AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0766030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766030 MtrunA17_Chr6g0454151 88.542 480 55 0 1 480 1 480 0.0 864
Msa0766030 MtrunA17_Chr6g0454141 81.743 482 86 1 1 480 1 482 0.0 812
Msa0766030 MtrunA17_Chr6g0452771 81.535 482 87 1 1 480 1 482 0.0 803
Msa0766030 MtrunA17_Chr6g0454261 78.631 482 101 1 1 480 1 482 0.0 785
Msa0766030 MtrunA17_Chr6g0453961 73.706 483 124 2 1 480 10 492 0.0 744
Msa0766030 MtrunA17_Chr6g0454331 72.917 480 126 2 5 480 2 481 0.0 742
Msa0766030 MtrunA17_Chr6g0454191 74.741 483 119 2 1 480 1 483 0.0 737
Msa0766030 MtrunA17_Chr6g0454401 73.292 483 126 2 1 480 1 483 0.0 732
Msa0766030 MtrunA17_Chr6g0454291 74.268 478 121 1 5 480 2 479 0.0 726
Msa0766030 MtrunA17_Chr6g0454181 71.992 482 133 1 1 480 1 482 0.0 722
Msa0766030 MtrunA17_Chr8g0359821 73.444 482 124 3 1 480 1 480 0.0 720
Msa0766030 MtrunA17_Chr6g0454121 74.896 482 118 2 1 480 1 481 0.0 714
Msa0766030 MtrunA17_Chr6g0454211 71.518 481 135 1 2 480 289 769 0.0 707
Msa0766030 MtrunA17_Chr6g0454211 58.453 349 61 4 131 477 1 267 1.79e-124 380
Msa0766030 MtrunA17_Chr6g0453951 70.393 483 140 2 1 480 47 529 0.0 707
Msa0766030 MtrunA17_Chr6g0454131 73.029 482 127 2 1 480 1 481 0.0 704
Msa0766030 MtrunA17_Chr6g0454201 73.292 483 126 2 1 480 1 483 0.0 701
Msa0766030 MtrunA17_Chr6g0454361 72.050 483 132 2 1 480 1 483 0.0 700
Msa0766030 MtrunA17_Chr6g0454301 69.358 483 142 3 1 480 254 733 0.0 690
Msa0766030 MtrunA17_Chr6g0454301 78.947 228 48 0 249 476 1 228 4.42e-126 384
Msa0766030 MtrunA17_Chr3g0078841 69.151 483 143 3 1 480 1 480 0.0 686
Msa0766030 MtrunA17_Chr5g0423981 69.358 483 109 4 1 480 1 447 0.0 679
Msa0766030 MtrunA17_Chr6g0454351 67.975 484 134 3 1 480 1 467 0.0 679
Msa0766030 MtrunA17_Chr7g0217881 69.979 483 123 3 1 480 1 464 0.0 677
Msa0766030 MtrunA17_Chr6g0454341 67.702 483 150 3 1 480 1 480 0.0 677
Msa0766030 MtrunA17_Chr8g0336331 67.909 483 148 4 1 480 1 479 0.0 672
Msa0766030 MtrunA17_Chr6g0454321 67.158 475 150 3 1 472 1 472 0.0 654
Msa0766030 MtrunA17_Chr6g0454321 70.400 125 37 0 2 126 496 620 3.10e-52 187
Msa0766030 MtrunA17_Chr6g0454251 68.448 393 122 1 5 395 2 394 0.0 580
Msa0766030 MtrunA17_Chr6g0454171 76.271 354 38 3 131 480 1 312 0.0 527
Msa0766030 MtrunA17_Chr5g0426431 54.149 482 211 6 3 480 5 480 0.0 523
Msa0766030 MtrunA17_Chr3g0092641 53.053 475 213 6 9 479 11 479 1.51e-179 511
Msa0766030 MtrunA17_Chr2g0278711 53.236 479 210 6 7 479 8 478 1.80e-176 504
Msa0766030 MtrunA17_Chr3g0118771 48.218 477 237 5 7 478 18 489 5.70e-162 467
Msa0766030 MtrunA17_Chr3g0118691 46.888 482 246 5 2 478 7 483 8.34e-159 459
Msa0766030 MtrunA17_Chr6g0454271 72.318 289 78 1 194 480 1 289 4.53e-158 450
Msa0766030 MtrunA17_Chr3g0118671 46.653 478 245 5 6 478 2 474 2.55e-157 455
Msa0766030 MtrunA17_Chr3g0118711 46.250 480 248 5 4 478 7 481 1.03e-156 454
Msa0766030 MtrunA17_Chr8g0355011 59.892 369 104 2 114 480 38 364 3.37e-155 445
Msa0766030 MtrunA17_Chr4g0050341 48.000 475 235 7 8 474 17 487 5.52e-155 449
Msa0766030 MtrunA17_Chr3g0118701 45.436 482 253 5 2 478 7 483 1.09e-153 446
Msa0766030 MtrunA17_Chr3g0118661 47.368 475 241 4 7 477 10 479 2.38e-146 427
Msa0766030 MtrunA17_Chr3g0118751 45.493 477 223 6 6 478 2 445 7.35e-145 422
Msa0766030 MtrunA17_Chr6g0454221 82.096 229 40 1 249 476 1 229 7.37e-135 391
Msa0766030 MtrunA17_Chr5g0426401 53.526 312 139 4 173 479 2 312 6.30e-115 341
Msa0766030 MtrunA17_Chr6g0453981 66.667 231 75 1 131 359 1 231 6.48e-109 322
Msa0766030 MtrunA17_Chr3g0118721 50.000 290 140 3 194 478 1 290 5.15e-101 304
Msa0766030 MtrunA17_Chr6g0453941 67.117 222 70 2 132 350 54 275 8.35e-100 301
Msa0766030 MtrunA17_Chr6g0453941 68.254 63 15 2 1 62 1 59 3.46e-19 87.4
Msa0766030 MtrunA17_Chr6g0454231 63.137 255 55 3 225 478 3 219 8.48e-100 308
Msa0766030 MtrunA17_Chr6g0454231 60.417 240 90 2 1 238 241 477 1.48e-90 284
Msa0766030 MtrunA17_Chr6g0454281 70.256 195 58 0 1 195 1 195 7.22e-98 293
Msa0766030 MtrunA17_Chr8g0336271 56.048 248 103 3 1 246 1 244 1.70e-91 280
Msa0766030 MtrunA17_Chr6g0454371 75.145 173 43 0 308 480 1 173 3.90e-90 272
Msa0766030 MtrunA17_Chr3g0112771 35.430 477 260 14 12 478 14 452 3.86e-89 280
Msa0766030 MtrunA17_Chr5g0412111 34.490 490 264 10 9 475 4 459 6.22e-87 274
Msa0766030 MtrunA17_Chr5g0412131 35.656 488 262 12 9 475 11 467 6.41e-87 274
Msa0766030 MtrunA17_Chr5g0412101 34.504 484 274 11 9 475 11 468 2.94e-82 262
Msa0766030 MtrunA17_Chr3g0112761 33.474 475 274 15 12 478 10 450 1.55e-78 252
Msa0766030 MtrunA17_Chr8g0336261 79.562 137 28 0 308 444 1 137 8.43e-77 236
Msa0766030 MtrunA17_Chr4g0032331 33.125 480 269 15 12 478 10 450 1.30e-76 247
Msa0766030 MtrunA17_Chr6g0454111 72.050 161 42 2 171 328 23 183 1.75e-76 238
Msa0766030 MtrunA17_Chr4g0053501 31.148 488 288 18 10 480 11 467 1.05e-70 233
Msa0766030 MtrunA17_Chr7g0218831 30.316 475 279 11 9 474 5 436 1.85e-69 228
Msa0766030 MtrunA17_Chr7g0218811 31.277 470 282 12 9 474 14 446 4.04e-69 227
Msa0766030 MtrunA17_Chr1g0207981 30.382 497 302 15 2 479 3 474 5.68e-69 228
Msa0766030 MtrunA17_Chr7g0218821 31.788 453 264 12 9 446 4 426 9.97e-69 226
Msa0766030 MtrunA17_Chr7g0218841 32.075 477 269 14 9 474 5 437 8.04e-68 224
Msa0766030 MtrunA17_Chr1g0207971 29.897 485 294 12 5 477 3 453 1.25e-67 224
Msa0766030 MtrunA17_Chr1g0207831 32.712 483 279 14 12 477 10 463 3.77e-66 220
Msa0766030 MtrunA17_Chr3g0098111 30.567 494 294 14 5 477 4 469 3.56e-65 218
Msa0766030 MtrunA17_Chr8g0365811 30.677 502 289 18 3 477 488 957 8.29e-65 225
Msa0766030 MtrunA17_Chr8g0365811 30.478 502 292 14 4 477 3 475 8.87e-60 211
Msa0766030 MtrunA17_Chr6g0464881 29.691 485 291 14 9 480 10 457 1.44e-64 216
Msa0766030 MtrunA17_Chr5g0401721 30.453 486 281 18 19 478 17 471 4.48e-64 215
Msa0766030 MtrunA17_Chr7g0218791 28.661 478 289 11 9 474 4 441 2.81e-63 212
Msa0766030 MtrunA17_Chr1g0161351 30.372 484 298 11 10 477 37 497 1.42e-62 211
Msa0766030 MtrunA17_Chr4g0053321 30.505 495 294 17 5 480 19 482 3.66e-62 210
Msa0766030 MtrunA17_Chr5g0431361 29.939 491 290 11 1 477 3 453 5.61e-62 209
Msa0766030 MtrunA17_Chr1g0207861 30.408 490 300 12 5 477 3 468 1.63e-61 208
Msa0766030 MtrunA17_Chr7g0250001 29.730 481 296 13 6 478 2 448 3.17e-61 207
Msa0766030 MtrunA17_Chr1g0207951 29.713 488 290 11 6 477 120 570 1.05e-60 215
Msa0766030 MtrunA17_Chr1g0207951 29.314 481 295 12 12 477 658 1108 2.78e-55 199
Msa0766030 MtrunA17_Chr5g0414331 28.926 484 279 16 10 474 13 450 5.69e-60 204
Msa0766030 MtrunA17_Chr5g0414321 29.607 483 285 17 10 478 11 452 9.57e-60 203
Msa0766030 MtrunA17_Chr5g0431441 29.835 486 287 15 10 478 18 466 4.37e-59 201
Msa0766030 MtrunA17_Chr6g0464871 29.228 479 287 14 10 474 23 463 6.89e-59 201
Msa0766030 MtrunA17_Chr5g0431401 29.485 485 279 12 10 477 10 448 2.33e-58 199
Msa0766030 MtrunA17_Chr7g0249981 30.165 484 286 16 8 478 23 467 2.72e-58 200
Msa0766030 MtrunA17_Chr7g0275681 30.118 508 280 19 9 478 11 481 4.05e-58 199
Msa0766030 MtrunA17_Chr5g0431421 29.218 486 281 12 10 478 10 449 6.74e-57 195
Msa0766030 MtrunA17_Chr7g0265041 29.102 512 289 17 9 478 10 489 8.44e-57 196
Msa0766030 MtrunA17_Chr8g0380531 29.607 483 284 16 10 474 10 454 1.07e-56 195
Msa0766030 MtrunA17_Chr8g0377921 29.659 499 286 17 9 478 2 464 1.98e-56 194
Msa0766030 MtrunA17_Chr6g0464841 29.645 479 285 15 10 474 11 451 2.54e-56 194
Msa0766030 MtrunA17_Chr7g0243771 29.058 499 302 15 6 477 2 475 3.35e-56 194
Msa0766030 MtrunA17_Chr5g0393591 28.992 476 273 12 10 477 17 435 2.22e-55 191
Msa0766030 MtrunA17_Chr6g0464921 28.067 481 303 12 9 479 10 457 3.33e-55 191
Msa0766030 MtrunA17_Chr7g0243631 28.486 502 297 15 10 477 13 486 6.17e-55 191
