AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0402640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 192 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACATTCATAACCCATAATT+TGG 0.133173 3_2:-31030686 None:intergenic
CCCTGGATTCTCCCAAATTA+TGG 0.203218 3_2:+31030674 Msa0402640:three_prime_UTR
GGTGGTTACTGGATACTTTC+TGG 0.206385 3_2:+31029512 Msa0402640:three_prime_UTR
TGTGGTTTCTTCTATATCTT+AGG 0.232416 3_2:+31027890 Msa0402640:three_prime_UTR
CCTGCAATCATTGGTGTTCT+TGG 0.240795 3_2:+31029153 Msa0402640:three_prime_UTR
CAATGCAATTTCTCTTCTTC+AGG 0.249924 3_2:-31028175 None:intergenic
ATCCTCGTGATCCACCATTT+TGG 0.266351 3_2:-31033005 None:intergenic
TTCTTAGACCTGGTGGTTAC+TGG 0.278416 3_2:+31029501 Msa0402640:three_prime_UTR
CCTTCCTTCAATGATTTCAT+AGG 0.286945 3_2:+31027079 Msa0402640:CDS
TTGAGGAGGACAACCGATTA+TGG 0.292931 3_2:+31030548 Msa0402640:three_prime_UTR
TTGTGTCTCTCATTCACATA+TGG 0.297936 3_2:-31026971 None:intergenic
GTGTTATTCCATTGGATAAT+GGG 0.310194 3_2:+31028407 Msa0402640:three_prime_UTR
TGTATGCCGTCAAGCGGTAC+TGG 0.313995 3_2:+31033053 Msa0402640:three_prime_UTR
ATGGACATGAATGCTGGTTT+TGG 0.317218 3_2:+31030637 Msa0402640:three_prime_UTR
AACAGATCCACTGGTGATTC+TGG 0.320240 3_2:-31030503 None:intergenic
CCTGGATTCTCCCAAATTAT+GGG 0.335830 3_2:+31030675 Msa0402640:three_prime_UTR
TCACATGTTTCTTCCATAAT+CGG 0.339896 3_2:-31030561 None:intergenic
CGGAATATAACCGCTCCTTC+AGG 0.347841 3_2:-31032923 None:intergenic
GTTCTCGCTGCTTGATTCCA+TGG 0.353569 3_2:+31029223 Msa0402640:three_prime_UTR
AGCACAAGTTCAATTTGCTT+TGG 0.358150 3_2:+31029119 Msa0402640:three_prime_UTR
GTCAAGCGGTACTGGGTTGC+AGG 0.358325 3_2:+31033061 Msa0402640:three_prime_UTR
TGATTGGAATTTATCATGAT+TGG 0.360133 3_2:+31030761 Msa0402640:three_prime_UTR
TTCTCGCTGCTTGATTCCAT+GGG 0.364909 3_2:+31029224 Msa0402640:three_prime_UTR
TTGAGAAGGCTGTGCAGAAT+TGG 0.369767 3_2:+31028296 Msa0402640:three_prime_UTR
ATATTCGAGCGTGGATTGAT+TGG 0.372018 3_2:+31030745 Msa0402640:three_prime_UTR
ATAATGCCAGGTTGCTAGTT+GGG 0.373268 3_2:+31029035 Msa0402640:intron
ACACTGCTAAACTTCTTTGC+TGG 0.373706 3_2:+31029618 Msa0402640:three_prime_UTR
TTATTGTTTCTATTATCTCC+AGG 0.375991 3_2:-31027833 None:intergenic
TGCTCTCGCTTGATCATGGC+AGG 0.376794 3_2:-31028104 None:intergenic
TAGTTGTTCTTCCAGTTGAT+TGG 0.377835 3_2:-31029539 None:intergenic
AGATTGATGAATAATGACTA+TGG 0.379527 3_2:-31033246 None:intergenic
ATTAGAACTGCATTAGATAC+TGG 0.385129 3_2:+31028433 Msa0402640:three_prime_UTR
TCTTCTATATCTTAGGTTTG+TGG 0.386477 3_2:+31027897 Msa0402640:three_prime_UTR
AGTGTTATTCCATTGGATAA+TGG 0.391930 3_2:+31028406 Msa0402640:three_prime_UTR
ATCATAGTAGAGCTTGGTTT+GGG 0.399770 3_2:+31033295 Msa0402640:three_prime_UTR
TGGTGCATGGAAGCCATTCC+CGG 0.408977 3_2:+31030459 Msa0402640:three_prime_UTR
AGTGATTTCAGCTGACATAA+TGG 0.409365 3_2:+31033104 Msa0402640:three_prime_UTR
TGGTGGAACTCAGTTTCCTC+AGG 0.413607 3_2:+31028354 Msa0402640:three_prime_UTR
GGCACATAATCACGACTCTT+AGG 0.417529 3_2:-31028241 None:intergenic
AATGAGATGGAATACCAAAA+TGG 0.420900 3_2:+31032991 Msa0402640:three_prime_UTR
ACATTCATAACCCATAATTT+GGG 0.421771 3_2:-31030685 None:intergenic
TGACATAATGGTTCTAATTG+AGG 0.423363 3_2:+31033116 Msa0402640:three_prime_UTR
TGTGTCTCTCATTCACATAT+GGG 0.425862 3_2:-31026970 None:intergenic
GTTCAATTTGCTTTGGAAAG+AGG 0.431401 3_2:+31029126 Msa0402640:three_prime_UTR
AATCATAGTAGAGCTTGGTT+TGG 0.431539 3_2:+31033294 Msa0402640:three_prime_UTR
TTGTGGCAAAGGAGTGGTTT+CGG 0.432399 3_2:+31027914 Msa0402640:three_prime_UTR
AGCGGTTATATTCCGAGATC+AGG 0.434664 3_2:+31032931 Msa0402640:three_prime_UTR
TCCTCCTCAAGCTCATCTTC+AGG 0.435903 3_2:-31029578 None:intergenic
GATATTCTACGCCGTTTCCT+TGG 0.442639 3_2:+31028218 Msa0402640:three_prime_UTR
ATATCTTAGGTTTGTGGCAA+AGG 0.443977 3_2:+31027903 Msa0402640:three_prime_UTR
CAGCAAATTCCGATGATGTC+TGG 0.447884 3_2:+31029738 Msa0402640:three_prime_UTR
CTCCGAAAAGTTCGAGGAAA+CGG 0.448698 3_2:-31026946 None:intergenic
TTTGCTGATTCACATATTGT+AGG 0.450073 3_2:-31029722 None:intergenic
ACTTGCAAGTGTTATTCCAT+TGG 0.452305 3_2:+31028399 Msa0402640:three_prime_UTR
TTTCTGGTCCTCCAATCAAC+TGG 0.454130 3_2:+31029528 Msa0402640:three_prime_UTR
GTTGCGTTGCGTTGTGATGA+AGG 0.457418 3_2:-31027108 None:intergenic
TGGTCCACTTATTTCAGAAA+AGG 0.457651 3_2:+31033027 Msa0402640:three_prime_UTR
CAAAGGAGTGGTTTCGGAAA+AGG 0.457925 3_2:+31027920 Msa0402640:three_prime_UTR
AAGTTATATATACATAAAGT+AGG 0.459480 3_2:-31033356 None:intergenic
AAACACCATTTGCATGGATA+AGG 0.463004 3_2:-31032490 None:intergenic
CACTGCTAAACTTCTTTGCT+GGG 0.463203 3_2:+31029619 Msa0402640:three_prime_UTR
CATGCACCACTAGGTTTAGC+AGG 0.463854 3_2:-31030445 None:intergenic
CCAAGAACACCAATGATTGC+AGG 0.464040 3_2:-31029153 None:intergenic
TGCAACCCAGTACCGCTTGA+CGG 0.468786 3_2:-31033059 None:intergenic
TTGTTCTTCCAGTTGATTGG+AGG 0.469936 3_2:-31029536 None:intergenic
GGAGATAATAGAAACAATAA+AGG 0.473411 3_2:+31027836 Msa0402640:three_prime_UTR
CGTTGCGTTGTGATGAAGGT+GGG 0.474601 3_2:-31027104 None:intergenic
TATTGTTTCTATTATCTCCA+GGG 0.478348 3_2:-31027832 None:intergenic
ACTTGATCATCCACATCATC+AGG 0.478380 3_2:-31028037 None:intergenic
GGAACAACATTGAGTCTCTC+CGG 0.478828 3_2:-31030478 None:intergenic
TTCTCACCGTTTGCACCCCA+TGG 0.485211 3_2:-31029240 None:intergenic
ATTATAAAGATTCATAATCA+TGG 0.485455 3_2:+31027796 Msa0402640:three_prime_UTR
AGAGGTGTTCCTGCAATCAT+TGG 0.490042 3_2:+31029144 Msa0402640:three_prime_UTR
CTCCTTCAGGCCGTAAGATA+CGG 0.496365 3_2:-31032910 None:intergenic
ACTGCATTAGATACTGGTTG+TGG 0.496504 3_2:+31028439 Msa0402640:three_prime_UTR
AACGGCGTAGAATATCCTTT+AGG 0.497535 3_2:-31028211 None:intergenic
GTCATAAGTCCTTGGATATG+TGG 0.497562 3_2:-31032468 None:intergenic
TTCATAATCATGGCGACGAA+AGG 0.498979 3_2:+31027806 Msa0402640:three_prime_UTR
CCCATAATTTGGGAGAATCC+AGG 0.500245 3_2:-31030675 None:intergenic
TGGAGATGGACCGTATCTTA+CGG 0.502790 3_2:+31032900 Msa0402640:three_prime_UTR
CGCTGGAACGCCTGATGATG+TGG 0.503863 3_2:+31028027 Msa0402640:three_prime_UTR
GTATGCCGTCAAGCGGTACT+GGG 0.506500 3_2:+31033054 Msa0402640:three_prime_UTR
TCATTGCTCTCGCTTGATCA+TGG 0.507222 3_2:-31028108 None:intergenic
GATAATGCCAGGTTGCTAGT+TGG 0.509409 3_2:+31029034 Msa0402640:intron
TATGACCTTATCCATGCAAA+TGG 0.511685 3_2:+31032485 Msa0402640:three_prime_UTR
GTTAACAAAATTATTGACTC+GGG 0.511760 3_2:+31030598 Msa0402640:three_prime_UTR
AGAATATGAATTATAGAGAA+AGG 0.514276 3_2:+31028143 Msa0402640:three_prime_UTR
ATGAGCTTGAGGAGGAGCAA+AGG 0.515379 3_2:+31029585 Msa0402640:three_prime_UTR
TGGATAAGGTCATAAGTCCT+TGG 0.516979 3_2:-31032476 None:intergenic
TGCAATGTCAATTGCACCAA+GGG 0.517748 3_2:+31029086 Msa0402640:three_prime_UTR
