56453278 None:intergenic 15.0%
!!! GACTATTTTTAGAAAAAAAT+TGG + chr1_3:56453261-56453280 None:intergenic 15.0%
!! AATGATAAGATAAATATCTT+CGG + chr1_3:56453283-56453302 None:intergenic 15.0%
!!! ATTCATTTTTCTATTTATCT+TGG - chr1_3:56454670-56454689 Msa0127210:CDS 15.0%
!!! TTCATTTTTCTATTTATCTT+GGG - chr1_3:56454671-56454690 Msa0127210:CDS 15.0%
!!! ACAATTTATTTAAAATTCAG+AGG + chr1_3:56455865-56455884 None:intergenic 15.0%
!!! TTTCGACAATATATTTTTAA+AGG - chr1_3:56457614-56457633 Msa0127210:intron 15.0%
!!! AAGGTTTTTATTATGATTTT+CGG - chr1_3:56457633-56457652 Msa0127210:intron 15.0%
!!! ATGGCTTTTATTTTAATTTT+CGG - chr1_3:56457669-56457688 Msa0127210:intron 15.0%
!!! TTTTTGCTTCTATAAAAAAT+CGG + chr1_3:56458547-56458566 None:intergenic 15.0%
!! AAAAAAAAGTCATATTAACT+TGG - chr1_3:56458563-56458582 Msa0127210:intron 15.0%
!!! TTAGTTAGTTTTTTCTTTTT+TGG - chr1_3:56458756-56458775 Msa0127210:intron 15.0%
!!! TTGAATTATTTTTTTTCCAA+CGG + chr1_3:56459132-56459151 None:intergenic 15.0%
!!! TATTAAAAAGTCATATTTTG+TGG + chr1_3:56448509-56448528 None:intergenic 15.0%
!! AACTAAAACAAAAAAAAAAC+AGG + chr1_3:56459216-56459235 None:intergenic 15.0%
!!! TATACTTTTTGAAAAGAAAT+TGG - chr1_3:56459583-56459602 Msa0127210:intron 15.0%
!! AAAAAAATTCAAAAACAATC+AGG + chr1_3:56459819-56459838 None:intergenic 15.0%
!!! TGATTGTTTTTGAATTTTTT+TGG - chr1_3:56459818-56459837 Msa0127210:intron 15.0%
!!! CTTTAAAAAGAAAAACTATT+AGG + chr1_3:56459986-56460005 None:intergenic 15.0%
!! ATATTAGTAATTTCATTCAT+AGG - chr1_3:56460263-56460282 Msa0127210:intron 15.0%
!!! GAAATTTTATTTTTAAGTCT+TGG + chr1_3:56461053-56461072 None:intergenic 15.0%
!! AAAAATAAAATTTCTAACAC+TGG - chr1_3:56461059-56461078 Msa0127210:intron 15.0%
!! TGTTAATAATATTTGAGTAA+TGG - chr1_3:56462682-56462701 Msa0127210:intron 15.0%
!! CTCATTACAAATTCTTAATT+AGG + chr1_3:56441890-56441909 None:intergenic 20.0%
!! CTATTCCTTATAAAATTTGT+TGG - chr1_3:56442058-56442077 Msa0127210:intron 20.0%
!!! CTTTACCAACAAATTTTATA+AGG + chr1_3:56442066-56442085 None:intergenic 20.0%
!!! TATAAAATTTGTTGGTAAAG+TGG - chr1_3:56442066-56442085 Msa0127210:intron 20.0%
!!! ATAAAATTTGTTGGTAAAGT+GGG - chr1_3:56442067-56442086 Msa0127210:intron 20.0%
!!! CTTTCAGTTTTTTCAATTTT+CGG + chr1_3:56442339-56442358 None:intergenic 20.0%
!! ACTATTACTATTACAGATTT+AGG + chr1_3:56442665-56442684 None:intergenic 20.0%
!!! AGTCTAATCTTTTTAAACAA+TGG - chr1_3:56442856-56442875 Msa0127210:intron 20.0%
!! TGATTGAACATATAACTATT+AGG + chr1_3:56443108-56443127 None:intergenic 20.0%
!! ACAATTCATATTTCCTAATA+TGG - chr1_3:56443161-56443180 Msa0127210:intron 20.0%
!!! TTATTGTTATTCACTTGAAT+TGG - chr1_3:56443631-56443650 Msa0127210:intron 20.0%
!!! TTGAAATACTTTTGTATGTT+AGG + chr1_3:56444460-56444479 None:intergenic 20.0%
!! TTAAACTCTTAATATTTGTC+AGG - chr1_3:56444533-56444552 Msa0127210:intron 20.0%
!! TAAGTTTATGTCACAAATAA+TGG - chr1_3:56444665-56444684 Msa0127210:intron 20.0%
!!! TAATTTATGTCCTTATTTCT+AGG - chr1_3:56444792-56444811 Msa0127210:intron 20.0%
!! TTAGTTTATTCCTAGAAATA+AGG + chr1_3:56444805-56444824 None:intergenic 20.0%
!!! TTTGTTGAATAATAACGTTT+TGG - chr1_3:56445157-56445176 Msa0127210:intron 20.0%
!!! ATATTCTTTTTTCACTAATG+TGG + chr1_3:56445288-56445307 None:intergenic 20.0%
!!! TTTATATATTTTGCGTTGTT+CGG - chr1_3:56445329-56445348 Msa0127210:intron 20.0%
!!! TATCTAAAATCAATTGTTGA+AGG - chr1_3:56445931-56445950 Msa0127210:intron 20.0%
!!! ATCTAAAATCAATTGTTGAA+GGG - chr1_3:56445932-56445951 Msa0127210:intron 20.0%
!!! AAAATAGAGAATGCTATTTT+TGG - chr1_3:56446076-56446095 Msa0127210:intron 20.0%
!!! AAATAGAGAATGCTATTTTT+GGG - chr1_3:56446077-56446096 Msa0127210:intron 20.0%
!!! TAGTAATGGTTTAGTTTTTT+TGG + chr1_3:56446185-56446204 None:intergenic 20.0%
!!! ATTTTGCAAACAATTCATTT+TGG - chr1_3:56446449-56446468 Msa0127210:intron 20.0%
!! TATATATTGTTAGATCTATG+TGG + chr1_3:56446600-56446619 None:intergenic 20.0%
!!! TTTTTTTTCTTCTCAAAACA+CGG - chr1_3:56447095-56447114 Msa0127210:intron 20.0%
!!! TTTTTATTCTAACAATGAGT+GGG + chr1_3:56447185-56447204 None:intergenic 20.0%
!! ACATAAAGAGATAGAAAAAT+TGG - chr1_3:56447241-56447260 Msa0127210:intron 20.0%
!! TAATCATAACTAATACTCTT+AGG + chr1_3:56447989-56448008 None:intergenic 20.0%
!! GTATTAGTTATGATTATTCA+AGG - chr1_3:56447993-56448012 Msa0127210:intron 20.0%
!!! TGAAGAAGTATCTAAATTTT+TGG - chr1_3:56448338-56448357 Msa0127210:intron 20.0%
!! AAAACAACTTATGTAAAATG+CGG + chr1_3:56449856-56449875 None:intergenic 20.0%
!!! TTTTGTTGATTTATTCTGAA+CGG + chr1_3:56450071-56450090 None:intergenic 20.0%
!! ATTGTATTTCAAACTCAAAT+TGG - chr1_3:56450359-56450378 Msa0127210:intron 20.0%
!! TAAAGTACAAAATGATACTT+TGG + chr1_3:56450871-56450890 None:intergenic 20.0%
!! TTAATTCTTCCTTACAAAAT+CGG - chr1_3:56451592-56451611 Msa0127210:intron 20.0%
!! TTAAAAGAGTCAATAAAAAG+CGG + chr1_3:56451640-56451659 None:intergenic 20.0%
!! ATAGCATATCATGATAAAAA+CGG - chr1_3:56451768-56451787 Msa0127210:intron 20.0%
!! AGTAACATAAATCATAAACT+TGG + chr1_3:56452683-56452702 None:intergenic 20.0%
!!! CTTCTTTTAACAAATTATGA+AGG + chr1_3:56453121-56453140 None:intergenic 20.0%
!!! CATAATTTGTTAAAAGAAGA+TGG - chr1_3:56453122-56453141 Msa0127210:intron 20.0%
!! CTTTCATTCTTAAAAAGTTA+TGG - chr1_3:56453523-56453542 Msa0127210:intron 20.0%
!! TTAGATAACAAATAACTGAA+AGG + chr1_3:56453738-56453757 None:intergenic 20.0%
!!! TAAATTTTTTATAGTGCCAA+TGG + chr1_3:56453821-56453840 None:intergenic 20.0%
!! TATTGCAAAATTCAAAGTAA+TGG + chr1_3:56454368-56454387 None:intergenic 20.0%
!!! AAGAAAGTAAGTTATTTCAA+AGG + chr1_3:56454429-56454448 None:intergenic 20.0%
!!! TTTATATATTTTGCGTTGTT+CGG - chr1_3:56445329-56445348 Msa0127210:intron 20.0%
!!! TCTAAAATCAATATTGTTGA+AGG - chr1_3:56455107-56455126 Msa0127210:intron 20.0%
!!! GAATTTCTGTTAGTAATTTT+GGG + chr1_3:56455374-56455393 None:intergenic 20.0%
!!! GTATATATTTTAGATCTATG+TGG + chr1_3:56455402-56455421 None:intergenic 20.0%
!! ACTATTGAAGTTAAGATTAA+TGG - chr1_3:56455454-56455473 Msa0127210:intron 20.0%
!!! AAAACGGAATTATTTCTAAA+GGG - chr1_3:56455904-56455923 Msa0127210:intron 20.0%
!! ATTAAAAGGTTACGAATTAA+CGG - chr1_3:56455964-56455983 Msa0127210:intron 20.0%
!!! ATATCTCTAATGATCATTTT+TGG + chr1_3:56456792-56456811 None:intergenic 20.0%
!! TATGTCAGTATTTACTAAAA+TGG - chr1_3:56456937-56456956 Msa0127210:intron 20.0%
!! ATGTCAGTATTTACTAAAAT+GGG - chr1_3:56456938-56456957 Msa0127210:intron 20.0%
!! TACTTGTGATTTATAAAGTA+GGG - chr1_3:56457042-56457061 Msa0127210:intron 20.0%
!!! AATTTTCAATTGAGTTTTGA+CGG - chr1_3:56457205-56457224 Msa0127210:intron 20.0%
!!! ATGTATGTTTTTGAAAATTG+CGG - chr1_3:56457275-56457294 Msa0127210:intron 20.0%
!! AACAAAGTGTAAAACATTTA+GGG + chr1_3:56457425-56457444 None:intergenic 20.0%
!! AAACAAAGTGTAAAACATTT+AGG + chr1_3:56457426-56457445 None:intergenic 20.0%
!!! TTTCGGCAATATATTTTTAA+TGG - chr1_3:56457650-56457669 Msa0127210:intron 20.0%
!!! TTTTCGGCAATTTATTTTAA+AGG - chr1_3:56457685-56457704 Msa0127210:intron 20.0%
!! AAGTGATAAATATGATAAGT+TGG + chr1_3:56447839-56447858 None:intergenic 20.0%
!!! TATTTATTTCTTTTGTCTAG+TGG - chr1_3:56458468-56458487 Msa0127210:intron 20.0%
!!! TTAAGTTTTCCTTATATTCA+AGG - chr1_3:56458908-56458927 Msa0127210:intron 20.0%
!!! ATAAAAATAAAAAGTACGAG+CGG + chr1_3:56459063-56459082 None:intergenic 20.0%
!! TTTATAAATATGCGTAAAAC+AGG + chr1_3:56459542-56459561 None:intergenic 20.0%
!! TATTTCAAAGCTATAACAAA+TGG - chr1_3:56459611-56459630 Msa0127210:intron 20.0%
!! ATTTCCAAAAAAGAAAAAAG+TGG + chr1_3:56459643-56459662 None:intergenic 20.0%
!! AAGAAATTACTCTAACAATT+TGG - chr1_3:56459866-56459885 Msa0127210:intron 20.0%
!!! CTATTTTTTCAAAAACAATG+AGG + chr1_3:56459945-56459964 None:intergenic 20.0%
!! TAAAAAACTATCACACAAAA+TGG - chr1_3:56460106-56460125 Msa0127210:intron 20.0%
!! TTCATCTTAACAAGAATTTA+AGG - chr1_3:56460140-56460159 Msa0127210:intron 20.0%
!!! TCTTTTTTTTGTTTTTGGTA+AGG + chr1_3:56460206-56460225 None:intergenic 20.0%
!!! TCTTGTCTTTTTTTTGTTTT+TGG + chr1_3:56460211-56460230 None:intergenic 20.0%
!! AAAAAGACAAGATATTCAAT+TGG - chr1_3:56460219-56460238 Msa0127210:intron 20.0%
!! AATTCATTGTGAAGTTAATA+GGG - chr1_3:56460636-56460655 Msa0127210:intron 20.0%
!!! ATTAATCAAGTTTGATAACT+AGG - chr1_3:56460941-56460960 Msa0127210:intron 20.0%
!! ATGAATTATGAAAATACCTT+TGG + chr1_3:56461477-56461496 None:intergenic 20.0%
!! ATAATTCATATTGCCTAATT+TGG - chr1_3:56461488-56461507 Msa0127210:intron 20.0%
!! AGAAATTAATCATAAGTTTC+TGG + chr1_3:56462158-56462177 None:intergenic 20.0%
!! ATCTTTCATTCTTAAAAGTT+AGG - chr1_3:56462424-56462443 Msa0127210:CDS 20.0%
!! TCTTTCATTCTTAAAAGTTA+GGG - chr1_3:56462425-56462444 Msa0127210:CDS 20.0%
!! AATATCTTTATCAATCTTCT+AGG - chr1_3:56462863-56462882 Msa0127210:intron 20.0%
!!! ACTATTTTATACGATAAGTA+TGG - chr1_3:56463018-56463037 Msa0127210:intron 20.0%
!! ATGTAGAATCTAATATGTTA+AGG - chr1_3:56463093-56463112 Msa0127210:intron 20.0%
!! AAAAAAGGAAAAGAGAAAAA+AGG - chr1_3:56463183-56463202 Msa0127210:intron 20.0%
!! AAAAAGGAAAAGAGAAAAAA+GGG - chr1_3:56463184-56463203 Msa0127210:intron 20.0%
!! AAAGAAGAAAAACTAAGAAA+AGG - chr1_3:56463222-56463241 Msa0127210:intron 20.0%
!!! TAAAATTTTTGTAGTACCAA+TGG + chr1_3:56463724-56463743 None:intergenic 20.0%
!! GAAAAGTAATTAGAGTTTAA+CGG + chr1_3:56463824-56463843 None:intergenic 20.0%
!! ATGTTGTTTAGATATACCAA+TGG + chr1_3:56441729-56441748 None:intergenic 25.0%
! TATCTAAACAACATAACAGA+AGG - chr1_3:56441735-56441754 Msa0127210:CDS 25.0%
! ATCTAAACAACATAACAGAA+GGG - chr1_3:56441736-56441755 Msa0127210:CDS 25.0%
!! ATTTGTCAAGTTTGATAACT+AGG - chr1_3:56441999-56442018 Msa0127210:CDS 25.0%
! CTAGGTTCTTATATCATATT+AGG - chr1_3:56442017-56442036 Msa0127210:intron 25.0%
! TCATATTAGGTTCTTATACT+TGG - chr1_3:56442030-56442049 Msa0127210:intron 25.0%
!!! TAAAATTTGTTGGTAAAGTG+GGG - chr1_3:56442068-56442087 Msa0127210:intron 25.0%
!! TTTTGATCTCATAATAAGAG+TGG + chr1_3:56442098-56442117 None:intergenic 25.0%
! CGAAAATTGAAAAAACTGAA+AGG - chr1_3:56442337-56442356 Msa0127210:intron 25.0%
! AAATTGAAAAAACTGAAAGG+TGG - chr1_3:56442340-56442359 Msa0127210:intron 25.0%
! AGTTAAGTAGTTATAAGAGA+AGG - chr1_3:56442522-56442541 Msa0127210:intron 25.0%
!! AGTCTATAAAGCATTATTAG+AGG + chr1_3:56442592-56442611 None:intergenic 25.0%
! ACTATTACAGATTTAGGTAT+CGG + chr1_3:56442659-56442678 None:intergenic 25.0%
! ATGAAAATCTCAATTAAACG+CGG + chr1_3:56442749-56442768 None:intergenic 25.0%
! GATATGAACAATACTATATG+TGG + chr1_3:56442815-56442834 None:intergenic 25.0%
!! AAAAACACCTTTTATTCCTT+TGG + chr1_3:56443055-56443074 None:intergenic 25.0%
! TAAAGTAACGACCAATTAAT+CGG + chr1_3:56443214-56443233 None:intergenic 25.0%
! ATATTCATACCTTTATCTCT+GGG + chr1_3:56443363-56443382 None:intergenic 25.0%
! AATATTCATACCTTTATCTC+TGG + chr1_3:56443364-56443383 None:intergenic 25.0%
! ACCATTTGTAAACATTTCAA+AGG - chr1_3:56443756-56443775 Msa0127210:intron 25.0%
!!! AAATTTTGAAGGTTTCACTT+AGG + chr1_3:56443965-56443984 None:intergenic 25.0%
! CTTTGATTCTTGAAAAGTTA+TGG - chr1_3:56444070-56444089 Msa0127210:intron 25.0%
! TATTCCTTGTGTATATATAG+AGG - chr1_3:56444708-56444727 Msa0127210:intron 25.0%
! CAGTCCTTAATAAGTTTATT+AGG - chr1_3:56444869-56444888 Msa0127210:intron 25.0%
! ATTATTACTTAATGTTGTGC+AGG - chr1_3:56444962-56444981 Msa0127210:intron 25.0%
! CAAATGACATTTGATTGAAA+TGG - chr1_3:56445055-56445074 Msa0127210:intron 25.0%
!!! ACCTAATGTTTTCAAGTTTA+GGG + chr1_3:56445429-56445448 None:intergenic 25.0%
!!! AACCTAATGTTTTCAAGTTT+AGG + chr1_3:56445430-56445449 None:intergenic 25.0%
!!! ATTCACTTTTCTATTTATCG+TGG - chr1_3:56445481-56445500 Msa0127210:intron 25.0%
!!! TTCACTTTTCTATTTATCGT+GGG - chr1_3:56445482-56445501 Msa0127210:intron 25.0%
! TAAAAAAGCTCTTTCTTGAT+GGG + chr1_3:56445578-56445597 None:intergenic 25.0%
! ATAAAAAAGCTCTTTCTTGA+TGG + chr1_3:56445579-56445598 None:intergenic 25.0%
! AAGTACAATATGCATGTATT+TGG - chr1_3:56445823-56445842 Msa0127210:intron 25.0%
!! TCTAAAATCAATTGTTGAAG+GGG - chr1_3:56445933-56445952 Msa0127210:intron 25.0%
!!! ATGGTTTAGTTTTTTTGGTT+CGG + chr1_3:56446180-56446199 None:intergenic 25.0%
! AGTTTCAGAACTATTAGTAA+TGG + chr1_3:56446199-56446218 None:intergenic 25.0%
! TATGTAACACTTGTATATAG+AGG + chr1_3:56446514-56446533 None:intergenic 25.0%
!! GTAATAAGGTTAGTTAGAAT+TGG + chr1_3:56446548-56446567 None:intergenic 25.0%
!!! AAGTAATTTTGGGAGTAATA+AGG + chr1_3:56446562-56446581 None:intergenic 25.0%
!! GACTTTCTGTAAGTAATTTT+GGG + chr1_3:56446572-56446591 None:intergenic 25.0%
! ACTATTGAAGTTAAGATTGA+TGG - chr1_3:56446665-56446684 Msa0127210:intron 25.0%
!!! ACCAAACATGTTTTGATATA+CGG - chr1_3:56446731-56446750 Msa0127210:intron 25.0%
! GAAGGGAGTAAAATATAATT+TGG - chr1_3:56446782-56446801 Msa0127210:intron 25.0%
! GGAGTAAAATATAATTTGGA+TGG - chr1_3:56446786-56446805 Msa0127210:intron 25.0%
!! AATTTTCCACTTATTTACCT+TGG - chr1_3:56447006-56447025 Msa0127210:intron 25.0%
!! ATTTTACCAAGGTAAATAAG+TGG + chr1_3:56447015-56447034 None:intergenic 25.0%
!! TGATAGTTACAATTTTACCA+AGG + chr1_3:56447026-56447045 None:intergenic 25.0%
