AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0539900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539900 MtrunA17_Chr4g0014921 94.718 284 15 0 1 284 1 284 0.0 549
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539900 AT1G72030.1 47.244 254 111 6 30 276 19 256 5.15e-62 197

Find 62 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAGTACCTTTACATTTC+AGG 0.210309 4_1:+21251320 Msa0539900:CDS
TAGCTGTCTCCAATGCTTTC+AGG 0.223097 4_1:+21251345 Msa0539900:CDS
ATCCACCATGGACAAGTAAT+TGG 0.234201 4_1:+21251771 Msa0539900:CDS
TAACATGCTTATGAGAAATA+TGG 0.235332 4_1:-21250086 None:intergenic
TTTGTTCTTTCAATTCTTTA+AGG 0.237732 4_1:+21250437 Msa0539900:CDS
AATTAATAATCTACTTGATT+AGG 0.248290 4_1:-21251842 None:intergenic
TAGAGCCTATGAAGAAGATT+TGG 0.287218 4_1:+21251700 Msa0539900:CDS
AAATAGGCTGAAGTGCTTTC+AGG 0.312360 4_1:+21250966 Msa0539900:intron
AAACTCATTACCCCACAAAT+TGG 0.313360 4_1:-21251669 None:intergenic
GATTAGTCTGCTTATATAGA+AGG 0.318197 4_1:+21252384 Msa0539900:three_prime_UTR
ATTATTTAGGTATGCTTGTT+TGG 0.327298 4_1:+21251196 Msa0539900:intron
AATCTTCTTCATAGGCTCTA+AGG 0.371477 4_1:-21251697 None:intergenic
TGAAAATATGAAGCAAAAGT+TGG 0.383459 4_1:+21250293 Msa0539900:CDS
GTTAACTCAGTTTCTACAAT+TGG 0.383586 4_1:-21249979 None:intergenic
AACATGCTTATGAGAAATAT+GGG 0.394470 4_1:-21250085 None:intergenic
TAACAACAAATGTACCTATC+AGG 0.398497 4_1:-21251017 None:intergenic
AGAGCCTATGAAGAAGATTT+GGG 0.427743 4_1:+21251701 Msa0539900:CDS
AGCACCCAAATCTTCTTCAT+AGG 0.429328 4_1:-21251705 None:intergenic
GTGAATATGGATGGAGGATA+AGG 0.442867 4_1:+21250328 Msa0539900:CDS
TAAAGACAGAATATTAGAAA+TGG 0.443325 4_1:+21251884 Msa0539900:three_prime_UTR
AGGTACTCTTGTGCTTCAGC+AGG 0.452395 4_1:-21251308 None:intergenic
ATAACACCTACAAGTTCCTT+TGG 0.452679 4_1:-21251242 None:intergenic
AAGCATGTTATATGTTCAAA+TGG 0.456260 4_1:+21250099 Msa0539900:CDS
TATTTCAGTGTCATCGATCA+TGG 0.462464 4_1:+21251997 Msa0539900:three_prime_UTR
TTAAATACTCACCTCCTGAT+AGG 0.463612 4_1:+21251003 Msa0539900:CDS
AGTTAACATTAACAAACTAT+AGG 0.469382 4_1:+21249995 Msa0539900:five_prime_UTR
GTGACATAATATCCAATTTG+TGG 0.473968 4_1:+21251657 Msa0539900:CDS
TCCACCATGGACAAGTAATT+GGG 0.475166 4_1:+21251772 Msa0539900:CDS
GATTCACCAAAGGAACTTGT+AGG 0.478737 4_1:+21251236 Msa0539900:CDS
TGACATAATATCCAATTTGT+GGG 0.486196 4_1:+21251658 Msa0539900:CDS
CTGACGAACACACTGTTCTA+CGG 0.487124 4_1:-21252482 None:intergenic