TGTCTCATAGCCGCACCTAA+AGG 0.517939 3_2:+31028196 Msa0402640:three_prime_UTR
TGTATCCACACAGTTATTTG+AGG 0.522368 3_2:+31030531 Msa0402640:three_prime_UTR
TTGTAAGGCGCATTTGCAAA+CGG 0.522787 3_2:-31028262 None:intergenic
AGAAAGGTGAAATTGCGATC+TGG 0.523535 3_2:+31029654 Msa0402640:three_prime_UTR
CAGAATTGGATACAGTATGA+AGG 0.524032 3_2:+31028310 Msa0402640:three_prime_UTR
CTTCAGGACGTTGCCACGCT+CGG 0.524545 3_2:-31029562 None:intergenic
TCATAATCATGGCGACGAAA+GGG 0.524702 3_2:+31027807 Msa0402640:three_prime_UTR
ACTCAAATCATAGTAGAGCT+TGG 0.525686 3_2:+31033289 Msa0402640:three_prime_UTR
TCAAAAGCTCCAGAAGGAAA+AGG 0.525704 3_2:-31029189 None:intergenic
GTGATTGTGCATTGTAGAAG+TGG 0.528947 3_2:-31027030 None:intergenic
TGCAATTTCTCTTCTTCAGG+AGG 0.530109 3_2:-31028172 None:intergenic
CTGCATTAGATACTGGTTGT+GGG 0.535379 3_2:+31028440 Msa0402640:three_prime_UTR
TGTGCTTCATGAGAGTCCCT+TGG 0.536377 3_2:-31029102 None:intergenic
TTCATTGTAGTTGCTTTGTG+TGG 0.537719 3_2:+31027872 Msa0402640:three_prime_UTR
CCATAATTTGGGAGAATCCA+GGG 0.540312 3_2:-31030674 None:intergenic
GGTTAACAAAATTATTGACT+CGG 0.540607 3_2:+31030597 Msa0402640:three_prime_UTR
ACATTGAGTCTCTCCGGGAA+TGG 0.540912 3_2:-31030472 None:intergenic
AACTTACGCATTCTTGTACA+AGG 0.541342 3_2:-31032516 None:intergenic
CTCAGGTGGATTGTACATGA+AGG 0.541515 3_2:+31029466 Msa0402640:intron
AATGTCTAGGTACAAGAAGA+TGG 0.544409 3_2:+31030408 Msa0402640:intron
GCGTTCCAGCGTCATTATCA+TGG 0.545955 3_2:-31028015 None:intergenic
CAAGTGAAAAGAATTGCAAA+AGG 0.546432 3_2:+31032968 Msa0402640:three_prime_UTR
TAGAAGTGGAATGAAAGAAC+GGG 0.546766 3_2:-31027016 None:intergenic
TAATGCCAGGTTGCTAGTTG+GGG 0.546828 3_2:+31029036 Msa0402640:intron
TCAACCGTCAGACTCTTGTA+AGG 0.547001 3_2:-31028277 None:intergenic
TCAGCACACCAACCTGATCT+CGG 0.548579 3_2:-31032943 None:intergenic
CTGCTAAACCTAGTGGTGCA+TGG 0.551940 3_2:+31030446 Msa0402640:three_prime_UTR
CAAGAGTCTGACGGTTGAGA+AGG 0.552915 3_2:+31028282 Msa0402640:three_prime_UTR
GGAAACTGAGTTCCACCACC+AGG 0.554496 3_2:-31028349 None:intergenic
AGGTGAAAACACCATTTGCA+TGG 0.559659 3_2:-31032496 None:intergenic
AATGGCTTCCATGCACCACT+AGG 0.565263 3_2:-31030454 None:intergenic
GGGTCCTATGAAATCATTGA+AGG 0.565796 3_2:-31027083 None:intergenic
TGAAATCATTGAAGGAAGGA+AGG 0.566888 3_2:-31027075 None:intergenic
ATGGGTCTCCGAAAAGTTCG+AGG 0.570628 3_2:-31026952 None:intergenic
GAACAACATTGAGTCTCTCC+GGG 0.571537 3_2:-31030477 None:intergenic
TGGGAAAAGAAACACGAGAA+AGG 0.572348 3_2:+31029638 Msa0402640:three_prime_UTR
CGACTCTTAGGCCAAGGAAA+CGG 0.575028 3_2:-31028229 None:intergenic
GGTGGAACTCAGTTTCCTCA+GGG 0.575524 3_2:+31028355 Msa0402640:three_prime_UTR
GACCGTATCTTACGGCCTGA+AGG 0.579040 3_2:+31032908 Msa0402640:three_prime_UTR
TTGATTCCATGGGGTGCAAA+CGG 0.580051 3_2:+31029234 Msa0402640:three_prime_UTR
CTATAATTCATATTCTCTCG+CGG 0.583956 3_2:-31028136 None:intergenic
CCTATGAAATCATTGAAGGA+AGG 0.585015 3_2:-31027079 None:intergenic
TATCTTACGGCCTGAAGGAG+CGG 0.591500 3_2:+31032913 Msa0402640:three_prime_UTR
GGGGAGGTATCGCAATGTGA+TGG 0.591837 3_2:+31030618 Msa0402640:three_prime_UTR
AACCACCAGGTCTAAGAACT+CGG 0.593120 3_2:-31029496 None:intergenic
AGTCCTTGGATATGTGGAGA+AGG 0.593716 3_2:-31032462 None:intergenic
GTTATATTCCGAGATCAGGT+TGG 0.595480 3_2:+31032935 Msa0402640:three_prime_UTR
TACATGAGGAACAGATCCAC+TGG 0.596376 3_2:-31030512 None:intergenic
GTAGAAGTGGAATGAAAGAA+CGG 0.597619 3_2:-31027017 None:intergenic
CACGCTCGAATATAACGCCA+AGG 0.600165 3_2:-31030735 None:intergenic
ATTGCTGAGAAAGCTACCCT+TGG 0.600623 3_2:+31030718 Msa0402640:three_prime_UTR
AGAATTGGATACAGTATGAA+GGG 0.603120 3_2:+31028311 Msa0402640:three_prime_UTR
TTAGGTTTGTGGCAAAGGAG+TGG 0.605801 3_2:+31027908 Msa0402640:three_prime_UTR
GTTGACCGAGTTCTTAGACC+TGG 0.606390 3_2:+31029491 Msa0402640:three_prime_UTR
CTGAAATCACTATGAGCTTG+TGG 0.608795 3_2:-31033092 None:intergenic
ACTACAATGAAAATTGACAC+TGG 0.609222 3_2:-31027860 None:intergenic
ACATGTGAATGCTTACAAGC+GGG 0.609421 3_2:+31030576 Msa0402640:three_prime_UTR
TAATCACGACTCTTAGGCCA+AGG 0.609435 3_2:-31028235 None:intergenic
GCGTTGCGTTGTGATGAAGG+TGG 0.613414 3_2:-31027105 None:intergenic
TTTGGTTTGGTTTAAAACAG+CGG 0.614670 3_2:-31033383 None:intergenic
GAGATGGAATACCAAAATGG+TGG 0.616902 3_2:+31032994 Msa0402640:three_prime_UTR
TGCATTAGATACTGGTTGTG+GGG 0.616968 3_2:+31028441 Msa0402640:three_prime_UTR
ATCCACACAGTTATTTGAGG+AGG 0.617680 3_2:+31030534 Msa0402640:three_prime_UTR
AAGCCTTCTCCACATATCCA+AGG 0.620857 3_2:+31032459 Msa0402640:three_prime_UTR
AAGCAATTACCAGACATCAT+CGG 0.621464 3_2:-31029747 None:intergenic
AAAATGGTGGATCACGAGGA+TGG 0.621832 3_2:+31033007 Msa0402640:three_prime_UTR
GATCCACTGGTGATTCTGGT+AGG 0.622673 3_2:-31030499 None:intergenic
AATGTGATGGACATGAATGC+TGG 0.624533 3_2:+31030631 Msa0402640:three_prime_UTR
GACCGAGTTCTTAGACCTGG+TGG 0.625195 3_2:+31029494 Msa0402640:three_prime_UTR
GGAAGAACAACTACCGAGCG+TGG 0.625378 3_2:+31029549 Msa0402640:three_prime_UTR
ACAAAATTATTGACTCGGGG+AGG 0.625557 3_2:+31030602 Msa0402640:three_prime_UTR
AACATGTGAATGCTTACAAG+CGG 0.626082 3_2:+31030575 Msa0402640:three_prime_UTR
CTAATCATCCCATTATCCAA+TGG 0.627524 3_2:-31028415 None:intergenic
ACTCACCATGATAATGACGC+TGG 0.628103 3_2:+31028010 Msa0402640:three_prime_UTR
TCCTGAAGATGAGCTTGAGG+AGG 0.630377 3_2:+31029577 Msa0402640:three_prime_UTR
GCTCTCGCTTGATCATGGCA+GGG 0.633453 3_2:-31028103 None:intergenic
GTAGCTTTCTCAGCAATCGT+AGG 0.633580 3_2:-31030712 None:intergenic
ATGGCGACGAAAGGGAACCC+TGG 0.633656 3_2:+31027815 Msa0402640:three_prime_UTR
TACCAAAATGGTGGATCACG+AGG 0.638902 3_2:+31033003 Msa0402640:three_prime_UTR
GAATTGCAAAAGGAATGAGA+TGG 0.639259 3_2:+31032978 Msa0402640:three_prime_UTR
CACAACGCAACGCAACGCAA+CGG 0.643294 3_2:+31027115 Msa0402640:CDS
TTAACAAAATTATTGACTCG+GGG 0.644245 3_2:+31030599 Msa0402640:three_prime_UTR
CTTGGCGTTATATTCGAGCG+TGG 0.650173 3_2:+31030736 Msa0402640:three_prime_UTR
GCATTAAACATTGATGAATG+CGG 0.650787 3_2:+31029683 Msa0402640:three_prime_UTR
GAAAGTATCCAGTAACCACC+AGG 0.652413 3_2:-31029509 None:intergenic
GTTGCGTTGTGATGAAGGTG+GGG 0.659202 3_2:-31027103 None:intergenic
AATAACTGTGTGGATACATG+AGG 0.659395 3_2:-31030526 None:intergenic
AGGTCTTGTATGCCGTCAAG+CGG 0.663670 3_2:+31033047 Msa0402640:three_prime_UTR
GCCATGTCAAAAGCTCCAGA+AGG 0.665789 3_2:-31029195 None:intergenic
ACGTCCTGAAGATGAGCTTG+AGG 0.668730 3_2:+31029574 Msa0402640:three_prime_UTR
TCGATGTAGCTATCGTCACA+AGG 0.669385 3_2:-31028073 None:intergenic
TTGCAATGTCAATTGCACCA+AGG 0.673230 3_2:+31029085 Msa0402640:three_prime_UTR
GTCCTCCTCAAATAACTGTG+TGG 0.682256 3_2:-31030536 None:intergenic
TCTCGCTGCTTGATTCCATG+GGG 0.683640 3_2:+31029225 Msa0402640:three_prime_UTR