!!! GTTTTTTTTTCTTGTCAAGT+AGG + chr1_3:56447050-56447069 None:intergenic 25.0%
!! CTTTTTATTCTAACAATGAG+TGG + chr1_3:56447186-56447205 None:intergenic 25.0%
! CACTCATTGTTAGAATAAAA+AGG - chr1_3:56447184-56447203 Msa0127210:intron 25.0%
! TCTAACATGATAGTTGTAAT+TGG - chr1_3:56447362-56447381 Msa0127210:intron 25.0%
! TGAAGAGTTACTATACTATT+CGG + chr1_3:56447430-56447449 None:intergenic 25.0%
! TGATAAGTTTATGATGTGAT+AGG + chr1_3:56447827-56447846 None:intergenic 25.0%
! CTCTATTTATTTATGTCTAG+TGG - chr1_3:56447861-56447880 Msa0127210:intron 25.0%
!! GCAATTTTCAATTATCTATC+TGG + chr1_3:56448133-56448152 None:intergenic 25.0%
!! TGTTAGGAACTTTTAATAGT+TGG + chr1_3:56448160-56448179 None:intergenic 25.0%
!!! TTTTCCATGTGTTATTATGA+AGG - chr1_3:56448281-56448300 Msa0127210:intron 25.0%
!!! CCTTGAATGATTTTTTCTAA+CGG + chr1_3:56448486-56448505 None:intergenic 25.0%
! ACTATAGTAGAAAGTTAGTT+AGG - chr1_3:56448693-56448712 Msa0127210:intron 25.0%
! CTATAGTAGAAAGTTAGTTA+GGG - chr1_3:56448694-56448713 Msa0127210:intron 25.0%
! TATAGTAGAAAGTTAGTTAG+GGG - chr1_3:56448695-56448714 Msa0127210:intron 25.0%
! GTAGCTTATTTATAGTGATT+TGG + chr1_3:56448731-56448750 None:intergenic 25.0%
! AAAGATATGAAATAGTGCAT+AGG + chr1_3:56448755-56448774 None:intergenic 25.0%
!! ATTGTTCAAATTCGTTGATT+TGG + chr1_3:56449216-56449235 None:intergenic 25.0%
!! ATTCTTGTTCCAATTTTCAA+AGG - chr1_3:56449730-56449749 Msa0127210:intron 25.0%
!! AAATCAGCTTTTCTAATATG+TGG + chr1_3:56449827-56449846 None:intergenic 25.0%
!! GCATTTTACATAAGTTGTTT+TGG - chr1_3:56449855-56449874 Msa0127210:intron 25.0%
! AACACATTTCGAAACAAAAT+TGG + chr1_3:56449945-56449964 None:intergenic 25.0%
!!! GATTTTGGTATAATCTGTTA+TGG - chr1_3:56450043-56450062 Msa0127210:intron 25.0%
! ATTAGGGTAAAACTAGTAAA+TGG + chr1_3:56450299-56450318 None:intergenic 25.0%
! GAAGCAACTAAGTAAAATTA+GGG + chr1_3:56450315-56450334 None:intergenic 25.0%
! TGAAGCAACTAAGTAAAATT+AGG + chr1_3:56450316-56450335 None:intergenic 25.0%
! AATAAACTAGAGTTACTTAG+TGG - chr1_3:56448668-56448687 Msa0127210:intron 25.0%
! GTAGCTTATTTATAGTGATT+TGG + chr1_3:56448731-56448750 None:intergenic 25.0%
! ATTCATTTCTATCTTTGTGA+TGG - chr1_3:56448776-56448795 Msa0127210:intron 25.0%
!!! AAGTGACACTTATTTTGAAA+CGG + chr1_3:56450741-56450760 None:intergenic 25.0%
!!! TAGTAAAAGTATCGTATCTT+TGG - chr1_3:56450935-56450954 Msa0127210:intron 25.0%
!! TTTTTCATTGTGAAGTTAAC+AGG - chr1_3:56451195-56451214 Msa0127210:intron 25.0%
!! TTTTCATTGTGAAGTTAACA+GGG - chr1_3:56451196-56451215 Msa0127210:intron 25.0%
!! ATGTTGTTTAGATATACCAA+TGG + chr1_3:56441729-56441748 None:intergenic 25.0%
! TATCTAAACAACATTACAGA+AGG - chr1_3:56451234-56451253 Msa0127210:intron 25.0%
! ATCTAAACAACATTACAGAA+GGG - chr1_3:56451235-56451254 Msa0127210:intron 25.0%
!! AGTAATGAAGCCATTATTTT+CGG + chr1_3:56451459-56451478 None:intergenic 25.0%
!! ATTAGTCAAGTTTGATAACT+AGG - chr1_3:56451498-56451517 Msa0127210:intron 25.0%
! TTTACTATTAGATTAGAGGT+CGG + chr1_3:56451708-56451727 None:intergenic 25.0%
! TGACTTTACTATTAGATTAG+AGG + chr1_3:56451712-56451731 None:intergenic 25.0%
! ATCATAATCATAGTATACGT+TGG - chr1_3:56451794-56451813 Msa0127210:intron 25.0%
! TTTATGCAACTATATACTGT+TGG + chr1_3:56451863-56451882 None:intergenic 25.0%
! TGTCTCTCTTAATTAATCAT+CGG - chr1_3:56451966-56451985 Msa0127210:intron 25.0%
! ATATAGTATTGTTCATGTTG+TGG - chr1_3:56452045-56452064 Msa0127210:intron 25.0%
! ATAGTTCATATTGCCTAATT+TGG - chr1_3:56452390-56452409 Msa0127210:intron 25.0%
! TTCATTTGCACAAATTTCAA+AGG - chr1_3:56452899-56452918 Msa0127210:intron 25.0%
! TAATACTAGCTACAAATACA+AGG - chr1_3:56453565-56453584 Msa0127210:intron 25.0%
! AATACTAGCTACAAATACAA+GGG - chr1_3:56453566-56453585 Msa0127210:intron 25.0%
!! TAACTTGTGATTCTTGTTAT+TGG - chr1_3:56444274-56444293 Msa0127210:CDS 25.0%
! TTTGTTGAATAATAACGTTC+TGG - chr1_3:56454331-56454350 Msa0127210:intron 25.0%
! TAAAAAAGCTCTTTCTTGAT+GGG + chr1_3:56445578-56445597 None:intergenic 25.0%
! ATAAAAAAGCTCTTTCTTGA+TGG + chr1_3:56445579-56445598 None:intergenic 25.0%
! TCTCAATGAAACAGTTTATT+GGG - chr1_3:56455203-56455222 Msa0127210:intron 25.0%
! GAATGTAACACTTGTATATA+AGG + chr1_3:56455282-56455301 None:intergenic 25.0%
! GAATTGGTCAAATTATGTTA+TGG + chr1_3:56446532-56446551 None:intergenic 25.0%
!!! AGTAATTTTGGGAGTAATAA+GGG + chr1_3:56446561-56446580 None:intergenic 25.0%
!!! TAGTAATTTTGGGAGTAATA+AGG + chr1_3:56455364-56455383 None:intergenic 25.0%
!! GGAATTTCTGTTAGTAATTT+TGG + chr1_3:56455375-56455394 None:intergenic 25.0%
! AACTTTGTAAATACAAACCA+AGG - chr1_3:56455511-56455530 Msa0127210:intron 25.0%
! TGCAAACAAATTAAAAAGCA+AGG - chr1_3:56455571-56455590 Msa0127210:intron 25.0%
!!! AAATATTCCGCTCTAAAAAA+TGG - chr1_3:56455597-56455616 Msa0127210:intron 25.0%
! ATATATATACACACACACAT+AGG + chr1_3:56455645-56455664 None:intergenic 25.0%
!! ACTGAAGTAATATGTTTTAC+AGG - chr1_3:56455810-56455829 Msa0127210:intron 25.0%
! ATTCAGAGGAATATTACAAA+GGG + chr1_3:56455851-56455870 None:intergenic 25.0%
! AATTCAGAGGAATATTACAA+AGG + chr1_3:56455852-56455871 None:intergenic 25.0%
! AAATAAATTGTCGTATCAGT+TGG - chr1_3:56455874-56455893 Msa0127210:intron 25.0%
!!! CAAAACGGAATTATTTCTAA+AGG - chr1_3:56455903-56455922 Msa0127210:intron 25.0%
! TACGAACTTGAGAAATTAAA+AGG - chr1_3:56455950-56455969 Msa0127210:intron 25.0%
! TTAATAAGCTGTTCATGAAT+GGG - chr1_3:56456433-56456452 Msa0127210:intron 25.0%
!! AAATCTATATCCGATTTGAA+GGG + chr1_3:56456598-56456617 None:intergenic 25.0%
! ATTCCGATTAATAATGAACT+CGG - chr1_3:56456624-56456643 Msa0127210:intron 25.0%
! TTTCCGAGTTCATTATTAAT+CGG + chr1_3:56456630-56456649 None:intergenic 25.0%
! TGTCAGTATTTACTAAAATG+GGG - chr1_3:56456939-56456958 Msa0127210:intron 25.0%
! ATCATCGTTATATAAGTTCA+AGG - chr1_3:56456988-56457007 Msa0127210:intron 25.0%
! TCACCCAATTTAATTATACT+CGG - chr1_3:56457011-56457030 Msa0127210:intron 25.0%
! AAGCCGAGTATAATTAAATT+GGG + chr1_3:56457017-56457036 None:intergenic 25.0%
! CTACTTGTGATTTATAAAGT+AGG - chr1_3:56457041-56457060 Msa0127210:intron 25.0%
! ACTTGTGATTTATAAAGTAG+GGG - chr1_3:56457043-56457062 Msa0127210:intron 25.0%
!! ATTTGATTGTGTGAAGTTTT+TGG - chr1_3:56457080-56457099 Msa0127210:intron 25.0%
!!! TACAAAATTTTGCTATGTTG+TGG - chr1_3:56457103-56457122 Msa0127210:intron 25.0%
!!! AGTTTTGACGGTAAATATTT+TGG - chr1_3:56457217-56457236 Msa0127210:intron 25.0%
! TTGAAGTATACCTATTTGAT+TGG - chr1_3:56457751-56457770 Msa0127210:intron 25.0%
! GTATATACTTCCAATCAAAT+AGG + chr1_3:56457764-56457783 None:intergenic 25.0%
!! CGGATTATTAGAATTTTAGA+CGG - chr1_3:56457816-56457835 Msa0127210:intron 25.0%
! CTTAAACAGGATTAAAATCT+TGG - chr1_3:56458187-56458206 Msa0127210:intron 25.0%
! TGGAAATGTTAAAATTACAG+AGG - chr1_3:56458207-56458226 Msa0127210:intron 25.0%
! GAATGAGTATAGAAAATCAA+GGG + chr1_3:56458388-56458407 None:intergenic 25.0%
! AGAATGAGTATAGAAAATCA+AGG + chr1_3:56458389-56458408 None:intergenic 25.0%
! TAATCATAACCAATACTCTT+AGG + chr1_3:56458592-56458611 None:intergenic 25.0%
!!! TGCTACTTTTCTTAATATCA+TGG + chr1_3:56458829-56458848 None:intergenic 25.0%
!!! ATTGAAAGTTGATGTATAAG+TGG + chr1_3:56448452-56448471 None:intergenic 25.0%
! TCAATAAAAAAATTTGCCGT+TGG - chr1_3:56459113-56459132 Msa0127210:intron 25.0%
!!! TTAGTTTTTTTTATGGTGTC+CGG - chr1_3:56459230-56459249 Msa0127210:intron 25.0%
! ATAAAATCAGTGACATTAAC+TGG - chr1_3:56459557-56459576 Msa0127210:intron 25.0%
!!! ATGTCCACTTTTTTCTTTTT+TGG - chr1_3:56459636-56459655 Msa0127210:intron 25.0%
! AGAGTACATTTCTTGTTAAA+AGG + chr1_3:56459677-56459696 None:intergenic 25.0%
! AGAAATGTACTCTAACAATT+TGG - chr1_3:56459684-56459703 Msa0127210:intron 25.0%
! AAAGACAACATATGAAAAGT+AGG - chr1_3:56460175-56460194 Msa0127210:intron 25.0%
! CAATTCATTGTGAAGTTAAT+AGG - chr1_3:56460635-56460654 Msa0127210:intron 25.0%
! ATGTTGTTAAGATATACCAA+TGG + chr1_3:56460668-56460687 None:intergenic 25.0%
! TATCTTAACAACATTACAGA+AGG - chr1_3:56460674-56460693 Msa0127210:intron 25.0%
! ATCTTAACAACATTACAGAA+GGG - chr1_3:56460675-56460694 Msa0127210:intron 25.0%
!!! AACTTTAGTTTGTGATATAG+AGG + chr1_3:56460773-56460792 None:intergenic 25.0%
!!! AGTAATGAGACCTTTATTTT+CGG + chr1_3:56460901-56460920 None:intergenic 25.0%
! ATAGACTTCAACATTATAAG+CGG + chr1_3:56461111-56461130 None:intergenic 25.0%
! AACATGAACAATACTATATG+TGG + chr1_3:56452044-56452063 None:intergenic 25.0%
! ATATAGTATTGTTCATGTTG+TGG - chr1_3:56452045-56452064 Msa0127210:intron 25.0%
! TGATTGAGCATATAACTATT+AGG + chr1_3:56461435-56461454 None:intergenic 25.0%
!!! GACATTTTTTATATGACATC+AGG + chr1_3:56461914-56461933 None:intergenic 25.0%
! AATAGTAAAGAGCTACATTT+AGG + chr1_3:56462259-56462278 None:intergenic 25.0%
! ATTAACAAGATGCATATTTG+CGG + chr1_3:56462669-56462688 None:intergenic 25.0%
! TGCACACATGTAAAAATAAA+AGG - chr1_3:56462910-56462929 Msa0127210:intron 25.0%
! CTAATATGTTAAGGAGAATT+TGG - chr1_3:56463102-56463121 Msa0127210:intron 25.0%
! ATCAAAGAAAGAAGAAGAAA+AGG - chr1_3:56463258-56463277 Msa0127210:intron 25.0%
! AGAAAAGAAAGAAGAAGAAA+AGG - chr1_3:56463371-56463390 Msa0127210:intron 25.0%
!! AGTAACATAAAAGTGCATTA+TGG + chr1_3:56463770-56463789 None:intergenic 25.0%
AACTGTCATTAAGTGAAGTT+TGG - chr1_3:56441394-56441413 Msa0127210:three_prime_UTR 30.0%
ACAAGTTAAAACAAGGAGAT+TGG + chr1_3:56441438-56441457 None:intergenic 30.0%
ATTGGACACAAGTTAAAACA+AGG + chr1_3:56441445-56441464 None:intergenic 30.0%
TGGTTGATTGTGAAGTTAAT+AGG - chr1_3:56441696-56441715 Msa0127210:exon 30.0%
GGTTGATTGTGAAGTTAATA+GGG - chr1_3:56441697-56441716 Msa0127210:exon 30.0%
ATTGAAGATGCTGAGAATAA+AGG - chr1_3:56441947-56441966 Msa0127210:intron 30.0%
AAATTAGTAACTACCTTTCC+CGG + chr1_3:56441983-56442002 None:intergenic 30.0%
!! AAAATTTGTTGGTAAAGTGG+GGG - chr1_3:56442069-56442088 Msa0127210:intron 30.0%
! CATTCTATTACTGATTGATC+TGG - chr1_3:56442142-56442161 Msa0127210:intron 30.0%
AGATTGTAGATCTATGTGAA+TGG - chr1_3:56442263-56442282 Msa0127210:intron 30.0%
! GAATTGTATTTCTGTGTACA+TGG + chr1_3:56442445-56442464 None:intergenic 30.0%
!! GTTAATTAGCTTGTTCTAGT+TGG + chr1_3:56442499-56442518 None:intergenic 30.0%
!! TTTGTTTTCAACTTACGACT+TGG - chr1_3:56442626-56442645 Msa0127210:intron 30.0%
! TATTACAGATTTAGGTATCG+GGG + chr1_3:56442657-56442676 None:intergenic 30.0%
CTATTACAGATTTAGGTATC+GGG + chr1_3:56442658-56442677 None:intergenic 30.0%
! TTCTGCATACAGATTTTACA+TGG - chr1_3:56442697-56442716 Msa0127210:intron 30.0%
! ACAGATTTTACATGGACAAT+TGG - chr1_3:56442705-56442724 Msa0127210:intron 30.0%
! CAGATTTTACATGGACAATT+GGG - chr1_3:56442706-56442725 Msa0127210:intron 30.0%
!!! AAAAGGTGTTTTTGAGAAAG+CGG - chr1_3:56443062-56443081 Msa0127210:intron 30.0%
ATGAATTGTGACAATACCTT+TGG + chr1_3:56443150-56443169 None:intergenic 30.0%
AAAAAACTGAGCCGATTAAT+TGG - chr1_3:56443200-56443219 Msa0127210:intron 30.0%
! TGATTCTGAGTGTTTCTTTT+TGG - chr1_3:56443514-56443533 Msa0127210:intron 30.0%
TATGACGTCGAAACAAAAAT+TGG + chr1_3:56443657-56443676 None:intergenic 30.0%
!! GCCTTTGAAATGTTTACAAA+TGG + chr1_3:56443760-56443779 None:intergenic 30.0%
TCTTCTAGATGAAGTTATTC+AGG - chr1_3:56443836-56443855 Msa0127210:CDS 30.0%
AATACTAGCTGCTAATACAA+GGG - chr1_3:56444140-56444159 Msa0127210:intron 30.0%
! ATATGAATGTCTTTTGCAGA+TGG - chr1_3:56444564-56444583 Msa0127210:intron 30.0%
! TATGAATGTCTTTTGCAGAT+GGG - chr1_3:56444565-56444584 Msa0127210:intron 30.0%
ACAAGGAATAACAATGAGAA+AGG + chr1_3:56444698-56444717 None:intergenic 30.0%
GTAACCTCTATATATACACA+AGG + chr1_3:56444715-56444734 None:intergenic 30.0%
GTGTATATATAGAGGTTACA+AGG - chr1_3:56444716-56444735 Msa0127210:intron 30.0%
TGCGCCTAATAAACTTATTA+AGG + chr1_3:56444876-56444895 None:intergenic 30.0%
CTTATAAGTGCAGAATTGTA+AGG - chr1_3:56444912-56444931 Msa0127210:intron 30.0%
GCTAAAATCAACTAATGCAA+GGG + chr1_3:56445234-56445253 None:intergenic 30.0%
ACCCTAAACTTGAAAACATT+AGG - chr1_3:56445425-56445444 Msa0127210:intron 30.0%
AAAAAAGCTCTTTCTTGATG+GGG + chr1_3:56445577-56445596 None:intergenic 30.0%
ATCAAAAGTCTTCCTAACAA+TGG + chr1_3:56445652-56445671 None:intergenic 30.0%
! TTAGGAAGACTTTTGATGTA+AGG - chr1_3:56445655-56445674 Msa0127210:intron 30.0%
AACAGTAGTATAAGAATCGA+TGG + chr1_3:56445693-56445712 None:intergenic 30.0%
! ATCGATTCTTATACTACTGT+TGG - chr1_3:56445692-56445711 Msa0127210:intron 30.0%
TCGATTCTTATACTACTGTT+GGG - chr1_3:56445693-56445712 Msa0127210:intron 30.0%
!! GTTTTCAGTCAAAGTGTTAT+GGG - chr1_3:56445877-56445896 Msa0127210:intron 30.0%
TGTTATGGGATAAACTTGAA+GGG - chr1_3:56445891-56445910 Msa0127210:intron 30.0%
GCAATTTCATAAGTTATGCA+TGG - chr1_3:56445955-56445974 Msa0127210:intron 30.0%
ACAGAATATACAAGTAGATG+CGG - chr1_3:56446127-56446146 Msa0127210:intron 30.0%
!!! TTAGTTTTTTTGGTTCGGTT+TGG + chr1_3:56446175-56446194 None:intergenic 30.0%
TGGCACCAATAATAACAATT+CGG - chr1_3:56446343-56446362 Msa0127210:intron 30.0%
! CTGAACCGAATTGTTATTAT+TGG + chr1_3:56446351-56446370 None:intergenic 30.0%
GAAATGCAAATAGTTCAGTT+TGG - chr1_3:56446414-56446433 Msa0127210:intron 30.0%
!!! GCAAACAATTCATTTTGGTT+CGG - chr1_3:56446454-56446473 Msa0127210:intron 30.0%