TGCTGATCAGAAAGTGATGT+TGG 0.505427 4_1:+21250254 Msa0539900:CDS
AATACCAAAATAAAATCAAA+AGG 0.507069 4_1:+21249942 Msa0539900:five_prime_UTR
AAATCATTGAAAAGAGCTAC+AGG 0.509660 4_1:-21250417 None:intergenic
CGAACATTGTACACAAATGC+TGG 0.511040 4_1:+21251728 Msa0539900:CDS
GGAGATGTTCAAGCACATCT+TGG 0.525750 4_1:-21251286 None:intergenic
ATTTAGGTATGCTTGTTTGG+TGG 0.529125 4_1:+21251199 Msa0539900:intron
ACAATCAAAGAAAGAGCTCA+AGG 0.531195 4_1:+21252446 Msa0539900:three_prime_UTR
GTGGATCTTTAGAAACAAGT+TGG 0.539203 4_1:-21251754 None:intergenic
CCAACCCAATTACTTGTCCA+TGG 0.539516 4_1:-21251776 None:intergenic
CAGCTATGCCTGAAATGTAA+AGG 0.545482 4_1:-21251328 None:intergenic
ATCTATGAGAGGATTTAAAG+TGG 0.568996 4_1:-21249908 None:intergenic
ATGTTATATGTTCAAATGGA+AGG 0.574934 4_1:+21250103 Msa0539900:CDS
CCATGGACAAGTAATTGGGT+TGG 0.581303 4_1:+21251776 Msa0539900:CDS
CAATCAAAGAAAGAGCTCAA+GGG 0.589242 4_1:+21252447 Msa0539900:three_prime_UTR
CATGAGAGAAGTGCGATCTG+AGG 0.595779 4_1:+21252410 Msa0539900:three_prime_UTR
GTTATCTTAAAATCTATGAG+AGG 0.595864 4_1:-21249919 None:intergenic
TCGTCAGAGAAACATGAAAG+AGG 0.598765 4_1:+21252498 Msa0539900:three_prime_UTR
TGGTGTGTGAATATGGATGG+AGG 0.600815 4_1:+21250322 Msa0539900:CDS
GGTACTCTTGTGCTTCAGCA+GGG 0.601704 4_1:-21251307 None:intergenic
CGTCAGAGAAACATGAAAGA+GGG 0.613357 4_1:+21252499 Msa0539900:three_prime_UTR
GAAAGAGGGAGGAGTGTCGT+AGG 0.618431 4_1:+21252513 Msa0539900:three_prime_UTR
ACATGCTTATGAGAAATATG+GGG 0.619066 4_1:-21250084 None:intergenic
TCTATGAGAGGATTTAAAGT+GGG 0.627506 4_1:-21249907 None:intergenic
CAGAGAAACATGAAAGAGGG+AGG 0.629733 4_1:+21252502 Msa0539900:three_prime_UTR
AGAAGGAAAAGACGATTGCA+AGG 0.649224 4_1:-21252335 None:intergenic
ACCCAATTACTTGTCCATGG+TGG 0.661718 4_1:-21251773 None:intergenic
TTGTTTCTAAAGATCCACCA+TGG 0.675137 4_1:+21251759 Msa0539900:CDS
CAACAAATGTACCTATCAGG+AGG 0.675327 4_1:-21251014 None:intergenic
CATGCTTATGAGAAATATGG+GGG 0.677909 4_1:-21250083 None:intergenic
GAATGATCAAGATTCACCAA+AGG 0.679618 4_1:+21251226 Msa0539900:CDS
GACATAATATCCAATTTGTG+GGG 0.680586 4_1:+21251659 Msa0539900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAATAATAATTATTTT+AGG - chr4_1:21251095-21251114 None:intergenic 0.0%
!!! GTCAAAATTTATTATTTTAA+AGG - chr4_1:21250879-21250898 None:intergenic 10.0%
!! AATACCAAAATAAAATCAAA+AGG + chr4_1:21249942-21249961 Msa0539900:five_prime_UTR 15.0%