Msa0766030 MtrunA17_Chr4g0011051 29.116 498 310 15 8 478 7 488 9.44e-55 191
Msa0766030 MtrunA17_Chr7g0243801 28.715 498 303 15 7 477 4 476 9.75e-55 190
Msa0766030 MtrunA17_Chr6g0454381 59.155 142 56 1 131 270 1 142 2.30e-54 179
Msa0766030 MtrunA17_Chr6g0462531 30.159 504 265 18 12 475 6 462 3.86e-54 188
Msa0766030 MtrunA17_Chr6g0464861 29.607 483 292 16 5 474 3 450 6.16e-54 187
Msa0766030 MtrunA17_Chr4g0044511 27.066 484 318 12 10 477 40 504 2.37e-53 187
Msa0766030 MtrunA17_Chr5g0419761 27.767 497 324 14 4 478 3 486 3.25e-53 186
Msa0766030 MtrunA17_Chr6g0462571 29.757 494 273 19 12 473 6 457 4.50e-53 186
Msa0766030 MtrunA17_Chr7g0243931 28.515 505 309 15 2 477 9 490 4.96e-53 186
Msa0766030 MtrunA17_Chr5g0431371 28.866 485 282 13 10 477 10 448 5.83e-53 184
Msa0766030 MtrunA17_Chr3g0121991 30.522 498 285 18 10 477 79 545 1.11e-52 186
Msa0766030 MtrunA17_Chr5g0426411 52.941 170 74 3 6 174 8 172 7.98e-52 173
Msa0766030 MtrunA17_Chr7g0243681 26.969 508 308 15 2 477 3 479 2.76e-51 181
Msa0766030 MtrunA17_Chr3g0122001 28.543 494 300 14 10 477 486 952 6.27e-51 186
Msa0766030 MtrunA17_Chr3g0122001 30.101 495 292 17 10 477 6 473 2.56e-50 184
Msa0766030 MtrunA17_Chr7g0243951 29.240 513 294 19 2 477 3 483 1.45e-50 179
Msa0766030 MtrunA17_Chr8g0373301 29.921 508 282 22 5 481 2 466 1.53e-50 179
Msa0766030 MtrunA17_Chr7g0249931 27.459 488 302 17 5 478 35 484 1.57e-50 179
Msa0766030 MtrunA17_Chr7g0232311 32.597 362 201 9 134 474 121 460 4.29e-50 177
Msa0766030 MtrunA17_Chr8g0347281 27.789 493 279 15 6 466 14 461 1.06e-49 176
Msa0766030 MtrunA17_Chr3g0106231 28.008 482 287 13 10 478 18 452 1.54e-49 176
Msa0766030 MtrunA17_Chr1g0207931 35.938 256 154 3 230 477 244 497 2.17e-49 176
Msa0766030 MtrunA17_Chr6g0449931 28.974 497 283 17 6 470 2 460 2.57e-49 175
Msa0766030 MtrunA17_Chr8g0377941 29.472 492 284 17 12 478 9 462 5.53e-49 174
Msa0766030 MtrunA17_Chr1g0179901 25.528 521 312 14 1 478 7 494 8.37e-49 174
Msa0766030 MtrunA17_Chr6g0462521 31.714 350 192 10 142 475 130 448 1.03e-48 173
Msa0766030 MtrunA17_Chr7g0265101 28.600 507 304 17 8 480 7 489 1.05e-48 174
Msa0766030 MtrunA17_Chr8g0335141 30.754 491 270 19 7 466 6 457 1.06e-48 174
Msa0766030 MtrunA17_Chr5g0419771 26.448 518 292 17 10 478 36 513 1.43e-48 174
Msa0766030 MtrunA17_Chr7g0265051 28.291 509 301 18 8 480 7 487 2.78e-48 173
Msa0766030 MtrunA17_Chr6g0462541 29.395 347 208 7 142 473 135 459 3.60e-48 172
Msa0766030 MtrunA17_Chr8g0336731 32.172 373 215 9 121 474 134 487 3.66e-48 173
Msa0766030 MtrunA17_Chr7g0243861 26.824 507 315 15 2 477 6 487 4.33e-48 172
Msa0766030 MtrunA17_Chr8g0336741 29.412 493 285 14 8 473 11 467 5.26e-48 172
Msa0766030 MtrunA17_Chr7g0265151 28.628 503 298 18 10 478 9 484 1.05e-47 171
Msa0766030 MtrunA17_Chr5g0432731 34.295 312 167 9 185 478 6 297 3.18e-47 165
Msa0766030 MtrunA17_Chr7g0232401 27.105 487 299 13 7 468 3 458 3.57e-47 169
Msa0766030 MtrunA17_Chr8g0336651 28.862 492 293 13 6 473 2 460 4.12e-47 175
Msa0766030 MtrunA17_Chr8g0336651 31.156 398 227 10 107 480 868 1242 4.22e-44 166
Msa0766030 MtrunA17_Chr8g0336651 33.212 274 142 7 215 480 533 773 2.88e-35 140
Msa0766030 MtrunA17_Chr8g0366391 28.049 492 307 15 10 477 9 477 5.49e-47 169
Msa0766030 MtrunA17_Chr8g0347271 27.479 484 292 13 6 466 15 462 8.33e-47 169
Msa0766030 MtrunA17_Chr6g0462551 27.105 487 298 12 12 473 6 460 8.38e-47 169
Msa0766030 MtrunA17_Chr7g0232391 30.541 370 224 9 121 473 108 461 8.74e-47 168
Msa0766030 MtrunA17_Chr5g0440421 28.125 512 316 18 1 478 1 494 9.83e-47 169
Msa0766030 MtrunA17_Chr7g0243781 27.689 502 284 16 15 477 14 475 1.09e-46 169
Msa0766030 MtrunA17_Chr4g0060511 25.819 519 308 15 2 477 3 487 1.53e-46 168
Msa0766030 MtrunA17_Chr8g0336691 27.756 508 298 16 2 480 5 472 2.33e-46 173
Msa0766030 MtrunA17_Chr8g0336691 30.481 374 220 8 121 473 1021 1375 3.26e-44 167
Msa0766030 MtrunA17_Chr8g0336691 29.333 375 205 10 121 480 582 911 1.04e-38 150
Msa0766030 MtrunA17_Chr4g0072761 29.622 476 289 14 10 477 15 452 3.75e-46 166
Msa0766030 MtrunA17_Chr7g0265141 28.889 495 309 13 10 478 9 486 5.82e-46 166
Msa0766030 MtrunA17_Chr8g0339461 32.454 379 196 13 121 466 109 460 2.15e-45 165
Msa0766030 MtrunA17_Chr1g0153451 28.226 496 290 14 6 473 2 459 2.49e-45 164
Msa0766030 MtrunA17_Chr6g0459311 28.800 500 283 20 6 473 9 467 3.18e-44 162
Msa0766030 MtrunA17_Chr8g0339451 32.713 376 207 11 121 470 101 456 4.73e-44 161
Msa0766030 MtrunA17_Chr7g0243871 27.027 518 280 17 7 477 6 472 6.32e-44 161
Msa0766030 MtrunA17_Chr1g0173121 25.800 500 284 15 12 477 16 462 8.02e-44 160
Msa0766030 MtrunA17_Chr8g0382021 26.273 491 293 15 15 477 39 488 9.77e-44 160
Msa0766030 MtrunA17_Chr5g0401851 26.628 522 299 17 1 477 1 483 1.80e-43 160
Msa0766030 MtrunA17_Chr6g0486251 29.032 496 273 21 6 466 2 453 1.94e-43 159
Msa0766030 MtrunA17_Chr6g0486201 29.032 496 273 21 6 466 2 453 1.94e-43 159
Msa0766030 MtrunA17_Chr8g0334851 27.403 489 295 16 6 466 2 458 2.63e-43 159
Msa0766030 MtrunA17_Chr7g0235051 25.692 506 277 12 2 470 3 446 3.54e-43 159
Msa0766030 MtrunA17_Chr8g0339601 37.008 254 126 8 227 456 66 309 3.93e-43 155
Msa0766030 MtrunA17_Chr7g0275511 26.844 488 290 15 9 466 14 464 4.25e-43 159
Msa0766030 MtrunA17_Chr4g0072771 26.994 489 294 14 7 477 22 465 9.65e-43 157
Msa0766030 MtrunA17_Chr8g0339631 29.759 373 219 11 121 470 109 461 2.32e-42 156
Msa0766030 MtrunA17_Chr4g0044501 26.667 495 307 17 10 477 10 475 2.35e-42 157
Msa0766030 MtrunA17_Chr2g0329111 27.866 506 295 21 7 474 3 476 5.13e-42 156
Msa0766030 MtrunA17_Chr8g0335161 33.038 339 190 15 152 466 130 455 6.48e-42 155
Msa0766030 MtrunA17_Chr6g0463891 26.285 506 300 14 11 477 13 484 7.03e-42 155
Msa0766030 MtrunA17_Chr3g0106251 31.561 301 179 8 188 478 11 294 7.36e-42 151
Msa0766030 MtrunA17_Chr1g0159551 24.395 496 287 15 15 477 19 459 1.14e-41 154
Msa0766030 MtrunA17_Chr4g0014061 25.692 506 299 15 6 474 4 469 1.61e-41 154
Msa0766030 MtrunA17_Chr7g0243761 26.240 484 301 14 10 477 11 454 1.68e-41 154
Msa0766030 MtrunA17_Chr7g0232331 28.612 353 219 8 121 456 108 444 2.33e-41 154
Msa0766030 MtrunA17_Chr5g0416741 25.553 497 311 12 12 477 15 483 2.66e-41 154
Msa0766030 MtrunA17_Chr5g0429711 27.600 500 298 18 1 477 3 461 2.98e-41 153
Msa0766030 MtrunA17_Chr1g0165701 26.946 501 299 13 11 477 16 483 4.04e-41 154
Msa0766030 MtrunA17_Chr7g0232411 27.926 376 226 9 121 473 108 461 6.28e-41 152
Msa0766030 MtrunA17_Chr8g0361371 28.125 512 278 22 6 474 3 467 6.97e-41 152
Msa0766030 MtrunA17_Chr7g0232341 27.841 352 223 7 121 456 108 444 1.41e-40 151
Msa0766030 MtrunA17_Chr8g0370941 26.245 522 292 20 7 475 5 486 2.63e-40 151
Msa0766030 MtrunA17_Chr5g0427561 77.011 87 20 0 394 480 1 87 2.85e-40 139
Msa0766030 MtrunA17_Chr5g0448551 25.223 448 293 13 7 445 4 418 3.69e-40 150
Msa0766030 MtrunA17_Chr8g0339441 39.109 202 103 4 285 466 217 418 4.09e-40 149
Msa0766030 MtrunA17_Chr8g0334861 25.845 503 295 15 6 474 2 460 6.77e-40 150
Msa0766030 MtrunA17_Chr1g0153461 39.130 207 109 4 284 473 2 208 7.20e-40 143
Msa0766030 MtrunA17_Chr2g0294931 25.202 496 308 16 15 477 16 481 9.91e-40 150
Msa0766030 MtrunA17_Chr3g0079731 32.099 324 164 10 190 475 173 478 3.10e-39 148
Msa0766030 MtrunA17_Chr4g0066131 26.044 503 298 16 6 474 9 471 4.74e-39 147
Msa0766030 MtrunA17_Chr5g0428081 26.423 492 305 17 15 477 16 479 5.98e-39 147
Msa0766030 MtrunA17_Chr5g0416821 25.051 495 315 14 7 477 11 473 7.05e-39 147
Msa0766030 MtrunA17_Chr7g0243851 31.752 274 166 6 224 477 170 442 1.06e-38 146
Msa0766030 MtrunA17_Chr2g0294921 25.904 498 302 17 15 477 165 630 1.30e-38 148
Msa0766030 MtrunA17_Chr4g0066221 25.198 504 297 19 15 477 16 480 2.98e-38 145