TAACACTTGTATATAGAGGT+GGG + chr1_3:56446510-56446529 None:intergenic 30.0%
! GGACTTTCTGTAAGTAATTT+TGG + chr1_3:56446573-56446592 None:intergenic 30.0%
GATAGAAATTATCACCCATA+TGG - chr1_3:56446692-56446711 Msa0127210:intron 30.0%
AAACATGTTTGGTAAGATGA+TGG + chr1_3:56446724-56446743 None:intergenic 30.0%
!!! CCAAACATGTTTTGATATAC+GGG - chr1_3:56446732-56446751 Msa0127210:intron 30.0%
AACTTTGTCAATACAAACCA+AGG - chr1_3:56446760-56446779 Msa0127210:intron 30.0%
! TTATATTTTACTCCCTTCCT+TGG + chr1_3:56446780-56446799 None:intergenic 30.0%
! GTTTTTGCAGTTTTCACTTT+GGG + chr1_3:56446880-56446899 None:intergenic 30.0%
! AGTTTTTGCAGTTTTCACTT+TGG + chr1_3:56446881-56446900 None:intergenic 30.0%
AAAACTGCAAAAACTGCATT+TGG - chr1_3:56446886-56446905 Msa0127210:intron 30.0%
ACATATGTATTGGAATGTTG+GGG + chr1_3:56447133-56447152 None:intergenic 30.0%
GACATATGTATTGGAATGTT+GGG + chr1_3:56447134-56447153 None:intergenic 30.0%
!! TAGTTTCTTTTAGAAAGCAC+AGG + chr1_3:56447633-56447652 None:intergenic 30.0%
AGATTGAAGTTTGAGTGTAT+AGG - chr1_3:56447885-56447904 Msa0127210:intron 30.0%
ATGATTATTCAAGGTCACAA+AGG - chr1_3:56448002-56448021 Msa0127210:intron 30.0%
TAAAAGTTCCTAACAACACA+TGG - chr1_3:56448165-56448184 Msa0127210:intron 30.0%
! TGAAATTTCCATGTGTTGTT+AGG + chr1_3:56448176-56448195 None:intergenic 30.0%
TAAAAGTTCCTAACAACACA+TGG - chr1_3:56448165-56448184 Msa0127210:intron 30.0%
! TGAAATTTCCATGTGTTGTT+AGG + chr1_3:56448176-56448195 None:intergenic 30.0%
CAAACCTTCATAATAACACA+TGG + chr1_3:56448288-56448307 None:intergenic 30.0%
CCGTTAGAAAAAATCATTCA+AGG - chr1_3:56448483-56448502 Msa0127210:intron 30.0%
GATAAAAACGTGACGATAAA+AGG + chr1_3:56448546-56448565 None:intergenic 30.0%
ATAGTAGAAAGTTAGTTAGG+GGG - chr1_3:56448696-56448715 Msa0127210:intron 30.0%
TAGATTGTGTAATTCTCTCT+AGG + chr1_3:56448804-56448823 None:intergenic 30.0%
CTAGATCAAATGCAATAGAA+AGG + chr1_3:56448827-56448846 None:intergenic 30.0%
TTGCATTTGATCTAGAAACA+TGG - chr1_3:56448832-56448851 Msa0127210:intron 30.0%
GAATCCTTTGATTCATAACA+TGG - chr1_3:56448854-56448873 Msa0127210:intron 30.0%
GATACCATGTTATGAATCAA+AGG + chr1_3:56448861-56448880 None:intergenic 30.0%
ATCAACTCTGAATCAAGAAT+CGG + chr1_3:56449185-56449204 None:intergenic 30.0%
! ATGCTTTGAATTCTTGATTG+CGG + chr1_3:56449267-56449286 None:intergenic 30.0%
GGAAAGAATCTGTTATTCAA+TGG - chr1_3:56449551-56449570 Msa0127210:intron 30.0%
TTCTAATATGTGGTATTGCA+AGG + chr1_3:56449817-56449836 None:intergenic 30.0%
TTTCTCACATGTTCTCAATT+GGG - chr1_3:56450228-56450247 Msa0127210:intron 30.0%
GATAAAAACGTGACGATAAA+AGG + chr1_3:56448546-56448565 None:intergenic 30.0%
AGTACAAAATGATACTTTGG+AGG + chr1_3:56450868-56450887 None:intergenic 30.0%
AAAATAGTCTCGCTAGTTAT+TGG + chr1_3:56450916-56450935 None:intergenic 30.0%
!!! AGAGCTGTTTTTGAATTGTA+AGG - chr1_3:56441854-56441873 Msa0127210:intron 30.0%
!!! TAATCTTGTTTTTCTCACTC+AGG - chr1_3:56451408-56451427 Msa0127210:intron 30.0%
ATTGAAGATGCCGAAAATAA+TGG - chr1_3:56451446-56451465 Msa0127210:intron 30.0%
TAATCAGTAATTACCTTTCC+AGG + chr1_3:56451482-56451501 None:intergenic 30.0%
!! CTTACAAGTTTTATGAGTCT+AGG + chr1_3:56451531-56451550 None:intergenic 30.0%
!! TTTGTTTTCAATGTGAGACT+TGG - chr1_3:56451667-56451686 Msa0127210:intron 30.0%
TATAAAGTCTGTTCTTGTTG+AGG - chr1_3:56452111-56452130 Msa0127210:intron 30.0%
!!! AGTTGATGGAGTTTTTGAAA+AGG - chr1_3:56452288-56452307 Msa0127210:intron 30.0%
TGATTGAGCATATAGCTATT+AGG + chr1_3:56452337-56452356 None:intergenic 30.0%
!! ATGAACTATGAAAGTACCTT+TGG + chr1_3:56452379-56452398 None:intergenic 30.0%
TATTGCCTAATTTGGTTGAT+AGG - chr1_3:56452398-56452417 Msa0127210:intron 30.0%
TTCAACCTATCAACCAAATT+AGG + chr1_3:56452406-56452425 None:intergenic 30.0%
!! ACCTTGTATACTTTTTGTGT+TGG - chr1_3:56452610-56452629 Msa0127210:intron 30.0%
!! CCTTGTATACTTTTTGTGTT+GGG - chr1_3:56452611-56452630 Msa0127210:intron 30.0%
TTCAGAATAGTAAAATCACC+TGG + chr1_3:56452765-56452784 None:intergenic 30.0%
!! AGTTTTTAGACAACAACTTG+AGG - chr1_3:56452857-56452876 Msa0127210:intron 30.0%
! TGAAGGAAAAGACAAGTTTT+GGG + chr1_3:56453053-56453072 None:intergenic 30.0%
! ATGAAGGAAAAGACAAGTTT+TGG + chr1_3:56453054-56453073 None:intergenic 30.0%
!! ACTCGTTTTTGTTTCTTTTC+TGG - chr1_3:56453084-56453103 Msa0127210:intron 30.0%
AAATTATGAAGGCTTCACTT+AGG + chr1_3:56453110-56453129 None:intergenic 30.0%
TCCAATTTCCTAAAAGAAGA+TGG - chr1_3:56453188-56453207 Msa0127210:intron 30.0%
!! ACCATCTTCTTTTAGGAAAT+TGG + chr1_3:56453192-56453211 None:intergenic 30.0%
CCTAAAAGAAGATGGTAAAA+CGG - chr1_3:56453196-56453215 Msa0127210:intron 30.0%
! TGAGTTTAATGGATATGCAT+CGG - chr1_3:56453793-56453812 Msa0127210:intron 30.0%
AGTAACATAAAGTGACGTTA+TGG + chr1_3:56453867-56453886 None:intergenic 30.0%
ATATTTCCAAATTGTTGTGC+AGG - chr1_3:56454135-56454154 Msa0127210:intron 30.0%
!!! ACCTAATGTTTTCAGGTTTA+GGG + chr1_3:56454618-56454637 None:intergenic 30.0%
!!! AACCTAATGTTTTCAGGTTT+AGG + chr1_3:56454619-56454638 None:intergenic 30.0%
AAAAAAGCTCTTTCTTGATG+GGG + chr1_3:56445577-56445596 None:intergenic 30.0%
! ATCAAAAGTTTTCCTGACAA+TGG + chr1_3:56454843-56454862 None:intergenic 30.0%
AAGTACAATTTGCATGTGTT+TGG - chr1_3:56455006-56455025 Msa0127210:intron 30.0%
GTCTCAATGAAACAGTTTAT+TGG - chr1_3:56455202-56455221 Msa0127210:intron 30.0%
GTAATAAGGGTAGTTAGAAT+TGG + chr1_3:56455350-56455369 None:intergenic 30.0%
! ATTTTAGATCTATGTGGCTT+AGG + chr1_3:56455396-56455415 None:intergenic 30.0%
ACAAAGTTTCCTACCTATAT+GGG + chr1_3:56455499-56455518 None:intergenic 30.0%
TACAAAGTTTCCTACCTATA+TGG + chr1_3:56455500-56455519 None:intergenic 30.0%
TTGTAAATACAAACCAAGGA+AGG - chr1_3:56455515-56455534 Msa0127210:intron 30.0%
TGTAAATACAAACCAAGGAA+GGG - chr1_3:56455516-56455535 Msa0127210:intron 30.0%
AATTATATTACTCCCTTCCT+TGG + chr1_3:56455531-56455550 None:intergenic 30.0%
AGGAAGGGAGTAATATAATT+TGG - chr1_3:56455531-56455550 Msa0127210:intron 30.0%
AGGGAGTAATATAATTTGGA+TGG - chr1_3:56455535-56455554 Msa0127210:intron 30.0%
!!! TCTTCTTCCATTTTTTAGAG+CGG + chr1_3:56455607-56455626 None:intergenic 30.0%
GAAAAGAATACGAGAGAAAA+AGG + chr1_3:56456066-56456085 None:intergenic 30.0%
! TCTTGAATTGCATGTTGATT+TGG + chr1_3:56456177-56456196 None:intergenic 30.0%
AAGAAGTTTGTGTGAAGTTA+TGG - chr1_3:56456337-56456356 Msa0127210:intron 30.0%
TTAAGCACAAACTGATCTAT+GGG - chr1_3:56456385-56456404 Msa0127210:intron 30.0%
GATCTATGGGTACATAATAA+TGG - chr1_3:56456398-56456417 Msa0127210:intron 30.0%
GTTAATAAGCTGTTCATGAA+TGG - chr1_3:56456432-56456451 Msa0127210:intron 30.0%
TAATAAGCTGTTCATGAATG+GGG - chr1_3:56456434-56456453 Msa0127210:intron 30.0%
CTATAACTGAAGTGTATGTT+TGG - chr1_3:56456457-56456476 Msa0127210:intron 30.0%
! AAGTGTATGTTTGGAATTGT+GGG - chr1_3:56456466-56456485 Msa0127210:intron 30.0%
! GTGTAGTTTGGAATTGAAAT+TGG - chr1_3:56456557-56456576 Msa0127210:intron 30.0%
ATTTGAAGGGAATTGAATGA+GGG + chr1_3:56456585-56456604 None:intergenic 30.0%
TCATTCAATTCCCTTCAAAT+CGG - chr1_3:56456585-56456604 Msa0127210:intron 30.0%
! GAAATCTATATCCGATTTGA+AGG + chr1_3:56456599-56456618 None:intergenic 30.0%
GTCAGTATTTACTAAAATGG+GGG - chr1_3:56456940-56456959 Msa0127210:intron 30.0%
ATGATGAGGAAGATGTTAAA+AGG + chr1_3:56456973-56456992 None:intergenic 30.0%
GAACTTATATAACGATGATG+AGG + chr1_3:56456987-56457006 None:intergenic 30.0%
CAAGCCGAGTATAATTAAAT+TGG + chr1_3:56457018-56457037 None:intergenic 30.0%
ATAAAGTAGGGGAATTGAAA+TGG - chr1_3:56457054-56457073 Msa0127210:intron 30.0%
!! TTTCGATTTGTTGTGAAAGA+TGG - chr1_3:56457246-56457265 Msa0127210:intron 30.0%
! TTGGAAGTATATACAATGTG+TGG - chr1_3:56457770-56457789 Msa0127210:intron 30.0%
AACAAAAGAGACATTCATCA+AGG + chr1_3:56458053-56458072 None:intergenic 30.0%
GAGAATACATGTTCTTAAAC+AGG - chr1_3:56458174-56458193 Msa0127210:intron 30.0%
TTTCCGTAACAAGAGAATTA+AGG - chr1_3:56458705-56458724 Msa0127210:intron 30.0%
TTCCGTAACAAGAGAATTAA+GGG - chr1_3:56458706-56458725 Msa0127210:intron 30.0%
AAGAAAAGTAGCATTTCGTA+CGG - chr1_3:56458836-56458855 Msa0127210:intron 30.0%
TCCTAAAGTAGCATTTAGTA+CGG - chr1_3:56458876-56458895 Msa0127210:intron 30.0%
TGATTGTGACCTTGAATATA+AGG + chr1_3:56458920-56458939 None:intergenic 30.0%
ATACAATCAAGAGAATCTCT+TGG - chr1_3:56448031-56448050 Msa0127210:intron 30.0%
TACAATCAAGAGAATCTCTT+GGG - chr1_3:56448032-56448051 Msa0127210:intron 30.0%
TAGGATTTAGTACAATCTAC+CGG + chr1_3:56459024-56459043 None:intergenic 30.0%
GATAAAAACGTGACGATAAA+AGG + chr1_3:56448546-56448565 None:intergenic 30.0%
!!! TAGTTTTTTTTATGGTGTCC+GGG - chr1_3:56459231-56459250 Msa0127210:intron 30.0%
!!! TTTCTACGAAGAGCATTTTA+GGG + chr1_3:56451071-56451090 None:intergenic 30.0%
! TTTTACCAAAATTTCAACCG+TGG - chr1_3:56460033-56460052 Msa0127210:intron 30.0%
TGGTTAATTAATAGAAGAGC+AGG - chr1_3:56460239-56460258 Msa0127210:intron 30.0%
CAAATAGGAGATTCAATTTG+TGG + chr1_3:56460304-56460323 None:intergenic 30.0%
CACAAATTGAATCTCCTATT+TGG - chr1_3:56460302-56460321 Msa0127210:intron 30.0%
AGTGAAGATATAAAAGAGAG+GGG + chr1_3:56460530-56460549 None:intergenic 30.0%
CAGTGAAGATATAAAAGAGA+GGG + chr1_3:56460531-56460550 None:intergenic 30.0%
ACAGTGAAGATATAAAAGAG+AGG + chr1_3:56460532-56460551 None:intergenic 30.0%
!!! TAATCTTGTTTTTCTCACTC+AGG - chr1_3:56451408-56451427 Msa0127210:intron 30.0%
ATTGAAGATGCCGAAAATAA+AGG - chr1_3:56451446-56451465 Msa0127210:intron 30.0%
AATCAGTAATATACCTTTGC+AGG + chr1_3:56460924-56460943 None:intergenic 30.0%
!! TCTTACAAGTTTTATGAGTC+CGG + chr1_3:56460976-56460995 None:intergenic 30.0%
TATAAAGACTGTTCTTGTTG+AGG - chr1_3:56461209-56461228 Msa0127210:intron 30.0%
!!! AGTTGATGGAGTTTTTGAAA+AGG - chr1_3:56452288-56452307 Msa0127210:intron 30.0%
CCTATCAAATCAACCAAATT+AGG + chr1_3:56461504-56461523 None:intergenic 30.0%
!! CCTAATTTGGTTGATTTGAT+AGG - chr1_3:56461501-56461520 Msa0127210:intron 30.0%
!! ACCTTGTATACTTTTTGTGT+TGG - chr1_3:56452610-56452629 Msa0127210:intron 30.0%
!! CCTTGTATACTTTTTGTGTT+GGG - chr1_3:56452611-56452630 Msa0127210:intron 30.0%
TTCAAAATTGCACTTTCAGT+TGG + chr1_3:56461836-56461855 None:intergenic 30.0%
!! ACTGAAAGTGCAATTTTGAA+TGG - chr1_3:56461836-56461855 Msa0127210:intron 30.0%
TCCATTTGAACACATTTCAA+AGG - chr1_3:56462004-56462023 Msa0127210:intron 30.0%
CAAGCATATTGTTCTTACTT+AGG + chr1_3:56462183-56462202 None:intergenic 30.0%
! TGAACTTTTGAACTGATACT+TGG - chr1_3:56462204-56462223 Msa0127210:intron 30.0%
TATAATATATGTGCATGACC+TGG + chr1_3:56462357-56462376 None:intergenic 30.0%
TATAGTTCACAAAACCTTGT+TGG + chr1_3:56462503-56462522 None:intergenic 30.0%
!! AACAAGGTTTTGTGAACTAT+AGG - chr1_3:56462502-56462521 Msa0127210:intron 30.0%
TTTGCGGTTATATATTTGCA+GGG + chr1_3:56462653-56462672 None:intergenic 30.0%
ATTTGCGGTTATATATTTGC+AGG + chr1_3:56462654-56462673 None:intergenic 30.0%
ACATGTGTGCAAATTAACTA+GGG + chr1_3:56462901-56462920 None:intergenic 30.0%
TACATGTGTGCAAATTAACT+AGG + chr1_3:56462902-56462921 None:intergenic 30.0%
AAAAGAAAACAGAGAAATCC+TGG - chr1_3:56463490-56463509 Msa0127210:intron 30.0%
AAAGAAAACAGAGAAATCCT+GGG - chr1_3:56463491-56463510 Msa0127210:intron 30.0%
AAAACACTCATTTATACCAC+TGG - chr1_3:56463539-56463558 Msa0127210:intron 30.0%
AAACACTCATTTATACCACT+GGG - chr1_3:56463540-56463559 Msa0127210:intron 30.0%
!! GAACGAACCATTACTTTTAA+CGG - chr1_3:56464347-56464366 Msa0127210:CDS 30.0%
TTACTCTTGTGGAGAAAATT+TGG + chr1_3:56464426-56464445 None:intergenic 30.0%
! AAATTTTCTCCACAAGAGTA+AGG - chr1_3:56464425-56464444 Msa0127210:intron 30.0%
TCCATGTTATCTGATGAAGA+AGG + chr1_3:56441514-56441533 None:intergenic 35.0%
TCTTTCTTGATTGCACATTG+TGG + chr1_3:56441538-56441557 None:intergenic 35.0%
GATAAGACAGTGTAGATCAA+AGG + chr1_3:56441606-56441625 None:intergenic 35.0%
TACACTGTCTTATCCTATCA+TGG - chr1_3:56441612-56441631 Msa0127210:three_prime_UTR 35.0%
AAAAACACTGCAACCATGAT+AGG + chr1_3:56441628-56441647 None:intergenic 35.0%
! AGATTGCAAGTATTCTAGCT+TGG + chr1_3:56441781-56441800 None:intergenic 35.0%
GAATAAAGGTCTCATTACTC+CGG - chr1_3:56441961-56441980 Msa0127210:CDS 35.0%
AATAAAGGTCTCATTACTCC+GGG - chr1_3:56441962-56441981 Msa0127210:CDS 35.0%
GTACAAAATGAGAATGCACT+AGG - chr1_3:56442205-56442224 Msa0127210:intron 35.0%
! TGTTCTAGTTGGTTATCAGA+CGG + chr1_3:56442488-56442507 None:intergenic 35.0%
CTCTCAAGACTCACATAAAA+TGG + chr1_3:56442982-56443001 None:intergenic 35.0%
! AGAATTCTACTCAGAGCTTT+TGG - chr1_3:56443003-56443022 Msa0127210:intron 35.0%
TTGTGACAATACCTTTGGAT+TGG + chr1_3:56443145-56443164 None:intergenic 35.0%
! TCCTAATATGGTTGATGTCT+TGG - chr1_3:56443173-56443192 Msa0127210:intron 35.0%
TCCAAGACATCAACCATATT+AGG + chr1_3:56443177-56443196 None:intergenic 35.0%
TAGATTCATTATGAGACCAC+TGG - chr1_3:56443232-56443251 Msa0127210:intron 35.0%
AAAATTGATGCTTTGGTTGC+AGG - chr1_3:56443283-56443302 Msa0127210:intron 35.0%
AAATTGATGCTTTGGTTGCA+GGG - chr1_3:56443284-56443303 Msa0127210:intron 35.0%
TTCTACACCATACACCTATA+GGG + chr1_3:56443448-56443467 None:intergenic 35.0%
GTTTCGACGTCATATGTAAT+TGG - chr1_3:56443663-56443682 Msa0127210:intron 35.0%