!! ATCATTTATCAATATGAAAT+TGG + chr4_1:21251066-21251085 Msa0539900:intron 15.0%
!! TAATGTATATGCTATTATTT+AGG + chr4_1:21251183-21251202 Msa0539900:intron 15.0%
!!! ATATTCAAGGATTTTTAAAT+AGG + chr4_1:21251403-21251422 Msa0539900:intron 15.0%
!! AATTAATAATCTACTTGATT+AGG - chr4_1:21251845-21251864 None:intergenic 15.0%
!!! TACAATTGGTATTTGATTTT+AGG - chr4_1:21249968-21249987 None:intergenic 20.0%
!! AGTTAACATTAACAAACTAT+AGG + chr4_1:21249995-21250014 Msa0539900:five_prime_UTR 20.0%
!! ACTAAAAAAATGGTAACTTT+AGG - chr4_1:21250034-21250053 None:intergenic 20.0%
!! CCATTCATAAACTAAAAAAA+TGG - chr4_1:21250044-21250063 None:intergenic 20.0%
!!! CCATTTTTTTAGTTTATGAA+TGG + chr4_1:21250041-21250060 Msa0539900:exon 20.0%
!! TAAGAAGAAAAAGAAAAACT+TGG + chr4_1:21250169-21250188 Msa0539900:CDS 20.0%
!! TTTGTTCTTTCAATTCTTTA+AGG + chr4_1:21250437-21250456 Msa0539900:CDS 20.0%
!! TGTATTATATATGTGAAAGT+CGG - chr4_1:21250729-21250748 None:intergenic 20.0%
!! AACATTAAACAACCATTTAA+AGG - chr4_1:21250929-21250948 None:intergenic 20.0%
!! TAAAGACAGAATATTAGAAA+TGG + chr4_1:21251884-21251903 Msa0539900:three_prime_UTR 20.0%
!!! TTATATTCTTTAGAAGCATA+TGG - chr4_1:21252262-21252281 None:intergenic 20.0%
!! TCTAAAGAATATAAAACACA+TGG + chr4_1:21252268-21252287 Msa0539900:intron 20.0%
! GTTATCTTAAAATCTATGAG+AGG - chr4_1:21249922-21249941 None:intergenic 25.0%
!!! TAGGCCTTTTGATTTTATTT+TGG - chr4_1:21249949-21249968 None:intergenic 25.0%
! AACATGCTTATGAGAAATAT+GGG - chr4_1:21250088-21250107 None:intergenic 25.0%
! TAACATGCTTATGAGAAATA+TGG - chr4_1:21250089-21250108 None:intergenic 25.0%
! AAGCATGTTATATGTTCAAA+TGG + chr4_1:21250099-21250118 Msa0539900:CDS 25.0%
! ATGTTATATGTTCAAATGGA+AGG + chr4_1:21250103-21250122 Msa0539900:CDS 25.0%
!!! ATTCTATAGCATGCATTTTT+TGG - chr4_1:21250150-21250169 None:intergenic 25.0%
! TGAAAATATGAAGCAAAAGT+TGG + chr4_1:21250293-21250312 Msa0539900:CDS 25.0%
! TCTCTACTTATTGTCTTAAA+AGG - chr4_1:21250690-21250709 None:intergenic 25.0%
! ATTTAAAGGCAAATAAAGTG+TGG - chr4_1:21250915-21250934 None:intergenic 25.0%
!! ACACTTTATTTGCCTTTAAA+TGG + chr4_1:21250914-21250933 Msa0539900:intron 25.0%
! CAATTTATTATCTCATGCTA+AGG - chr4_1:21251140-21251159 None:intergenic 25.0%
! ATTATTTAGGTATGCTTGTT+TGG + chr4_1:21251196-21251215 Msa0539900:intron 25.0%
!!! TTACATCTCTGAAATATTCA+AGG + chr4_1:21251390-21251409 Msa0539900:intron 25.0%