Msa0766030 MtrunA17_Chr5g0442561 24.950 505 313 18 7 478 2 473 3.12e-38 145
Msa0766030 MtrunA17_Chr8g0355221 24.850 499 315 13 11 477 16 486 4.01e-38 145
Msa0766030 MtrunA17_Chr7g0249961 35.319 235 142 5 249 478 31 260 9.11e-38 139
Msa0766030 MtrunA17_Chr5g0403641 32.270 282 152 7 229 481 235 506 1.17e-37 144
Msa0766030 MtrunA17_Chr8g0374931 25.709 494 308 16 15 477 16 481 2.00e-37 143
Msa0766030 MtrunA17_Chr4g0044521 31.715 309 179 11 191 475 164 464 2.46e-37 142
Msa0766030 MtrunA17_Chr4g0066201 25.549 501 290 18 13 477 21 474 2.74e-37 142
Msa0766030 MtrunA17_Chr4g0042891 26.186 485 311 15 10 475 7 463 3.61e-37 142
Msa0766030 MtrunA17_Chr4g0066151 25.146 513 306 18 1 477 9 479 7.32e-37 141
Msa0766030 MtrunA17_Chr7g0265111 25.451 499 321 16 10 478 39 516 1.76e-36 141
Msa0766030 MtrunA17_Chr8g0334831 27.655 499 263 21 6 453 2 453 2.42e-36 140
Msa0766030 MtrunA17_Chr8g0336321 26.809 470 287 14 6 451 3 439 6.93e-36 138
Msa0766030 MtrunA17_Chr6g0463851 24.449 499 309 16 15 477 16 482 1.26e-35 138
Msa0766030 MtrunA17_Chr4g0066281 26.104 498 289 19 13 477 15 466 3.56e-35 137
Msa0766030 MtrunA17_Chr7g0218311 24.494 494 311 16 15 477 21 483 8.45e-35 136
Msa0766030 MtrunA17_Chr8g0336251 26.596 470 288 14 6 451 3 439 9.20e-35 135
Msa0766030 MtrunA17_Chr4g0066261 24.900 502 302 17 15 477 16 481 1.22e-34 135
Msa0766030 MtrunA17_Chr5g0420801 25.410 488 312 18 5 474 2 455 1.28e-34 135
Msa0766030 MtrunA17_Chr7g0241801 27.015 459 266 15 7 454 6 406 1.55e-34 134
Msa0766030 MtrunA17_Chr5g0442541 25.974 385 237 12 122 478 102 466 1.83e-34 134
Msa0766030 MtrunA17_Chr8g0374901 24.502 502 304 17 13 477 15 478 3.10e-34 134
Msa0766030 MtrunA17_Chr5g0431431 34.307 274 149 9 185 450 110 360 3.27e-34 132
Msa0766030 MtrunA17_Chr7g0243711 31.600 250 143 6 250 477 73 316 3.88e-34 130
Msa0766030 MtrunA17_Chr2g0302991 28.297 364 216 10 135 477 123 462 1.37e-33 132
Msa0766030 MtrunA17_Chr4g0042931 26.465 495 295 19 10 475 7 461 1.83e-33 132
Msa0766030 MtrunA17_Chr8g0369341 25.502 498 311 17 5 475 2 466 1.99e-33 132
Msa0766030 MtrunA17_Chr5g0442601 26.854 391 232 15 120 478 508 876 3.32e-33 134
Msa0766030 MtrunA17_Chr5g0442601 32.584 178 100 4 253 418 164 333 6.22e-22 99.8
Msa0766030 MtrunA17_Chr2g0302961 25.000 492 318 13 8 477 3 465 3.91e-33 130
Msa0766030 MtrunA17_Chr5g0442521 23.518 506 314 14 7 474 2 472 4.20e-33 130
Msa0766030 MtrunA17_Chr5g0448521 26.055 403 232 14 114 478 94 468 4.49e-33 130
Msa0766030 MtrunA17_Chr4g0044481 26.761 426 244 13 10 420 27 399 1.36e-32 129
Msa0766030 MtrunA17_Chr8g0374971 24.048 499 312 17 13 477 15 480 2.12e-32 129
Msa0766030 MtrunA17_Chr5g0429681 26.423 492 304 18 6 474 40 496 3.70e-32 128
Msa0766030 MtrunA17_Chr7g0243611 27.000 300 188 7 131 424 3 277 6.52e-32 124
Msa0766030 MtrunA17_Chr8g0361411 24.896 482 316 17 8 477 6 453 7.43e-32 127
Msa0766030 MtrunA17_Chr5g0410941 24.390 492 313 14 15 477 28 489 7.75e-32 127
Msa0766030 MtrunA17_Chr6g0463861 24.291 494 307 17 15 477 16 473 1.05e-31 127
Msa0766030 MtrunA17_Chr2g0307961 26.423 492 320 17 3 479 6 470 3.21e-31 125
Msa0766030 MtrunA17_Chr8g0374941 24.008 504 306 17 13 477 952 1417 3.60e-31 128
Msa0766030 MtrunA17_Chr8g0374941 24.236 491 283 18 13 458 14 460 3.58e-28 119
Msa0766030 MtrunA17_Chr8g0374941 26.568 271 172 6 213 458 657 925 2.30e-27 116
Msa0766030 MtrunA17_Chr5g0442581 29.787 282 158 8 226 478 207 477 4.24e-31 125
Msa0766030 MtrunA17_Chr2g0278721 27.311 476 297 19 1 455 508 955 6.06e-31 127
Msa0766030 MtrunA17_Chr2g0278721 35.838 173 102 5 288 454 274 443 1.01e-21 99.0
Msa0766030 MtrunA17_Chr2g0294941 26.374 364 219 14 124 458 17 360 1.15e-30 122
Msa0766030 MtrunA17_Chr8g0350881 33.180 217 122 4 284 477 264 480 1.40e-30 124
Msa0766030 MtrunA17_Chr4g0066171 25.153 489 302 15 15 477 26 476 2.49e-30 123
Msa0766030 MtrunA17_Chr7g0243811 25.899 417 259 13 22 424 1 381 3.22e-30 121
Msa0766030 MtrunA17_Chr6g0466841 26.782 463 288 17 7 454 15 441 6.85e-30 121
Msa0766030 MtrunA17_Chr7g0243911 35.354 198 110 4 272 452 9 205 1.01e-29 115
Msa0766030 MtrunA17_Chr6g0466831 26.623 462 290 16 7 454 15 441 1.49e-29 120
Msa0766030 MtrunA17_Chr6g0482061 24.558 509 301 15 10 476 11 478 1.50e-29 120
Msa0766030 MtrunA17_Chr5g0442511 29.242 277 154 11 227 474 227 490 2.15e-29 120
Msa0766030 MtrunA17_Chr5g0442491 23.969 509 315 19 7 478 2 475 3.53e-29 119
Msa0766030 MtrunA17_Chr7g0241781 39.429 175 91 5 286 454 241 406 6.23e-29 118
Msa0766030 MtrunA17_Chr5g0427571 31.624 234 149 5 227 451 42 273 2.39e-28 114
Msa0766030 MtrunA17_Chr3g0079711 34.239 184 101 4 312 475 3 186 4.77e-28 110
Msa0766030 MtrunA17_Chr1g0207881 38.760 129 73 1 355 477 256 384 9.18e-27 111
Msa0766030 MtrunA17_Chr1g0207881 25.256 293 174 11 10 298 8 259 1.94e-14 75.1
Msa0766030 MtrunA17_Chr7g0231631 30.252 238 153 5 247 477 28 259 3.86e-26 107
Msa0766030 MtrunA17_Chr3g0092031 34.682 173 104 4 288 454 6 175 4.48e-26 105
Msa0766030 MtrunA17_Chr6g0454391 66.154 65 22 0 370 434 11 75 2.21e-25 100
Msa0766030 MtrunA17_Chr5g0409591 28.458 253 147 8 222 444 205 453 3.32e-25 108
Msa0766030 MtrunA17_Chr8g0367221 25.918 463 302 14 6 453 794 1230 1.34e-24 108
Msa0766030 MtrunA17_Chr8g0367221 25.532 470 294 14 6 453 8 443 2.50e-24 107
Msa0766030 MtrunA17_Chr8g0367221 25.786 477 285 19 6 453 1284 1720 5.34e-23 103
Msa0766030 MtrunA17_Chr7g0232351 31.308 214 114 6 201 395 179 378 1.38e-24 105
Msa0766030 MtrunA17_Chr6g0464091 25.265 471 294 16 6 454 14 448 1.75e-24 105
Msa0766030 MtrunA17_Chr4g0069611 35.838 173 102 5 288 454 269 438 5.22e-24 104
Msa0766030 MtrunA17_Chr8g0337381 41.860 129 65 3 356 480 2 124 8.29e-23 94.0
Msa0766030 MtrunA17_Chr7g0250021 26.426 333 211 12 5 332 7 310 4.87e-22 97.1
Msa0766030 MtrunA17_Chr1g0196851 23.579 475 286 19 10 454 49 476 2.68e-21 96.7
Msa0766030 MtrunA17_Chr3g0118741 62.069 58 22 0 6 63 2 59 6.48e-21 86.7
Msa0766030 MtrunA17_Chr2g0302851 33.708 178 109 5 283 454 265 439 8.99e-21 94.7
Msa0766030 MtrunA17_Chr4g0039881 33.708 178 109 5 283 454 241 415 1.37e-20 94.0
Msa0766030 MtrunA17_Chr2g0278741 34.682 173 104 5 288 454 356 525 9.20e-20 92.4
Msa0766030 MtrunA17_Chr8g0357361 36.879 141 80 3 284 420 116 251 5.45e-19 87.0
Msa0766030 MtrunA17_Chr4g0066141 33.824 136 76 2 356 477 216 351 2.99e-18 86.3
Msa0766030 MtrunA17_Chr4g0029131 27.848 237 142 9 226 447 207 429 1.97e-17 85.1
Msa0766030 MtrunA17_Chr4g0040691 24.364 275 189 6 214 480 197 460 2.28e-17 84.3
Msa0766030 MtrunA17_Chr4g0029151 22.601 469 281 14 10 447 20 437 8.90e-17 82.8
Msa0766030 MtrunA17_Chr2g0319761 23.529 459 306 15 10 454 8 435 8.97e-17 82.4
Msa0766030 MtrunA17_Chr4g0040711 25.200 250 167 9 214 454 197 435 4.85e-16 80.5
Msa0766030 MtrunA17_Chr2g0283041 22.418 455 299 15 10 446 7 425 5.26e-15 77.0
Msa0766030 MtrunA17_Chr2g0319791 23.261 460 304 16 10 453 8 434 1.65e-14 75.5
Msa0766030 MtrunA17_Chr3g0118731 36.283 113 67 2 62 174 28 135 2.78e-13 67.8
Msa0766030 MtrunA17_Chr7g0267931 73.684 38 9 1 14 50 24 61 3.96e-13 64.3
Msa0766030 MtrunA17_Chr2g0319751 23.517 472 288 20 10 453 485 911 5.17e-13 71.6
Msa0766030 MtrunA17_Chr8g0334841 29.452 146 87 3 191 332 1 134 1.64e-12 65.9
Msa0766030 MtrunA17_Chr6g0454241 73.171 41 11 0 437 477 1 41 2.46e-12 62.8
Msa0766030 MtrunA17_Chr7g0243731 35.616 73 47 0 348 420 1 73 2.75e-12 62.4
Msa0766030 MtrunA17_Chr7g0243721 29.545 132 89 3 202 331 6 135 2.19e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766030 AT1G22400.1 52.192 479 218 6 7 479 10 483 7.95e-180 513
Msa0766030 AT1G22340.1 51.458 480 222 6 7 480 10 484 5.32e-177 506
Msa0766030 AT1G22360.1 51.240 484 226 5 1 479 1 479 1.69e-175 501