AATTAGTAAACAGCCTCAAG+TGG + chr1_3:56443730-56443749 None:intergenic 35.0%
! GAGAGTCTCATTTGAAATGA+AGG + chr1_3:56443924-56443943 None:intergenic 35.0%
AGAATTAGAAGATGACAGTG+AGG - chr1_3:56444031-56444050 Msa0127210:intron 35.0%
CTTGTATTAGCAGCTAGTAT+TGG + chr1_3:56444141-56444160 None:intergenic 35.0%
CAATACTAGCTGCTAATACA+AGG - chr1_3:56444139-56444158 Msa0127210:intron 35.0%
!!! GGATTTTGTTTTGACCAACA+AGG - chr1_3:56444161-56444180 Msa0127210:intron 35.0%
TGTAATTCACAGAACCTTGT+TGG + chr1_3:56444178-56444197 None:intergenic 35.0%
AACAAGGTTCTGTGAATTAC+AGG - chr1_3:56444177-56444196 Msa0127210:intron 35.0%
TACCAGTAAACCTTCTTTCA+AGG + chr1_3:56444242-56444261 None:intergenic 35.0%
TGAAAGAAGGTTTACTGGTA+TGG - chr1_3:56444242-56444261 Msa0127210:CDS 35.0%
! TACTTTTGTATGTTAGGCAC+CGG + chr1_3:56444454-56444473 None:intergenic 35.0%
! ATGAGCTTTCCTACATTTTC+TGG + chr1_3:56444640-56444659 None:intergenic 35.0%
AGGACTGTAAACTGTGAATA+AGG + chr1_3:56444856-56444875 None:intergenic 35.0%
TTATTAGGCGCAGACTTATA+AGG - chr1_3:56444884-56444903 Msa0127210:intron 35.0%
GCAGAATTGTAAGGTGATTA+TGG - chr1_3:56444921-56444940 Msa0127210:intron 35.0%
ATTACTTAATGTTGTGCAGG+TGG - chr1_3:56444965-56444984 Msa0127210:intron 35.0%
!!! CAATACTTTTTGAGTCCATC+AGG - chr1_3:56445020-56445039 Msa0127210:intron 35.0%
GGCTAAAATCAACTAATGCA+AGG + chr1_3:56445235-56445254 None:intergenic 35.0%
GCTAGAAATTGAAGCTTAAG+AGG + chr1_3:56445256-56445275 None:intergenic 35.0%
AAAAGTCTTCCTAACAATGG+TGG + chr1_3:56445649-56445668 None:intergenic 35.0%
CACATTCGCAAGAATACTAT+TGG + chr1_3:56445849-56445868 None:intergenic 35.0%
!! CGTTTTCAGTCAAAGTGTTA+TGG - chr1_3:56445876-56445895 Msa0127210:intron 35.0%
GTGTTATGGGATAAACTTGA+AGG - chr1_3:56445890-56445909 Msa0127210:intron 35.0%
GTTATGGGATAAACTTGAAG+GGG - chr1_3:56445892-56445911 Msa0127210:intron 35.0%
CAGAATATACAAGTAGATGC+GGG - chr1_3:56446128-56446147 Msa0127210:intron 35.0%
!!! CGGTTCAAAACATTTTGGTT+CGG - chr1_3:56446388-56446407 Msa0127210:intron 35.0%
GTAACACTTGTATATAGAGG+TGG + chr1_3:56446511-56446530 None:intergenic 35.0%
TTGTTAGATCTATGTGGCTT+AGG + chr1_3:56446594-56446613 None:intergenic 35.0%
!! TGTTTGGTAAGATGATGGAA+TGG + chr1_3:56446719-56446738 None:intergenic 35.0%
CCCGTATATCAAAACATGTT+TGG + chr1_3:56446735-56446754 None:intergenic 35.0%
!!! ACATGTTTTGATATACGGGT+AGG - chr1_3:56446736-56446755 Msa0127210:intron 35.0%
TTGTCAATACAAACCAAGGA+AGG - chr1_3:56446764-56446783 Msa0127210:intron 35.0%
TGTCAATACAAACCAAGGAA+GGG - chr1_3:56446765-56446784 Msa0127210:intron 35.0%
CGCAGACAAAGTAAAAAGTA+AGG - chr1_3:56446822-56446841 Msa0127210:intron 35.0%
TGCAAAAACTGCATTTGGTT+TGG - chr1_3:56446891-56446910 Msa0127210:intron 35.0%
GGACATATGTATTGGAATGT+TGG + chr1_3:56447135-56447154 None:intergenic 35.0%
!!! CGAAAGCTGTCTTTTTTTGA+CGG + chr1_3:56447393-56447412 None:intergenic 35.0%
CGTCAAAAAAAGACAGCTTT+CGG - chr1_3:56447391-56447410 Msa0127210:intron 35.0%
TACGTGTTCAATGACAGTTT+CGG + chr1_3:56447516-56447535 None:intergenic 35.0%
! CTACATAATCAAGCTTTTGC+AGG - chr1_3:56447650-56447669 Msa0127210:intron 35.0%
GCTTTCTTCATCGGATAATA+TGG - chr1_3:56447672-56447691 Msa0127210:intron 35.0%
AATCTCTTGACAATGTCTCT+TGG - chr1_3:56448044-56448063 Msa0127210:intron 35.0%
ATCTCTTGACAATGTCTCTT+GGG - chr1_3:56448045-56448064 Msa0127210:intron 35.0%
TGTCTCTTGGGAAAACAATT+AGG - chr1_3:56448057-56448076 Msa0127210:intron 35.0%
TATCTGGTCATACAATCTAG+CGG + chr1_3:56448117-56448136 None:intergenic 35.0%
TTTCAAAAAAAAGCCCCCAA+TGG - chr1_3:56448228-56448247 Msa0127210:intron 35.0%
TGGTACTTCATCTACATGTT+AGG + chr1_3:56448400-56448419 None:intergenic 35.0%
TCTTCTTCTTCATCAGAAAC+TGG + chr1_3:56448912-56448931 None:intergenic 35.0%
ATCTTCTTCTTCATCACCAT+CGG + chr1_3:56448937-56448956 None:intergenic 35.0%
!! TCGCAAGTTTCAGTTGTTTT+CGG - chr1_3:56448996-56449015 Msa0127210:intron 35.0%
!! TCAGTTGTTTTCGGTAGTTT+TGG - chr1_3:56449005-56449024 Msa0127210:intron 35.0%
CTTGAATCAACGAGAAAACA+AGG + chr1_3:56449110-56449129 None:intergenic 35.0%
!! AATCAAGAATCGGTGTTTTC+TGG + chr1_3:56449175-56449194 None:intergenic 35.0%
! ACTTGAGTAGAAGTTCGTTT+TGG - chr1_3:56449686-56449705 Msa0127210:intron 35.0%
! CTTGTTCCAATTTTCAAAGG+AGG - chr1_3:56449733-56449752 Msa0127210:intron 35.0%
ACTTGTAACAAACACGATTC+TGG + chr1_3:56449782-56449801 None:intergenic 35.0%
!!! AGATTCTGAAAAAGCGCTTT+TGG - chr1_3:56450013-56450032 Msa0127210:intron 35.0%
!!! GATTCTGAAAAAGCGCTTTT+GGG - chr1_3:56450014-56450033 Msa0127210:intron 35.0%
!!! GTTTTTTGCAAAAGCACTTC+TGG - chr1_3:56450129-56450148 Msa0127210:intron 35.0%
AGAAGTCAGAAACATGTAAG+AGG - chr1_3:56450184-56450203 Msa0127210:intron 35.0%
CTTTCTCACATGTTCTCAAT+TGG - chr1_3:56450227-56450246 Msa0127210:intron 35.0%
!!! ATTTCCCCATTTTGAGTTTG+AGG - chr1_3:56450385-56450404 Msa0127210:intron 35.0%
!!! TTTCCCCATTTTGAGTTTGA+GGG - chr1_3:56450386-56450405 Msa0127210:intron 35.0%
ACTCTAGCAGAAAGTTAGTT+AGG - chr1_3:56450456-56450475 Msa0127210:intron 35.0%
!!! GACACTTATTTTGAAACGGA+GGG + chr1_3:56450737-56450756 None:intergenic 35.0%
!!! TGACACTTATTTTGAAACGG+AGG + chr1_3:56450738-56450757 None:intergenic 35.0%
CCAATTGCACACAGATTATA+AGG + chr1_3:56450977-56450996 None:intergenic 35.0%
CCTTATAATCTGTGTGCAAT+TGG - chr1_3:56450974-56450993 Msa0127210:intron 35.0%
TTGGTTAAAACCACAACGAA+TGG - chr1_3:56450993-56451012 Msa0127210:intron 35.0%
AATAATGGCTTCATTACTCC+TGG - chr1_3:56451461-56451480 Msa0127210:intron 35.0%
! AAAATTATACTGCGCGCTTT+TGG - chr1_3:56452232-56452251 Msa0127210:CDS 35.0%
AAAAACTCCATCAACTCCTT+TGG + chr1_3:56452284-56452303 None:intergenic 35.0%
TGAAAATCCTGTCAATCCAA+AGG - chr1_3:56452360-56452379 Msa0127210:intron 35.0%
TATCTAAGTTTCTCTCCTTG+AGG + chr1_3:56452573-56452592 None:intergenic 35.0%
GGAGAGAAACTTAGATATCA+AGG - chr1_3:56452576-56452595 Msa0127210:intron 35.0%
! CCCAACACAAAAAGTATACA+AGG + chr1_3:56452614-56452633 None:intergenic 35.0%
!!! TTTATGTTACTTTTCCCCCT+AGG - chr1_3:56452692-56452711 Msa0127210:intron 35.0%
TTCAGAATTGCACTTTCAGT+TGG + chr1_3:56452732-56452751 None:intergenic 35.0%
! ACTGAAAGTGCAATTCTGAA+TGG - chr1_3:56452732-56452751 Msa0127210:intron 35.0%
TCTCCTAGATGAAGTTATTC+AGG - chr1_3:56452979-56452998 Msa0127210:intron 35.0%
CTACCTGAATAACTTCATCT+AGG + chr1_3:56443842-56443861 None:intergenic 35.0%
ACGAGTCTCATTTCAAATGA+AGG + chr1_3:56453070-56453089 None:intergenic 35.0%
! CCGTTTTACCATCTTCTTTT+AGG + chr1_3:56453199-56453218 None:intergenic 35.0%
! GACAAAGCTTTGTCAAGATT+TGG + chr1_3:56453431-56453450 None:intergenic 35.0%
TATAATATATGTGCGTGACC+TGG + chr1_3:56453457-56453476 None:intergenic 35.0%
TTGAGTTCAATAGTGACATG+AGG - chr1_3:56453484-56453503 Msa0127210:intron 35.0%
TATAGTTCGCAAAACCTTGT+TGG + chr1_3:56453604-56453623 None:intergenic 35.0%
! AACAAGGTTTTGCGAACTAT+AGG - chr1_3:56453603-56453622 Msa0127210:intron 35.0%
!! TGCTTTGAAAGAAGGTTTAC+TGG - chr1_3:56453663-56453682 Msa0127210:intron 35.0%
! GAGTTTAATGGATATGCATC+GGG - chr1_3:56453794-56453813 Msa0127210:intron 35.0%
! AGTTTAATGGATATGCATCG+GGG - chr1_3:56453795-56453814 Msa0127210:intron 35.0%
ACGTTATGGTGAGATATGAT+TGG + chr1_3:56453853-56453872 None:intergenic 35.0%
! ATGTGAATGTCTTTTGCAGA+TGG - chr1_3:56453935-56453954 Msa0127210:intron 35.0%
! TGTGAATGTCTTTTGCAGAT+GGG - chr1_3:56453936-56453955 Msa0127210:intron 35.0%
TGCGTCGAATAAACATACTA+AGG + chr1_3:56454051-56454070 None:intergenic 35.0%
GGCTAAATCAACTAATGCAA+GGG + chr1_3:56454408-56454427 None:intergenic 35.0%
AGGCTAAATCAACTAATGCA+AGG + chr1_3:56454409-56454428 None:intergenic 35.0%
ACCCTAAACCTGAAAACATT+AGG - chr1_3:56454614-56454633 Msa0127210:CDS 35.0%
! CTCGTAAACCTAATGTTTTC+AGG + chr1_3:56454625-56454644 None:intergenic 35.0%
! AAAAGTTTTCCTGACAATGG+TGG + chr1_3:56454840-56454859 None:intergenic 35.0%
! TCAGGAAAACTTTTGATGCA+AGG - chr1_3:56454846-56454865 Msa0127210:intron 35.0%
AACGGTAGTATAAGAACTGA+TGG + chr1_3:56454884-56454903 None:intergenic 35.0%
ATCAGTTCTTATACTACCGT+TGG - chr1_3:56454883-56454902 Msa0127210:intron 35.0%
TCAGTTCTTATACTACCGTT+GGG - chr1_3:56454884-56454903 Msa0127210:intron 35.0%
TGTTGTTAAACTCACTTGTG+TGG + chr1_3:56454946-56454965 None:intergenic 35.0%
CACAAGTGAGTTTAACAACA+TGG - chr1_3:56454946-56454965 Msa0127210:intron 35.0%
TCAGTATGGGATAAACTTGA+AGG - chr1_3:56455064-56455083 Msa0127210:intron 35.0%
CAGTATGGGATAAACTTGAA+GGG - chr1_3:56455065-56455084 Msa0127210:intron 35.0%
AGTATGGGATAAACTTGAAG+GGG - chr1_3:56455066-56455085 Msa0127210:intron 35.0%
TTCATTGAGACTTCATCTTC+AGG + chr1_3:56446019-56446038 None:intergenic 35.0%
TAGAACACTATCACCCATAT+AGG - chr1_3:56455483-56455502 Msa0127210:intron 35.0%
ATCAGTTGGACATGTCAAAA+CGG - chr1_3:56455888-56455907 Msa0127210:intron 35.0%
AAAAGGTTACGAATTAACGG+AGG - chr1_3:56455967-56455986 Msa0127210:intron 35.0%
AGAGAAGAAGAAAGAATGGA+GGG + chr1_3:56456113-56456132 None:intergenic 35.0%
CATTCTTTCTTCTTCTCTCA+CGG - chr1_3:56456115-56456134 Msa0127210:intron 35.0%
TTAGGGATGATTGATGAGAA+TGG + chr1_3:56456148-56456167 None:intergenic 35.0%
!! TGTTGATTTGGCAAGGTTTA+GGG + chr1_3:56456165-56456184 None:intergenic 35.0%
!! ATGTTGATTTGGCAAGGTTT+AGG + chr1_3:56456166-56456185 None:intergenic 35.0%
!! AATTGCATGTTGATTTGGCA+AGG + chr1_3:56456172-56456191 None:intergenic 35.0%
CAACATGCAATTCAAGAACT+AGG - chr1_3:56456180-56456199 Msa0127210:intron 35.0%
GTAAGATACTTGAGGTTACA+TGG + chr1_3:56456208-56456227 None:intergenic 35.0%
AAGCTGTAGTAAGATACTTG+AGG + chr1_3:56456216-56456235 None:intergenic 35.0%
TTGCTTGATTCAACATCCAA+GGG + chr1_3:56456290-56456309 None:intergenic 35.0%
TGAATCAAGCAAGTTTCAAG+AGG - chr1_3:56456298-56456317 Msa0127210:intron 35.0%
GAATCAAGCAAGTTTCAAGA+GGG - chr1_3:56456299-56456318 Msa0127210:intron 35.0%
GTTAAGCACAAACTGATCTA+TGG - chr1_3:56456384-56456403 Msa0127210:intron 35.0%
! GAAGTGTATGTTTGGAATTG+TGG - chr1_3:56456465-56456484 Msa0127210:intron 35.0%
CATGGTTGAATTCCATGAAA+TGG - chr1_3:56456492-56456511 Msa0127210:intron 35.0%
!! GTATCTTTTGCTGTGTAGTT+TGG - chr1_3:56456545-56456564 Msa0127210:intron 35.0%
GATTTGAAGGGAATTGAATG+AGG + chr1_3:56456586-56456605 None:intergenic 35.0%
! ATTAAGCTGAAGCATCAATG+AGG - chr1_3:56456756-56456775 Msa0127210:intron 35.0%
!! TTTTGCTATGTTGTGGAACA+TGG - chr1_3:56457110-56457129 Msa0127210:intron 35.0%
!! ACCTAGTATTGATTTCGGTT+AGG - chr1_3:56457319-56457338 Msa0127210:intron 35.0%
!! CCTAGTATTGATTTCGGTTA+GGG - chr1_3:56457320-56457339 Msa0127210:intron 35.0%
TCTTCATGTCTTTACGATGT+CGG - chr1_3:56457720-56457739 Msa0127210:intron 35.0%
! GTGGATTTTCATGCGTATAA+AGG - chr1_3:56457789-56457808 Msa0127210:intron 35.0%
TTCATGCGTATAAAGGTTTG+CGG - chr1_3:56457796-56457815 Msa0127210:intron 35.0%
AAATGAAAGAGTAAGCCACA+AGG + chr1_3:56457941-56457960 None:intergenic 35.0%
ATACTCTGTCGAAATTTCAG+TGG - chr1_3:56458230-56458249 Msa0127210:intron 35.0%
! GTTTGTCAAGTGTTGTCAAT+AGG - chr1_3:56458299-56458318 Msa0127210:intron 35.0%
!! TGATAAGTTGGTGATGTGAT+CGG + chr1_3:56458431-56458450 None:intergenic 35.0%
! ACTTGGTATCCTAAGAGTAT+TGG - chr1_3:56447977-56447996 Msa0127210:intron 35.0%
TGCCCTTAATTCTCTTGTTA+CGG + chr1_3:56458711-56458730 None:intergenic 35.0%
!! ACCGTACTAAATGCTACTTT+AGG + chr1_3:56458880-56458899 None:intergenic 35.0%
TAAAGTAGCATTTAGTACGG+TGG - chr1_3:56458879-56458898 Msa0127210:intron 35.0%
ATTCAAGGTCACAATCACAA+AGG - chr1_3:56458923-56458942 Msa0127210:intron 35.0%
AGGATTTAGTACAATCTACC+GGG + chr1_3:56459023-56459042 None:intergenic 35.0%
!!! AGTTTTTTTTATGGTGTCCG+GGG - chr1_3:56459232-56459251 Msa0127210:intron 35.0%
!!! GTTTCTACGAAGAGCATTTT+AGG + chr1_3:56451072-56451091 None:intergenic 35.0%
TGTACTCTAACAATTTGGCA+AGG - chr1_3:56459689-56459708 Msa0127210:intron 35.0%
TTACTCTAACAATTTGGCAG+AGG - chr1_3:56459872-56459891 Msa0127210:intron 35.0%
TACTCTAACAATTTGGCAGA+GGG - chr1_3:56459873-56459892 Msa0127210:intron 35.0%
! AAGAACCACGGTTGAAATTT+TGG + chr1_3:56460041-56460060 None:intergenic 35.0%
ATGAATAAGTGCAAGAACCA+CGG + chr1_3:56460053-56460072 None:intergenic 35.0%
ATTGAATCTCCTATTTGGCT+TGG - chr1_3:56460307-56460326 Msa0127210:intron 35.0%
TACTTACTACCAAGCCAAAT+AGG + chr1_3:56460319-56460338 None:intergenic 35.0%
AGAAGACAAAACAAGGAGAT+TGG + chr1_3:56460353-56460372 None:intergenic 35.0%
!!! CTCCTTGTTTTGTCTTCTTT+TGG - chr1_3:56460355-56460374 Msa0127210:intron 35.0%
CACCAAAAGAAGACAAAACA+AGG + chr1_3:56460360-56460379 None:intergenic 35.0%
! GTTTTGTCTTCTTTTGGTGA+AGG - chr1_3:56460361-56460380 Msa0127210:intron 35.0%
CCATGTTATCTGATGAAGAA+AGG + chr1_3:56441513-56441532 None:intergenic 35.0%
CCTTTCTTCATCAGATAACA+TGG - chr1_3:56460438-56460457 Msa0127210:intron 35.0%
CCTTCTTAATTGCAAAGTGT+TGG + chr1_3:56460465-56460484 None:intergenic 35.0%
CCAACACTTTGCAATTAAGA+AGG - chr1_3:56460462-56460481 Msa0127210:intron 35.0%
! TTCACTGTCTTATTCAGCTA+TGG - chr1_3:56460544-56460563 Msa0127210:intron 35.0%
! GATAACTAGGTTTTCTTTCC+CGG - chr1_3:56460954-56460973 Msa0127210:intron 35.0%
!! CTTACAAGTTTTATGAGTCC+GGG + chr1_3:56460975-56460994 None:intergenic 35.0%