GTAACTCCTGCTAAACCTAG+TGG 0.692700 3_2:+31030439 Msa0402640:three_prime_UTR
GAAACTGAGTTCCACCACCA+GGG 0.695348 3_2:-31028348 None:intergenic
TGCGCCTTACAAGAGTCTGA+CGG 0.697082 3_2:+31028273 Msa0402640:three_prime_UTR
TGATGTGGATGATCAAGTCA+AGG 0.697083 3_2:+31028042 Msa0402640:three_prime_UTR
GTTCCTACCAGAATCACCAG+TGG 0.702298 3_2:+31030496 Msa0402640:three_prime_UTR
CGTAGAATATCCTTTAGGTG+CGG 0.702529 3_2:-31028206 None:intergenic
ACGCTCGAATATAACGCCAA+GGG 0.703437 3_2:-31030734 None:intergenic
ATGTAAGCATCAGCACCCTG+AGG 0.736890 3_2:-31028370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGAAAAAAATTAAAAAATT+GGG - chr3_2:31027221-31027240 None:intergenic 10.0%
!! AAGGAAAAAAATTAAAAAAT+TGG - chr3_2:31027222-31027241 None:intergenic 10.0%
!! AGTTTATTTATATATAAACA+AGG - chr3_2:31028493-31028512 None:intergenic 10.0%
!! ATATAAATAAACTATTTAGT+TGG + chr3_2:31028500-31028519 Msa0402640:intron 10.0%
!! ATTATAACATATAATATCTT+TGG + chr3_2:31031966-31031985 Msa0402640:intron 10.0%
!! TTTATATACTACAAAAATTA+AGG - chr3_2:31033226-31033245 None:intergenic 10.0%
!! ATTATAAAGATTCATAATCA+TGG + chr3_2:31027796-31027815 Msa0402640:three_prime_UTR 15.0%
!! TTGATTGAAATATAATCTAT+TGG + chr3_2:31029288-31029307 Msa0402640:intron 15.0%
!! GATTATTAAACCATAATAAT+TGG + chr3_2:31029434-31029453 Msa0402640:intron 15.0%
!! AATGCATATAGAATAAAAAT+CGG - chr3_2:31030046-31030065 None:intergenic 15.0%
!! ATCTAATCCATTTATAAATT+AGG + chr3_2:31031027-31031046 Msa0402640:intron 15.0%
!! TTAATTAAATAAACAGAACA+AGG - chr3_2:31032415-31032434 None:intergenic 15.0%
!! AAGTTATATATACATAAAGT+AGG - chr3_2:31033359-31033378 None:intergenic 15.0%
!! AAAAATAAAATCTGTTACAG+CGG - chr3_2:31027180-31027199 None:intergenic 20.0%
!!! TATTATGTAGGGATTTTATA+AGG + chr3_2:31027759-31027778 Msa0402640:intron 20.0%
!! AGAATATGAATTATAGAGAA+AGG + chr3_2:31028143-31028162 Msa0402640:three_prime_UTR 20.0%
!! TATATATAAACAAGGATGTT+AGG - chr3_2:31028485-31028504 None:intergenic 20.0%
!!! AGAATACTAATGAGTTTTTT+TGG + chr3_2:31029259-31029278 Msa0402640:intron 20.0%
!! GATTATATTTCAATCAACAT+TGG - chr3_2:31029285-31029304 None:intergenic 20.0%
!! GAAAAAAGTTCCAATTATTA+TGG - chr3_2:31029447-31029466 None:intergenic 20.0%
!! AGCAAAAGAAAAAAAGAAAA+GGG - chr3_2:31029787-31029806 None:intergenic 20.0%
!! AAGCAAAAGAAAAAAAGAAA+AGG - chr3_2:31029788-31029807 None:intergenic 20.0%
!!! TGTTTTTCTTTTCAAAAACA+GGG - chr3_2:31029945-31029964 None:intergenic 20.0%
!!! TTTTTGAAAAGAAAAACAGA+TGG + chr3_2:31029947-31029966 Msa0402640:intron 20.0%
!!! AATTTTATTAGTCATTGAGT+TGG + chr3_2:31030841-31030860 Msa0402640:intron 20.0%
!! TTGACATCCTAATTTATAAA+TGG - chr3_2:31031037-31031056 None:intergenic 20.0%
!!! AAAGAGAAGTGTAAATATTA+TGG + chr3_2:31031093-31031112 Msa0402640:intron 20.0%
!! AAAAAAAGTAACAATGAAGT+AGG + chr3_2:31031138-31031157 Msa0402640:intron 20.0%
!!! GATTTATTCAGAATTTTGAA+TGG + chr3_2:31031172-31031191 Msa0402640:intron 20.0%
!!! ATTGAAGAAATTTTTTGTTG+AGG + chr3_2:31031207-31031226 Msa0402640:intron 20.0%
!!! ATTTTTTGTTGAGGTTATAT+AGG + chr3_2:31031216-31031235 Msa0402640:intron 20.0%
!!! TTTTTTGTTGAGGTTATATA+GGG + chr3_2:31031217-31031236 Msa0402640:intron 20.0%
!!! ATATCTATTTGTTGTTGTTT+TGG - chr3_2:31031739-31031758 None:intergenic 20.0%
!!! ATTTTAACAAGGTATTAAAG+TGG - chr3_2:31031899-31031918 None:intergenic 20.0%
!!! GAATCACTTAAATTTTAACA+AGG - chr3_2:31031910-31031929 None:intergenic 20.0%
!!! TTTTTAATCTGAATTTAGCA+TGG + chr3_2:31032310-31032329 Msa0402640:intron 20.0%
!!! TAATGCAGAAGATATTTTAT+TGG + chr3_2:31032880-31032899 Msa0402640:three_prime_UTR 20.0%
!!! TTCTAATTGAGGTTTTTATT+TGG + chr3_2:31033127-31033146 Msa0402640:three_prime_UTR 20.0%
!!! TCTAATTGAGGTTTTTATTT+GGG + chr3_2:31033128-31033147 Msa0402640:three_prime_UTR 20.0%
! AAAAAAGAAAAGTTGCTTAC+TGG - chr3_2:31027151-31027170 None:intergenic 25.0%
! TTTCCTTTAAATTTCCATCT+TGG + chr3_2:31027235-31027254 Msa0402640:intron 25.0%
!! AATTTCATTTTACACCATCT+AGG + chr3_2:31027512-31027531 Msa0402640:intron 25.0%
!! ATTTCATTTTACACCATCTA+GGG + chr3_2:31027513-31027532 Msa0402640:intron 25.0%
!! AAGTTCGTTTTGTATTATGT+AGG + chr3_2:31027747-31027766 Msa0402640:intron 25.0%
!! AGTTCGTTTTGTATTATGTA+GGG + chr3_2:31027748-31027767 Msa0402640:intron 25.0%
!!! TATTGTTTCTATTATCTCCA+GGG - chr3_2:31027835-31027854 None:intergenic 25.0%
!!! TTATTGTTTCTATTATCTCC+AGG - chr3_2:31027836-31027855 None:intergenic 25.0%
! GGAGATAATAGAAACAATAA+AGG + chr3_2:31027836-31027855 Msa0402640:three_prime_UTR 25.0%
! CGTGATACATTATTTAGTAA+GGG - chr3_2:31028556-31028575 None:intergenic 25.0%
! CCTTACTAAATAATGTATCA+CGG + chr3_2:31028554-31028573 Msa0402640:intron 25.0%
! TATTTAACGACATTGTTTGT+TGG + chr3_2:31028619-31028638 Msa0402640:intron 25.0%
!! GTAAAAGAGAAAATTTTGCA+TGG - chr3_2:31028919-31028938 None:intergenic 25.0%
! AGTATATGAATCCAATTCTT+AGG - chr3_2:31029403-31029422 None:intergenic 25.0%
!!! ATAATTGGAACTTTTTTCTC+AGG + chr3_2:31029449-31029468 Msa0402640:intron 25.0%
! AAAAGAAAAAAAGAAAAGGG+GGG - chr3_2:31029784-31029803 None:intergenic 25.0%
! CAAAAGAAAAAAAGAAAAGG+GGG - chr3_2:31029785-31029804 None:intergenic 25.0%
! GCAAAAGAAAAAAAGAAAAG+GGG - chr3_2:31029786-31029805 None:intergenic 25.0%
!! GAATCTGGTTTAAGAATAAT+AGG - chr3_2:31029850-31029869 None:intergenic 25.0%
!!! CTGTTTTTCTTTTCAAAAAC+AGG - chr3_2:31029946-31029965 None:intergenic 25.0%
! TTACTCATTTGCTTGTAAAA+TGG + chr3_2:31030075-31030094 Msa0402640:intron 25.0%
!! CTTAAGAAACATGTTTTCTT+AGG + chr3_2:31030119-31030138 Msa0402640:intron 25.0%
!! GTTTTCAATACTCATCTAAA+TGG + chr3_2:31030379-31030398 Msa0402640:intron 25.0%
!! GGTTAACAAAATTATTGACT+CGG + chr3_2:31030597-31030616 Msa0402640:three_prime_UTR 25.0%
!!! GTTAACAAAATTATTGACTC+GGG + chr3_2:31030598-31030617 Msa0402640:three_prime_UTR 25.0%
!!! TTAACAAAATTATTGACTCG+GGG + chr3_2:31030599-31030618 Msa0402640:three_prime_UTR 25.0%
! ACATTCATAACCCATAATTT+GGG - chr3_2:31030688-31030707 None:intergenic 25.0%
! TGATTGGAATTTATCATGAT+TGG + chr3_2:31030761-31030780 Msa0402640:three_prime_UTR 25.0%
! ATGACTAATAAAATTCACAG+AGG - chr3_2:31030836-31030855 None:intergenic 25.0%
!!! TTTGGTTCTTTATAGATTCA+AGG - chr3_2:31030889-31030908 None:intergenic 25.0%
! TGTCAACATTAAGATTATAC+TGG + chr3_2:31031051-31031070 Msa0402640:intron 25.0%
! AGTGTAAATATTATGGCATT+TGG + chr3_2:31031100-31031119 Msa0402640:intron 25.0%
!! ACAATGAAGTAGGAATATTT+TGG + chr3_2:31031148-31031167 Msa0402640:intron 25.0%
! CTGAATTATTGAATACAACA+AGG + chr3_2:31031260-31031279 Msa0402640:intron 25.0%
!! AGTCTAAGATACATATCATT+TGG + chr3_2:31031392-31031411 Msa0402640:intron 25.0%
! TGTTTATCAAAATATGCAAC+TGG - chr3_2:31031518-31031537 None:intergenic 25.0%