Msa0766030 AT1G22380.1 50.313 479 228 5 6 479 9 482 7.97e-172 493
Msa0766030 AT1G22370.2 52.510 478 212 6 7 479 10 477 7.97e-169 484
Msa0766030 AT1G22360.2 49.587 484 222 6 1 479 1 467 5.86e-166 477
Msa0766030 AT1G78270.1 48.333 480 236 7 5 478 8 481 3.90e-160 463
Msa0766030 AT1G22370.1 52.824 301 137 3 184 479 7 307 1.62e-103 311
Msa0766030 AT5G59590.1 35.802 486 266 13 1 477 1 449 6.17e-91 284
Msa0766030 AT5G59580.1 35.537 484 261 14 8 481 7 449 4.96e-86 272
Msa0766030 AT3G11340.1 33.608 485 266 15 6 478 5 445 7.93e-84 266
Msa0766030 AT5G05880.1 33.121 471 276 10 10 474 8 445 8.47e-83 263
Msa0766030 AT3G46670.1 34.728 478 269 12 6 474 2 445 3.02e-82 262
Msa0766030 AT3G46660.1 34.656 479 270 13 6 474 7 452 5.58e-81 259
Msa0766030 AT5G05900.1 32.979 470 277 10 10 474 8 444 1.12e-80 258
Msa0766030 AT5G05890.1 33.546 471 278 9 10 474 8 449 4.39e-80 256
Msa0766030 AT5G05860.1 31.924 473 287 7 10 479 9 449 8.79e-80 255
Msa0766030 AT5G38010.1 33.747 483 284 10 1 477 1 453 7.97e-79 253
Msa0766030 AT5G38040.1 32.979 470 265 13 19 477 19 449 9.43e-78 250
Msa0766030 AT3G46680.1 33.745 486 261 13 6 474 5 446 2.95e-77 249
Msa0766030 AT5G05870.1 33.124 477 280 11 10 477 8 454 6.30e-76 246
Msa0766030 AT3G46690.1 33.888 481 278 12 1 475 1 447 7.92e-75 243
Msa0766030 AT2G36970.1 31.325 498 293 13 1 477 1 470 7.25e-74 241
Msa0766030 AT3G46700.1 32.017 481 282 12 1 475 1 442 1.02e-72 237
Msa0766030 AT3G46650.1 31.799 478 269 11 1 472 1 427 5.98e-72 234
Msa0766030 AT3G46720.1 33.888 481 267 14 1 474 1 437 6.78e-72 235
Msa0766030 AT3G55700.1 32.988 482 278 14 7 478 5 451 3.28e-71 233
Msa0766030 AT4G15490.1 31.463 499 283 16 7 480 5 469 9.11e-66 219
Msa0766030 AT3G21560.1 30.346 491 287 15 9 475 11 470 7.07e-65 218
Msa0766030 AT2G26480.1 29.857 489 285 15 7 481 5 449 2.26e-64 215
Msa0766030 AT2G28080.1 30.126 478 298 12 15 481 23 475 3.38e-64 216
Msa0766030 AT3G55710.1 32.179 491 274 19 7 478 5 455 5.34e-64 214
Msa0766030 AT4G15500.1 29.615 493 287 16 9 478 8 463 1.82e-63 213
Msa0766030 AT2G31790.1 31.393 481 285 15 7 474 5 453 6.95e-63 211
Msa0766030 AT4G15480.1 30.328 488 288 16 10 475 19 476 1.47e-61 209
Msa0766030 AT4G01070.1 31.440 493 278 12 7 473 5 463 1.63e-60 206
Msa0766030 AT3G02100.1 29.436 479 293 15 8 474 11 456 2.77e-60 205
Msa0766030 AT1G05680.1 30.105 475 291 15 10 474 6 449 6.25e-60 204
Msa0766030 AT1G05675.1 30.189 477 288 13 10 474 6 449 2.95e-59 202
Msa0766030 AT4G34131.1 27.490 502 314 13 1 476 1 478 4.13e-57 197
Msa0766030 AT2G23250.1 31.478 467 274 15 19 477 7 435 6.91e-57 195
Msa0766030 AT2G23260.1 29.448 489 301 13 1 479 1 455 7.96e-57 195
Msa0766030 AT2G30140.1 30.417 480 281 14 10 477 13 451 1.81e-56 194
Msa0766030 AT2G43820.1 28.803 493 285 17 7 480 4 449 4.54e-56 193
Msa0766030 AT2G30140.2 30.208 480 281 14 10 477 13 450 5.87e-56 193
Msa0766030 AT2G36800.1 30.321 498 297 14 10 478 12 488 1.69e-55 193
Msa0766030 AT2G31750.1 27.812 489 300 15 6 478 4 455 1.99e-55 192
Msa0766030 AT2G31750.2 27.686 484 307 16 6 478 4 455 5.47e-55 191
Msa0766030 AT2G30150.2 29.228 479 289 13 10 477 13 452 7.24e-55 190
Msa0766030 AT3G53160.1 29.779 497 300 17 10 478 8 483 1.76e-54 190
Msa0766030 AT5G66690.1 28.291 509 278 16 8 476 5 466 5.51e-54 188
Msa0766030 AT2G36790.1 31.412 503 284 18 10 478 13 488 9.41e-54 188
Msa0766030 AT2G30150.1 29.114 474 286 13 15 477 2 436 1.90e-53 186
Msa0766030 AT2G36760.1 28.431 510 296 17 10 481 14 492 2.81e-53 187
Msa0766030 AT2G43840.2 28.484 488 291 16 8 480 5 449 3.26e-53 186
Msa0766030 AT2G36770.1 26.931 505 310 16 10 481 14 492 4.66e-53 186
Msa0766030 AT2G43840.1 28.484 488 291 16 8 480 5 449 5.09e-53 185
Msa0766030 AT2G36780.1 29.216 510 286 20 10 478 14 489 2.53e-52 184
Msa0766030 AT1G05560.1 27.254 488 296 14 9 477 4 451 2.73e-52 184
Msa0766030 AT1G05560.2 27.254 488 296 14 9 477 54 501 4.88e-52 184
Msa0766030 AT2G15480.1 27.146 501 320 14 1 477 1 480 7.79e-52 183
Msa0766030 AT5G26310.1 27.308 509 283 15 8 476 5 466 3.11e-51 181
Msa0766030 AT2G15480.2 26.810 511 319 15 1 477 1 490 2.55e-50 179
Msa0766030 AT2G15490.3 27.459 488 317 14 10 477 7 477 1.47e-49 176
Msa0766030 AT4G15550.1 26.946 501 293 14 9 476 12 472 2.48e-49 176
Msa0766030 AT1G30530.1 28.992 476 297 11 11 481 14 453 8.66e-49 174
Msa0766030 AT2G15490.1 27.291 491 317 15 10 477 7 480 9.51e-49 174
Msa0766030 AT3G53150.1 26.863 510 323 14 7 481 19 513 2.00e-48 174
Msa0766030 AT4G14090.1 29.039 489 288 18 5 476 8 454 3.36e-48 172
Msa0766030 AT1G10400.1 29.713 488 295 18 7 476 4 461 3.81e-48 172
Msa0766030 AT2G36750.1 28.112 498 306 15 10 478 10 484 4.73e-48 172
Msa0766030 AT3G16520.3 30.707 368 220 12 122 476 113 458 5.45e-47 169
Msa0766030 AT1G01420.1 29.150 494 283 16 9 473 7 462 6.68e-47 169
Msa0766030 AT4G34135.1 27.309 498 319 13 2 476 3 480 7.45e-47 169
Msa0766030 AT1G01420.2 29.150 494 283 16 9 473 10 465 7.51e-47 169
Msa0766030 AT1G05530.1 25.904 498 297 16 8 478 3 455 8.19e-47 169
Msa0766030 AT4G34138.1 27.485 513 290 18 8 479 9 480 1.50e-46 169
Msa0766030 AT5G37950.1 30.709 381 216 12 25 395 1 343 5.41e-46 164
Msa0766030 AT1G01390.1 30.488 492 290 15 9 480 7 466 6.38e-46 167
Msa0766030 AT1G01390.2 30.488 492 290 15 9 480 24 483 7.63e-46 167
Msa0766030 AT1G24100.1 27.400 500 283 15 8 477 9 458 8.83e-46 166
Msa0766030 AT3G16520.2 31.232 349 205 12 122 457 113 439 8.98e-46 166
Msa0766030 AT3G16520.1 31.250 352 201 12 122 457 113 439 1.19e-45 165
Msa0766030 AT2G16890.2 28.743 501 282 19 10 477 9 467 2.29e-45 165
Msa0766030 AT5G17050.1 27.615 478 311 11 7 478 9 457 8.00e-45 163
Msa0766030 AT5G14860.1 29.051 506 283 17 10 477 8 475 8.96e-45 164
Msa0766030 AT5G03490.1 29.424 486 287 19 7 476 16 461 1.16e-44 163
Msa0766030 AT3G50740.1 27.075 506 288 16 8 473 5 469 1.44e-44 163
Msa0766030 AT5G17040.2 30.421 309 201 4 173 478 41 338 6.30e-44 158
Msa0766030 AT5G37950.2 30.000 380 214 11 25 395 1 337 9.56e-44 157
Msa0766030 AT5G17040.1 29.444 360 226 6 122 478 106 440 6.41e-42 155
Msa0766030 AT5G17030.1 31.208 298 191 5 184 478 170 456 6.35e-41 152
Msa0766030 AT4G15260.1 29.111 371 214 11 135 478 7 355 4.79e-40 148
Msa0766030 AT2G18560.1 31.778 343 191 10 155 470 43 369 5.33e-40 148
Msa0766030 AT3G21760.1 26.295 502 307 14 12 477 6 480 1.57e-39 149
Msa0766030 AT3G21800.1 27.345 501 297 16 12 477 7 475 2.97e-39 148
Msa0766030 AT2G18570.1 27.108 498 287 19 8 470 3 459 4.32e-39 148
Msa0766030 AT3G22250.1 24.947 473 288 12 7 449 5 440 4.81e-39 147
Msa0766030 AT4G15280.1 27.612 402 242 10 109 481 96 477 2.78e-38 145
Msa0766030 AT4G15280.2 27.612 402 242 10 109 481 128 509 4.45e-38 145
Msa0766030 AT2G29710.1 25.051 491 320 17 7 478 2 463 1.43e-37 144
Msa0766030 AT4G36770.1 27.778 486 269 19 10 458 4 444 4.90e-37 142
Msa0766030 AT3G21780.1 29.545 396 235 11 107 477 92 468 5.20e-37 142
Msa0766030 AT2G29740.1 25.355 493 319 13 6 474 4 471 1.28e-36 141
Msa0766030 AT3G21790.1 28.030 396 238 8 110 477 102 478 5.05e-36 140
Msa0766030 AT3G21750.1 28.535 396 227 10 112 478 101 469 9.13e-36 139
Msa0766030 AT1G51210.1 26.096 456 285 16 8 452 18 432 3.93e-35 136
Msa0766030 AT2G29730.1 29.545 264 164 6 226 478 211 463 5.02e-35 136
Msa0766030 AT2G16890.3 27.434 452 254 18 10 429 9 418 6.63e-35 135
Msa0766030 AT1G07260.1 26.810 373 237 11 122 478 120 472 1.08e-34 135
Msa0766030 AT1G73880.1 27.959 490 300 19 8 478 12 467 1.42e-34 135
Msa0766030 AT2G29750.1 24.744 489 322 14 12 478 10 474 3.34e-33 131
Msa0766030 AT1G07250.1 27.824 363 217 13 136 478 136 473 1.34e-32 130
Msa0766030 AT5G12890.1 28.324 519 293 26 5 480 2 484 4.82e-32 128
Msa0766030 AT5G65550.1 26.915 483 291 14 5 462 2 447 3.13e-31 125