AAAATTATACCGCGAGCTTT+CGG - chr1_3:56461330-56461349 Msa0127210:intron 35.0%
AAAAACTCCATCAACTCCTT+TGG + chr1_3:56452284-56452303 None:intergenic 35.0%
TGAAAATCCTGTCAATCCAA+AGG - chr1_3:56452360-56452379 Msa0127210:intron 35.0%
GAAAATACCTTTGGATTGAC+AGG + chr1_3:56461468-56461487 None:intergenic 35.0%
TATCTAAGTTTCTCTCCTTG+AGG + chr1_3:56452573-56452592 None:intergenic 35.0%
GGAGAGAAACTTAGATATCA+AGG - chr1_3:56452576-56452595 Msa0127210:intron 35.0%
! CCCAACACAAAAAGTATACA+AGG + chr1_3:56452614-56452633 None:intergenic 35.0%
!! GAAAGTGCAATTTTGAATGG+AGG - chr1_3:56461839-56461858 Msa0127210:intron 35.0%
TTCAGAATAGTAAAACCACC+TGG + chr1_3:56461869-56461888 None:intergenic 35.0%
AATTCTTAGACAACCAGTTG+AGG - chr1_3:56461962-56461981 Msa0127210:intron 35.0%
AATCAATTAACGACCTCAAC+TGG + chr1_3:56461978-56461997 None:intergenic 35.0%
!! GCCTTTGAAATGTGTTCAAA+TGG + chr1_3:56462008-56462027 None:intergenic 35.0%
GAACATCTAATCCAAGGTAT+CGG - chr1_3:56462028-56462047 Msa0127210:intron 35.0%
TCTCCTAGATGAAGTTATTC+AGG - chr1_3:56452979-56452998 Msa0127210:intron 35.0%
CTACCTGAATAACTTCATCT+AGG + chr1_3:56443842-56443861 None:intergenic 35.0%
! GACAAAGCTTTGTCAAGATT+TGG + chr1_3:56453431-56453450 None:intergenic 35.0%
TTGAGTTACATAGTGACATG+AGG - chr1_3:56462384-56462403 Msa0127210:intron 35.0%
!! ATACTAGCTCTGCAAATACA+AGG - chr1_3:56462464-56462483 Msa0127210:intron 35.0%
!! TACTAGCTCTGCAAATACAA+GGG - chr1_3:56462465-56462484 Msa0127210:intron 35.0%
!! TGCTTTGAAAGAAGGTTTAC+TGG - chr1_3:56453663-56453682 Msa0127210:intron 35.0%
!! TTGAGTAATGGATATGCATC+AGG - chr1_3:56462694-56462713 Msa0127210:intron 35.0%
!! TGAGTAATGGATATGCATCA+GGG - chr1_3:56462695-56462714 Msa0127210:intron 35.0%
CTCGGCTCTCAATAAAAAAT+AGG - chr1_3:56462744-56462763 Msa0127210:intron 35.0%
GCATTATGGTGAGATAAGAT+TGG + chr1_3:56463756-56463775 None:intergenic 35.0%
! ATGTGAATGTCTTTTGCAGA+TGG - chr1_3:56453935-56453954 Msa0127210:intron 35.0%
! TGTGAATGTCTTTTGCAGAT+GGG - chr1_3:56453936-56453955 Msa0127210:intron 35.0%
ATTCAAAATCGTTGTTGTGC+AGG - chr1_3:56464088-56464107 Msa0127210:intron 35.0%
ACTTTGTGAATGACAACGTT+TGG - chr1_3:56464279-56464298 Msa0127210:intron 35.0%
CCAATCACCGTTAAAAGTAA+TGG + chr1_3:56464357-56464376 None:intergenic 35.0%
!! CCATTACTTTTAACGGTGAT+TGG - chr1_3:56464354-56464373 Msa0127210:CDS 35.0%
! TTGGTCTCAAAGAACTTGTT+AGG - chr1_3:56464373-56464392 Msa0127210:intron 35.0%
! AAGTTTTCTCCTTACTCTTG+TGG + chr1_3:56464437-56464456 None:intergenic 35.0%
GCCTTCTTCATCAGATAACA+TGG - chr1_3:56441510-56441529 Msa0127210:three_prime_UTR 40.0%
AGACAGTGTAGATCAAAGGT+AGG + chr1_3:56441602-56441621 None:intergenic 40.0%
GTTAATAGGGAACACACCAT+TGG - chr1_3:56441710-56441729 Msa0127210:CDS 40.0%
!!! GAATCTTGTTTTTCTCACGC+AGG - chr1_3:56441909-56441928 Msa0127210:intron 40.0%
!! TGACTTGTTCAGCAAGTTAC+TGG - chr1_3:56442228-56442247 Msa0127210:intron 40.0%
!! TTTGTTGTTAGAAAGTCCGC+TGG - chr1_3:56442287-56442306 Msa0127210:intron 40.0%
! AAACTGAAAGGTGGTGATGT+CGG - chr1_3:56442349-56442368 Msa0127210:intron 40.0%
TGTGTACATGGTATCAGAGA+AGG + chr1_3:56442433-56442452 None:intergenic 40.0%
TAGTTGGTTATCAGACGGTT+GGG + chr1_3:56442483-56442502 None:intergenic 40.0%
GAAGGATCATAAGCTTCATC+TGG - chr1_3:56442540-56442559 Msa0127210:intron 40.0%
ATAAGCTTCATCTGGTTGAG+TGG - chr1_3:56442548-56442567 Msa0127210:intron 40.0%
TGGTTGAGTGGAATATTGTG+AGG - chr1_3:56442560-56442579 Msa0127210:intron 40.0%
TATCTAACAGATCCTGCCAA+AGG - chr1_3:56443036-56443055 Msa0127210:intron 40.0%
GATCCTGCCAAAGGAATAAA+AGG - chr1_3:56443045-56443064 Msa0127210:intron 40.0%
! ACACCTTTTATTCCTTTGGC+AGG + chr1_3:56443051-56443070 None:intergenic 40.0%
TGAAAATCCTGCCAATCCAA+AGG - chr1_3:56443131-56443150 Msa0127210:intron 40.0%
TGGAGGGAAAATTGATGCTT+TGG - chr1_3:56443276-56443295 Msa0127210:intron 40.0%
!! AGGTGTTGGGAAGTTTCTTA+AGG - chr1_3:56443330-56443349 Msa0127210:intron 40.0%
GGAGAAAAACCCAGAGATAA+AGG - chr1_3:56443351-56443370 Msa0127210:intron 40.0%
!! TTATGTTGCTTTCCCCCTAT+AGG - chr1_3:56443431-56443450 Msa0127210:intron 40.0%
TCTACACCATACACCTATAG+GGG + chr1_3:56443447-56443466 None:intergenic 40.0%
GTTCTACACCATACACCTAT+AGG + chr1_3:56443449-56443468 None:intergenic 40.0%
TTCAGAACTGGACTTTCAGT+TGG + chr1_3:56443471-56443490 None:intergenic 40.0%
!! ACTGAAAGTCCAGTTCTGAA+TGG - chr1_3:56443471-56443490 Msa0127210:intron 40.0%
AAAGGCAATCATCGAATCCA+AGG - chr1_3:56443774-56443793 Msa0127210:intron 40.0%
AAGGCAATCATCGAATCCAA+GGG - chr1_3:56443775-56443794 Msa0127210:intron 40.0%
AATCATCGAATCCAAGGGAT+CGG - chr1_3:56443780-56443799 Msa0127210:intron 40.0%
AGAAGATCAACTTCCAGAAC+AGG + chr1_3:56443822-56443841 None:intergenic 40.0%
AAGTTGCTTGCCTTGAAAGA+AGG - chr1_3:56444229-56444248 Msa0127210:CDS 40.0%
TGCCTTGAAAGAAGGTTTAC+TGG - chr1_3:56444237-56444256 Msa0127210:CDS 40.0%
ATTATAAGGGGAAGGAAGGA+TGG + chr1_3:56444379-56444398 None:intergenic 40.0%
CATGATTATAAGGGGAAGGA+AGG + chr1_3:56444383-56444402 None:intergenic 40.0%
GGAACATGATTATAAGGGGA+AGG + chr1_3:56444387-56444406 None:intergenic 40.0%
GGGAGGAACATGATTATAAG+GGG + chr1_3:56444391-56444410 None:intergenic 40.0%
GGGGAGGAACATGATTATAA+GGG + chr1_3:56444392-56444411 None:intergenic 40.0%
AGGGGAGGAACATGATTATA+AGG + chr1_3:56444393-56444412 None:intergenic 40.0%
GAAGCTAACATGATTGCTGA+TGG + chr1_3:56444430-56444449 None:intergenic 40.0%
! AGCAATCATGTTAGCTTCAC+CGG - chr1_3:56444432-56444451 Msa0127210:intron 40.0%
TTGCAGATGGGAATTTCATC+AGG - chr1_3:56444577-56444596 Msa0127210:intron 40.0%
CTGCTGCTGCAATTAAACTA+GGG - chr1_3:56444608-56444627 Msa0127210:intron 40.0%
GCTCTACATGTCATAACTTG+TGG - chr1_3:56445100-56445119 Msa0127210:intron 40.0%
AAGTAACCACACAAGTGAGT+TGG - chr1_3:56445389-56445408 Msa0127210:intron 40.0%
TGGAAGAACACACACTTGAA+GGG + chr1_3:56445538-56445557 None:intergenic 40.0%
ATGGAAGAACACACACTTGA+AGG + chr1_3:56445539-56445558 None:intergenic 40.0%
GGGGAACATATCTAGATGAA+TGG + chr1_3:56445558-56445577 None:intergenic 40.0%
AGCAATAACATGCAAGTGTG+TGG + chr1_3:56445602-56445621 None:intergenic 40.0%
GCATGTTATTGCTCCATCAA+CGG - chr1_3:56445609-56445628 Msa0127210:intron 40.0%
CATGTTATTGCTCCATCAAC+GGG - chr1_3:56445610-56445629 Msa0127210:intron 40.0%
ATACTACTGTTGGGTCAAGA+AGG - chr1_3:56445702-56445721 Msa0127210:intron 40.0%
TACTACTGTTGGGTCAAGAA+GGG - chr1_3:56445703-56445722 Msa0127210:intron 40.0%
TGTTGTCCAACTCACTTGTA+TGG + chr1_3:56445763-56445782 None:intergenic 40.0%
! TACAAGTGAGTTGGACAACA+TGG - chr1_3:56445763-56445782 Msa0127210:intron 40.0%
AACATGGACAACAAGAAGTG+TGG - chr1_3:56445779-56445798 Msa0127210:intron 40.0%
! ACATGGACAACAAGAAGTGT+GGG - chr1_3:56445780-56445799 Msa0127210:intron 40.0%
! TGAAGGGGTGTATTAGACAA+AGG - chr1_3:56445907-56445926 Msa0127210:intron 40.0%
! GAAGGGGTGTATTAGACAAA+GGG - chr1_3:56445908-56445927 Msa0127210:intron 40.0%
CAATTCCGTTCAGTTCAGTT+TGG - chr1_3:56446233-56446252 Msa0127210:intron 40.0%
!!! CGGTTCGGTTCAAAACATTT+TGG - chr1_3:56446383-56446402 Msa0127210:intron 40.0%
TGTATATAGAGGTGGGCATA+TGG + chr1_3:56446503-56446522 None:intergenic 40.0%
!! GATGATGGAATGGACCATAT+GGG + chr1_3:56446709-56446728 None:intergenic 40.0%
!! AGATGATGGAATGGACCATA+TGG + chr1_3:56446710-56446729 None:intergenic 40.0%
! TTGCAGTTTTCACTTTGGGT+TGG + chr1_3:56446876-56446895 None:intergenic 40.0%
TCACTTAAGATACCTTGCGA+GGG + chr1_3:56447159-56447178 None:intergenic 40.0%
ATCACTTAAGATACCTTGCG+AGG + chr1_3:56447160-56447179 None:intergenic 40.0%
AAAGACAGCTTTCGGATGTT+AGG - chr1_3:56447399-56447418 Msa0127210:intron 40.0%
! CTTTTGCAGGCTTTCTTCAT+CGG - chr1_3:56447663-56447682 Msa0127210:intron 40.0%
TCCTTCTTGATTGCAAACTG+TGG + chr1_3:56447700-56447719 None:intergenic 40.0%
GGAAAAACCCAAAATACCTC+CGG + chr1_3:56448267-56448286 None:intergenic 40.0%
GATGAAGAAGAAGATTCCGA+TGG - chr1_3:56448918-56448937 Msa0127210:intron 40.0%
AACAACTGAAACTTGCGAAG+CGG + chr1_3:56448994-56449013 None:intergenic 40.0%
ATGGTGAATCCATCAATGAC+TGG + chr1_3:56449071-56449090 None:intergenic 40.0%
! GATGGATTCACCATCAAGAT+CGG - chr1_3:56449077-56449096 Msa0127210:intron 40.0%
AGGAATTTCACCGATCTTGA+TGG + chr1_3:56449090-56449109 None:intergenic 40.0%
! AGCACTCAGAACTTTGCTAT+TGG - chr1_3:56449134-56449153 Msa0127210:intron 40.0%
!! AAGACAGAAGCGTCGTAAAT+AGG + chr1_3:56449323-56449342 None:intergenic 40.0%
AGTCAGGAATCAGTCAGTTT+CGG - chr1_3:56449373-56449392 Msa0127210:intron 40.0%
! ATTGCGTTTTTCGTTTGCAC+AGG - chr1_3:56449489-56449508 Msa0127210:intron 40.0%
!!! TCGTTTTGGAGAAGCACATT+TGG - chr1_3:56449700-56449719 Msa0127210:intron 40.0%
!!! CGTTTTGGAGAAGCACATTT+GGG - chr1_3:56449701-56449720 Msa0127210:intron 40.0%
! CACGATCCTCCTTTGAAAAT+TGG + chr1_3:56449742-56449761 None:intergenic 40.0%
!! GCTTTTGGGAAGAACGATTT+TGG - chr1_3:56450028-56450047 Msa0127210:intron 40.0%
!! AAGCACTTCTGGAATAAGCA+TGG - chr1_3:56450140-56450159 Msa0127210:intron 40.0%
!! AGCACTTCTGGAATAAGCAT+GGG - chr1_3:56450141-56450160 Msa0127210:intron 40.0%
!! TTCTGGAATAAGCATGGGTA+AGG - chr1_3:56450146-56450165 Msa0127210:intron 40.0%
AATGAAGCCCAGTAATTTGG+AGG + chr1_3:56450257-56450276 None:intergenic 40.0%
GCTAATGAAGCCCAGTAATT+TGG + chr1_3:56450260-56450279 None:intergenic 40.0%
!!! TTCCCCATTTTGAGTTTGAG+GGG - chr1_3:56450387-56450406 Msa0127210:intron 40.0%
! ATGATACTTTGGAGGTTGTG+TGG + chr1_3:56450860-56450879 None:intergenic 40.0%
GTTAAAACCACAACGAATGG+AGG - chr1_3:56450996-56451015 Msa0127210:intron 40.0%
TGCAGTGTCAAAGATAGGTA+TGG - chr1_3:56451303-56451322 Msa0127210:intron 40.0%
!! CTTTATCGGCCGATTTTGTA+AGG + chr1_3:56451604-56451623 None:intergenic 40.0%
AAAATCGGCCGATAAAGTAG+AGG - chr1_3:56451607-56451626 Msa0127210:intron 40.0%
CTTCTTTCTCAAGCCTCAAT+GGG - chr1_3:56452004-56452023 Msa0127210:intron 40.0%
TATCATATGCCTACCCATTG+AGG + chr1_3:56452020-56452039 None:intergenic 40.0%
AAGACTCACAAAAGATGGCA+TGG + chr1_3:56452206-56452225 None:intergenic 40.0%
CTCTCAAGACTCACAAAAGA+TGG + chr1_3:56452211-56452230 None:intergenic 40.0%
!! GAAAGTACCTTTGGATTGAC+AGG + chr1_3:56452370-56452389 None:intergenic 40.0%
TAGACTCATTATGAGACCAC+TGG - chr1_3:56452457-56452476 Msa0127210:intron 40.0%
CAGTGTCTCTCCAAATTTCA+GGG + chr1_3:56452483-56452502 None:intergenic 40.0%
AAATTTGGAGAGACACTGGA+GGG - chr1_3:56452485-56452504 Msa0127210:intron 40.0%
AGAATTGATGCTTTGGTTGC+AGG - chr1_3:56452508-56452527 Msa0127210:intron 40.0%
GAATTGATGCTTTGGTTGCA+GGG - chr1_3:56452509-56452528 Msa0127210:intron 40.0%
! GAAAGTGCAATTCTGAATGG+AGG - chr1_3:56452735-56452754 Msa0127210:intron 40.0%
AAAGGCAAACACCTAATCCA+AGG - chr1_3:56452917-56452936 Msa0127210:CDS 40.0%
AAGGCAAACACCTAATCCAA+GGG - chr1_3:56452918-56452937 Msa0127210:CDS 40.0%
AAACACCTAATCCAAGGGAT+CGG - chr1_3:56452923-56452942 Msa0127210:CDS 40.0%
GACACATTGAGCATGAAAGT+TGG - chr1_3:56453303-56453322 Msa0127210:intron 40.0%
!!! GGATTCTGTTTTGACCAACA+AGG - chr1_3:56453587-56453606 Msa0127210:intron 40.0%
!! AAGCTGCTTGCTTTGAAAGA+AGG - chr1_3:56453655-56453674 Msa0127210:intron 40.0%
TTGCAGATGGGAATTTCATC+AGG - chr1_3:56444577-56444596 Msa0127210:intron 40.0%
CAGCAGCAGCAATAAAACTA+GGG - chr1_3:56453979-56453998 Msa0127210:intron 40.0%
TTTCCAAATTGTTGTGCAGG+TGG - chr1_3:56454138-56454157 Msa0127210:intron 40.0%
AAACCACCTGCACAACAATT+TGG + chr1_3:56454144-56454163 None:intergenic 40.0%
! CAGGTGGTTTTTCCTAGTTT+TGG - chr1_3:56454154-56454173 Msa0127210:intron 40.0%
AAGTAACGCTCTCCAAAACT+AGG + chr1_3:56454169-56454188 None:intergenic 40.0%
!! CAATACTTTTTGAGCCCATC+AGG - chr1_3:56454194-56454213 Msa0127210:intron 40.0%
GGGGAACATATCTAGATGAA+TGG + chr1_3:56445558-56445577 None:intergenic 40.0%
AGCAACAACATGCAAGTTTG+TGG + chr1_3:56454793-56454812 None:intergenic 40.0%
TTCTTATACTACCGTTGGGT+GGG - chr1_3:56454888-56454907 Msa0127210:intron 40.0%
! TGCTTGACACGTTTTCAGTA+TGG - chr1_3:56455050-56455069 Msa0127210:intron 40.0%
! GCTTGACACGTTTTCAGTAT+GGG - chr1_3:56455051-56455070 Msa0127210:intron 40.0%
! TGAAGGGGTGTATTAGACAA+AGG - chr1_3:56445907-56445926 Msa0127210:intron 40.0%
! GAAGGGGTGTATTAGACAAA+GGG - chr1_3:56445908-56445927 Msa0127210:intron 40.0%
ACACTATCACCCATATAGGT+AGG - chr1_3:56455487-56455506 Msa0127210:intron 40.0%
! CTACATACTCAAGCTTTTGC+AGG - chr1_3:56455736-56455755 Msa0127210:intron 40.0%
TCCTTCTTGATTGCAATCTG+TGG + chr1_3:56455786-56455805 None:intergenic 40.0%
! AATCACGTCTTTTCCCTTGA+AGG - chr1_3:56455992-56456011 Msa0127210:intron 40.0%
! ATCACGTCTTTTCCCTTGAA+GGG - chr1_3:56455993-56456012 Msa0127210:intron 40.0%
!!! TTTTCCCTTGAAGGGCATTT+TGG - chr1_3:56456001-56456020 Msa0127210:intron 40.0%
ATGACCAAAATGCCCTTCAA+GGG + chr1_3:56456008-56456027 None:intergenic 40.0%
AATGACCAAAATGCCCTTCA+AGG + chr1_3:56456009-56456028 None:intergenic 40.0%
!!! TGAAGGGCATTTTGGTCATT+TGG - chr1_3:56456009-56456028 Msa0127210:intron 40.0%
!!! GAAGGGCATTTTGGTCATTT+GGG - chr1_3:56456010-56456029 Msa0127210:intron 40.0%
GGGAAAATTCTGGATAGATC+AGG + chr1_3:56456092-56456111 None:intergenic 40.0%
AAGAATGGAGGGGAAAATTC+TGG + chr1_3:56456102-56456121 None:intergenic 40.0%