!!! TTGCATATTTTGATAAACAC+AGG + chr3_2:31031519-31031538 Msa0402640:intron 25.0%
!!! TGCATATTTTGATAAACACA+GGG + chr3_2:31031520-31031539 Msa0402640:intron 25.0%
! ATAGATTTATTAGTGCAACA+AGG + chr3_2:31031641-31031660 Msa0402640:intron 25.0%
! TAGATTTATTAGTGCAACAA+GGG + chr3_2:31031642-31031661 Msa0402640:intron 25.0%
!! TCTTTAAGTGTTCTAAACTT+TGG + chr3_2:31031836-31031855 Msa0402640:intron 25.0%
!! CTTTAAGTGTTCTAAACTTT+GGG + chr3_2:31031837-31031856 Msa0402640:intron 25.0%
! ACGGTAGATGTTTAATATAT+TGG + chr3_2:31032105-31032124 Msa0402640:intron 25.0%
!! TAATTATCTATTTTCTTCCC+AGG + chr3_2:31032432-31032451 Msa0402640:intron 25.0%
!!! CCAATTTGTTTTTTTGTTTC+TGG - chr3_2:31032604-31032623 None:intergenic 25.0%
! CCAGAAACAAAAAAACAAAT+TGG + chr3_2:31032601-31032620 Msa0402640:intron 25.0%
!! AGAAGATATTTTATTGGAGA+TGG + chr3_2:31032886-31032905 Msa0402640:three_prime_UTR 25.0%
!!! CTAATTGAGGTTTTTATTTG+GGG + chr3_2:31033129-31033148 Msa0402640:three_prime_UTR 25.0%
! AGATTGATGAATAATGACTA+TGG - chr3_2:31033249-31033268 None:intergenic 25.0%
! TGTTAGTTTAATGATTACCG+AGG + chr3_2:31027259-31027278 Msa0402640:intron 30.0%
GTGATCAAATATGACAGATA+CGG + chr3_2:31027307-31027326 Msa0402640:intron 30.0%
! AGTTTTCAATGTCTTTGACA+AGG - chr3_2:31027348-31027367 None:intergenic 30.0%
! GTTTTCAAATATGATGAACG+CGG + chr3_2:31027422-31027441 Msa0402640:intron 30.0%
TCACAATATGTTACACGATA+TGG - chr3_2:31027563-31027582 None:intergenic 30.0%
! TTGTGAATGTTTTCACCATA+TGG + chr3_2:31027577-31027596 Msa0402640:intron 30.0%
! ATCAGAGTTTTCAAATACGA+TGG + chr3_2:31027607-31027626 Msa0402640:intron 30.0%
CACAAACAACTGCAATATTT+CGG - chr3_2:31027681-31027700 None:intergenic 30.0%
ACTACAATGAAAATTGACAC+TGG - chr3_2:31027863-31027882 None:intergenic 30.0%
TGTGGTTTCTTCTATATCTT+AGG + chr3_2:31027890-31027909 Msa0402640:three_prime_UTR 30.0%
TCTTCTATATCTTAGGTTTG+TGG + chr3_2:31027897-31027916 Msa0402640:three_prime_UTR 30.0%
CTATAATTCATATTCTCTCG+CGG - chr3_2:31028139-31028158 None:intergenic 30.0%
AGAATTGGATACAGTATGAA+GGG + chr3_2:31028311-31028330 Msa0402640:three_prime_UTR 30.0%
! AGTATGAAGGGAATGTTTTT+AGG + chr3_2:31028323-31028342 Msa0402640:three_prime_UTR 30.0%
! AGTGTTATTCCATTGGATAA+TGG + chr3_2:31028406-31028425 Msa0402640:three_prime_UTR 30.0%
! GTGTTATTCCATTGGATAAT+GGG + chr3_2:31028407-31028426 Msa0402640:three_prime_UTR 30.0%
ATTAGAACTGCATTAGATAC+TGG + chr3_2:31028433-31028452 Msa0402640:three_prime_UTR 30.0%
CCGTGATACATTATTTAGTA+AGG - chr3_2:31028557-31028576 None:intergenic 30.0%
TTGAATGTAACAACGCATAT+CGG - chr3_2:31028775-31028794 None:intergenic 30.0%
TCTCAAATCATTATCTGTGT+TGG + chr3_2:31028806-31028825 Msa0402640:intron 30.0%
! TATGGAATCGTTTTATAACG+AGG - chr3_2:31029336-31029355 None:intergenic 30.0%
GCATTAAACATTGATGAATG+CGG + chr3_2:31029683-31029702 Msa0402640:three_prime_UTR 30.0%
!! TTTGCTGATTCACATATTGT+AGG - chr3_2:31029725-31029744 None:intergenic 30.0%
!!! CTTTTTTTCTTTTGCTTCAC+TGG + chr3_2:31029791-31029810 Msa0402640:intron 30.0%
!! AGATGAGTATTGAAAACCAA+TGG - chr3_2:31030376-31030395 None:intergenic 30.0%
TAAATGGTTAGACAATGTCT+AGG + chr3_2:31030395-31030414 Msa0402640:intron 30.0%
TCACATGTTTCTTCCATAAT+CGG - chr3_2:31030564-31030583 None:intergenic 30.0%
GACATTCATAACCCATAATT+TGG - chr3_2:31030689-31030708 None:intergenic 30.0%
AAACAGAGAAAACCAAGTTA+AGG - chr3_2:31030793-31030812 None:intergenic 30.0%
GTGAAAAAACTTTCTTGAAG+TGG - chr3_2:31030952-31030971 None:intergenic 30.0%
TTCACACATTTGTAAAACTG+TGG + chr3_2:31030967-31030986 Msa0402640:intron 30.0%
! TAATGCTTCCTTGTTTGATT+GGG - chr3_2:31031339-31031358 None:intergenic 30.0%
! ATAATGCTTCCTTGTTTGAT+TGG - chr3_2:31031340-31031359 None:intergenic 30.0%
AAACTCAGCCAAAATGAATT+CGG + chr3_2:31031421-31031440 Msa0402640:intron 30.0%
TTATCAAAATATGCAACTGG+TGG - chr3_2:31031515-31031534 None:intergenic 30.0%
ATACTAGCAATGGCTTATAT+TGG - chr3_2:31031606-31031625 None:intergenic 30.0%
!!! GTTGTTGTTTTGGTATTACA+CGG - chr3_2:31031729-31031748 None:intergenic 30.0%
! CAACTATTTTGCATTCATTG+AGG - chr3_2:31031767-31031786 None:intergenic 30.0%
AAACACATCAAACCTAATTG+CGG + chr3_2:31031790-31031809 Msa0402640:intron 30.0%
TTAAGTGATTCAAGTAGAGA+AGG + chr3_2:31031919-31031938 Msa0402640:intron 30.0%
! ATATCTTTGGTGTGTTTATC+AGG + chr3_2:31031979-31031998 Msa0402640:intron 30.0%
! TATCTTTGGTGTGTTTATCA+GGG + chr3_2:31031980-31031999 Msa0402640:intron 30.0%
!! TCCGTTTTTCTTTTAACCTT+GGG - chr3_2:31032145-31032164 None:intergenic 30.0%
GATCTGCTGAAATATGTAAT+AGG + chr3_2:31032203-31032222 Msa0402640:intron 30.0%
TTCAGATTAAAAATCTCTGC+AGG - chr3_2:31032303-31032322 None:intergenic 30.0%
TAAATAAACAGAACAAGGCT+AGG - chr3_2:31032410-31032429 None:intergenic 30.0%
TTGTAAGATACTGATAACCA+TGG - chr3_2:31032667-31032686 None:intergenic 30.0%
! ATCTCTAGTGTGTATCTTTT+TGG + chr3_2:31032737-31032756 Msa0402640:intron 30.0%
CAAGTGAAAAGAATTGCAAA+AGG + chr3_2:31032968-31032987 Msa0402640:three_prime_UTR 30.0%
AATGAGATGGAATACCAAAA+TGG + chr3_2:31032991-31033010 Msa0402640:three_prime_UTR 30.0%
!!! AAGACCTTTTCTGAAATAAG+TGG - chr3_2:31033034-31033053 None:intergenic 30.0%
!! TGACATAATGGTTCTAATTG+AGG + chr3_2:31033116-31033135 Msa0402640:three_prime_UTR 30.0%
TGTGTCTCTCATTCACATAT+GGG - chr3_2:31026973-31026992 None:intergenic 35.0%
TTGTGTCTCTCATTCACATA+TGG - chr3_2:31026974-31026993 None:intergenic 35.0%
TAGAAGTGGAATGAAAGAAC+GGG - chr3_2:31027019-31027038 None:intergenic 35.0%
GTAGAAGTGGAATGAAAGAA+CGG - chr3_2:31027020-31027039 None:intergenic 35.0%
TGAAATCATTGAAGGAAGGA+AGG - chr3_2:31027078-31027097 None:intergenic 35.0%
CCTATGAAATCATTGAAGGA+AGG - chr3_2:31027082-31027101 None:intergenic 35.0%
CCTTCCTTCAATGATTTCAT+AGG + chr3_2:31027079-31027098 Msa0402640:CDS 35.0%
CAGCCAAGATGGAAATTTAA+AGG - chr3_2:31027241-31027260 None:intergenic 35.0%
CATTAAACTAACAGCCAAGA+TGG - chr3_2:31027252-31027271 None:intergenic 35.0%
!!! ATTACCGAGGTTTTAAACAG+CGG + chr3_2:31027272-31027291 Msa0402640:intron 35.0%
TTTCAATGTCTTTGACAAGG+CGG - chr3_2:31027345-31027364 None:intergenic 35.0%
CTGTGAAAACATTCACAGTA+TGG - chr3_2:31027383-31027402 None:intergenic 35.0%
! CTGTGAATGTTTTCACAGTA+TGG + chr3_2:31027385-31027404 Msa0402640:intron 35.0%
TTTGAAAACTCTGATGTCTC+CGG - chr3_2:31027411-31027430 None:intergenic 35.0%
GACGTTATAAAATCCCTAGA+TGG - chr3_2:31027529-31027548 None:intergenic 35.0%
ACTCTGATATTTCAGCCATA+TGG - chr3_2:31027595-31027614 None:intergenic 35.0%
CGAAATATTGCAGTTGTTTG+TGG + chr3_2:31027679-31027698 Msa0402640:intron 35.0%
! TGTAGGGATTTTATAAGGTC+TGG + chr3_2:31027764-31027783 Msa0402640:intron 35.0%