! ATGTTAATGAGACTAATTGA+TGG + chr4_1:21251594-21251613 Msa0539900:intron 25.0%
! TGACATAATATCCAATTTGT+GGG + chr4_1:21251658-21251677 Msa0539900:CDS 25.0%
!!! TGTTCAAATCTTTTTGAAGA+CGG + chr4_1:21252039-21252058 Msa0539900:intron 25.0%
!!! TATATGCTTCATGTTTTGAA+TGG - chr4_1:21252134-21252153 None:intergenic 25.0%
!!! CTATGTTTTGAATTTTTTCC+TGG - chr4_1:21252158-21252177 None:intergenic 25.0%
! TCTATGAGAGGATTTAAAGT+GGG - chr4_1:21249910-21249929 None:intergenic 30.0%
ATCTATGAGAGGATTTAAAG+TGG - chr4_1:21249911-21249930 None:intergenic 30.0%
GTTAACTCAGTTTCTACAAT+TGG - chr4_1:21249982-21250001 None:intergenic 30.0%
ACATGCTTATGAGAAATATG+GGG - chr4_1:21250087-21250106 None:intergenic 30.0%
AGAAAAAGAAAAACTTGGAG+TGG + chr4_1:21250174-21250193 Msa0539900:CDS 30.0%
!!! GAAGCAAAAGTTGGATTTTT+TGG + chr4_1:21250302-21250321 Msa0539900:CDS 30.0%
!!! GATTTTTTGGTGTGTGAATA+TGG + chr4_1:21250315-21250334 Msa0539900:CDS 30.0%
GAATGCAGATGAGATAAAAA+TGG + chr4_1:21250362-21250381 Msa0539900:CDS 30.0%
AAATCATTGAAAAGAGCTAC+AGG - chr4_1:21250420-21250439 None:intergenic 30.0%
! AATAGTAGCAAGATTTTGAG+TGG + chr4_1:21250550-21250569 Msa0539900:intron 30.0%
TTTGATCCAATCTCTCTTTA+TGG + chr4_1:21250592-21250611 Msa0539900:intron 30.0%
ATTTCACCATAAAGAGAGAT+TGG - chr4_1:21250601-21250620 None:intergenic 30.0%
GAAATTGCTTCTCAAATTGT+AGG + chr4_1:21250616-21250635 Msa0539900:intron 30.0%
TTCTAACCACTACACAATTT+GGG - chr4_1:21250662-21250681 None:intergenic 30.0%
ATTCTAACCACTACACAATT+TGG - chr4_1:21250663-21250682 None:intergenic 30.0%
AAGACAATAAGTAGAGAATC+TGG + chr4_1:21250693-21250712 Msa0539900:intron 30.0%
CTAAACATAGCTCAGTTAAT+AGG - chr4_1:21250756-21250775 None:intergenic 30.0%
TAACAACAAATGTACCTATC+AGG - chr4_1:21251020-21251039 None:intergenic 30.0%
!! TTTTAATCACCTGAAAGCAT+TGG - chr4_1:21251357-21251376 None:intergenic 30.0%
! GTTTTCTTTTTGTGTGTTCA+GGG - chr4_1:21251458-21251477 None:intergenic 30.0%
! AGTTTTCTTTTTGTGTGTTC+AGG - chr4_1:21251459-21251478 None:intergenic 30.0%
GTGACATAATATCCAATTTG+TGG + chr4_1:21251657-21251676 Msa0539900:CDS 30.0%
GACATAATATCCAATTTGTG+GGG + chr4_1:21251659-21251678 Msa0539900:CDS 30.0%
!! TTTTGAAGACGGTAGTAAAA+TGG + chr4_1:21252050-21252069 Msa0539900:intron 30.0%
ATGGTTCTTGCTACAAAATT+AGG - chr4_1:21252115-21252134 None:intergenic 30.0%
AAAACATGAAGCATATAACC+AGG + chr4_1:21252137-21252156 Msa0539900:intron 30.0%