Msa0766030 AT1G07240.1 27.839 273 172 6 222 478 213 476 2.67e-29 120
Msa0766030 AT5G49690.1 25.000 472 294 15 1 453 1 431 9.04e-29 119
Msa0766030 AT2G22590.1 26.569 478 275 14 8 453 13 446 3.02e-27 114
Msa0766030 AT1G06000.1 25.498 502 284 19 1 479 1 435 1.82e-26 111
Msa0766030 AT4G01070.2 28.653 349 204 10 7 345 5 318 3.69e-26 109
Msa0766030 AT4G34135.2 26.531 343 221 10 2 332 3 326 5.71e-24 102
Msa0766030 AT2G22930.1 24.795 488 291 19 10 477 6 437 3.37e-18 87.4
Msa0766030 AT4G27570.1 24.476 429 271 17 8 428 5 388 1.05e-17 85.9
Msa0766030 AT3G29630.2 32.544 169 104 4 288 452 220 382 1.57e-17 85.1
Msa0766030 AT3G29630.1 32.544 169 104 4 288 452 246 408 1.61e-17 85.1
Msa0766030 AT5G53990.1 24.242 429 263 14 10 428 6 382 2.43e-17 84.7
Msa0766030 AT4G09500.2 30.337 178 112 5 287 454 243 418 3.02e-17 84.3
Msa0766030 AT4G09500.1 30.508 177 111 5 288 454 219 393 3.06e-17 84.3
Msa0766030 AT4G27560.1 23.953 430 272 16 8 428 5 388 3.69e-17 84.3
Msa0766030 AT1G64910.1 30.688 189 115 6 288 464 244 428 6.21e-17 83.6
Msa0766030 AT5G54010.1 27.230 213 128 7 287 480 249 453 8.99e-16 79.7
Msa0766030 AT1G50580.1 30.625 160 97 4 267 421 230 380 3.18e-15 78.2
Msa0766030 AT1G64920.1 27.979 193 119 5 288 464 244 432 2.69e-14 75.5
Msa0766030 AT5G54060.1 24.017 458 295 16 12 448 15 440 4.67e-13 71.6
Msa0766030 AT2G23210.1 24.585 301 191 11 1 297 1 269 2.77e-12 67.8

Find 106 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATAAACAACAGATTT+TGG 0.170772 5_2:-27422642 None:intergenic
GTTGATTTATGAGCTAAATT+TGG 0.192569 5_2:-27423404 None:intergenic
ATTAGGCCTGATCTTGTTAT+TGG 0.251913 5_2:+27422753 Msa0766030:CDS
GTTTCAACATTGGATTGATA+TGG 0.270676 5_2:-27421731 None:intergenic
TCTGTTGTTTATGTAAATTT+TGG 0.280760 5_2:+27422648 Msa0766030:CDS
CATCTTTAGACTCTAATCTT+TGG 0.281547 5_2:+27422577 Msa0766030:CDS
CCAATGTTAATTGGACAAAT+TGG 0.281780 5_2:+27423457 Msa0766030:three_prime_UTR
TCAGCAGCATCTACTGTAAA+TGG 0.295141 5_2:-27422065 None:intergenic
CGCAAATAATTCTACTAGTA+AGG 0.305492 5_2:-27422974 None:intergenic
GCTAAAGTTGACGCGATTCC+AGG 0.305944 5_2:+27422318 Msa0766030:CDS
TTATCTAACAGATGGATATT+TGG 0.307095 5_2:+27422293 Msa0766030:CDS
AGAGCATCGCCAATGTTAAT+TGG 0.307701 5_2:+27423448 Msa0766030:three_prime_UTR
GAACTTGGACAAAGTGATTA+AGG 0.324980 5_2:+27423166 Msa0766030:CDS
AGGTTATTTGAAAGCCTCTA+AGG 0.339199 5_2:-27421770 None:intergenic
GTGGACACCAACTTGCTATT+AGG 0.356812 5_2:-27422827 None:intergenic
TCAGAAACTAAACAAGTAAC+TGG 0.360551 5_2:-27422032 None:intergenic
GTTAAACCATCAAAGGCATT+TGG 0.361890 5_2:-27421840 None:intergenic
AGAGGTCCAAATGCCTTTGA+TGG 0.361997 5_2:+27421834 Msa0766030:CDS
ATTTGCGAAGAATGGGAGAT+TGG 0.369050 5_2:+27422990 Msa0766030:CDS
GGAAAACTACTTCACCTTAG+AGG 0.373038 5_2:+27421756 Msa0766030:CDS
GTTAGAGTTTGCTTGGGGTT+TGG 0.373087 5_2:+27422701 Msa0766030:CDS
TTGAAAGAAATTTCAGATAG+AGG 0.375107 5_2:+27422804 Msa0766030:CDS
GTAGAATTATTTGCGAAGAA+TGG 0.386384 5_2:+27422982 Msa0766030:CDS
CATGGGGAAAAGAGAACAAT+TGG 0.394298 5_2:-27422101 None:intergenic
TGATTTACAAAAGAAGCTAA+TGG 0.400081 5_2:-27422534 None:intergenic
TTAACTCCATTTCCAGTTCA+AGG 0.403092 5_2:+27421708 Msa0766030:CDS
ATTTATACTCACTTTAACAT+TGG 0.407911 5_2:+27421631 Msa0766030:five_prime_UTR
ATTTCTAAATTGTTTAAGAA+TGG 0.409131 5_2:+27422155 Msa0766030:CDS
GAAATTGTTAGAGTTTGCTT+GGG 0.411975 5_2:+27422695 Msa0766030:CDS
TAGAATTATTTGCGAAGAAT+GGG 0.416190 5_2:+27422983 Msa0766030:CDS
AGAAATTGTTAGAGTTTGCT+TGG 0.416951 5_2:+27422694 Msa0766030:CDS
ATATGGCCTTGAACTGGAAA+TGG 0.427004 5_2:-27421714 None:intergenic
TTTGCGAAGAATGGGAGATT+GGG 0.429782 5_2:+27422991 Msa0766030:CDS
AGGCCTGATCTTGTTATTGG+TGG 0.439995 5_2:+27422756 Msa0766030:CDS
TTACTATGCATTGTTTCAAA+AGG 0.446021 5_2:+27423311 Msa0766030:three_prime_UTR
GCAAATAATTCTACTAGTAA+GGG 0.450645 5_2:-27422973 None:intergenic
TTATGAGCTAAATTTGGAAC+CGG 0.454482 5_2:-27423398 None:intergenic
ATTAACATTGGCGATGCTCT+TGG 0.458889 5_2:-27423445 None:intergenic
TCCGTCGGAGTTAAACCATC+TGG 0.461575 5_2:-27421885 None:intergenic
GAAACTGATTAATGAATTGA+TGG 0.464761 5_2:+27423052 Msa0766030:CDS
AGGAAAGAAGATGAGGCAAA+AGG 0.473475 5_2:+27423085 Msa0766030:CDS
GGATTGATATGGCCTTGAAC+TGG 0.473999 5_2:-27421720 None:intergenic
GAGCCACCAATAACAAGATC+AGG 0.474390 5_2:-27422759 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.480370 5_2:+27423065 Msa0766030:CDS
TGGATTTATAAAGCTTCCTA+TGG 0.493464 5_2:-27423375 None:intergenic
TTATTCTTGCTAAAACAGAA+TGG 0.511557 5_2:-27423486 None:intergenic
GTCAAGAATCCACTGATTGA+AGG 0.512055 5_2:-27422870 None:intergenic
TACCTCCTCTCTCTTTACAT+TGG 0.514594 5_2:-27423027 None:intergenic
CCAATTTGTCCAATTAACAT+TGG 0.523246 5_2:-27423457 None:intergenic
TGATTCAAAACTTTCTCTTG+TGG 0.524173 5_2:-27422846 None:intergenic
CTTCATGACTCTGCCACTGC+TGG 0.525593 5_2:+27421999 Msa0766030:CDS
TAGAAGTAACATGCACTACA+TGG 0.529399 5_2:-27422119 None:intergenic
TTTCCATCTCTATACACCAT+TGG 0.531180 5_2:+27422510 Msa0766030:CDS
GGACCAATGGTGTATAGAGA+TGG 0.531896 5_2:-27422513 None:intergenic
TTGAATCACCCTTCAATCAG+TGG 0.539393 5_2:+27422861 Msa0766030:CDS
AAAATCAGTTAAACCATCAA+AGG 0.541491 5_2:-27421847 None:intergenic
GATGAGAGTTATCTAACAGA+TGG 0.542679 5_2:+27422285 Msa0766030:intron
TCCAGATGGTTTAACTCCGA+CGG 0.549751 5_2:+27421884 Msa0766030:CDS
GATTCTTGACTCATTGCGGA+TGG 0.559614 5_2:+27422883 Msa0766030:CDS
ACCATCTGGAATAGTCTCAA+AGG 0.560749 5_2:-27421871 None:intergenic
CAAGAAATTCACCAAAGAAG+TGG 0.561791 5_2:-27421971 None:intergenic
AGGAAGCTTTATAAATCCAC+CGG 0.567391 5_2:+27423379 Msa0766030:three_prime_UTR
TCCAGCACATACACTTTCAG+TGG 0.572002 5_2:-27422913 None:intergenic
TGAGCTAAATTTGGAACCGG+TGG 0.572469 5_2:-27423395 None:intergenic
TAATTCTACTAGTAAGGGGT+TGG 0.572752 5_2:-27422968 None:intergenic
ACCACTGAAAGTGTATGTGC+TGG 0.576184 5_2:+27422912 Msa0766030:CDS
TCAAGAATCCACTGATTGAA+GGG 0.577157 5_2:-27422869 None:intergenic
AGGATATTCCTGATATAATG+AGG 0.577513 5_2:+27422361 Msa0766030:CDS
AGTATTGAAAACAATGGCTG+AGG 0.577645 5_2:-27422442 None:intergenic
ACCTTTGAGACTATTCCAGA+TGG 0.577669 5_2:+27421870 Msa0766030:CDS
CAAATAATTCTACTAGTAAG+GGG 0.578183 5_2:-27422972 None:intergenic
CTGGAGTGCCAATGTTGCGT+TGG 0.581182 5_2:+27422931 Msa0766030:CDS
TTAACTCCGACGGATGGTGA+TGG 0.581677 5_2:+27421894 Msa0766030:CDS
TGGTAGTTCATACATGAACT+TGG 0.582019 5_2:+27423151 Msa0766030:CDS
ATCAATCCAATGTTGAAACT+AGG 0.583883 5_2:+27421735 Msa0766030:CDS
GGCCACGGAGTTGAAGAAGA+AGG 0.584340 5_2:+27423106 Msa0766030:CDS
ACTGATTAATGAATTGATGG+TGG 0.584937 5_2:+27423055 Msa0766030:CDS
GAGAGAAAGGAAAGAAGATG+AGG 0.584946 5_2:+27423078 Msa0766030:CDS
AGAAGTAACATGCACTACAT+GGG 0.584959 5_2:-27422118 None:intergenic
GGAGTTGAAGAAGAAGGCAG+AGG 0.585984 5_2:+27423112 Msa0766030:CDS
TGCCTTCTTCTTCAACTCCG+TGG 0.587057 5_2:-27423108 None:intergenic
AAAAGAAGCTAATGGACCAA+TGG 0.589223 5_2:-27422526 None:intergenic
GAAGATGAGGCAAAAGGCCA+CGG 0.589843 5_2:+27423091 Msa0766030:CDS
ATTGTATTCAGTGTTAACAA+AGG 0.597303 5_2:-27421790 None:intergenic
CTGATTAATGAATTGATGGT+GGG 0.598725 5_2:+27423056 Msa0766030:CDS
AATGGTGTGCTACCACTCAA+AGG 0.604381 5_2:+27422173 Msa0766030:CDS
ATTAGAAGTATTGAAAACAA+TGG 0.609028 5_2:-27422448 None:intergenic
AAACGATTGCTCAAATCAAG+AGG 0.613843 5_2:+27421816 Msa0766030:CDS
GAAACTAAACAAGTAACTGG+AGG 0.618347 5_2:-27422029 None:intergenic
ACATAATGATTACCTTTGAG+TGG 0.621915 5_2:-27422185 None:intergenic
TCTTGTTATTGGTGGCTCAG+AGG 0.628258 5_2:+27422764 Msa0766030:CDS
TGATACCAATGTAAAGAGAG+AGG 0.628645 5_2:+27423022 Msa0766030:CDS
TGGAGGGATAAGACCAGCAG+TGG 0.631182 5_2:-27422012 None:intergenic
AGTGGATTCTTGACTCATTG+CGG 0.631844 5_2:+27422879 Msa0766030:CDS
AAATTGTTAGAGTTTGCTTG+GGG 0.637062 5_2:+27422696 Msa0766030:CDS