! GGATTTTATAAGGTCTGGTT+TGG + chr3_2:31027769-31027788 Msa0402640:exon 35.0%
! TTCATTGTAGTTGCTTTGTG+TGG + chr3_2:31027872-31027891 Msa0402640:three_prime_UTR 35.0%
ATATCTTAGGTTTGTGGCAA+AGG + chr3_2:31027903-31027922 Msa0402640:three_prime_UTR 35.0%
CAATGCAATTTCTCTTCTTC+AGG - chr3_2:31028178-31028197 None:intergenic 35.0%
CAGAATTGGATACAGTATGA+AGG + chr3_2:31028310-31028329 Msa0402640:three_prime_UTR 35.0%
! ACTTGCAAGTGTTATTCCAT+TGG + chr3_2:31028399-31028418 Msa0402640:three_prime_UTR 35.0%
CTAATCATCCCATTATCCAA+TGG - chr3_2:31028418-31028437 None:intergenic 35.0%
AACAAGGATGTTAGGTTAGT+AGG - chr3_2:31028477-31028496 None:intergenic 35.0%
GAGCTTATAAGTATTAGCCA+GGG - chr3_2:31028696-31028715 None:intergenic 35.0%
AGAGCTTATAAGTATTAGCC+AGG - chr3_2:31028697-31028716 None:intergenic 35.0%
CAGGGTTAAAAGTGGAAAAT+GGG - chr3_2:31028954-31028973 None:intergenic 35.0%
! AGCACAAGTTCAATTTGCTT+TGG + chr3_2:31029119-31029138 Msa0402640:three_prime_UTR 35.0%
!! GTTCAATTTGCTTTGGAAAG+AGG + chr3_2:31029126-31029145 Msa0402640:three_prime_UTR 35.0%
GATCCGACTAATTAATTCCT+CGG + chr3_2:31029310-31029329 Msa0402640:intron 35.0%
AGAGACGGTTCAAACAAATA+CGG - chr3_2:31029375-31029394 None:intergenic 35.0%
AATTCTTAGGTGTCTAGAGA+CGG - chr3_2:31029390-31029409 None:intergenic 35.0%
!!! ATTGGAACTTTTTTCTCAGG+TGG + chr3_2:31029452-31029471 Msa0402640:intron 35.0%
TAGTTGTTCTTCCAGTTGAT+TGG - chr3_2:31029542-31029561 None:intergenic 35.0%
AAGCAATTACCAGACATCAT+CGG - chr3_2:31029750-31029769 None:intergenic 35.0%
AATAACCGAACTTGCGAAAT+AGG - chr3_2:31030003-31030022 None:intergenic 35.0%
TATTTCGCAAGTTCGGTTAT+TGG + chr3_2:31030002-31030021 Msa0402640:intron 35.0%
ACACCTTCAATATGAAGTGT+CGG - chr3_2:31030154-31030173 None:intergenic 35.0%
TCTCAAATTATTGCCAGTGT+AGG + chr3_2:31030233-31030252 Msa0402640:intron 35.0%
TCAGTGCTTCATAGTTACAT+AGG + chr3_2:31030284-31030303 Msa0402640:intron 35.0%
AATGTCTAGGTACAAGAAGA+TGG + chr3_2:31030408-31030427 Msa0402640:intron 35.0%
AATAACTGTGTGGATACATG+AGG - chr3_2:31030529-31030548 None:intergenic 35.0%
TGTATCCACACAGTTATTTG+AGG + chr3_2:31030531-31030550 Msa0402640:three_prime_UTR 35.0%
AACATGTGAATGCTTACAAG+CGG + chr3_2:31030575-31030594 Msa0402640:three_prime_UTR 35.0%
! GATTGGTAACTTCCTTAACT+TGG + chr3_2:31030778-31030797 Msa0402640:intron 35.0%
! CTCTGTTTTCTCTTTCCTTT+TGG + chr3_2:31030805-31030824 Msa0402640:intron 35.0%
GTAAGGACTGTATCTATGTT+TGG - chr3_2:31030907-31030926 None:intergenic 35.0%
GTTGAGGTTATATAGGGATT+CGG + chr3_2:31031223-31031242 Msa0402640:intron 35.0%
TTGAGGTTATATAGGGATTC+GGG + chr3_2:31031224-31031243 Msa0402640:intron 35.0%
! TTCCTTGTTTGATTGGGATT+AGG - chr3_2:31031333-31031352 None:intergenic 35.0%
ATCTTAGACTAACTCAGAAG+AGG - chr3_2:31031382-31031401 None:intergenic 35.0%
AACTCAGCCAAAATGAATTC+GGG + chr3_2:31031422-31031441 Msa0402640:intron 35.0%
! CTTTAGTCCCGAATTCATTT+TGG - chr3_2:31031432-31031451 None:intergenic 35.0%
AATGAATTCGGGACTAAAGA+TGG + chr3_2:31031433-31031452 Msa0402640:intron 35.0%
ATGAATTCGGGACTAAAGAT+GGG + chr3_2:31031434-31031453 Msa0402640:intron 35.0%
GTGATGACTTATACTAGCAA+TGG - chr3_2:31031616-31031635 None:intergenic 35.0%
! CTATTTTGCATTCATTGAGG+TGG - chr3_2:31031764-31031783 None:intergenic 35.0%
GCAATTAGGTTTGATGTGTT+TGG - chr3_2:31031791-31031810 None:intergenic 35.0%
TGTTTGCAATATGCATGCTA+TGG + chr3_2:31032055-31032074 Msa0402640:intron 35.0%
GTTTGCAATATGCATGCTAT+GGG + chr3_2:31032056-31032075 Msa0402640:intron 35.0%
!! CCGTTTTTCTTTTAACCTTG+GGG - chr3_2:31032144-31032163 None:intergenic 35.0%
CCCCAAGGTTAAAAGAAAAA+CGG + chr3_2:31032141-31032160 Msa0402640:intron 35.0%
!! CTCCGTTTTTCTTTTAACCT+TGG - chr3_2:31032146-31032165 None:intergenic 35.0%
TCACTGAAAGCAAATTTAGC+AGG - chr3_2:31032263-31032282 None:intergenic 35.0%
TGGCAATGTTAAGCAATAGA+TGG + chr3_2:31032330-31032349 Msa0402640:intron 35.0%
TATGACCTTATCCATGCAAA+TGG + chr3_2:31032485-31032504 Msa0402640:three_prime_UTR 35.0%
AAACACCATTTGCATGGATA+AGG - chr3_2:31032493-31032512 None:intergenic 35.0%
AACTTACGCATTCTTGTACA+AGG - chr3_2:31032519-31032538 None:intergenic 35.0%
CTAAATTGAACCCAATTGCT+AGG + chr3_2:31032713-31032732 Msa0402640:intron 35.0%
ACTAGAGATTCCTAGCAATT+GGG - chr3_2:31032726-31032745 None:intergenic 35.0%
! TTTTGGTCCTCATCTTGATT+AGG + chr3_2:31032754-31032773 Msa0402640:intron 35.0%
AGTAGTTGCATTACACGATT+AGG - chr3_2:31032821-31032840 None:intergenic 35.0%
TCGTGTAATGCAACTACTTT+AGG + chr3_2:31032823-31032842 Msa0402640:intron 35.0%
ATTGATCATTGCCAGAGTTA+GGG - chr3_2:31032853-31032872 None:intergenic 35.0%
GAATTGCAAAAGGAATGAGA+TGG + chr3_2:31032978-31032997 Msa0402640:three_prime_UTR 35.0%
TGGTCCACTTATTTCAGAAA+AGG + chr3_2:31033027-31033046 Msa0402640:three_prime_UTR 35.0%
AGTGATTTCAGCTGACATAA+TGG + chr3_2:31033104-31033123 Msa0402640:three_prime_UTR 35.0%
ACTCAAATCATAGTAGAGCT+TGG + chr3_2:31033289-31033308 Msa0402640:three_prime_UTR 35.0%
AATCATAGTAGAGCTTGGTT+TGG + chr3_2:31033294-31033313 Msa0402640:three_prime_UTR 35.0%
ATCATAGTAGAGCTTGGTTT+GGG + chr3_2:31033295-31033314 Msa0402640:three_prime_UTR 35.0%
! TTCCGTTTCCTCGAACTTTT+CGG + chr3_2:31026944-31026963 Msa0402640:CDS 40.0%
GTGATTGTGCATTGTAGAAG+TGG - chr3_2:31027033-31027052 None:intergenic 40.0%
GGGTCCTATGAAATCATTGA+AGG - chr3_2:31027086-31027105 None:intergenic 40.0%
TAAACAGCGGTTGCAAAGAA+TGG + chr3_2:31027285-31027304 Msa0402640:intron 40.0%
! GAATGTTTTCACAGTATGGC+CGG + chr3_2:31027389-31027408 Msa0402640:intron 40.0%
TTCATAATCATGGCGACGAA+AGG + chr3_2:31027806-31027825 Msa0402640:three_prime_UTR 40.0%
TCATAATCATGGCGACGAAA+GGG + chr3_2:31027807-31027826 Msa0402640:three_prime_UTR 40.0%
ACTTGATCATCCACATCATC+AGG - chr3_2:31028040-31028059 None:intergenic 40.0%
TGATGTGGATGATCAAGTCA+AGG + chr3_2:31028042-31028061 Msa0402640:three_prime_UTR 40.0%
TGCAATTTCTCTTCTTCAGG+AGG - chr3_2:31028175-31028194 None:intergenic 40.0%
CGTAGAATATCCTTTAGGTG+CGG - chr3_2:31028209-31028228 None:intergenic 40.0%
AACGGCGTAGAATATCCTTT+AGG - chr3_2:31028214-31028233 None:intergenic 40.0%
TTGTAAGGCGCATTTGCAAA+CGG - chr3_2:31028265-31028284 None:intergenic 40.0%
!!! AATGTTTTTAGGTTCCCTGG+TGG + chr3_2:31028334-31028353 Msa0402640:three_prime_UTR 40.0%
! ACTGCATTAGATACTGGTTG+TGG + chr3_2:31028439-31028458 Msa0402640:three_prime_UTR 40.0%
! CTGCATTAGATACTGGTTGT+GGG + chr3_2:31028440-31028459 Msa0402640:three_prime_UTR 40.0%
! TGCATTAGATACTGGTTGTG+GGG + chr3_2:31028441-31028460 Msa0402640:three_prime_UTR 40.0%
AATAGCAGCTATAAGCGTAG+TGG - chr3_2:31028603-31028622 None:intergenic 40.0%
TGTTGGTCCTCTATGCATAA+TGG + chr3_2:31028636-31028655 Msa0402640:intron 40.0%
CATGCAACCATTATGCATAG+AGG - chr3_2:31028646-31028665 None:intergenic 40.0%