!! GATTAGTCTGCTTATATAGA+AGG + chr4_1:21252384-21252403 Msa0539900:three_prime_UTR 30.0%
CATGCTTATGAGAAATATGG+GGG - chr4_1:21250086-21250105 None:intergenic 35.0%
!! TTTTGGTGTGTGAATATGGA+TGG + chr4_1:21250319-21250338 Msa0539900:CDS 35.0%
TTGCTTCTCAAATTGTAGGA+TGG + chr4_1:21250620-21250639 Msa0539900:intron 35.0%
! TCTTTTCCCAAATTGTGTAG+TGG + chr4_1:21250653-21250672 Msa0539900:intron 35.0%
! TAAGTAGAGAATCTGGAGTT+CGG + chr4_1:21250700-21250719 Msa0539900:intron 35.0%
AAAGGCAAATAAAGTGTGGT+AGG - chr4_1:21250911-21250930 None:intergenic 35.0%
TATCCATTCTTGACCCAAAT+AGG + chr4_1:21250950-21250969 Msa0539900:intron 35.0%
TTAAATACTCACCTCCTGAT+AGG + chr4_1:21251003-21251022 Msa0539900:CDS 35.0%
ATTTAGGTATGCTTGTTTGG+TGG + chr4_1:21251199-21251218 Msa0539900:intron 35.0%
GAATGATCAAGATTCACCAA+AGG + chr4_1:21251226-21251245 Msa0539900:CDS 35.0%
ATAACACCTACAAGTTCCTT+TGG - chr4_1:21251245-21251264 None:intergenic 35.0%
!! CAAGAGTACCTTTACATTTC+AGG + chr4_1:21251320-21251339 Msa0539900:CDS 35.0%
AAACTCATTACCCCACAAAT+TGG - chr4_1:21251672-21251691 None:intergenic 35.0%
AATCTTCTTCATAGGCTCTA+AGG - chr4_1:21251700-21251719 None:intergenic 35.0%
TAGAGCCTATGAAGAAGATT+TGG + chr4_1:21251700-21251719 Msa0539900:CDS 35.0%
AGAGCCTATGAAGAAGATTT+GGG + chr4_1:21251701-21251720 Msa0539900:CDS 35.0%
! GTGGATCTTTAGAAACAAGT+TGG - chr4_1:21251757-21251776 None:intergenic 35.0%
!! TTGTTTCTAAAGATCCACCA+TGG + chr4_1:21251759-21251778 Msa0539900:CDS 35.0%
TATTTCAGTGTCATCGATCA+TGG + chr4_1:21251997-21252016 Msa0539900:three_prime_UTR 35.0%
ACAATCAAAGAAAGAGCTCA+AGG + chr4_1:21252446-21252465 Msa0539900:three_prime_UTR 35.0%
CAATCAAAGAAAGAGCTCAA+GGG + chr4_1:21252447-21252466 Msa0539900:three_prime_UTR 35.0%
TGCTGATCAGAAAGTGATGT+TGG + chr4_1:21250254-21250273 Msa0539900:CDS 40.0%
GTGAATATGGATGGAGGATA+AGG + chr4_1:21250328-21250347 Msa0539900:CDS 40.0%
AAAGTGTGGTAGGTGCTTAA+TGG - chr4_1:21250901-21250920 None:intergenic 40.0%
!! GAAAGCACTTCAGCCTATTT+GGG - chr4_1:21250966-21250985 None:intergenic 40.0%
!! TGAAAGCACTTCAGCCTATT+TGG - chr4_1:21250967-21250986 None:intergenic 40.0%
! AAATAGGCTGAAGTGCTTTC+AGG + chr4_1:21250966-21250985 Msa0539900:intron 40.0%
CAACAAATGTACCTATCAGG+AGG - chr4_1:21251017-21251036 None:intergenic 40.0%
GATTCACCAAAGGAACTTGT+AGG + chr4_1:21251236-21251255 Msa0539900:CDS 40.0%