GAGAAGAAGAAAGAATGGAG+GGG + chr1_3:56456112-56456131 None:intergenic 40.0%
GAGAGAAGAAGAAAGAATGG+AGG + chr1_3:56456114-56456133 None:intergenic 40.0%
CGTGAGAGAAGAAGAAAGAA+TGG + chr1_3:56456117-56456136 None:intergenic 40.0%
GGATGATTGATGAGAATGGA+GGG + chr1_3:56456144-56456163 None:intergenic 40.0%
TCGGTTAAAGAGAAGAGGAA+GGG + chr1_3:56456254-56456273 None:intergenic 40.0%
TTCGGTTAAAGAGAAGAGGA+AGG + chr1_3:56456255-56456274 None:intergenic 40.0%
CTTGCTTGATTCAACATCCA+AGG + chr1_3:56456291-56456310 None:intergenic 40.0%
! GTTTGGAATTGTGGGAATCA+TGG - chr1_3:56456474-56456493 Msa0127210:intron 40.0%
GGTTGAATTCCATGAAATGG+TGG - chr1_3:56456495-56456514 Msa0127210:intron 40.0%
GAATTCCATGAAATGGTGGT+AGG - chr1_3:56456499-56456518 Msa0127210:intron 40.0%
GGATAATCCTGCTGAAAAAC+AGG - chr1_3:56456664-56456683 Msa0127210:intron 40.0%
TCCTGCTGAAAAACAGGTTA+CGG - chr1_3:56456670-56456689 Msa0127210:intron 40.0%
! GAAAAACAGGTTACGGGTTT+TGG - chr1_3:56456677-56456696 Msa0127210:intron 40.0%
GACGAATGCAGAAGTGATTA+CGG - chr1_3:56456731-56456750 Msa0127210:intron 40.0%
ACGAATGCAGAAGTGATTAC+GGG - chr1_3:56456732-56456751 Msa0127210:intron 40.0%
GATCATTAGAGATATGACGC+CGG - chr1_3:56456797-56456816 Msa0127210:intron 40.0%
TGCGGTTATAATGACGATCT+AGG - chr1_3:56457293-56457312 Msa0127210:intron 40.0%
!! GGTGCACCTAGTATTGATTT+CGG - chr1_3:56457314-56457333 Msa0127210:intron 40.0%
CCCTAACCGAAATCAATACT+AGG + chr1_3:56457323-56457342 None:intergenic 40.0%
GAAAAGAGCTATCCGTTAGA+TGG - chr1_3:56457456-56457475 Msa0127210:intron 40.0%
TTGTGTGTTTCCCTTCTAGT+TGG - chr1_3:56457890-56457909 Msa0127210:intron 40.0%
CATCTTTCTACTTAGCTGCT+TGG + chr1_3:56457985-56458004 None:intergenic 40.0%
! AAGTTCATCTGTGTCACTCT+TGG - chr1_3:56458017-56458036 Msa0127210:intron 40.0%
! TCAGAGTATCTGCAGCTATA+TGG - chr1_3:56458088-56458107 Msa0127210:intron 40.0%
TCTGCAGCTATATGGAGTTT+AGG - chr1_3:56458096-56458115 Msa0127210:intron 40.0%
CCAAAAACACTTATCGTGAC+CGG + chr1_3:56458356-56458375 None:intergenic 40.0%
! CGGTCACGATAAGTGTTTTT+GGG - chr1_3:56458354-56458373 Msa0127210:intron 40.0%
AAAAGTAGCATTTCGTACGG+TGG - chr1_3:56458839-56458858 Msa0127210:intron 40.0%
CTATTAGTGCTTTGTCAACC+CGG - chr1_3:56459002-56459021 Msa0127210:intron 40.0%
ACTCTAACAATTTGGCAGAG+GGG - chr1_3:56459874-56459893 Msa0127210:intron 40.0%
GTTAATAGGGAACACACCAT+TGG - chr1_3:56441710-56441729 Msa0127210:CDS 40.0%
CTCTCAAGACTCACAAAAGA+TGG + chr1_3:56452211-56452230 None:intergenic 40.0%
TAGACTCATTATGAGACCAC+TGG - chr1_3:56452457-56452476 Msa0127210:intron 40.0%
AGAATTGATGCTATGGTTGC+AGG - chr1_3:56461611-56461630 Msa0127210:intron 40.0%
GAATTGATGCTATGGTTGCA+GGG - chr1_3:56461612-56461631 Msa0127210:intron 40.0%
! ATTTTGAATGGAGGAAAGCC+AGG - chr1_3:56461848-56461867 Msa0127210:intron 40.0%
AAAGGCGAACATCTAATCCA+AGG - chr1_3:56462022-56462041 Msa0127210:intron 40.0%
!! CTAATCCAAGGTATCGGTAA+TGG - chr1_3:56462034-56462053 Msa0127210:intron 40.0%
AGCTTGCAACACTAATACAC+TGG - chr1_3:56462108-56462127 Msa0127210:intron 40.0%
!!! GGATTCTGTTTTGACCAACA+AGG - chr1_3:56453587-56453606 Msa0127210:intron 40.0%
!! AAGCTGCTTGCTTTGAAAGA+AGG - chr1_3:56453655-56453674 Msa0127210:intron 40.0%
AGCCTCCAAATATATAGGGA+CGG + chr1_3:56462726-56462745 None:intergenic 40.0%
TCCCTATATATTTGGAGGCT+CGG - chr1_3:56462726-56462745 Msa0127210:intron 40.0%
! AAATGAGTGTTTTCCATGCG+CGG + chr1_3:56463532-56463551 None:intergenic 40.0%
! AGCTAGGCCTCTAAATTTTG+GGG + chr1_3:56463656-56463675 None:intergenic 40.0%
! GAGCTAGGCCTCTAAATTTT+GGG + chr1_3:56463657-56463676 None:intergenic 40.0%
! TGAGCTAGGCCTCTAAATTT+TGG + chr1_3:56463658-56463677 None:intergenic 40.0%
TTGCAGATGGGAATTTCATC+AGG - chr1_3:56444577-56444596 Msa0127210:intron 40.0%
CAGCAGCTGCAATAAAACTA+GGG - chr1_3:56463897-56463916 Msa0127210:intron 40.0%
TGCGTCGAATACACATACTA+AGG + chr1_3:56463969-56463988 None:intergenic 40.0%
! CAGGTGGTTTTTCCTAGTTT+TGG - chr1_3:56454154-56454173 Msa0127210:intron 40.0%
AAGTAACGCTCTCCAAAACT+AGG + chr1_3:56454169-56454188 None:intergenic 40.0%
!!! CACCACTTTTTGAATCCATC+AGG - chr1_3:56464147-56464166 Msa0127210:CDS 40.0%
AGTCATTCTCATTCAAGCTG+TGG - chr1_3:56464224-56464243 Msa0127210:intron 40.0%
! GAATGACAACGTTTGGAGTT+TGG - chr1_3:56464286-56464305 Msa0127210:intron 40.0%
CGTTCAAATTCATGTCTGCA+TGG + chr1_3:56464332-56464351 None:intergenic 40.0%
CTTGCTGCAGTGTGAAAGAT+AGG - chr1_3:56441799-56441818 Msa0127210:intron 45.0%
TGCAGTGTGAAAGATAGGCA+TGG - chr1_3:56441804-56441823 Msa0127210:intron 45.0%
TGACAGCGACAGACAGTATT+TGG - chr1_3:56442313-56442332 Msa0127210:intron 45.0%
TATGTCTCCGTGCTTCACTA+CGG + chr1_3:56442396-56442415 None:intergenic 45.0%
GGTTGGGAGTTAGTTACTGT+AGG + chr1_3:56442467-56442486 None:intergenic 45.0%
CTAGTTGGTTATCAGACGGT+TGG + chr1_3:56442484-56442503 None:intergenic 45.0%
GTTCTTGTTGAGCCAACAAG+TGG - chr1_3:56442892-56442911 Msa0127210:intron 45.0%
!! GACAATACCTTTGGATTGGC+AGG + chr1_3:56443141-56443160 None:intergenic 45.0%
CAGAGTCTCTCCAAATCTCA+GGG + chr1_3:56443258-56443277 None:intergenic 45.0%
AGATTTGGAGAGACTCTGGA+GGG - chr1_3:56443260-56443279 Msa0127210:intron 45.0%
GAGGAACAGTAACAGGTGTT+GGG - chr1_3:56443317-56443336 Msa0127210:intron 45.0%
CTACACCATACACCTATAGG+GGG + chr1_3:56443446-56443465 None:intergenic 45.0%
!! GAAAGTCCAGTTCTGAATGG+AGG - chr1_3:56443474-56443493 Msa0127210:intron 45.0%
GACTTTCCTCCATTCAGAAC+TGG + chr1_3:56443483-56443502 None:intergenic 45.0%
! GTTCTGAATGGAGGAAAGTC+AGG - chr1_3:56443483-56443502 Msa0127210:intron 45.0%
AGTCCTTGATCAACCACTTG+AGG - chr1_3:56443714-56443733 Msa0127210:intron 45.0%
TGGTATCATTCCTCCTGTTC+TGG - chr1_3:56443806-56443825 Msa0127210:CDS 45.0%
AGATCAACTTCCAGAACAGG+AGG + chr1_3:56443819-56443838 None:intergenic 45.0%
CTAACATGATTGCTGATGGC+GGG + chr1_3:56444426-56444445 None:intergenic 45.0%
GCTAACATGATTGCTGATGG+CGG + chr1_3:56444427-56444446 None:intergenic 45.0%
GCTGCTGCTGCAATTAAACT+AGG - chr1_3:56444607-56444626 Msa0127210:intron 45.0%
GGGAAGAGACCAGAAAATGT+AGG - chr1_3:56444628-56444647 Msa0127210:intron 45.0%
! CAGGTGGTTTTTCCTAGTTC+TGG - chr1_3:56444981-56445000 Msa0127210:CDS 45.0%
!!! GTGGTTTTTCCTAGTTCTGG+AGG - chr1_3:56444984-56445003 Msa0127210:CDS 45.0%
TAAGTAACGCCTCCAGAACT+AGG + chr1_3:56444996-56445015 None:intergenic 45.0%
TTGTTCAGCTTCATGCCTGA+TGG + chr1_3:56445038-56445057 None:intergenic 45.0%
! TTTTGCGTTGTTCGGACATG+AGG - chr1_3:56445337-56445356 Msa0127210:intron 45.0%
TTTGCGTTGTTCGGACATGA+GGG - chr1_3:56445338-56445357 Msa0127210:intron 45.0%
TAGTGTCCAACTCACTTGTG+TGG + chr1_3:56445398-56445417 None:intergenic 45.0%
GGAAGAACACACACTTGAAG+GGG + chr1_3:56445537-56445556 None:intergenic 45.0%
GTCGTTTAGCCACCATTGTT+AGG - chr1_3:56445637-56445656 Msa0127210:intron 45.0%
ACTACTGTTGGGTCAAGAAG+GGG - chr1_3:56445704-56445723 Msa0127210:intron 45.0%
CTCACTTGTATGGATGCTCT+TGG + chr1_3:56445753-56445772 None:intergenic 45.0%
GAGCATCCATACAAGTGAGT+TGG - chr1_3:56445754-56445773 Msa0127210:intron 45.0%
CCGAACCAAACTGAACTGAA+CGG + chr1_3:56446241-56446260 None:intergenic 45.0%
CCGTTCAGTTCAGTTTGGTT+CGG - chr1_3:56446238-56446257 Msa0127210:intron 45.0%
!! CAGTTTGGTTCGGAACAGTT+TGG - chr1_3:56446248-56446267 Msa0127210:intron 45.0%
! TGGTTCGGAACAGTTTGGTT+TGG - chr1_3:56446253-56446272 Msa0127210:intron 45.0%
CGGTTCAGTTCGAAACAGTT+CGG - chr1_3:56446363-56446382 Msa0127210:intron 45.0%
CAGTTCGAAACAGTTCGGTT+CGG - chr1_3:56446368-56446387 Msa0127210:intron 45.0%
ATAGAGGTGGGCATATGGTT+CGG + chr1_3:56446498-56446517 None:intergenic 45.0%
CGGTTAAGCTGAAACTGTTC+TGG - chr1_3:56447478-56447497 Msa0127210:intron 45.0%
GCCACAGTTTGCAATCAAGA+AGG - chr1_3:56447696-56447715 Msa0127210:intron 45.0%
CGGTAGTTAACTACCATTGG+GGG + chr1_3:56448244-56448263 None:intergenic 45.0%
GCGGTAGTTAACTACCATTG+GGG + chr1_3:56448245-56448264 None:intergenic 45.0%
GGCGGTAGTTAACTACCATT+GGG + chr1_3:56448246-56448265 None:intergenic 45.0%
CAATGGTAGTTAACTACCGC+CGG - chr1_3:56448245-56448264 Msa0127210:intron 45.0%
AAAACCCAAAATACCTCCGG+CGG + chr1_3:56448264-56448283 None:intergenic 45.0%
! AACATGGTATCAGAGCGCTA+TGG - chr1_3:56448870-56448889 Msa0127210:intron 45.0%
AGAACACAAGGTTGCTGATG+CGG + chr1_3:56448970-56448989 None:intergenic 45.0%
TCAATGACTGGTGTGATCCA+TGG + chr1_3:56449059-56449078 None:intergenic 45.0%
TGGATCACACCAGTCATTGA+TGG - chr1_3:56449059-56449078 Msa0127210:intron 45.0%
GGCTTCAGAAACTGTGAACT+CGG + chr1_3:56449246-56449265 None:intergenic 45.0%
! GATACCGTTTTCTCATGCTC+TGG - chr1_3:56449296-56449315 Msa0127210:intron 45.0%
AGGTCCAGAGCATGAGAAAA+CGG + chr1_3:56449303-56449322 None:intergenic 45.0%
TTCTGTCTTCGTCGGAAAAC+AGG - chr1_3:56449334-56449353 Msa0127210:intron 45.0%
AACAAGCTGTAATCGCAGTC+AGG - chr1_3:56449357-56449376 Msa0127210:intron 45.0%
! GCACAGGCTTTGATATCGAT+CGG - chr1_3:56449505-56449524 Msa0127210:intron 45.0%
GCTTTGATATCGATCGGTTG+TGG - chr1_3:56449511-56449530 Msa0127210:intron 45.0%
TTGATATCGATCGGTTGTGG+TGG - chr1_3:56449514-56449533 Msa0127210:intron 45.0%
GCATGGGTAAGGTTGTTAAG+AGG - chr1_3:56450157-56450176 Msa0127210:intron 45.0%
TTGGGCATCCTCCAAATTAC+TGG - chr1_3:56450246-56450265 Msa0127210:intron 45.0%
TGGGCATCCTCCAAATTACT+GGG - chr1_3:56450247-56450266 Msa0127210:intron 45.0%
!!! TCCCCATTTTGAGTTTGAGG+GGG - chr1_3:56450388-56450407 Msa0127210:intron 45.0%
TCCCCCCTCAAACTCAAAAT+GGG + chr1_3:56450393-56450412 None:intergenic 45.0%
TTCAACTCCTCCATTCGTTG+TGG + chr1_3:56451006-56451025 None:intergenic 45.0%
GTTAACAGGGAACACACCAT+TGG - chr1_3:56451209-56451228 Msa0127210:intron 45.0%
CTTGCTGCAGTGTCAAAGAT+AGG - chr1_3:56451298-56451317 Msa0127210:intron 45.0%
TGGCTTCATTACTCCTGGAA+AGG - chr1_3:56451466-56451485 Msa0127210:intron 45.0%
GCACCCATCCTCTACTTTAT+CGG + chr1_3:56451618-56451637 None:intergenic 45.0%
AGATTAGAGGTCGGAGTAGT+GGG + chr1_3:56451699-56451718 None:intergenic 45.0%
TAGATTAGAGGTCGGAGTAG+TGG + chr1_3:56451700-56451719 None:intergenic 45.0%
TGAGGCTTGAGAAAGAAGGA+TGG + chr1_3:56452002-56452021 None:intergenic 45.0%
CCATTGAGGCTTGAGAAAGA+AGG + chr1_3:56452006-56452025 None:intergenic 45.0%
CCTTCTTTCTCAAGCCTCAA+TGG - chr1_3:56452003-56452022 Msa0127210:intron 45.0%
TTTCTCAAGCCTCAATGGGT+AGG - chr1_3:56452008-56452027 Msa0127210:intron 45.0%
GTTCTTGTTGAGGCTACTAG+TGG - chr1_3:56452121-56452140 Msa0127210:intron 45.0%
AGGGTCTGTCAGATATACCT+TGG + chr1_3:56452260-56452279 None:intergenic 45.0%
CCAGTGTCTCTCCAAATTTC+AGG + chr1_3:56452484-56452503 None:intergenic 45.0%
CCTGAAATTTGGAGAGACAC+TGG - chr1_3:56452481-56452500 Msa0127210:intron 45.0%
GAAATTTGGAGAGACACTGG+AGG - chr1_3:56452484-56452503 Msa0127210:intron 45.0%
TGGAGGGAGAATTGATGCTT+TGG - chr1_3:56452501-56452520 Msa0127210:intron 45.0%
! TACTTTTCCCCCTAGGTGTA+TGG - chr1_3:56452699-56452718 Msa0127210:intron 45.0%
TTCTACACCATACACCTAGG+GGG + chr1_3:56452709-56452728 None:intergenic 45.0%
GTTCTACACCATACACCTAG+GGG + chr1_3:56452710-56452729 None:intergenic 45.0%
GGTTCTACACCATACACCTA+GGG + chr1_3:56443450-56443469 None:intergenic 45.0%
! TGGTTCTACACCATACACCT+AGG + chr1_3:56443451-56443470 None:intergenic 45.0%
ATTCTGAATGGAGGAAAGCC+AGG - chr1_3:56452744-56452763 Msa0127210:intron 45.0%
CATCTAGGAGATCAAGATCC+AGG + chr1_3:56452970-56452989 None:intergenic 45.0%
! TGACAAAGCTTTGTCTCACC+AGG - chr1_3:56453436-56453455 Msa0127210:intron 45.0%
GCAGCAGCAGCAATAAAACT+AGG - chr1_3:56453978-56453997 Msa0127210:intron 45.0%
GGGAAGAGACAAGAAAATGC+AGG - chr1_3:56453999-56454018 Msa0127210:intron 45.0%
TGTTCAGCTTCATGCCTGAT+GGG + chr1_3:56445037-56445056 None:intergenic 45.0%
TTGTTCAGCTTCATGCCTGA+TGG + chr1_3:56445038-56445057 None:intergenic 45.0%
! TTTTGCGTTGTTCGGACATG+AGG - chr1_3:56445337-56445356 Msa0127210:intron 45.0%
GGAAGAACACACACTTGAAG+AGG + chr1_3:56445537-56445556 None:intergenic 45.0%
GCATGTTGTTGCTCCATCAA+CGG - chr1_3:56454800-56454819 Msa0127210:intron 45.0%
CATGTTGTTGCTCCATCAAC+GGG - chr1_3:56454801-56454820 Msa0127210:intron 45.0%
GTTCTTATACTACCGTTGGG+TGG - chr1_3:56454887-56454906 Msa0127210:intron 45.0%
GATCTTCAAATCCCACCCAA+CGG + chr1_3:56454902-56454921 None:intergenic 45.0%
CTCACTTGTGTGGATACTCT+TGG + chr1_3:56454936-56454955 None:intergenic 45.0%
GCCACAGATTGCAATCAAGA+AGG - chr1_3:56455782-56455801 Msa0127210:intron 45.0%
TGATTGATGAGAATGGAGGG+AGG + chr1_3:56456141-56456160 None:intergenic 45.0%
GGGATGATTGATGAGAATGG+AGG + chr1_3:56456145-56456164 None:intergenic 45.0%
GTTAAAGAGAAGAGGAAGGG+AGG + chr1_3:56456251-56456270 None:intergenic 45.0%
! TGGGTTCGGTTAAAGAGAAG+AGG + chr1_3:56456259-56456278 None:intergenic 45.0%
GATTCAACATCCAAGGGTGA+TGG + chr1_3:56456284-56456303 None:intergenic 45.0%
GCTAGAAGCAAGAAGTAGAG+AGG - chr1_3:56456362-56456381 Msa0127210:intron 45.0%
! TCGGAAAGTGCGTTTGAAGT+TGG - chr1_3:56456643-56456662 Msa0127210:intron 45.0%
CCTGCTGAAAAACAGGTTAC+GGG - chr1_3:56456671-56456690 Msa0127210:intron 45.0%
CGAATGCAGAAGTGATTACG+GGG - chr1_3:56456733-56456752 Msa0127210:intron 45.0%
! GAAGAAGCATGTGAAGCATC+CGG + chr1_3:56456819-56456838 None:intergenic 45.0%