GTAGCAGCACTTAAGATTGA+AGG + chr3_2:31028720-31028739 Msa0402640:intron 40.0%
! CTTAAGATTGAAGGCATGTC+CGG + chr3_2:31028729-31028748 Msa0402640:intron 40.0%
! AACGCATATCGGTGTGTTTT+TGG - chr3_2:31028764-31028783 None:intergenic 40.0%
GCAGGGTTAAAAGTGGAAAA+TGG - chr3_2:31028955-31028974 None:intergenic 40.0%
!! TTCCTGTCATTGATAATGCC+AGG + chr3_2:31029023-31029042 Msa0402640:intron 40.0%
AACCTGGCATTATCAATGAC+AGG - chr3_2:31029028-31029047 None:intergenic 40.0%
ATAATGCCAGGTTGCTAGTT+GGG + chr3_2:31029035-31029054 Msa0402640:intron 40.0%
TTGCAATGTCAATTGCACCA+AGG + chr3_2:31029085-31029104 Msa0402640:three_prime_UTR 40.0%
TGCAATGTCAATTGCACCAA+GGG + chr3_2:31029086-31029105 Msa0402640:three_prime_UTR 40.0%
! ATTATGCTGCCTTTTCCTTC+TGG + chr3_2:31029180-31029199 Msa0402640:three_prime_UTR 40.0%
TCAAAAGCTCCAGAAGGAAA+AGG - chr3_2:31029192-31029211 None:intergenic 40.0%
AGGCCGAGGAATTAATTAGT+CGG - chr3_2:31029316-31029335 None:intergenic 40.0%
GTTCAAACAAATACGGGTAG+TGG - chr3_2:31029368-31029387 None:intergenic 40.0%
GAGACGGTTCAAACAAATAC+GGG - chr3_2:31029374-31029393 None:intergenic 40.0%
GTCTCTAGACACCTAAGAAT+TGG + chr3_2:31029389-31029408 Msa0402640:intron 40.0%
TTGTTCTTCCAGTTGATTGG+AGG - chr3_2:31029539-31029558 None:intergenic 40.0%
ACACTGCTAAACTTCTTTGC+TGG + chr3_2:31029618-31029637 Msa0402640:three_prime_UTR 40.0%
CACTGCTAAACTTCTTTGCT+GGG + chr3_2:31029619-31029638 Msa0402640:three_prime_UTR 40.0%
TGGGAAAAGAAACACGAGAA+AGG + chr3_2:31029638-31029657 Msa0402640:three_prime_UTR 40.0%
AGAAAGGTGAAATTGCGATC+TGG + chr3_2:31029654-31029673 Msa0402640:three_prime_UTR 40.0%
AACCAGATTCTGTGTCAACA+TGG + chr3_2:31029860-31029879 Msa0402640:intron 40.0%
AGATTCTGTGTCAACATGGA+CGG + chr3_2:31029864-31029883 Msa0402640:intron 40.0%
!! CTTCATATTGAAGGTGTCTC+CGG + chr3_2:31030157-31030176 Msa0402640:intron 40.0%
CCAATGGTCCATAATCCAAA+GGG - chr3_2:31030360-31030379 None:intergenic 40.0%
ACCAATGGTCCATAATCCAA+AGG - chr3_2:31030361-31030380 None:intergenic 40.0%
ATCCACACAGTTATTTGAGG+AGG + chr3_2:31030534-31030553 Msa0402640:three_prime_UTR 40.0%
ACATGTGAATGCTTACAAGC+GGG + chr3_2:31030576-31030595 Msa0402640:three_prime_UTR 40.0%
!! ACAAAATTATTGACTCGGGG+AGG + chr3_2:31030602-31030621 Msa0402640:three_prime_UTR 40.0%
!! AATGTGATGGACATGAATGC+TGG + chr3_2:31030631-31030650 Msa0402640:three_prime_UTR 40.0%
!!! ATGGACATGAATGCTGGTTT+TGG + chr3_2:31030637-31030656 Msa0402640:three_prime_UTR 40.0%
CCATAATTTGGGAGAATCCA+GGG - chr3_2:31030677-31030696 None:intergenic 40.0%
CCTGGATTCTCCCAAATTAT+GGG + chr3_2:31030675-31030694 Msa0402640:three_prime_UTR 40.0%
! ATATTCGAGCGTGGATTGAT+TGG + chr3_2:31030745-31030764 Msa0402640:three_prime_UTR 40.0%
TTCACAGAGGAAAAGCCAAA+AGG - chr3_2:31030823-31030842 None:intergenic 40.0%
ACTTCTCTTTATCCAGCAGA+TGG - chr3_2:31031083-31031102 None:intergenic 40.0%
CTCCTAATCCCAATCAAACA+AGG + chr3_2:31031328-31031347 Msa0402640:intron 40.0%
ATTGCATGTGACTGGAGATA+AGG + chr3_2:31031461-31031480 Msa0402640:intron 40.0%
GATAAGGACATAATGCCTTG+AGG + chr3_2:31031477-31031496 Msa0402640:intron 40.0%
CAACTAACAGTGGCTTATGT+CGG - chr3_2:31031564-31031583 None:intergenic 40.0%
! AACTTTTGCATAGCACTCTG+GGG - chr3_2:31031697-31031716 None:intergenic 40.0%
! GAACTTTTGCATAGCACTCT+GGG - chr3_2:31031698-31031717 None:intergenic 40.0%
! TGAACTTTTGCATAGCACTC+TGG - chr3_2:31031699-31031718 None:intergenic 40.0%
ATCAAACCTAATTGCGGAGA+AGG + chr3_2:31031796-31031815 Msa0402640:intron 40.0%
TCAAACCTAATTGCGGAGAA+GGG + chr3_2:31031797-31031816 Msa0402640:intron 40.0%
! GGGCAATCATCATTTGTTAC+CGG + chr3_2:31032076-31032095 Msa0402640:intron 40.0%
! GGCAATCATCATTTGTTACC+GGG + chr3_2:31032077-31032096 Msa0402640:intron 40.0%
! CATTTGTTACCGGGTATAGA+CGG + chr3_2:31032086-31032105 Msa0402640:intron 40.0%
AAACATCTACCGTCTATACC+CGG - chr3_2:31032098-31032117 None:intergenic 40.0%
GTCATAAGTCCTTGGATATG+TGG - chr3_2:31032471-31032490 None:intergenic 40.0%
TGGATAAGGTCATAAGTCCT+TGG - chr3_2:31032479-31032498 None:intergenic 40.0%
AGGTGAAAACACCATTTGCA+TGG - chr3_2:31032499-31032518 None:intergenic 40.0%
TGCTTAGACATGTACAAGCT+AGG - chr3_2:31032557-31032576 None:intergenic 40.0%
CACTAGAGATTCCTAGCAAT+TGG - chr3_2:31032727-31032746 None:intergenic 40.0%
AGACGAGATTTATCACAGTG+AGG - chr3_2:31032780-31032799 None:intergenic 40.0%
!! CTTTAGGTTTTCCCTAACTC+TGG + chr3_2:31032839-31032858 Msa0402640:intron 40.0%
CATTGATCATTGCCAGAGTT+AGG - chr3_2:31032854-31032873 None:intergenic 40.0%
GTTATATTCCGAGATCAGGT+TGG + chr3_2:31032935-31032954 Msa0402640:three_prime_UTR 40.0%
GAGATGGAATACCAAAATGG+TGG + chr3_2:31032994-31033013 Msa0402640:three_prime_UTR 40.0%
CTGAAATCACTATGAGCTTG+TGG - chr3_2:31033095-31033114 None:intergenic 40.0%
CTCCGAAAAGTTCGAGGAAA+CGG - chr3_2:31026949-31026968 None:intergenic 45.0%
! GCAACCGCTGTTTAAAACCT+CGG - chr3_2:31027279-31027298 None:intergenic 45.0%
TGCCTCCTCAACCACAATTT+GGG - chr3_2:31027449-31027468 None:intergenic 45.0%
ATGCCTCCTCAACCACAATT+TGG - chr3_2:31027450-31027469 None:intergenic 45.0%
TTAGGTTTGTGGCAAAGGAG+TGG + chr3_2:31027908-31027927 Msa0402640:three_prime_UTR 45.0%
TTGTGGCAAAGGAGTGGTTT+CGG + chr3_2:31027914-31027933 Msa0402640:three_prime_UTR 45.0%
CAAAGGAGTGGTTTCGGAAA+AGG + chr3_2:31027920-31027939 Msa0402640:three_prime_UTR 45.0%
! ACTCACCATGATAATGACGC+TGG + chr3_2:31028010-31028029 Msa0402640:three_prime_UTR 45.0%
TCGATGTAGCTATCGTCACA+AGG - chr3_2:31028076-31028095 None:intergenic 45.0%
TCATTGCTCTCGCTTGATCA+TGG - chr3_2:31028111-31028130 None:intergenic 45.0%
GATATTCTACGCCGTTTCCT+TGG + chr3_2:31028218-31028237 Msa0402640:three_prime_UTR 45.0%
TAATCACGACTCTTAGGCCA+AGG - chr3_2:31028238-31028257 None:intergenic 45.0%
GGCACATAATCACGACTCTT+AGG - chr3_2:31028244-31028263 None:intergenic 45.0%
TCAACCGTCAGACTCTTGTA+AGG - chr3_2:31028280-31028299 None:intergenic 45.0%
TTGAGAAGGCTGTGCAGAAT+TGG + chr3_2:31028296-31028315 Msa0402640:three_prime_UTR 45.0%
!!! GGGAATGTTTTTAGGTTCCC+TGG + chr3_2:31028331-31028350 Msa0402640:three_prime_UTR 45.0%
GTTGGCAGCGTTGTCAATTA+TGG + chr3_2:31028518-31028537 Msa0402640:intron 45.0%
!!! GTGTTTTTGGTGTCAGACAC+CGG - chr3_2:31028751-31028770 None:intergenic 45.0%
AGAAGCCTTGACATCAGACA+GGG - chr3_2:31028848-31028867 None:intergenic 45.0%
AAGAAGCCTTGACATCAGAC+AGG - chr3_2:31028849-31028868 None:intergenic 45.0%
GATAATGCCAGGTTGCTAGT+TGG + chr3_2:31029034-31029053 Msa0402640:intron 45.0%
TAATGCCAGGTTGCTAGTTG+GGG + chr3_2:31029036-31029055 Msa0402640:intron 45.0%
!! AGAGGTGTTCCTGCAATCAT+TGG + chr3_2:31029144-31029163 Msa0402640:three_prime_UTR 45.0%
CCAAGAACACCAATGATTGC+AGG - chr3_2:31029156-31029175 None:intergenic 45.0%