CAGCTATGCCTGAAATGTAA+AGG - chr4_1:21251331-21251350 None:intergenic 40.0%
! ATGAGACTAATTGATGGCAC+AGG + chr4_1:21251600-21251619 Msa0539900:intron 40.0%
AGCACCCAAATCTTCTTCAT+AGG - chr4_1:21251708-21251727 None:intergenic 40.0%
CGAACATTGTACACAAATGC+TGG + chr4_1:21251728-21251747 Msa0539900:CDS 40.0%
ATCCACCATGGACAAGTAAT+TGG + chr4_1:21251771-21251790 Msa0539900:CDS 40.0%
TCCACCATGGACAAGTAATT+GGG + chr4_1:21251772-21251791 Msa0539900:CDS 40.0%
ACATGGCACTACAACAGAAA+TGG + chr4_1:21252285-21252304 Msa0539900:intron 40.0%
AGAAGGAAAAGACGATTGCA+AGG - chr4_1:21252338-21252357 None:intergenic 40.0%
! GTCGAACTAGATTTTGCAGA+AGG - chr4_1:21252355-21252374 None:intergenic 40.0%
TCGTCAGAGAAACATGAAAG+AGG + chr4_1:21252498-21252517 Msa0539900:three_prime_UTR 40.0%
CGTCAGAGAAACATGAAAGA+GGG + chr4_1:21252499-21252518 Msa0539900:three_prime_UTR 40.0%
TGGTGTGTGAATATGGATGG+AGG + chr4_1:21250322-21250341 Msa0539900:CDS 45.0%
CAGCCTATTTGGGTCAAGAA+TGG - chr4_1:21250956-21250975 None:intergenic 45.0%
GGAGATGTTCAAGCACATCT+TGG - chr4_1:21251289-21251308 None:intergenic 45.0%
TAGCTGTCTCCAATGCTTTC+AGG + chr4_1:21251345-21251364 Msa0539900:CDS 45.0%
TCGCTAACATTAGCGACTAG+TGG + chr4_1:21251521-21251540 Msa0539900:intron 45.0%
! AGACTAATTGATGGCACAGG+AGG + chr4_1:21251603-21251622 Msa0539900:intron 45.0%
ACCCAATTACTTGTCCATGG+TGG - chr4_1:21251776-21251795 None:intergenic 45.0%
CCAACCCAATTACTTGTCCA+TGG - chr4_1:21251779-21251798 None:intergenic 45.0%
CCATGGACAAGTAATTGGGT+TGG + chr4_1:21251776-21251795 Msa0539900:CDS 45.0%
CTGACGAACACACTGTTCTA+CGG - chr4_1:21252485-21252504 None:intergenic 45.0%
CAGAGAAACATGAAAGAGGG+AGG + chr4_1:21252502-21252521 Msa0539900:three_prime_UTR 45.0%
GGTACTCTTGTGCTTCAGCA+GGG - chr4_1:21251310-21251329 None:intergenic 50.0%
AGGTACTCTTGTGCTTCAGC+AGG - chr4_1:21251311-21251330 None:intergenic 50.0%
! CTAATTGATGGCACAGGAGG+AGG + chr4_1:21251606-21251625 Msa0539900:intron 50.0%
! CATGAGAGAAGTGCGATCTG+AGG + chr4_1:21252410-21252429 Msa0539900:three_prime_UTR 50.0%
!! GAAAGAGGGAGGAGTGTCGT+AGG + chr4_1:21252513-21252532 Msa0539900:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 21249905 21252537 21249905 ID=Msa0539900;Name=Msa0539900
chr4_1 mRNA 21249905 21252537 21249905 ID=Msa0539900-mRNA-1;Parent=Msa0539900;Name=Msa0539900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=155|1|1|1|0.75|0.6|5|401|284