GATGCTTCACATGCTTCTTC+AGG - chr1_3:56456819-56456838 Msa0127210:intron 45.0%
TTCACATGCTTCTTCAGGAG+TGG - chr1_3:56456824-56456843 Msa0127210:intron 45.0%
GGGAGAGTTACTCCATTAGA+TGG - chr1_3:56457340-56457359 Msa0127210:intron 45.0%
TAATGGTGGCCTTTCCATAG+GGG + chr1_3:56457371-56457390 None:intergenic 45.0%
CTAATGGTGGCCTTTCCATA+GGG + chr1_3:56457372-56457391 None:intergenic 45.0%
TAATGGTGGCCTTTCCATAG+GGG + chr1_3:56457371-56457390 None:intergenic 45.0%
CTAATGGTGGCCTTTCCATA+GGG + chr1_3:56457372-56457391 None:intergenic 45.0%
! TGTGTTTCCCTTCTAGTTGG+TGG - chr1_3:56457893-56457912 Msa0127210:intron 45.0%
ACAACCACCACCAACTAGAA+GGG + chr1_3:56457903-56457922 None:intergenic 45.0%
AACAACCACCACCAACTAGA+AGG + chr1_3:56457904-56457923 None:intergenic 45.0%
TGTCTCTCACTAAGTCCTTG+TGG - chr1_3:56457923-56457942 Msa0127210:intron 45.0%
! TTCATCTGTGTCACTCTTGG+TGG - chr1_3:56458020-56458039 Msa0127210:intron 45.0%
AGTGTTGTCAATAGGCTTGC+CGG - chr1_3:56458307-56458326 Msa0127210:intron 45.0%
CGAACTAGAACAACCTAGTC+CGG + chr1_3:56458329-56458348 None:intergenic 45.0%
! CCGGTCACGATAAGTGTTTT+TGG - chr1_3:56458353-56458372 Msa0127210:intron 45.0%
CGGTACTTCAGCTACATGTT+AGG + chr1_3:56459043-56459062 None:intergenic 45.0%
CTATCTTTGACACTGCAGCA+GGG + chr1_3:56451300-56451319 None:intergenic 45.0%
TCTCACTCAGGATAGCATTG+AGG - chr1_3:56451420-56451439 Msa0127210:intron 45.0%
AGGTCTCATTACTCCTGCAA+AGG - chr1_3:56460908-56460927 Msa0127210:intron 45.0%
GACTGTTCTTGTTGAGGCTA+CGG - chr1_3:56461215-56461234 Msa0127210:intron 45.0%
ACTGTTCTTGTTGAGGCTAC+GGG - chr1_3:56461216-56461235 Msa0127210:intron 45.0%
AGGGTCTGTCAGATATACCT+CGG + chr1_3:56452260-56452279 None:intergenic 45.0%
CAGTGTCTCTCCAAATCTCA+GGG + chr1_3:56461586-56461605 None:intergenic 45.0%
AGATTTGGAGAGACACTGGA+GGG - chr1_3:56461588-56461607 Msa0127210:intron 45.0%
TGGAGGGAGAATTGATGCTA+TGG - chr1_3:56461604-56461623 Msa0127210:intron 45.0%
CTATGTAAATTTCCCGCCCT+AGG - chr1_3:56461796-56461815 Msa0127210:intron 45.0%
GGTTCTACACCATACACCTA+GGG + chr1_3:56443450-56443469 None:intergenic 45.0%
! TGGTTCTACACCATACACCT+AGG + chr1_3:56443451-56443470 None:intergenic 45.0%
CATCTAGGAGATCAAGATCC+AGG + chr1_3:56452970-56452989 None:intergenic 45.0%
! TGACAAAGCTTTGTCTCACC+AGG - chr1_3:56453436-56453455 Msa0127210:intron 45.0%
! TAATGGATATGCATCAGGGC+AGG - chr1_3:56462699-56462718 Msa0127210:intron 45.0%
AATGGATATGCATCAGGGCA+GGG - chr1_3:56462700-56462719 Msa0127210:intron 45.0%
GCCGAGCCTCCAAATATATA+GGG + chr1_3:56462730-56462749 None:intergenic 45.0%
AGCCGAGCCTCCAAATATAT+AGG + chr1_3:56462731-56462750 None:intergenic 45.0%
! AATGAGTGTTTTCCATGCGC+GGG + chr1_3:56463531-56463550 None:intergenic 45.0%
CAATTGTTCTCTTGTCCCAG+TGG + chr1_3:56463558-56463577 None:intergenic 45.0%
TTTGGGCCCCCAAAATTTAG+AGG - chr1_3:56463646-56463665 Msa0127210:intron 45.0%
! GCTAGGCCTCTAAATTTTGG+GGG + chr1_3:56463655-56463674 None:intergenic 45.0%
GCAGCAGCTGCAATAAAACT+AGG - chr1_3:56463896-56463915 Msa0127210:intron 45.0%
GGGAAGAGACAAGAAAATGC+AGG - chr1_3:56453999-56454018 Msa0127210:intron 45.0%
CAAAATCGTTGTTGTGCAGG+TGG - chr1_3:56464091-56464110 Msa0127210:intron 45.0%
!! CGCCTGATGGATTCAAAAAG+TGG + chr1_3:56464152-56464171 None:intergenic 45.0%
!! ATAAACTAATAAATATAATA+AGG - chr1_3:56444816-56444835 Msa0127210:intron 5.0%
!!! TTTATATATATATTTTTCAA+TGG - chr1_3:56446323-56446342 Msa0127210:intron 5.0%
!!! TGTATTTTTTTTTTTTTTTA+AGG - chr1_3:56448422-56448441 Msa0127210:intron 5.0%
!!! ATTATTTTTATTTTTTTGAA+AGG + chr1_3:56450693-56450712 None:intergenic 5.0%
!!! AAATAGAATTTTTAAAAAAT+CGG + chr1_3:56454501-56454520 None:intergenic 5.0%
!! ATAATAATAATTAAAATAAG+CGG + chr1_3:56456898-56456917 None:intergenic 5.0%
!!! CTTATTTTAATTATTATTAT+TGG - chr1_3:56456898-56456917 Msa0127210:intron 5.0%
!!! ACTTTTTATTTTTATTTTTA+AGG - chr1_3:56459068-56459087 Msa0127210:intron 5.0%
!!! TTATATTTTTATTTTATTAG+GGG + chr1_3:56462770-56462789 None:intergenic 5.0%
!! AAATTTAATAAAAGAAAAAA+AGG - chr1_3:56463168-56463187 Msa0127210:intron 5.0%
AGGTCTCATTACTCCGGGAA+AGG - chr1_3:56441967-56441986 Msa0127210:CDS 50.0%
GAGCCAACAAGTGGTAACAC+CGG - chr1_3:56442901-56442920 Msa0127210:intron 50.0%
!! ATGCCGGTGTTACCACTTGT+TGG + chr1_3:56442907-56442926 None:intergenic 50.0%
ACAAGTGGTAACACCGGCAT+AGG - chr1_3:56442907-56442926 Msa0127210:intron 50.0%
TGGTAACACCGGCATAGGAT+TGG - chr1_3:56442912-56442931 Msa0127210:intron 50.0%
TATCGACGCCAATCCTATGC+CGG + chr1_3:56442923-56442942 None:intergenic 50.0%
!!! ACTCAGAGCTTTTGGAGCTG+AGG - chr1_3:56443011-56443030 Msa0127210:intron 50.0%
CCAGAGTCTCTCCAAATCTC+AGG + chr1_3:56443259-56443278 None:intergenic 50.0%
CCTGAGATTTGGAGAGACTC+TGG - chr1_3:56443256-56443275 Msa0127210:intron 50.0%
GAGATTTGGAGAGACTCTGG+AGG - chr1_3:56443259-56443278 Msa0127210:intron 50.0%
GATGCTTTGGTTGCAGGGAT+AGG - chr1_3:56443289-56443308 Msa0127210:intron 50.0%
TTGGTTGCAGGGATAGGAAC+TGG - chr1_3:56443295-56443314 Msa0127210:intron 50.0%
GGAACTGGAGGAACAGTAAC+AGG - chr1_3:56443310-56443329 Msa0127210:intron 50.0%
GGAGGAACAGTAACAGGTGT+TGG - chr1_3:56443316-56443335 Msa0127210:intron 50.0%
GCTTTCCCCCTATAGGTGTA+TGG - chr1_3:56443438-56443457 Msa0127210:intron 50.0%
CAGCCTCAAGTGGTTGATCA+AGG + chr1_3:56443720-56443739 None:intergenic 50.0%
ATAAGGGGAAGGAAGGATGG+TGG + chr1_3:56444376-56444395 None:intergenic 50.0%
! ATGGCGGGACAGTTAGTTAG+GGG + chr1_3:56444411-56444430 None:intergenic 50.0%
!! GATGGCGGGACAGTTAGTTA+GGG + chr1_3:56444412-56444431 None:intergenic 50.0%
!! TGATGGCGGGACAGTTAGTT+AGG + chr1_3:56444413-56444432 None:intergenic 50.0%
TTGCGTTGTTCGGACATGAG+GGG - chr1_3:56445339-56445358 Msa0127210:intron 50.0%
TAAACGACGTGTCCCGTTGA+TGG + chr1_3:56445625-56445644 None:intergenic 50.0%
CTACTGTTGGGTCAAGAAGG+GGG - chr1_3:56445705-56445724 Msa0127210:intron 50.0%
CTTAAGATACCTTGCGAGGG+CGG + chr1_3:56447156-56447175 None:intergenic 50.0%
CAGTCACACACACACACACA+CGG - chr1_3:56447458-56447477 Msa0127210:intron 50.0%
CGGCGGTAGTTAACTACCAT+TGG + chr1_3:56448247-56448266 None:intergenic 50.0%
!!! AACTACCGCCGGAGGTATTT+TGG - chr1_3:56448256-56448275 Msa0127210:intron 50.0%
!!! ACTACCGCCGGAGGTATTTT+GGG - chr1_3:56448257-56448276 Msa0127210:intron 50.0%
TTGCGAAGCGGAAGAACACA+AGG + chr1_3:56448982-56449001 None:intergenic 50.0%
CTAATCCTCCTCCTTCACCA+TGG - chr1_3:56449039-56449058 Msa0127210:intron 50.0%
ACTGGTGTGATCCATGGTGA+AGG + chr1_3:56449053-56449072 None:intergenic 50.0%
TACGACGCTTCTGTCTTCGT+CGG - chr1_3:56449326-56449345 Msa0127210:intron 50.0%
GAACCACAGAGATTTCCGTC+GGG + chr1_3:56449438-56449457 None:intergenic 50.0%
CGAACCACAGAGATTTCCGT+CGG + chr1_3:56449439-56449458 None:intergenic 50.0%
!! ATCGGTTGTGGTGGATACCA+TGG - chr1_3:56449523-56449542 Msa0127210:intron 50.0%
!! TCGGTTGTGGTGGATACCAT+GGG - chr1_3:56449524-56449543 Msa0127210:intron 50.0%
CAGATTCTTTCCTCTGCCCA+TGG + chr1_3:56449543-56449562 None:intergenic 50.0%
CCCCCCTCAAACTCAAAATG+GGG + chr1_3:56450392-56450411 None:intergenic 50.0%
!!! CCCCATTTTGAGTTTGAGGG+GGG - chr1_3:56450389-56450408 Msa0127210:intron 50.0%
GTCCCCCCTCAAACTCAAAA+TGG + chr1_3:56450394-56450413 None:intergenic 50.0%
TCGGCCGATAAAGTAGAGGA+TGG - chr1_3:56451611-56451630 Msa0127210:intron 50.0%
CGGCCGATAAAGTAGAGGAT+GGG - chr1_3:56451612-56451631 Msa0127210:intron 50.0%
GATCGATGCCAATCCTATGC+CGG + chr1_3:56452152-56452171 None:intergenic 50.0%
TATCTGACAGACCCTGCCAA+AGG - chr1_3:56452265-56452284 Msa0127210:intron 50.0%
CTCCATCAACTCCTTTGGCA+GGG + chr1_3:56452279-56452298 None:intergenic 50.0%
ACTCCATCAACTCCTTTGGC+AGG + chr1_3:56452280-56452299 None:intergenic 50.0%
AGACCACTGGCCCTGAAATT+TGG - chr1_3:56452470-56452489 Msa0127210:intron 50.0%
TCTCCAAATTTCAGGGCCAG+TGG + chr1_3:56452476-56452495 None:intergenic 50.0%
GATGCTTTGGTTGCAGGGAT+AGG - chr1_3:56443289-56443308 Msa0127210:intron 50.0%
TTGGTTGCAGGGATAGGAAC+TGG - chr1_3:56443295-56443314 Msa0127210:intron 50.0%
TGGTTGCAGGGATAGGAACT+GGG - chr1_3:56443296-56443315 Msa0127210:intron 50.0%
GGAACTGGGGGAACAATAAC+AGG - chr1_3:56452535-56452554 Msa0127210:intron 50.0%
GGGGAACAATAACAGGTGCT+GGG - chr1_3:56452542-56452561 Msa0127210:intron 50.0%
!! CAGTACCGATCCCTTGGATT+AGG + chr1_3:56452931-56452950 None:intergenic 50.0%
CTAATCCAAGGGATCGGTAC+TGG - chr1_3:56452929-56452948 Msa0127210:CDS 50.0%
AGATCAAGATCCAGGACAGG+GGG + chr1_3:56452962-56452981 None:intergenic 50.0%
GAGATCAAGATCCAGGACAG+GGG + chr1_3:56452963-56452982 None:intergenic 50.0%
GGAGATCAAGATCCAGGACA+GGG + chr1_3:56452964-56452983 None:intergenic 50.0%
AGGAGATCAAGATCCAGGAC+AGG + chr1_3:56452965-56452984 None:intergenic 50.0%
TAAACGACGTGTCCCGTTGA+TGG + chr1_3:56445625-56445644 None:intergenic 50.0%
GTCGTTTAGCCACCATTGTC+AGG - chr1_3:56454828-56454847 Msa0127210:intron 50.0%
AGAGAAGAGGAAGGGAGGAA+TGG + chr1_3:56456246-56456265 None:intergenic 50.0%
! ACATCCAAGGGTGATGGTGT+GGG + chr1_3:56456278-56456297 None:intergenic 50.0%
! AACATCCAAGGGTGATGGTG+TGG + chr1_3:56456279-56456298 None:intergenic 50.0%
CTGTGCCTACCACCATTTCA+TGG + chr1_3:56456507-56456526 None:intergenic 50.0%
CATGAAATGGTGGTAGGCAC+AGG - chr1_3:56456505-56456524 Msa0127210:intron 50.0%
!! CCCGTAACCTGTTTTTCAGC+AGG + chr1_3:56456674-56456693 None:intergenic 50.0%
CCTAATGGTGGCCTTTCCAT+AGG + chr1_3:56457373-56457392 None:intergenic 50.0%
CCTATGGAAAGGCCACCATT+AGG - chr1_3:56457370-56457389 Msa0127210:intron 50.0%
ATGGAAAGGCCACCATTAGG+AGG - chr1_3:56457373-56457392 Msa0127210:intron 50.0%
TGATAGCCCTCTCCTCCTAA+TGG + chr1_3:56457388-56457407 None:intergenic 50.0%
AGGAGAGGGCTATCAATGAG+AGG - chr1_3:56457393-56457412 Msa0127210:intron 50.0%
ATAGGGGCAGCTCCATCTAA+CGG + chr1_3:56457471-56457490 None:intergenic 50.0%
CCTAATGGTGGCCTTTCCAT+AGG + chr1_3:56457373-56457392 None:intergenic 50.0%
CCTATGGAAAGGCCACCATT+AGG - chr1_3:56457370-56457389 Msa0127210:intron 50.0%
ATGGAAAGGCCACCATTAGG+AGG - chr1_3:56457373-56457392 Msa0127210:intron 50.0%
TGATAGCCCTCTCCTCCTAA+TGG + chr1_3:56457388-56457407 None:intergenic 50.0%
!! GTTTCCCTTCTAGTTGGTGG+TGG - chr1_3:56457896-56457915 Msa0127210:intron 50.0%
! TCTGTGTCACTCTTGGTGGT+AGG - chr1_3:56458024-56458043 Msa0127210:intron 50.0%
CAAAGTCTGAGTTCGAACCC+CGG + chr1_3:56459252-56459271 None:intergenic 50.0%
TGAGCTTAGCTCAGTTGGCA+AGG + chr1_3:56459292-56459311 None:intergenic 50.0%
TGCCAACTGAGCTAAGCTCA+CGG - chr1_3:56459292-56459311 Msa0127210:intron 50.0%
CCTATCTTTGACACTGCAGC+AGG + chr1_3:56451301-56451320 None:intergenic 50.0%
CCTGCTGCAGTGTCAAAGAT+AGG - chr1_3:56460738-56460757 Msa0127210:intron 50.0%
GATCGATGCCAATCCTATGC+CGG + chr1_3:56452152-56452171 None:intergenic 50.0%
TATCTGACAGACCCTGCCAA+AGG - chr1_3:56452265-56452284 Msa0127210:intron 50.0%
CTCCATCAACTCCTTTGGCA+GGG + chr1_3:56452279-56452298 None:intergenic 50.0%
ACTCCATCAACTCCTTTGGC+AGG + chr1_3:56452280-56452299 None:intergenic 50.0%
CCAGTGTCTCTCCAAATCTC+AGG + chr1_3:56461587-56461606 None:intergenic 50.0%
CCTGAGATTTGGAGAGACAC+TGG - chr1_3:56461584-56461603 Msa0127210:intron 50.0%
GAGATTTGGAGAGACACTGG+AGG - chr1_3:56461587-56461606 Msa0127210:intron 50.0%
GATGCTATGGTTGCAGGGAT+AGG - chr1_3:56461617-56461636 Msa0127210:intron 50.0%
ATGGTTGCAGGGATAGGAAC+TGG - chr1_3:56461623-56461642 Msa0127210:intron 50.0%
TGGTTGCAGGGATAGGAACT+GGG - chr1_3:56443296-56443315 Msa0127210:intron 50.0%
GGAACTGGGGGAACAATAAC+AGG - chr1_3:56452535-56452554 Msa0127210:intron 50.0%
GGGGAACAATAACAGGTGCT+GGG - chr1_3:56452542-56452561 Msa0127210:intron 50.0%
AATTTCCCGCCCTAGGTGTA+TGG - chr1_3:56461803-56461822 Msa0127210:intron 50.0%
TCTACACCATACACCTAGGG+CGG + chr1_3:56452708-56452727 None:intergenic 50.0%
TTGAATGGAGGAAAGCCAGG+TGG - chr1_3:56461851-56461870 Msa0127210:intron 50.0%
CGACACCATTACCGATACCT+TGG + chr1_3:56462042-56462061 None:intergenic 50.0%
AGATCAAGATCCAGGACAGG+GGG + chr1_3:56452962-56452981 None:intergenic 50.0%
GAGATCAAGATCCAGGACAG+GGG + chr1_3:56452963-56452982 None:intergenic 50.0%
GGAGATCAAGATCCAGGACA+GGG + chr1_3:56452964-56452983 None:intergenic 50.0%
AGGAGATCAAGATCCAGGAC+AGG + chr1_3:56452965-56452984 None:intergenic 50.0%
CAGGGCCGTCCCTATATATT+TGG - chr1_3:56462718-56462737 Msa0127210:intron 50.0%
GGCCGTCCCTATATATTTGG+AGG - chr1_3:56462721-56462740 Msa0127210:intron 50.0%
GCAAACAGCTCTACTGAGCT+AGG + chr1_3:56463672-56463691 None:intergenic 50.0%
TTCTTCAGCTTCACGCCTGA+TGG + chr1_3:56464165-56464184 None:intergenic 50.0%
TCTGTCGCTGTCAACTCCAG+CGG + chr1_3:56442306-56442325 None:intergenic 55.0%
TTCACTACGGTTGCTGGAGG+TGG + chr1_3:56442383-56442402 None:intergenic 55.0%
TGCTTCACTACGGTTGCTGG+AGG + chr1_3:56442386-56442405 None:intergenic 55.0%
CCAGCAACCGTAGTGAAGCA+CGG - chr1_3:56442386-56442405 Msa0127210:intron 55.0%
!! TGGCGTCGATAGCAGCAATG+AGG - chr1_3:56442932-56442951 Msa0127210:intron 55.0%
!! GGCGTCGATAGCAGCAATGA+GGG - chr1_3:56442933-56442952 Msa0127210:intron 55.0%
! GCGTCGATAGCAGCAATGAG+GGG - chr1_3:56442934-56442953 Msa0127210:intron 55.0%
AGACCACTGGCCCTGAGATT+TGG - chr1_3:56443245-56443264 Msa0127210:intron 55.0%