! CCTGCAATCATTGGTGTTCT+TGG + chr3_2:31029153-31029172 Msa0402640:three_prime_UTR 45.0%
!!! TCCTTCTGGAGCTTTTGACA+TGG + chr3_2:31029194-31029213 Msa0402640:three_prime_UTR 45.0%
TTCTCGCTGCTTGATTCCAT+GGG + chr3_2:31029224-31029243 Msa0402640:three_prime_UTR 45.0%
TTGATTCCATGGGGTGCAAA+CGG + chr3_2:31029234-31029253 Msa0402640:three_prime_UTR 45.0%
! ATCGTTTTATAACGAGGCCG+AGG - chr3_2:31029330-31029349 None:intergenic 45.0%
! GGGTAGTGGTCTAAAGCTTA+TGG - chr3_2:31029354-31029373 None:intergenic 45.0%
!! CTCAGGTGGATTGTACATGA+AGG + chr3_2:31029466-31029485 Msa0402640:intron 45.0%
AACCACCAGGTCTAAGAACT+CGG - chr3_2:31029499-31029518 None:intergenic 45.0%
TTCTTAGACCTGGTGGTTAC+TGG + chr3_2:31029501-31029520 Msa0402640:three_prime_UTR 45.0%
!! GAAAGTATCCAGTAACCACC+AGG - chr3_2:31029512-31029531 None:intergenic 45.0%
GGTGGTTACTGGATACTTTC+TGG + chr3_2:31029512-31029531 Msa0402640:three_prime_UTR 45.0%
! TTTCTGGTCCTCCAATCAAC+TGG + chr3_2:31029528-31029547 Msa0402640:three_prime_UTR 45.0%
CAGCAAATTCCGATGATGTC+TGG + chr3_2:31029738-31029757 Msa0402640:three_prime_UTR 45.0%
GTCCATGTTGACACAGAATC+TGG - chr3_2:31029865-31029884 None:intergenic 45.0%
! TGGCATGTTTCTACCGTAAG+TGG + chr3_2:31029967-31029986 Msa0402640:intron 45.0%
AGGTTGGGACTAACCACTTA+CGG - chr3_2:31029983-31030002 None:intergenic 45.0%
CCGAACTTGCGAAATAGGTT+GGG - chr3_2:31029998-31030017 None:intergenic 45.0%
CCCAACCTATTTCGCAAGTT+CGG + chr3_2:31029995-31030014 Msa0402640:intron 45.0%
ACCGAACTTGCGAAATAGGT+TGG - chr3_2:31029999-31030018 None:intergenic 45.0%
TCGCAAGTTCGGTTATTGGA+AGG + chr3_2:31030006-31030025 Msa0402640:intron 45.0%
! GCACCGACACTTCATATTGA+AGG + chr3_2:31030148-31030167 Msa0402640:intron 45.0%
TGTCTGACATGCTCATACAC+CGG - chr3_2:31030179-31030198 None:intergenic 45.0%
AATTATTGCCAGTGTAGGCG+TGG + chr3_2:31030238-31030257 Msa0402640:intron 45.0%
GTCCATAATCCAAAGGGTAG+GGG - chr3_2:31030354-31030373 None:intergenic 45.0%
GGTCCATAATCCAAAGGGTA+GGG - chr3_2:31030355-31030374 None:intergenic 45.0%
TGGTCCATAATCCAAAGGGT+AGG - chr3_2:31030356-31030375 None:intergenic 45.0%
CCCTTTGGATTATGGACCAT+TGG + chr3_2:31030357-31030376 Msa0402640:intron 45.0%
GTAACTCCTGCTAAACCTAG+TGG + chr3_2:31030439-31030458 Msa0402640:three_prime_UTR 45.0%
GAACAACATTGAGTCTCTCC+GGG - chr3_2:31030480-31030499 None:intergenic 45.0%
GGAACAACATTGAGTCTCTC+CGG - chr3_2:31030481-31030500 None:intergenic 45.0%
AACAGATCCACTGGTGATTC+TGG - chr3_2:31030506-31030525 None:intergenic 45.0%
TACATGAGGAACAGATCCAC+TGG - chr3_2:31030515-31030534 None:intergenic 45.0%
GTCCTCCTCAAATAACTGTG+TGG - chr3_2:31030539-31030558 None:intergenic 45.0%
TTGAGGAGGACAACCGATTA+TGG + chr3_2:31030548-31030567 Msa0402640:three_prime_UTR 45.0%
CCCTGGATTCTCCCAAATTA+TGG + chr3_2:31030674-31030693 Msa0402640:three_prime_UTR 45.0%
CCCATAATTTGGGAGAATCC+AGG - chr3_2:31030678-31030697 None:intergenic 45.0%
GTAGCTTTCTCAGCAATCGT+AGG - chr3_2:31030715-31030734 None:intergenic 45.0%
ATTGCTGAGAAAGCTACCCT+TGG + chr3_2:31030718-31030737 Msa0402640:three_prime_UTR 45.0%
ACGCTCGAATATAACGCCAA+GGG - chr3_2:31030737-31030756 None:intergenic 45.0%
TGGGATGAATTGCATGTGAC+TGG + chr3_2:31031453-31031472 Msa0402640:intron 45.0%
ATGCCTTGAGGAGAGTTACA+CGG + chr3_2:31031489-31031508 Msa0402640:intron 45.0%
CGACATAAGCCACTGTTAGT+TGG + chr3_2:31031562-31031581 Msa0402640:intron 45.0%
ACACAGAAGCCAACTAACAG+TGG - chr3_2:31031574-31031593 None:intergenic 45.0%
CAAACCTAATTGCGGAGAAG+GGG + chr3_2:31031798-31031817 Msa0402640:intron 45.0%
TGATACAGCTCAAGACACGA+CGG + chr3_2:31031868-31031887 Msa0402640:intron 45.0%
GGATAAAGCATACAACCCCA+AGG + chr3_2:31032126-31032145 Msa0402640:intron 45.0%
AAGCCTTCTCCACATATCCA+AGG + chr3_2:31032459-31032478 Msa0402640:three_prime_UTR 45.0%
AGTCCTTGGATATGTGGAGA+AGG - chr3_2:31032465-31032484 None:intergenic 45.0%
AGACACTGCAGTAGAAACCA+TGG + chr3_2:31032647-31032666 Msa0402640:intron 45.0%
AGTGAGGCCTAATCAAGATG+AGG - chr3_2:31032764-31032783 None:intergenic 45.0%
ACTCTGGCAATGATCAATGC+AGG + chr3_2:31032855-31032874 Msa0402640:intron 45.0%
TGGAGATGGACCGTATCTTA+CGG + chr3_2:31032900-31032919 Msa0402640:three_prime_UTR 45.0%
AGCGGTTATATTCCGAGATC+AGG + chr3_2:31032931-31032950 Msa0402640:three_prime_UTR 45.0%
!! TACCAAAATGGTGGATCACG+AGG + chr3_2:31033003-31033022 Msa0402640:three_prime_UTR 45.0%
! ATCCTCGTGATCCACCATTT+TGG - chr3_2:31033008-31033027 None:intergenic 45.0%
!! AAAATGGTGGATCACGAGGA+TGG + chr3_2:31033007-31033026 Msa0402640:three_prime_UTR 45.0%
!! TATACAATTTAATATTAATT+AGG - chr3_2:31029922-31029941 None:intergenic 5.0%
ATGGGTCTCCGAAAAGTTCG+AGG - chr3_2:31026955-31026974 None:intergenic 50.0%
GTTGCGTTGTGATGAAGGTG+GGG - chr3_2:31027106-31027125 None:intergenic 50.0%
CGTTGCGTTGTGATGAAGGT+GGG - chr3_2:31027107-31027126 None:intergenic 50.0%
GTTGCGTTGCGTTGTGATGA+AGG - chr3_2:31027111-31027130 None:intergenic 50.0%
GACAGATACGGCCTCAATTG+TGG + chr3_2:31027319-31027338 Msa0402640:intron 50.0%
GCCTCCTCAACCACAATTTG+GGG - chr3_2:31027448-31027467 None:intergenic 50.0%
GCGTTCCAGCGTCATTATCA+TGG - chr3_2:31028018-31028037 None:intergenic 50.0%
TGTCTCATAGCCGCACCTAA+AGG + chr3_2:31028196-31028215 Msa0402640:three_prime_UTR 50.0%
CGACTCTTAGGCCAAGGAAA+CGG - chr3_2:31028232-31028251 None:intergenic 50.0%
TGCGCCTTACAAGAGTCTGA+CGG + chr3_2:31028273-31028292 Msa0402640:three_prime_UTR 50.0%
CAAGAGTCTGACGGTTGAGA+AGG + chr3_2:31028282-31028301 Msa0402640:three_prime_UTR 50.0%
!!! GTTTTTAGGTTCCCTGGTGG+TGG + chr3_2:31028337-31028356 Msa0402640:three_prime_UTR 50.0%
GAAACTGAGTTCCACCACCA+GGG - chr3_2:31028351-31028370 None:intergenic 50.0%
TGGTGGAACTCAGTTTCCTC+AGG + chr3_2:31028354-31028373 Msa0402640:three_prime_UTR 50.0%
GGTGGAACTCAGTTTCCTCA+GGG + chr3_2:31028355-31028374 Msa0402640:three_prime_UTR 50.0%
ATGTAAGCATCAGCACCCTG+AGG - chr3_2:31028373-31028392 None:intergenic 50.0%
GAAGCCTTGACATCAGACAG+GGG - chr3_2:31028847-31028866 None:intergenic 50.0%
CACACACGCAGGGTTAAAAG+TGG - chr3_2:31028962-31028981 None:intergenic 50.0%
TGTGCTTCATGAGAGTCCCT+TGG - chr3_2:31029105-31029124 None:intergenic 50.0%
GCCATGTCAAAAGCTCCAGA+AGG - chr3_2:31029198-31029217 None:intergenic 50.0%
GTTCTCGCTGCTTGATTCCA+TGG + chr3_2:31029223-31029242 Msa0402640:three_prime_UTR 50.0%
TCTCGCTGCTTGATTCCATG+GGG + chr3_2:31029225-31029244 Msa0402640:three_prime_UTR 50.0%
GTTGACCGAGTTCTTAGACC+TGG + chr3_2:31029491-31029510 Msa0402640:three_prime_UTR 50.0%
ACGTCCTGAAGATGAGCTTG+AGG + chr3_2:31029574-31029593 Msa0402640:three_prime_UTR 50.0%
TCCTGAAGATGAGCTTGAGG+AGG + chr3_2:31029577-31029596 Msa0402640:three_prime_UTR 50.0%
TCCTCCTCAAGCTCATCTTC+AGG - chr3_2:31029581-31029600 None:intergenic 50.0%