chr4_1 exon 21249905 21250458 21249905 ID=Msa0539900-mRNA-1:exon:6060;Parent=Msa0539900-mRNA-1
chr4_1 exon 21250972 21251024 21250972 ID=Msa0539900-mRNA-1:exon:6061;Parent=Msa0539900-mRNA-1
chr4_1 exon 21251205 21251366 21251205 ID=Msa0539900-mRNA-1:exon:6062;Parent=Msa0539900-mRNA-1
chr4_1 exon 21251622 21252046 21251622 ID=Msa0539900-mRNA-1:exon:6063;Parent=Msa0539900-mRNA-1
chr4_1 exon 21252321 21252537 21252321 ID=Msa0539900-mRNA-1:exon:6064;Parent=Msa0539900-mRNA-1
chr4_1 five_prime_UTR 21249905 21250059 21249905 ID=Msa0539900-mRNA-1:five_prime_utr;Parent=Msa0539900-mRNA-1
chr4_1 CDS 21250060 21250458 21250060 ID=Msa0539900-mRNA-1:cds;Parent=Msa0539900-mRNA-1
chr4_1 CDS 21250972 21251024 21250972 ID=Msa0539900-mRNA-1:cds;Parent=Msa0539900-mRNA-1
chr4_1 CDS 21251205 21251366 21251205 ID=Msa0539900-mRNA-1:cds;Parent=Msa0539900-mRNA-1
chr4_1 CDS 21251622 21251862 21251622 ID=Msa0539900-mRNA-1:cds;Parent=Msa0539900-mRNA-1
chr4_1 three_prime_UTR 21251863 21252046 21251863 ID=Msa0539900-mRNA-1:three_prime_utr;Parent=Msa0539900-mRNA-1
chr4_1 three_prime_UTR 21252321 21252537 21252321 ID=Msa0539900-mRNA-1:three_prime_utr;Parent=Msa0539900-mRNA-1
Gene Sequence

>Msa0539900

ATGGCACATTTATTTTCAAGCAACCCCCATATTTCTCATAAGCATGTTATATGTTCAAATGGAAGGTATTATGATGTTATAACAACACCAAAAAATGCATGCTATAGAATAAGAAGAAAAAGAAAAACTTGGAGTGGTTCAAAGTTGCAATGCAGTAGAAGCAATAGTACAAGTAGTTCAGAACAATTATATTTTGCTGATCAGAAAGTGATGTTGGAAATTGAGAATGATAGTGAAAATATGAAGCAAAAGTTGGATTTTTTGGTGTGTGAATATGGATGGAGGATAAGGAGATTAATTGAGAATGCAGATGAGATAAAAATGGCTGCTCAAGTTCAAGCTGAAGCTTTTCATGATCCTGTAGCTCTTTTCAATGATTTGTTCTTTCAATTCTTTAAGGCTGAAGTGCTTTCAGGACTGCTTTACAAGCTTAAATACTCACCTCCTGATAGGTATGCTTGTTTGGTGGCTGAGAATGATCAAGATTCACCAAAGGAACTTGTAGGTGTTATAGATGTTACTGTAATGAGAGACCAAGATGTGCTTGAACATCTCCCTGCTGAAGCACAAGAGTACCTTTACATTTCAGGCATAGCTGTCTCCAATGCTTTCAGGAGGAGGAAAATAGCAACTGTTATGTTGAAAGCATGTGACATAATATCCAATTTGTGGGGTAATGAGTTTCTTGTCCTTAGAGCCTATGAAGAAGATTTGGGTGCTCGAACATTGTACACAAATGCTGGCTACCAACTTGTTTCTAAAGATCCACCATGGACAAGTAATTGGGTTGGAAGAAAATGTCGTGTTCTTATGATCAAAAGAATTAGTTTATTTCCTAATCAAGTAGATTATTAA

Protein sequence

>Msa0539900

MAHLFSSNPHISHKHVICSNGRYYDVITTPKNACYRIRRKRKTWSGSKLQCSRSNSTSSSEQLYFADQKVMLEIENDSENMKQKLDFLVCEYGWRIRRLIENADEIKMAAQVQAEAFHDPVALFNDLFFQFFKAEVLSGLLYKLKYSPPDRYACLVAENDQDSPKELVGVIDVTVMRDQDVLEHLPAEAQEYLYISGIAVSNAFRRRKIATVMLKACDIISNLWGNEFLVLRAYEEDLGARTLYTNAGYQLVSKDPPWTSNWVGRKCRVLMIKRISLFPNQVDY*