AAACTAAACAAGTAACTGGA+GGG 0.637432 5_2:-27422028 None:intergenic
GATGGTTTAACTCCGACGGA+TGG 0.637961 5_2:+27421888 Msa0766030:CDS
GAAGTAACATGCACTACATG+GGG 0.639344 5_2:-27422117 None:intergenic
AAGATACTAAATGTCTCGAG+TGG 0.646859 5_2:+27422604 Msa0766030:CDS
ATAGAGGCCTAATAGCAAGT+TGG 0.652566 5_2:+27422820 Msa0766030:CDS
ACATCTCCATCACCATCCGT+CGG 0.665024 5_2:-27421900 None:intergenic
AATGGAGTTAACACTGCATG+TGG 0.683935 5_2:-27421696 None:intergenic
TACCAATGTAAAGAGAGAGG+AGG 0.690671 5_2:+27423025 Msa0766030:CDS
GCAGAGGAAGACACAAGACT+CGG 0.694840 5_2:+27423128 Msa0766030:CDS
GAGGAAGACACAAGACTCGG+TGG 0.714652 5_2:+27423131 Msa0766030:CDS
GAAAACAGAAGAGCTTCACA+TGG 0.725768 5_2:-27423342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGCTTTATTAAAAAGAAA+AGG - chr5_2:27421610-27421629 None:intergenic 15.0%
!! ATTTCTAAATTGTTTAAGAA+TGG + chr5_2:27422155-27422174 Msa0766030:CDS 15.0%
!!! CTTTTATATTTTATCAAATC+AGG - chr5_2:27422396-27422415 None:intergenic 15.0%
!!! TTTGCTTTATTAAAAAGAAA+AGG - chr5_2:27421610-27421629 None:intergenic 15.0%
!! ATTTCTAAATTGTTTAAGAA+TGG + chr5_2:27422155-27422174 Msa0766030:CDS 15.0%
!!! CTTTTATATTTTATCAAATC+AGG - chr5_2:27422396-27422415 None:intergenic 15.0%
!! ATTTATACTCACTTTAACAT+TGG + chr5_2:27421631-27421650 Msa0766030:five_prime_UTR 20.0%
!!! TTTGAAAAACATTAGTTTGA+AGG + chr5_2:27422341-27422360 Msa0766030:CDS 20.0%
!!! ATTAGAAGTATTGAAAACAA+TGG - chr5_2:27422451-27422470 None:intergenic 20.0%
!!! TTTACATAAACAACAGATTT+TGG - chr5_2:27422645-27422664 None:intergenic 20.0%
!!! TCTGTTGTTTATGTAAATTT+TGG + chr5_2:27422648-27422667 Msa0766030:CDS 20.0%
!! ATTTATACTCACTTTAACAT+TGG + chr5_2:27421631-27421650 Msa0766030:five_prime_UTR 20.0%
!!! TTTGAAAAACATTAGTTTGA+AGG + chr5_2:27422341-27422360 Msa0766030:CDS 20.0%
!!! ATTAGAAGTATTGAAAACAA+TGG - chr5_2:27422451-27422470 None:intergenic 20.0%
!!! TTTACATAAACAACAGATTT+TGG - chr5_2:27422645-27422664 None:intergenic 20.0%
!!! TCTGTTGTTTATGTAAATTT+TGG + chr5_2:27422648-27422667 Msa0766030:CDS 20.0%
! ATTGTATTCAGTGTTAACAA+AGG - chr5_2:27421793-27421812 None:intergenic 25.0%
! AAAATCAGTTAAACCATCAA+AGG - chr5_2:27421850-27421869 None:intergenic 25.0%
! TTATCTAACAGATGGATATT+TGG + chr5_2:27422293-27422312 Msa0766030:CDS 25.0%
!!! AAACTAATGTTTTTCAAACC+TGG - chr5_2:27422339-27422358 None:intergenic 25.0%
!! TCTTTTATCCTCATTATATC+AGG - chr5_2:27422372-27422391 None:intergenic 25.0%
! TGATTTACAAAAGAAGCTAA+TGG - chr5_2:27422537-27422556 None:intergenic 25.0%
!!! AACCTTTTTTGTGGATTATT+AGG + chr5_2:27422736-27422755 Msa0766030:CDS 25.0%
! TTGAAAGAAATTTCAGATAG+AGG + chr5_2:27422804-27422823 Msa0766030:CDS 25.0%
! CAAATAATTCTACTAGTAAG+GGG - chr5_2:27422975-27422994 None:intergenic 25.0%
! GCAAATAATTCTACTAGTAA+GGG - chr5_2:27422976-27422995 None:intergenic 25.0%
! TAGAATTATTTGCGAAGAAT+GGG + chr5_2:27422983-27423002 Msa0766030:CDS 25.0%
! GAAACTGATTAATGAATTGA+TGG + chr5_2:27423052-27423071 Msa0766030:CDS 25.0%
! TTACTATGCATTGTTTCAAA+AGG + chr5_2:27423311-27423330 Msa0766030:three_prime_UTR 25.0%
!! GTTGATTTATGAGCTAAATT+TGG - chr5_2:27423407-27423426 None:intergenic 25.0%
! TTATTCTTGCTAAAACAGAA+TGG - chr5_2:27423489-27423508 None:intergenic 25.0%
! ATTGTATTCAGTGTTAACAA+AGG - chr5_2:27421793-27421812 None:intergenic 25.0%
! AAAATCAGTTAAACCATCAA+AGG - chr5_2:27421850-27421869 None:intergenic 25.0%
! TTATCTAACAGATGGATATT+TGG + chr5_2:27422293-27422312 Msa0766030:CDS 25.0%
!!! AAACTAATGTTTTTCAAACC+TGG - chr5_2:27422339-27422358 None:intergenic 25.0%
!! TCTTTTATCCTCATTATATC+AGG - chr5_2:27422372-27422391 None:intergenic 25.0%
! TGATTTACAAAAGAAGCTAA+TGG - chr5_2:27422537-27422556 None:intergenic 25.0%
!!! AACCTTTTTTGTGGATTATT+AGG + chr5_2:27422736-27422755 Msa0766030:CDS 25.0%
! TTGAAAGAAATTTCAGATAG+AGG + chr5_2:27422804-27422823 Msa0766030:CDS 25.0%
! CAAATAATTCTACTAGTAAG+GGG - chr5_2:27422975-27422994 None:intergenic 25.0%
! GCAAATAATTCTACTAGTAA+GGG - chr5_2:27422976-27422995 None:intergenic 25.0%
! TAGAATTATTTGCGAAGAAT+GGG + chr5_2:27422983-27423002 Msa0766030:CDS 25.0%
! GAAACTGATTAATGAATTGA+TGG + chr5_2:27423052-27423071 Msa0766030:CDS 25.0%
! TTACTATGCATTGTTTCAAA+AGG + chr5_2:27423311-27423330 Msa0766030:three_prime_UTR 25.0%
!! GTTGATTTATGAGCTAAATT+TGG - chr5_2:27423407-27423426 None:intergenic 25.0%
! TTATTCTTGCTAAAACAGAA+TGG - chr5_2:27423489-27423508 None:intergenic 25.0%
GTTTCAACATTGGATTGATA+TGG - chr5_2:27421734-27421753 None:intergenic 30.0%
ATCAATCCAATGTTGAAACT+AGG + chr5_2:27421735-27421754 Msa0766030:CDS 30.0%
! AGTTTTCCTAGTTTCAACAT+TGG - chr5_2:27421744-27421763 None:intergenic 30.0%
! AAGAATTTTCACCACTTCTT+TGG + chr5_2:27421960-27421979 Msa0766030:CDS 30.0%
AAACTAAACAAGTAACTGGA+GGG - chr5_2:27422031-27422050 None:intergenic 30.0%
TCAGAAACTAAACAAGTAAC+TGG - chr5_2:27422035-27422054 None:intergenic 30.0%
ACATAATGATTACCTTTGAG+TGG - chr5_2:27422188-27422207 None:intergenic 30.0%
! TATGTTCCCTTTTTCTTCAT+AGG + chr5_2:27422203-27422222 Msa0766030:intron 30.0%
AGGATATTCCTGATATAATG+AGG + chr5_2:27422361-27422380 Msa0766030:CDS 30.0%
! AAAGATGTCAAGTGATTTTG+TGG - chr5_2:27422564-27422583 None:intergenic 30.0%
CATCTTTAGACTCTAATCTT+TGG + chr5_2:27422577-27422596 Msa0766030:CDS 30.0%
! AGAAATTGTTAGAGTTTGCT+TGG + chr5_2:27422694-27422713 Msa0766030:CDS 30.0%
! GAAATTGTTAGAGTTTGCTT+GGG + chr5_2:27422695-27422714 Msa0766030:CDS 30.0%
! AAATTGTTAGAGTTTGCTTG+GGG + chr5_2:27422696-27422715 Msa0766030:CDS 30.0%
TGATTCAAAACTTTCTCTTG+TGG - chr5_2:27422849-27422868 None:intergenic 30.0%
CGCAAATAATTCTACTAGTA+AGG - chr5_2:27422977-27422996 None:intergenic 30.0%
GTAGAATTATTTGCGAAGAA+TGG + chr5_2:27422982-27423001 Msa0766030:CDS 30.0%
ACTGATTAATGAATTGATGG+TGG + chr5_2:27423055-27423074 Msa0766030:CDS 30.0%
! CTGATTAATGAATTGATGGT+GGG + chr5_2:27423056-27423075 Msa0766030:CDS 30.0%
! GTTTTCTGTAATAACACCAT+AGG + chr5_2:27423359-27423378 Msa0766030:three_prime_UTR 30.0%
TGGATTTATAAAGCTTCCTA+TGG - chr5_2:27423378-27423397 None:intergenic 30.0%
! TTATGAGCTAAATTTGGAAC+CGG - chr5_2:27423401-27423420 None:intergenic 30.0%
CCAATTTGTCCAATTAACAT+TGG - chr5_2:27423460-27423479 None:intergenic 30.0%
CCAATGTTAATTGGACAAAT+TGG + chr5_2:27423457-27423476 Msa0766030:three_prime_UTR 30.0%
GTTTCAACATTGGATTGATA+TGG - chr5_2:27421734-27421753 None:intergenic 30.0%
ATCAATCCAATGTTGAAACT+AGG + chr5_2:27421735-27421754 Msa0766030:CDS 30.0%
! AGTTTTCCTAGTTTCAACAT+TGG - chr5_2:27421744-27421763 None:intergenic 30.0%
! AAGAATTTTCACCACTTCTT+TGG + chr5_2:27421960-27421979 Msa0766030:CDS 30.0%
AAACTAAACAAGTAACTGGA+GGG - chr5_2:27422031-27422050 None:intergenic 30.0%
TCAGAAACTAAACAAGTAAC+TGG - chr5_2:27422035-27422054 None:intergenic 30.0%
ACATAATGATTACCTTTGAG+TGG - chr5_2:27422188-27422207 None:intergenic 30.0%
! TATGTTCCCTTTTTCTTCAT+AGG + chr5_2:27422203-27422222 Msa0766030:intron 30.0%
AGGATATTCCTGATATAATG+AGG + chr5_2:27422361-27422380 Msa0766030:CDS 30.0%
! AAAGATGTCAAGTGATTTTG+TGG - chr5_2:27422564-27422583 None:intergenic 30.0%
CATCTTTAGACTCTAATCTT+TGG + chr5_2:27422577-27422596 Msa0766030:CDS 30.0%
! AGAAATTGTTAGAGTTTGCT+TGG + chr5_2:27422694-27422713 Msa0766030:CDS 30.0%
! GAAATTGTTAGAGTTTGCTT+GGG + chr5_2:27422695-27422714 Msa0766030:CDS 30.0%
! AAATTGTTAGAGTTTGCTTG+GGG + chr5_2:27422696-27422715 Msa0766030:CDS 30.0%
TGATTCAAAACTTTCTCTTG+TGG - chr5_2:27422849-27422868 None:intergenic 30.0%
CGCAAATAATTCTACTAGTA+AGG - chr5_2:27422977-27422996 None:intergenic 30.0%
GTAGAATTATTTGCGAAGAA+TGG + chr5_2:27422982-27423001 Msa0766030:CDS 30.0%
ACTGATTAATGAATTGATGG+TGG + chr5_2:27423055-27423074 Msa0766030:CDS 30.0%
! CTGATTAATGAATTGATGGT+GGG + chr5_2:27423056-27423075 Msa0766030:CDS 30.0%