ATGAGCTTGAGGAGGAGCAA+AGG + chr3_2:31029585-31029604 Msa0402640:three_prime_UTR 50.0%
ATGTCAGACACTGACACACG+TGG + chr3_2:31030189-31030208 Msa0402640:intron 50.0%
AGCCCCTACCCTTTGGATTA+TGG + chr3_2:31030349-31030368 Msa0402640:intron 50.0%
CATGCACCACTAGGTTTAGC+AGG - chr3_2:31030448-31030467 None:intergenic 50.0%
CTGCTAAACCTAGTGGTGCA+TGG + chr3_2:31030446-31030465 Msa0402640:three_prime_UTR 50.0%
AATGGCTTCCATGCACCACT+AGG - chr3_2:31030457-31030476 None:intergenic 50.0%
ACATTGAGTCTCTCCGGGAA+TGG - chr3_2:31030475-31030494 None:intergenic 50.0%
GTTCCTACCAGAATCACCAG+TGG + chr3_2:31030496-31030515 Msa0402640:three_prime_UTR 50.0%
GATCCACTGGTGATTCTGGT+AGG - chr3_2:31030502-31030521 None:intergenic 50.0%
CACGCTCGAATATAACGCCA+AGG - chr3_2:31030738-31030757 None:intergenic 50.0%
CTTGGCGTTATATTCGAGCG+TGG + chr3_2:31030736-31030755 Msa0402640:three_prime_UTR 50.0%
! TACTGGTGATGACCATCTGC+TGG + chr3_2:31031068-31031087 Msa0402640:intron 50.0%
CTCCTTCAGGCCGTAAGATA+CGG - chr3_2:31032913-31032932 None:intergenic 50.0%
TATCTTACGGCCTGAAGGAG+CGG + chr3_2:31032913-31032932 Msa0402640:three_prime_UTR 50.0%
CGGAATATAACCGCTCCTTC+AGG - chr3_2:31032926-31032945 None:intergenic 50.0%
TCAGCACACCAACCTGATCT+CGG - chr3_2:31032946-31032965 None:intergenic 50.0%
! AGGTCTTGTATGCCGTCAAG+CGG + chr3_2:31033047-31033066 Msa0402640:three_prime_UTR 50.0%
GCGTTGCGTTGTGATGAAGG+TGG - chr3_2:31027108-31027127 None:intergenic 55.0%
CACAACGCAACGCAACGCAA+CGG + chr3_2:31027115-31027134 Msa0402640:CDS 55.0%
TGACAAGGCGGCCACAATTG+AGG - chr3_2:31027333-31027352 None:intergenic 55.0%
ATGAACGCGGCCCCAAATTG+TGG + chr3_2:31027435-31027454 Msa0402640:intron 55.0%
GCCCCAAATTGTGGTTGAGG+AGG + chr3_2:31027444-31027463 Msa0402640:intron 55.0%
ATGGACGCAGCCCTAAGTTG+TGG + chr3_2:31027626-31027645 Msa0402640:intron 55.0%
GCAGCCCTAAGTTGTGGTTG+CGG + chr3_2:31027632-31027651 Msa0402640:intron 55.0%
GCCACCGCAACCACAACTTA+GGG - chr3_2:31027639-31027658 None:intergenic 55.0%
TGCCACCGCAACCACAACTT+AGG - chr3_2:31027640-31027659 None:intergenic 55.0%
GCTCTCGCTTGATCATGGCA+GGG - chr3_2:31028106-31028125 None:intergenic 55.0%
TGCTCTCGCTTGATCATGGC+AGG - chr3_2:31028107-31028126 None:intergenic 55.0%
GGAAACTGAGTTCCACCACC+AGG - chr3_2:31028352-31028371 None:intergenic 55.0%
TTGCTCATCTTGAGCAGCCC+TGG + chr3_2:31028676-31028695 Msa0402640:intron 55.0%
CTTGACATCAGACAGGGGCA+CGG - chr3_2:31028842-31028861 None:intergenic 55.0%
GCTACATGCACACACACGCA+GGG - chr3_2:31028972-31028991 None:intergenic 55.0%
AGCTACATGCACACACACGC+AGG - chr3_2:31028973-31028992 None:intergenic 55.0%
ATGCTCCCCAACTAGCAACC+TGG - chr3_2:31029044-31029063 None:intergenic 55.0%
TTCTCACCGTTTGCACCCCA+TGG - chr3_2:31029243-31029262 None:intergenic 55.0%
GACCGAGTTCTTAGACCTGG+TGG + chr3_2:31029494-31029513 Msa0402640:three_prime_UTR 55.0%
GGAAGAACAACTACCGAGCG+TGG + chr3_2:31029549-31029568 Msa0402640:three_prime_UTR 55.0%
TGGTGCATGGAAGCCATTCC+CGG + chr3_2:31030459-31030478 Msa0402640:three_prime_UTR 55.0%
!! GGGGAGGTATCGCAATGTGA+TGG + chr3_2:31030618-31030637 Msa0402640:three_prime_UTR 55.0%
! TGGAAGTTTTGCTGCTGCCC+TGG + chr3_2:31030657-31030676 Msa0402640:three_prime_UTR 55.0%
TGGCCGTGTAACTCTCCTCA+AGG - chr3_2:31031495-31031514 None:intergenic 55.0%
CCTTCCCCTTCTCCGCAATT+AGG - chr3_2:31031805-31031824 None:intergenic 55.0%
CCTAATTGCGGAGAAGGGGA+AGG + chr3_2:31031802-31031821 Msa0402640:intron 55.0%
GTGGAGAAGGCTTCACACCT+GGG - chr3_2:31032452-31032471 None:intergenic 55.0%
TGTGGAGAAGGCTTCACACC+TGG - chr3_2:31032453-31032472 None:intergenic 55.0%
GACCGTATCTTACGGCCTGA+AGG + chr3_2:31032908-31032927 Msa0402640:three_prime_UTR 55.0%
TGTATGCCGTCAAGCGGTAC+TGG + chr3_2:31033053-31033072 Msa0402640:three_prime_UTR 55.0%
GTATGCCGTCAAGCGGTACT+GGG + chr3_2:31033054-31033073 Msa0402640:three_prime_UTR 55.0%
TGCAACCCAGTACCGCTTGA+CGG - chr3_2:31033062-31033081 None:intergenic 55.0%
GCGGCCCCAAATTGTGGTTG+AGG + chr3_2:31027441-31027460 Msa0402640:intron 60.0%
GCCCTAAGTTGTGGTTGCGG+TGG + chr3_2:31027635-31027654 Msa0402640:intron 60.0%
ATGGCGACGAAAGGGAACCC+TGG + chr3_2:31027815-31027834 Msa0402640:three_prime_UTR 60.0%
! CGCTGGAACGCCTGATGATG+TGG + chr3_2:31028027-31028046 Msa0402640:three_prime_UTR 60.0%
CGTGCCCCTGTCTGATGTCA+AGG + chr3_2:31028840-31028859 Msa0402640:intron 60.0%
CTTCAGGACGTTGCCACGCT+CGG - chr3_2:31029565-31029584 None:intergenic 60.0%
CAACACTGCCACGCCTACAC+TGG - chr3_2:31030249-31030268 None:intergenic 60.0%
ACTGTGCAGCCCCTACCCTT+TGG + chr3_2:31030342-31030361 Msa0402640:intron 60.0%
! GTCAAGCGGTACTGGGTTGC+AGG + chr3_2:31033061-31033080 Msa0402640:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 31026929 31033393 31026929 ID=Msa0402640;Name=Msa0402640
chr3_2 mRNA 31026929 31033393 31026929 ID=Msa0402640-mRNA-1;Parent=Msa0402640;Name=Msa0402640-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.83|0.85|1|0.83|0.71|7|2144|72
chr3_2 exon 31026929 31027136 31026929 ID=Msa0402640-mRNA-1:exon:6204;Parent=Msa0402640-mRNA-1
chr3_2 exon 31027769 31028462 31027769 ID=Msa0402640-mRNA-1:exon:6205;Parent=Msa0402640-mRNA-1
chr3_2 exon 31029045 31029255 31029045 ID=Msa0402640-mRNA-1:exon:6206;Parent=Msa0402640-mRNA-1
chr3_2 exon 31029471 31029759 31029471 ID=Msa0402640-mRNA-1:exon:6207;Parent=Msa0402640-mRNA-1
chr3_2 exon 31030417 31030782 31030417 ID=Msa0402640-mRNA-1:exon:6208;Parent=Msa0402640-mRNA-1
chr3_2 exon 31032454 31032531 31032454 ID=Msa0402640-mRNA-1:exon:6209;Parent=Msa0402640-mRNA-1
chr3_2 exon 31032877 31033393 31032877 ID=Msa0402640-mRNA-1:exon:6210;Parent=Msa0402640-mRNA-1
chr3_2 CDS 31026929 31027136 31026929 ID=Msa0402640-mRNA-1:cds;Parent=Msa0402640-mRNA-1
chr3_2 CDS 31027769 31027779 31027769 ID=Msa0402640-mRNA-1:cds;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31027780 31028462 31027780 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31029045 31029255 31029045 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31029471 31029759 31029471 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31030417 31030782 31030417 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31032454 31032531 31032454 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
chr3_2 three_prime_UTR 31032877 31033393 31032877 ID=Msa0402640-mRNA-1:three_prime_utr;Parent=Msa0402640-mRNA-1
Gene Sequence

>Msa0402640

ATGAGTGAAGCAGAATTCCGTTTCCTCGAACTTTTCGGAGACCCATATGTGAATGAGAGACACAAACAAACAGAAAAAAACAAAACACCCGTTCTTTCATTCCACTTCTACAATGCACAATCACAAACTATTATCAATCTCACAATCCTTCCTTCCTTCAATGATTTCATAGGACCCCACCTTCATCACAACGCAACGCAACGCAACGGGATTTTATAA
Protein sequence

>Msa0402640

MSEAEFRFLELFGDPYVNERHKQTEKNKTPVLSFHFYNAQSQTIINLTILPSFNDFIGPHLHHNATQRNGIL*