TCTCCAAATCTCAGGGCCAG+TGG + chr1_3:56443251-56443270 None:intergenic 55.0%
GTTGCAGGGATAGGAACTGG+AGG - chr1_3:56443298-56443317 Msa0127210:intron 55.0%
!! TGATACCAGCACCGATCCCT+TGG + chr1_3:56443794-56443813 None:intergenic 55.0%
TGCGTTGTTCGGACATGAGG+GGG - chr1_3:56445340-56445359 Msa0127210:intron 55.0%
!! GTGGGCATATGGTTCGGTTC+GGG + chr1_3:56446492-56446511 None:intergenic 55.0%
!! GGTGGGCATATGGTTCGGTT+CGG + chr1_3:56446493-56446512 None:intergenic 55.0%
GCGAGGGCGGACATATGTAT+TGG + chr1_3:56447143-56447162 None:intergenic 55.0%
TACATATGTCCGCCCTCGCA+AGG - chr1_3:56447144-56447163 Msa0127210:intron 55.0%
TGGTAGTTAACTACCGCCGG+AGG - chr1_3:56448248-56448267 Msa0127210:intron 55.0%
GTGATCCATGGTGAAGGAGG+AGG + chr1_3:56449047-56449066 None:intergenic 55.0%
GGTGTGATCCATGGTGAAGG+AGG + chr1_3:56449050-56449069 None:intergenic 55.0%
!! ATCGTCGACTTCGATCCCGA+CGG - chr1_3:56449420-56449439 Msa0127210:intron 55.0%
GATCCCGACGGAAATCTCTG+TGG - chr1_3:56449432-56449451 Msa0127210:intron 55.0%
GAGGCTACTAGTGGCAACAC+CGG - chr1_3:56452130-56452149 Msa0127210:intron 55.0%
ACTAGTGGCAACACCGGCAT+AGG - chr1_3:56452136-56452155 Msa0127210:intron 55.0%
TGGCAACACCGGCATAGGAT+TGG - chr1_3:56452141-56452160 Msa0127210:intron 55.0%
GACCCTGCCAAAGGAGTTGA+TGG - chr1_3:56452274-56452293 Msa0127210:intron 55.0%
GGTTGCAGGGATAGGAACTG+GGG - chr1_3:56443297-56443316 Msa0127210:intron 55.0%
GTTGCAGGGATAGGAACTGG+GGG - chr1_3:56443298-56443317 Msa0127210:intron 55.0%
GGGGGAACAATAACAGGTGC+TGG - chr1_3:56452541-56452560 Msa0127210:intron 55.0%
!! AGGTGCTGGGAAGTTCCTCA+AGG - chr1_3:56452555-56452574 Msa0127210:intron 55.0%
TGGATATGCATCGGGGCCAT+TGG - chr1_3:56453802-56453821 Msa0127210:intron 55.0%
TGCGTTGTTCGGACATGAGG+TGG - chr1_3:56445340-56445359 Msa0127210:intron 55.0%
! CAAGGGTGATGGTGTGGGTT+CGG + chr1_3:56456273-56456292 None:intergenic 55.0%
ATAGGGGCGGCTCCATCTAA+TGG + chr1_3:56457355-56457374 None:intergenic 55.0%
ATTAGATGGAGCCGCCCCTA+TGG - chr1_3:56457354-56457373 Msa0127210:intron 55.0%
AAGGCCACCATTAGGAGGAG+AGG - chr1_3:56457378-56457397 Msa0127210:intron 55.0%
AGGCCACCATTAGGAGGAGA+GGG - chr1_3:56457379-56457398 Msa0127210:intron 55.0%
TAGCCCTCTCCTCCTAATGG+TGG + chr1_3:56457385-56457404 None:intergenic 55.0%
GTTAGATGGAGCTGCCCCTA+TGG - chr1_3:56457470-56457489 Msa0127210:intron 55.0%
ATGGAGCTGCCCCTATGGAA+AGG - chr1_3:56457475-56457494 Msa0127210:intron 55.0%
AAGGCCACCATTAGGAGGAG+AGG - chr1_3:56457378-56457397 Msa0127210:intron 55.0%
AGGCCACCATTAGGAGGAGA+GGG - chr1_3:56457379-56457398 Msa0127210:intron 55.0%
TAGCCCTCTCCTCCTAATGG+TGG + chr1_3:56457385-56457404 None:intergenic 55.0%
GGAGAGGGCTATCAACGAGA+TGG - chr1_3:56457510-56457529 Msa0127210:intron 55.0%
GAGGGCTATCAACGAGATGG+AGG - chr1_3:56457513-56457532 Msa0127210:intron 55.0%
GTCAATAGGCTTGCCGGACT+AGG - chr1_3:56458313-56458332 Msa0127210:intron 55.0%
!! GGTTGTTCTAGTTCGTGCGC+CGG - chr1_3:56458334-56458353 Msa0127210:intron 55.0%
CTCCGTGAGCTTAGCTCAGT+TGG + chr1_3:56459297-56459316 None:intergenic 55.0%
GTTCTTGTTGAGGCTACGGG+TGG - chr1_3:56461219-56461238 Msa0127210:intron 55.0%
TGGCAACACCGGCATAGGAT+TGG - chr1_3:56452141-56452160 Msa0127210:intron 55.0%
GACCCTGCCAAAGGAGTTGA+TGG - chr1_3:56452274-56452293 Msa0127210:intron 55.0%
AGACCACTGGCCCTGAGATT+TGG - chr1_3:56443245-56443264 Msa0127210:intron 55.0%
TCTCCAAATCTCAGGGCCAG+TGG + chr1_3:56443251-56443270 None:intergenic 55.0%
GGTTGCAGGGATAGGAACTG+GGG - chr1_3:56443297-56443316 Msa0127210:intron 55.0%
GTTGCAGGGATAGGAACTGG+GGG - chr1_3:56443298-56443317 Msa0127210:intron 55.0%
GGGGGAACAATAACAGGTGC+TGG - chr1_3:56452541-56452560 Msa0127210:intron 55.0%
!! AGGTGCTGGGAAGTTCCTCA+AGG - chr1_3:56452555-56452574 Msa0127210:intron 55.0%
CTACACCATACACCTAGGGC+GGG + chr1_3:56461811-56461830 None:intergenic 55.0%
GGGTCAAGTGTTCAACACCC+AGG + chr1_3:56463511-56463530 None:intergenic 55.0%
TTGAACACTTGACCCGCGCA+TGG - chr1_3:56463516-56463535 Msa0127210:intron 55.0%
TGTTTGCACCCCCTCAAGGA+CGG - chr1_3:56463685-56463704 Msa0127210:intron 55.0%
GTACCAATGGCCCTGATGCA+GGG + chr1_3:56463711-56463730 None:intergenic 55.0%
AGTACCAATGGCCCTGATGC+AGG + chr1_3:56463712-56463731 None:intergenic 55.0%
CCGTGCTTCACTACGGTTGC+TGG + chr1_3:56442389-56442408 None:intergenic 60.0%
CGAATCCAAGGGATCGGTGC+TGG - chr1_3:56443786-56443805 Msa0127210:intron 60.0%
GCGGGACAGTTAGTTAGGGG+AGG + chr1_3:56444408-56444427 None:intergenic 60.0%
CGGACATGAGGGGGTTTGAG+AGG - chr1_3:56445349-56445368 Msa0127210:intron 60.0%
GTTGGGTCAAGAAGGGGGCA+TGG - chr1_3:56445710-56445729 Msa0127210:intron 60.0%
!! GTGGTGGATACCATGGGCAG+AGG - chr1_3:56449530-56449549 Msa0127210:intron 60.0%
! GCATCGATCGCAGCACTGAG+AGG - chr1_3:56452163-56452182 Msa0127210:intron 60.0%
!!! ACTGCGCGCTTTTGGAGCCA+AGG - chr1_3:56452240-56452259 Msa0127210:CDS 60.0%
!! CGACACCAGTACCGATCCCT+TGG + chr1_3:56452937-56452956 None:intergenic 60.0%
CGGACATGAGGTGGTCTGAG+AGG - chr1_3:56454539-56454558 Msa0127210:intron 60.0%
CGAACCCACACCATCACCCT+TGG - chr1_3:56456271-56456290 Msa0127210:intron 60.0%
ATGGAGCCGCCCCTATGGAA+AGG - chr1_3:56457359-56457378 Msa0127210:intron 60.0%
TGGTGGCCTTTCCATAGGGG+CGG + chr1_3:56457368-56457387 None:intergenic 60.0%
! GCATCGATCGCAGCACTGAG+AGG - chr1_3:56452163-56452182 Msa0127210:intron 60.0%
GAGCTGTTTGCACCCCCTCA+AGG - chr1_3:56463681-56463700 Msa0127210:intron 60.0%
TGATGCAGGGCCGTCCTTGA+GGG + chr1_3:56463698-56463717 None:intergenic 60.0%
TCAAGGACGGCCCTGCATCA+GGG - chr1_3:56463698-56463717 Msa0127210:intron 60.0%
!! TGGTGTCGTTCCCCCTGTCC+TGG - chr1_3:56452949-56452968 Msa0127210:CDS 65.0%
GAGGCTACGGGTGGCAACAC+CGG - chr1_3:56461228-56461247 Msa0127210:intron 65.0%
ACGGGTGGCAACACCGGCAT+AGG - chr1_3:56461234-56461253 Msa0127210:intron 65.0%
ACCTCGGCTCCGAAAGCTCG+CGG + chr1_3:56461342-56461361 None:intergenic 65.0%
!! TGGTGTCGTTCCCCCTGTCC+TGG - chr1_3:56452949-56452968 Msa0127210:CDS 65.0%
ATGCAGGGCCGTCCTTGAGG+GGG + chr1_3:56463696-56463715 None:intergenic 65.0%
GATGCAGGGCCGTCCTTGAG+GGG + chr1_3:56463697-56463716 None:intergenic 65.0%
CTGATGCAGGGCCGTCCTTG+AGG + chr1_3:56463699-56463718 None:intergenic 65.0%
CTCAAGGACGGCCCTGCATC+AGG - chr1_3:56463697-56463716 Msa0127210:intron 65.0%
ACCGCGAGCTTTCGGAGCCG+AGG - chr1_3:56461338-56461357 Msa0127210:intron 70.0%
CGGCCCTGCATCAGGGCCAT+TGG - chr1_3:56463705-56463724 Msa0127210:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 56441370 56464534 56441370 ID=Msa0127210;Name=Msa0127210
chr1_3 mRNA 56441370 56464534 56441370 ID=Msa0127210-mRNA-1;Parent=Msa0127210;Name=Msa0127210-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0.52|0.77|1|0.80|0.95|22|335|536
chr1_3 exon 56441370 56441794 56441370 ID=Msa0127210-mRNA-1:exon:17845;Parent=Msa0127210-mRNA-1
chr1_3 exon 56441952 56442032 56441952 ID=Msa0127210-mRNA-1:exon:17844;Parent=Msa0127210-mRNA-1
chr1_3 exon 56443799 56443878 56443799 ID=Msa0127210-mRNA-1:exon:17843;Parent=Msa0127210-mRNA-1
chr1_3 exon 56444035 56444086 56444035 ID=Msa0127210-mRNA-1:exon:17842;Parent=Msa0127210-mRNA-1
chr1_3 exon 56444204 56444341 56444204 ID=Msa0127210-mRNA-1:exon:17841;Parent=Msa0127210-mRNA-1
chr1_3 exon 56444975 56445032 56444975 ID=Msa0127210-mRNA-1:exon:17840;Parent=Msa0127210-mRNA-1
chr1_3 exon 56445644 56445651 56445644 ID=Msa0127210-mRNA-1:exon:17839;Parent=Msa0127210-mRNA-1
chr1_3 exon 56451852 56451950 56451852 ID=Msa0127210-mRNA-1:exon:17838;Parent=Msa0127210-mRNA-1
chr1_3 exon 56452220 56452279 56452220 ID=Msa0127210-mRNA-1:exon:17837;Parent=Msa0127210-mRNA-1
chr1_3 exon 56452904 56452983 56452904 ID=Msa0127210-mRNA-1:exon:17836;Parent=Msa0127210-mRNA-1
chr1_3 exon 56453139 56453190 56453139 ID=Msa0127210-mRNA-1:exon:17835;Parent=Msa0127210-mRNA-1
chr1_3 exon 56453307 56453444 56453307 ID=Msa0127210-mRNA-1:exon:17834;Parent=Msa0127210-mRNA-1
chr1_3 exon 56454417 56454474 56454417 ID=Msa0127210-mRNA-1:exon:17833;Parent=Msa0127210-mRNA-1
chr1_3 exon 56454585 56454694 56454585 ID=Msa0127210-mRNA-1:exon:17832;Parent=Msa0127210-mRNA-1
chr1_3 exon 56461241 56461321 56461241 ID=Msa0127210-mRNA-1:exon:17831;Parent=Msa0127210-mRNA-1
chr1_3 exon 56462047 56462126 56462047 ID=Msa0127210-mRNA-1:exon:17830;Parent=Msa0127210-mRNA-1
chr1_3 exon 56462400 56462451 56462400 ID=Msa0127210-mRNA-1:exon:17829;Parent=Msa0127210-mRNA-1
chr1_3 exon 56462532 56462669 56462532 ID=Msa0127210-mRNA-1:exon:17828;Parent=Msa0127210-mRNA-1
chr1_3 exon 56463916 56463973 56463916 ID=Msa0127210-mRNA-1:exon:17827;Parent=Msa0127210-mRNA-1
chr1_3 exon 56464147 56464193 56464147 ID=Msa0127210-mRNA-1:exon:17826;Parent=Msa0127210-mRNA-1
chr1_3 exon 56464337 56464380 56464337 ID=Msa0127210-mRNA-1:exon:17825;Parent=Msa0127210-mRNA-1
chr1_3 exon 56464528 56464534 56464528 ID=Msa0127210-mRNA-1:exon:17824;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56464528 56464534 56464528 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56464337 56464380 56464337 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56464147 56464193 56464147 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56463916 56463973 56463916 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56462532 56462669 56462532 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56462400 56462451 56462400 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56462047 56462126 56462047 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56461241 56461321 56461241 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56454585 56454694 56454585 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56454417 56454474 56454417 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56453307 56453444 56453307 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56453139 56453190 56453139 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56452904 56452983 56452904 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56452220 56452279 56452220 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56451852 56451950 56451852 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56445644 56445651 56445644 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56444975 56445032 56444975 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56444204 56444341 56444204 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56444035 56444086 56444035 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56443799 56443878 56443799 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56441952 56442032 56441952 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 CDS 56441705 56441794 56441705 ID=Msa0127210-mRNA-1:cds;Parent=Msa0127210-mRNA-1
chr1_3 three_prime_UTR 56441370 56441704 56441370 ID=Msa0127210-mRNA-1:three_prime_utr;Parent=Msa0127210-mRNA-1
Gene Sequence

>Msa0127210

ATGTCTAATAACATGGAGCCACAATGTGCAATCAAGAAAGATGTCACTGAATTAATAGGGAACACACCATTGGTATATCTAAACAACATAACAGAAGGGATAGCATTGAGCATGATTGAAGATGCTGAGAATAAAGGTCTCATTACTCCGGGAAAGATTCATTATGAGACCACTGGCCCTGAGATTTGGAGAGACTCTGGAGGGAAAATTGATGCTTTGGTTGCAGGGATAGGAACTGGAGGAACAGTAACAGGTGTTGGGAAGTTTCTTAAGGAGAAAAACCCAGAGATAAAGGTGTATGGTGTAGAACCAACTGAAAGTCCAGTTCTGAATGGAGGAAAGTCAGGCAATCATCGAATCCAAGGGATCGGTGCTGGTATCATTCCTCCTGTTCTGGAAGTTGATCTTCTAGATGAAGTTATTCAGATGGGAATTTCATCAGGAGCTGCAGCTGCTGCTGCAATTAAACTAGGGAAGAGACCAGAAAATGTAGGAAAGCTCATTGTTTTAACAGGGAACACACCATTGGTATATCTAAACAACATTACAGAAGGGTGTGTAGCTCGTATTGCTGCTAAGCTTGAATACTTGCAATCTTGCTGCAGTGTCAAAGATAGGATAGCATTGAGCATGATTGAAGATGCCGAAAATAATGGCTTCATTACTCCTGGAAAGACTCATTATGAGACCACTGGCCCTGAAATTTGGAGAGACACTGGAGGGAGAATTGATGCTTTGGTTGCAGGGATAGGAACTGGGGGAACAATAACAGGTGCTGGGAAGTTCCTCAAGGAGAGAAACTTAGATATCAAGGTGTATGGTGTAGAACCAACTGAAAGTGCAATTCTGAATGGAGGAAAGCCAGGCAAACACCTAATCCAAGGGATCGGTACTGGTGTCGTTCCCCCTGTCCTGGATCTTGATCTCCTAGATGAAGTTATTCAGGTTTCGAGTGAAGAAGCTATAGAAACTGCTAAGCTGCTTGCTTTGAAAGAAGGTTTACTGATGGGAATTTCATCAGGAGCTGCAGCAGCAGCAGCAATAAAACTAGGGAAGAGACAAGAAAATGCAGGAAAGCTCATTGTTGTAAGTTTACAAGCCTTAAAGAGCAGGATAGCATTGAGGATGATTGAAGATGCCGAAAATAAAGGTCTCATTACTCCTGCAAAGACTCATTATGAGACCACTGGCCCTGAGATTTGGAGAGACACTGGAGGGAGAATTGATGCTATGGTTGCAGGGATAGGAACTGGGGGAACAATAACAGGTGCTGGGAAGTTCCTCAAGGAGAGAAACTTAGATATCAAGGTGTATGGTGTAGAACCAACTGAAAGTGCAATTTTGAATGGAGGAAAGCCAGGCGAACATCTAATCCAAGGTATCGGTAATGGTGTCGTTCCCCCTGTCCTGGATCTTGATCTCCTAGATGAAGTTATTCAGATGGGAATTTCATCAGGAGCTGCAGCAGCAGCTGCAATAAAACTAGGGAAGAGACAAGAAAATGCAGGAAAGCTCATTGTTGTGGTTTTTCCTAGTTTTGGAGAGCGTTACTTATCTTCACCACTTTTTGAATCCATCAGGCGTGAAGCTGAAGAAATGACATTTGACTGA
Protein sequence

>Msa0127210

MSNNMEPQCAIKKDVTELIGNTPLVYLNNITEGIALSMIEDAENKGLITPGKIHYETTGPEIWRDSGGKIDALVAGIGTGGTVTGVGKFLKEKNPEIKVYGVEPTESPVLNGGKSGNHRIQGIGAGIIPPVLEVDLLDEVIQMGISSGAAAAAAIKLGKRPENVGKLIVLTGNTPLVYLNNITEGCVARIAAKLEYLQSCCSVKDRIALSMIEDAENNGFITPGKTHYETTGPEIWRDTGGRIDALVAGIGTGGTITGAGKFLKERNLDIKVYGVEPTESAILNGGKPGKHLIQGIGTGVVPPVLDLDLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKLGKRQENAGKLIVVSLQALKSRIALRMIEDAENKGLITPAKTHYETTGPEIWRDTGGRIDAMVAGIGTGGTITGAGKFLKERNLDIKVYGVEPTESAILNGGKPGEHLIQGIGNGVVPPVLDLDLLDEVIQMGISSGAAAAAAIKLGKRQENAGKLIVVVFPSFGERYLSSPLFESIRREAEEMTFD*