! GTTTTCTGTAATAACACCAT+AGG + chr5_2:27423359-27423378 Msa0766030:three_prime_UTR 30.0%
TGGATTTATAAAGCTTCCTA+TGG - chr5_2:27423378-27423397 None:intergenic 30.0%
! TTATGAGCTAAATTTGGAAC+CGG - chr5_2:27423401-27423420 None:intergenic 30.0%
CCAATTTGTCCAATTAACAT+TGG - chr5_2:27423460-27423479 None:intergenic 30.0%
CCAATGTTAATTGGACAAAT+TGG + chr5_2:27423457-27423476 Msa0766030:three_prime_UTR 30.0%
TTAACTCCATTTCCAGTTCA+AGG + chr5_2:27421708-27421727 Msa0766030:CDS 35.0%
AGGTTATTTGAAAGCCTCTA+AGG - chr5_2:27421773-27421792 None:intergenic 35.0%
AAACGATTGCTCAAATCAAG+AGG + chr5_2:27421816-27421835 Msa0766030:CDS 35.0%
!! GTTAAACCATCAAAGGCATT+TGG - chr5_2:27421843-27421862 None:intergenic 35.0%
CAAGAAATTCACCAAAGAAG+TGG - chr5_2:27421974-27421993 None:intergenic 35.0%
GAAACTAAACAAGTAACTGG+AGG - chr5_2:27422032-27422051 None:intergenic 35.0%
AGAAGTAACATGCACTACAT+GGG - chr5_2:27422121-27422140 None:intergenic 35.0%
TAGAAGTAACATGCACTACA+TGG - chr5_2:27422122-27422141 None:intergenic 35.0%
ACCTCTCCTATGAAGAAAAA+GGG - chr5_2:27422212-27422231 None:intergenic 35.0%
TACCTCTCCTATGAAGAAAA+AGG - chr5_2:27422213-27422232 None:intergenic 35.0%
GATGAGAGTTATCTAACAGA+TGG + chr5_2:27422285-27422304 Msa0766030:intron 35.0%
! AGTATTGAAAACAATGGCTG+AGG - chr5_2:27422445-27422464 None:intergenic 35.0%
TTTCCATCTCTATACACCAT+TGG + chr5_2:27422510-27422529 Msa0766030:CDS 35.0%
! AAAAGAAGCTAATGGACCAA+TGG - chr5_2:27422529-27422548 None:intergenic 35.0%
AAGATACTAAATGTCTCGAG+TGG + chr5_2:27422604-27422623 Msa0766030:CDS 35.0%
!!! ACAGCAAGAAACCTTTTTTG+TGG + chr5_2:27422727-27422746 Msa0766030:CDS 35.0%
GGCCTAATAATCCACAAAAA+AGG - chr5_2:27422741-27422760 None:intergenic 35.0%
! ATTAGGCCTGATCTTGTTAT+TGG + chr5_2:27422753-27422772 Msa0766030:CDS 35.0%
! TCAAGAATCCACTGATTGAA+GGG - chr5_2:27422872-27422891 None:intergenic 35.0%
TAATTCTACTAGTAAGGGGT+TGG - chr5_2:27422971-27422990 None:intergenic 35.0%
TGATACCAATGTAAAGAGAG+AGG + chr5_2:27423022-27423041 Msa0766030:CDS 35.0%
TGGTAGTTCATACATGAACT+TGG + chr5_2:27423151-27423170 Msa0766030:CDS 35.0%
GAACTTGGACAAAGTGATTA+AGG + chr5_2:27423166-27423185 Msa0766030:CDS 35.0%
! AGGAAGCTTTATAAATCCAC+CGG + chr5_2:27423379-27423398 Msa0766030:three_prime_UTR 35.0%
TTAACTCCATTTCCAGTTCA+AGG + chr5_2:27421708-27421727 Msa0766030:CDS 35.0%
AGGTTATTTGAAAGCCTCTA+AGG - chr5_2:27421773-27421792 None:intergenic 35.0%
AAACGATTGCTCAAATCAAG+AGG + chr5_2:27421816-27421835 Msa0766030:CDS 35.0%
!! GTTAAACCATCAAAGGCATT+TGG - chr5_2:27421843-27421862 None:intergenic 35.0%
CAAGAAATTCACCAAAGAAG+TGG - chr5_2:27421974-27421993 None:intergenic 35.0%
GAAACTAAACAAGTAACTGG+AGG - chr5_2:27422032-27422051 None:intergenic 35.0%
AGAAGTAACATGCACTACAT+GGG - chr5_2:27422121-27422140 None:intergenic 35.0%
TAGAAGTAACATGCACTACA+TGG - chr5_2:27422122-27422141 None:intergenic 35.0%
ACCTCTCCTATGAAGAAAAA+GGG - chr5_2:27422212-27422231 None:intergenic 35.0%
TACCTCTCCTATGAAGAAAA+AGG - chr5_2:27422213-27422232 None:intergenic 35.0%
GATGAGAGTTATCTAACAGA+TGG + chr5_2:27422285-27422304 Msa0766030:intron 35.0%
! AGTATTGAAAACAATGGCTG+AGG - chr5_2:27422445-27422464 None:intergenic 35.0%
TTTCCATCTCTATACACCAT+TGG + chr5_2:27422510-27422529 Msa0766030:CDS 35.0%
! AAAAGAAGCTAATGGACCAA+TGG - chr5_2:27422529-27422548 None:intergenic 35.0%
AAGATACTAAATGTCTCGAG+TGG + chr5_2:27422604-27422623 Msa0766030:CDS 35.0%
!!! ACAGCAAGAAACCTTTTTTG+TGG + chr5_2:27422727-27422746 Msa0766030:CDS 35.0%
GGCCTAATAATCCACAAAAA+AGG - chr5_2:27422741-27422760 None:intergenic 35.0%
! ATTAGGCCTGATCTTGTTAT+TGG + chr5_2:27422753-27422772 Msa0766030:CDS 35.0%
! TCAAGAATCCACTGATTGAA+GGG - chr5_2:27422872-27422891 None:intergenic 35.0%
TAATTCTACTAGTAAGGGGT+TGG - chr5_2:27422971-27422990 None:intergenic 35.0%
TGATACCAATGTAAAGAGAG+AGG + chr5_2:27423022-27423041 Msa0766030:CDS 35.0%
TGGTAGTTCATACATGAACT+TGG + chr5_2:27423151-27423170 Msa0766030:CDS 35.0%
GAACTTGGACAAAGTGATTA+AGG + chr5_2:27423166-27423185 Msa0766030:CDS 35.0%
! AGGAAGCTTTATAAATCCAC+CGG + chr5_2:27423379-27423398 Msa0766030:three_prime_UTR 35.0%
AATGGAGTTAACACTGCATG+TGG - chr5_2:27421699-27421718 None:intergenic 40.0%
! ATATGGCCTTGAACTGGAAA+TGG - chr5_2:27421717-27421736 None:intergenic 40.0%
GGAAAACTACTTCACCTTAG+AGG + chr5_2:27421756-27421775 Msa0766030:CDS 40.0%
!! ACCTTTGAGACTATTCCAGA+TGG + chr5_2:27421870-27421889 Msa0766030:CDS 40.0%
! ACCATCTGGAATAGTCTCAA+AGG - chr5_2:27421874-27421893 None:intergenic 40.0%
TCAGCAGCATCTACTGTAAA+TGG - chr5_2:27422068-27422087 None:intergenic 40.0%
CATGGGGAAAAGAGAACAAT+TGG - chr5_2:27422104-27422123 None:intergenic 40.0%
GAAGTAACATGCACTACATG+GGG - chr5_2:27422120-27422139 None:intergenic 40.0%
! TCCCTTTTTCTTCATAGGAG+AGG + chr5_2:27422208-27422227 Msa0766030:intron 40.0%
ATAGAGGCCTAATAGCAAGT+TGG + chr5_2:27422820-27422839 Msa0766030:CDS 40.0%
TTGAATCACCCTTCAATCAG+TGG + chr5_2:27422861-27422880 Msa0766030:CDS 40.0%
! GTCAAGAATCCACTGATTGA+AGG - chr5_2:27422873-27422892 None:intergenic 40.0%
! AGTGGATTCTTGACTCATTG+CGG + chr5_2:27422879-27422898 Msa0766030:CDS 40.0%
AAAAATGGCCAACGCAACAT+TGG - chr5_2:27422942-27422961 None:intergenic 40.0%
ATTTGCGAAGAATGGGAGAT+TGG + chr5_2:27422990-27423009 Msa0766030:CDS 40.0%
TTTGCGAAGAATGGGAGATT+GGG + chr5_2:27422991-27423010 Msa0766030:CDS 40.0%
TACCAATGTAAAGAGAGAGG+AGG + chr5_2:27423025-27423044 Msa0766030:CDS 40.0%
TACCTCCTCTCTCTTTACAT+TGG - chr5_2:27423030-27423049 None:intergenic 40.0%
GAGAGAAAGGAAAGAAGATG+AGG + chr5_2:27423078-27423097 Msa0766030:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG + chr5_2:27423085-27423104 Msa0766030:CDS 40.0%
GAAAACAGAAGAGCTTCACA+TGG - chr5_2:27423345-27423364 None:intergenic 40.0%
!! CGATGCTCTTGGTTTTCTTT+CGG - chr5_2:27423437-27423456 None:intergenic 40.0%
ATTAACATTGGCGATGCTCT+TGG - chr5_2:27423448-27423467 None:intergenic 40.0%
!! AGAGCATCGCCAATGTTAAT+TGG + chr5_2:27423448-27423467 Msa0766030:three_prime_UTR 40.0%
AATGGAGTTAACACTGCATG+TGG - chr5_2:27421699-27421718 None:intergenic 40.0%
! ATATGGCCTTGAACTGGAAA+TGG - chr5_2:27421717-27421736 None:intergenic 40.0%
GGAAAACTACTTCACCTTAG+AGG + chr5_2:27421756-27421775 Msa0766030:CDS 40.0%
!! ACCTTTGAGACTATTCCAGA+TGG + chr5_2:27421870-27421889 Msa0766030:CDS 40.0%
! ACCATCTGGAATAGTCTCAA+AGG - chr5_2:27421874-27421893 None:intergenic 40.0%
TCAGCAGCATCTACTGTAAA+TGG - chr5_2:27422068-27422087 None:intergenic 40.0%
CATGGGGAAAAGAGAACAAT+TGG - chr5_2:27422104-27422123 None:intergenic 40.0%
GAAGTAACATGCACTACATG+GGG - chr5_2:27422120-27422139 None:intergenic 40.0%
! TCCCTTTTTCTTCATAGGAG+AGG + chr5_2:27422208-27422227 Msa0766030:intron 40.0%
ATAGAGGCCTAATAGCAAGT+TGG + chr5_2:27422820-27422839 Msa0766030:CDS 40.0%
TTGAATCACCCTTCAATCAG+TGG + chr5_2:27422861-27422880 Msa0766030:CDS 40.0%
! GTCAAGAATCCACTGATTGA+AGG - chr5_2:27422873-27422892 None:intergenic 40.0%
! AGTGGATTCTTGACTCATTG+CGG + chr5_2:27422879-27422898 Msa0766030:CDS 40.0%
AAAAATGGCCAACGCAACAT+TGG - chr5_2:27422942-27422961 None:intergenic 40.0%
ATTTGCGAAGAATGGGAGAT+TGG + chr5_2:27422990-27423009 Msa0766030:CDS 40.0%
TTTGCGAAGAATGGGAGATT+GGG + chr5_2:27422991-27423010 Msa0766030:CDS 40.0%
TACCAATGTAAAGAGAGAGG+AGG + chr5_2:27423025-27423044 Msa0766030:CDS 40.0%
TACCTCCTCTCTCTTTACAT+TGG - chr5_2:27423030-27423049 None:intergenic 40.0%
GAGAGAAAGGAAAGAAGATG+AGG + chr5_2:27423078-27423097 Msa0766030:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG + chr5_2:27423085-27423104 Msa0766030:CDS 40.0%
GAAAACAGAAGAGCTTCACA+TGG - chr5_2:27423345-27423364 None:intergenic 40.0%
!! CGATGCTCTTGGTTTTCTTT+CGG - chr5_2:27423437-27423456 None:intergenic 40.0%
ATTAACATTGGCGATGCTCT+TGG - chr5_2:27423448-27423467 None:intergenic 40.0%
!! AGAGCATCGCCAATGTTAAT+TGG + chr5_2:27423448-27423467 Msa0766030:three_prime_UTR 40.0%
! GGATTGATATGGCCTTGAAC+TGG - chr5_2:27421723-27421742 None:intergenic 45.0%
AGAGGTCCAAATGCCTTTGA+TGG + chr5_2:27421834-27421853 Msa0766030:CDS 45.0%
TCCAGATGGTTTAACTCCGA+CGG + chr5_2:27421884-27421903 Msa0766030:CDS 45.0%
AATGGTGTGCTACCACTCAA+AGG + chr5_2:27422173-27422192 Msa0766030:CDS 45.0%
GGACCAATGGTGTATAGAGA+TGG - chr5_2:27422516-27422535 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG + chr5_2:27422701-27422720 Msa0766030:CDS 45.0%
!! AGGCCTGATCTTGTTATTGG+TGG + chr5_2:27422756-27422775 Msa0766030:CDS 45.0%
GAGCCACCAATAACAAGATC+AGG - chr5_2:27422762-27422781 None:intergenic 45.0%
!! TCTTGTTATTGGTGGCTCAG+AGG + chr5_2:27422764-27422783 Msa0766030:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG - chr5_2:27422830-27422849 None:intergenic 45.0%
GATTCTTGACTCATTGCGGA+TGG + chr5_2:27422883-27422902 Msa0766030:CDS 45.0%
! ACCACTGAAAGTGTATGTGC+TGG + chr5_2:27422912-27422931 Msa0766030:CDS 45.0%
TCCAGCACATACACTTTCAG+TGG - chr5_2:27422916-27422935 None:intergenic 45.0%
!! AGGGGTTGGTCAGCAAAAAA+TGG - chr5_2:27422957-27422976 None:intergenic 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG + chr5_2:27423065-27423084 Msa0766030:CDS 45.0%
! TGAGCTAAATTTGGAACCGG+TGG - chr5_2:27423398-27423417 None:intergenic 45.0%
! GGATTGATATGGCCTTGAAC+TGG - chr5_2:27421723-27421742 None:intergenic 45.0%
AGAGGTCCAAATGCCTTTGA+TGG + chr5_2:27421834-27421853 Msa0766030:CDS 45.0%
TCCAGATGGTTTAACTCCGA+CGG + chr5_2:27421884-27421903 Msa0766030:CDS 45.0%
AATGGTGTGCTACCACTCAA+AGG + chr5_2:27422173-27422192 Msa0766030:CDS 45.0%
GGACCAATGGTGTATAGAGA+TGG - chr5_2:27422516-27422535 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG + chr5_2:27422701-27422720 Msa0766030:CDS 45.0%
!! AGGCCTGATCTTGTTATTGG+TGG + chr5_2:27422756-27422775 Msa0766030:CDS 45.0%
GAGCCACCAATAACAAGATC+AGG - chr5_2:27422762-27422781 None:intergenic 45.0%
!! TCTTGTTATTGGTGGCTCAG+AGG + chr5_2:27422764-27422783 Msa0766030:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG - chr5_2:27422830-27422849 None:intergenic 45.0%
GATTCTTGACTCATTGCGGA+TGG + chr5_2:27422883-27422902 Msa0766030:CDS 45.0%
! ACCACTGAAAGTGTATGTGC+TGG + chr5_2:27422912-27422931 Msa0766030:CDS 45.0%
TCCAGCACATACACTTTCAG+TGG - chr5_2:27422916-27422935 None:intergenic 45.0%
!! AGGGGTTGGTCAGCAAAAAA+TGG - chr5_2:27422957-27422976 None:intergenic 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG + chr5_2:27423065-27423084 Msa0766030:CDS 45.0%
! TGAGCTAAATTTGGAACCGG+TGG - chr5_2:27423398-27423417 None:intergenic 45.0%
TCCGTCGGAGTTAAACCATC+TGG - chr5_2:27421888-27421907 None:intergenic 50.0%
GATGGTTTAACTCCGACGGA+TGG + chr5_2:27421888-27421907 Msa0766030:CDS 50.0%
TTAACTCCGACGGATGGTGA+TGG + chr5_2:27421894-27421913 Msa0766030:CDS 50.0%
ACATCTCCATCACCATCCGT+CGG - chr5_2:27421903-27421922 None:intergenic 50.0%
GCTAAAGTTGACGCGATTCC+AGG + chr5_2:27422318-27422337 Msa0766030:CDS 50.0%
GAAGATGAGGCAAAAGGCCA+CGG + chr5_2:27423091-27423110 Msa0766030:CDS 50.0%
TGCCTTCTTCTTCAACTCCG+TGG - chr5_2:27423111-27423130 None:intergenic 50.0%
GGAGTTGAAGAAGAAGGCAG+AGG + chr5_2:27423112-27423131 Msa0766030:CDS 50.0%
GCAGAGGAAGACACAAGACT+CGG + chr5_2:27423128-27423147 Msa0766030:CDS 50.0%
TCCGTCGGAGTTAAACCATC+TGG - chr5_2:27421888-27421907 None:intergenic 50.0%
GATGGTTTAACTCCGACGGA+TGG + chr5_2:27421888-27421907 Msa0766030:CDS 50.0%
TTAACTCCGACGGATGGTGA+TGG + chr5_2:27421894-27421913 Msa0766030:CDS 50.0%
ACATCTCCATCACCATCCGT+CGG - chr5_2:27421903-27421922 None:intergenic 50.0%
GCTAAAGTTGACGCGATTCC+AGG + chr5_2:27422318-27422337 Msa0766030:CDS 50.0%
GAAGATGAGGCAAAAGGCCA+CGG + chr5_2:27423091-27423110 Msa0766030:CDS 50.0%
TGCCTTCTTCTTCAACTCCG+TGG - chr5_2:27423111-27423130 None:intergenic 50.0%
GGAGTTGAAGAAGAAGGCAG+AGG + chr5_2:27423112-27423131 Msa0766030:CDS 50.0%
GCAGAGGAAGACACAAGACT+CGG + chr5_2:27423128-27423147 Msa0766030:CDS 50.0%
CTTCATGACTCTGCCACTGC+TGG + chr5_2:27421999-27422018 Msa0766030:CDS 55.0%
TGGAGGGATAAGACCAGCAG+TGG - chr5_2:27422015-27422034 None:intergenic 55.0%
! CTGGAGTGCCAATGTTGCGT+TGG + chr5_2:27422931-27422950 Msa0766030:CDS 55.0%
GGCCACGGAGTTGAAGAAGA+AGG + chr5_2:27423106-27423125 Msa0766030:CDS 55.0%
GAGGAAGACACAAGACTCGG+TGG + chr5_2:27423131-27423150 Msa0766030:CDS 55.0%
CTTCATGACTCTGCCACTGC+TGG + chr5_2:27421999-27422018 Msa0766030:CDS 55.0%
TGGAGGGATAAGACCAGCAG+TGG - chr5_2:27422015-27422034 None:intergenic 55.0%
! CTGGAGTGCCAATGTTGCGT+TGG + chr5_2:27422931-27422950 Msa0766030:CDS 55.0%
GGCCACGGAGTTGAAGAAGA+AGG + chr5_2:27423106-27423125 Msa0766030:CDS 55.0%
GAGGAAGACACAAGACTCGG+TGG + chr5_2:27423131-27423150 Msa0766030:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 27421599 27423509 27421599 ID=Msa0766030;Name=Msa0766030
chr5_2 mRNA 27421599 27423509 27421599 ID=Msa0766030-mRNA-1;Parent=Msa0766030;Name=Msa0766030-mRNA-1;_AED=0.02;_eAED=0.02;_QI=73|1|1|1|1|1|2|301|481
chr5_2 exon 27421599 27422194 27421599 ID=Msa0766030-mRNA-1:exon:10720;Parent=Msa0766030-mRNA-1
chr5_2 exon 27422286 27423509 27422286 ID=Msa0766030-mRNA-1:exon:10721;Parent=Msa0766030-mRNA-1
chr5_2 five_prime_UTR 27421599 27421671 27421599 ID=Msa0766030-mRNA-1:five_prime_utr;Parent=Msa0766030-mRNA-1
chr5_2 CDS 27421672 27422194 27421672 ID=Msa0766030-mRNA-1:cds;Parent=Msa0766030-mRNA-1
chr5_2 CDS 27422286 27423208 27422286 ID=Msa0766030-mRNA-1:cds;Parent=Msa0766030-mRNA-1
chr5_2 three_prime_UTR 27423209 27423509 27423209 ID=Msa0766030-mRNA-1:three_prime_utr;Parent=Msa0766030-mRNA-1
Gene Sequence

>Msa0766030

ATGAGTGACTATGCAGAAAAAAAACCACATGCAGTGTTAACTCCATTTCCAGTTCAAGGCCATATCAATCCAATGTTGAAACTAGGAAAACTACTTCACCTTAGAGGCTTTCAAATAACCTTTGTTAACACTGAATACAATCACAAACGATTGCTCAAATCAAGAGGTCCAAATGCCTTTGATGGTTTAACTGATTTTACCTTTGAGACTATTCCAGATGGTTTAACTCCGACGGATGGTGATGGAGATGTTAGTCAAGACTTACGCGCTCTTTGTCTATCAATCATGAAGAATTTTCACCACTTCTTTGGTGAATTTCTTGCTAAACTTCATGACTCTGCCACTGCTGGTCTTATCCCTCCAGTTACTTGTTTAGTTTCTGATTACAACATGCCATTTACAGTAGATGCTGCTGAAGAACATGAACTTCCAATTGTTCTCTTTTCCCCATGTAGTGCATGTTACTTCTATTCTACTTTTCATATTTCTAAATTGTTTAAGAATGGTGTGCTACCACTCAAAGATGAGAGTTATCTAACAGATGGATATTTGGACGCTAAAGTTGACGCGATTCCAGGTTTGAAAAACATTAGTTTGAAGGATATTCCTGATATAATGAGGATAAAAGATCCTGATTTGATAAAATATAAAAGTCAAGAGACAGATAAATGTCATAGAGCCTCAGCCATTGTTTTCAATACTTCTAATGAACTCGAGAGTGATGCTATGAATGCTCTTAATTCTATATTTCCATCTCTATACACCATTGGTCCATTAGCTTCTTTTGTAAATCAAAGTCCACAAAATCACTTGACATCTTTAGACTCTAATCTTTGGAAAGAAGATACTAAATGTCTCGAGTGGCTTGAATCGAAAGAACCAAAATCTGTTGTTTATGTAAATTTTGGCAGCATTACTGTTATGTCTCAAGAGAAATTGTTAGAGTTTGCTTGGGGTTTGGCGAACAGCAAGAAACCTTTTTTGTGGATTATTAGGCCTGATCTTGTTATTGGTGGCTCAGAGGTGTTGTCATCTGATTTTTTGAAAGAAATTTCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTTTTGAATCACCCTTCAATCAGTGGATTCTTGACTCATTGCGGATGGAAGTCAACCACTGAAAGTGTATGTGCTGGAGTGCCAATGTTGCGTTGGCCATTTTTTGCTGACCAACCCCTTACTAGTAGAATTATTTGCGAAGAATGGGAGATTGGGATGAAAATTGATACCAATGTAAAGAGAGAGGAGGTAGAGAAACTGATTAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGCAAAAGGCCACGGAGTTGAAGAAGAAGGCAGAGGAAGACACAAGACTCGGTGGTAGTTCATACATGAACTTGGACAAAGTGATTAAGGATGTCTTGCTTAAAATGTGA
Protein sequence

>Msa0766030

MSDYAEKKPHAVLTPFPVQGHINPMLKLGKLLHLRGFQITFVNTEYNHKRLLKSRGPNAFDGLTDFTFETIPDGLTPTDGDGDVSQDLRALCLSIMKNFHHFFGEFLAKLHDSATAGLIPPVTCLVSDYNMPFTVDAAEEHELPIVLFSPCSACYFYSTFHISKLFKNGVLPLKDESYLTDGYLDAKVDAIPGLKNISLKDIPDIMRIKDPDLIKYKSQETDKCHRASAIVFNTSNELESDAMNALNSIFPSLYTIGPLASFVNQSPQNHLTSLDSNLWKEDTKCLEWLESKEPKSVVYVNFGSITVMSQEKLLEFAWGLANSKKPFLWIIRPDLVIGGSEVLSSDFLKEISDRGLIASWCPQEKVLNHPSISGFLTHCGWKSTTESVCAGVPMLRWPFFADQPLTSRIICEEWEIGMKIDTNVKREEVEKLINELMVGEKGKKMRQKATELKKKAEEDTRLGGSSYMNLDKVIKDVLLKM*