Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054010 | sp|Q9Y673|ALG5_HUMAN | 46.570 | 277 | 134 | 2 | 85 | 360 | 57 | 320 | 1.02e-84 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054010 | G7L022 | 88.643 | 361 | 10 | 1 | 1 | 361 | 1 | 330 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033880 | Msa1054010 | 0.828362 | 9.380439e-55 | -8.615850e-47 |
| Msa0037160 | Msa1054010 | 0.825063 | 5.750111e-54 | -8.615850e-47 |
| Msa0055100 | Msa1054010 | 0.803334 | 3.662602e-49 | -8.615850e-47 |
| Msa0081650 | Msa1054010 | 0.801012 | 1.100405e-48 | -8.615850e-47 |
| Msa0091500 | Msa1054010 | 0.801282 | 9.691286e-49 | -8.615850e-47 |
| Msa0096580 | Msa1054010 | 0.808234 | 3.422701e-50 | -8.615850e-47 |
| Msa0097950 | Msa1054010 | 0.803613 | 3.206908e-49 | -8.615850e-47 |
| Msa0100160 | Msa1054010 | 0.801925 | 7.151855e-49 | -8.615850e-47 |
| Msa0108870 | Msa1054010 | 0.801061 | 1.075254e-48 | -8.615850e-47 |
| Msa0603670 | Msa1054010 | 0.801157 | 1.027928e-48 | -8.615850e-47 |
| Msa0610500 | Msa1054010 | 0.807790 | 4.256017e-50 | -8.615850e-47 |
| Msa0614510 | Msa1054010 | 0.827162 | 1.821438e-54 | -8.615850e-47 |
| Msa0618950 | Msa1054010 | 0.830218 | 3.323313e-55 | -8.615850e-47 |
| Msa0618970 | Msa1054010 | 0.820857 | 5.494877e-53 | -8.615850e-47 |
| Msa0628420 | Msa1054010 | 0.839865 | 1.226872e-57 | -8.615850e-47 |
| Msa0641140 | Msa1054010 | 0.804122 | 2.513705e-49 | -8.615850e-47 |
| Msa0647930 | Msa1054010 | 0.835781 | 1.374199e-56 | -8.615850e-47 |
| Msa0647950 | Msa1054010 | 0.832552 | 8.859037e-56 | -8.615850e-47 |
| Msa0651150 | Msa1054010 | 0.806250 | 9.009626e-50 | -8.615850e-47 |
| Msa0652300 | Msa1054010 | 0.815782 | 7.751442e-52 | -8.615850e-47 |
| Msa0652690 | Msa1054010 | 0.812658 | 3.795800e-51 | -8.615850e-47 |
| Msa0661090 | Msa1054010 | 0.809710 | 1.654126e-50 | -8.615850e-47 |
| Msa0667770 | Msa1054010 | 0.807011 | 6.226164e-50 | -8.615850e-47 |
| Msa0667790 | Msa1054010 | 0.821903 | 3.152654e-53 | -8.615850e-47 |
| Msa0679100 | Msa1054010 | 0.811146 | 8.100712e-51 | -8.615850e-47 |
| Msa0694840 | Msa1054010 | 0.804214 | 2.405611e-49 | -8.615850e-47 |
| Msa0705390 | Msa1054010 | 0.806779 | 6.969899e-50 | -8.615850e-47 |
| Msa0706390 | Msa1054010 | 0.809049 | 2.292308e-50 | -8.615850e-47 |
| Msa0756930 | Msa1054010 | 0.810011 | 1.424783e-50 | -8.615850e-47 |
| Msa0781270 | Msa1054010 | 0.814296 | 1.656018e-51 | -8.615850e-47 |
| Msa0787150 | Msa1054010 | 0.801105 | 1.053475e-48 | -8.615850e-47 |
| Msa0807070 | Msa1054010 | -0.803486 | 3.407761e-49 | -8.615850e-47 |
| Msa0822310 | Msa1054010 | -0.802921 | 4.460572e-49 | -8.615850e-47 |
| Msa0827280 | Msa1054010 | 0.830946 | 2.205552e-55 | -8.615850e-47 |
| Msa0828680 | Msa1054010 | 0.821950 | 3.074240e-53 | -8.615850e-47 |
| Msa0829220 | Msa1054010 | 0.813907 | 2.017883e-51 | -8.615850e-47 |
| Msa0831100 | Msa1054010 | 0.804547 | 2.050227e-49 | -8.615850e-47 |
| Msa0836500 | Msa1054010 | 0.818951 | 1.498883e-52 | -8.615850e-47 |
| Msa0127850 | Msa1054010 | 0.827980 | 1.159284e-54 | -8.615850e-47 |
| Msa0136120 | Msa1054010 | 0.801023 | 1.094874e-48 | -8.615850e-47 |
| Msa0138750 | Msa1054010 | 0.801505 | 8.722110e-49 | -8.615850e-47 |
| Msa0168870 | Msa1054010 | 0.812472 | 4.166693e-51 | -8.615850e-47 |
| Msa0174000 | Msa1054010 | 0.811064 | 8.441022e-51 | -8.615850e-47 |
| Msa0177210 | Msa1054010 | 0.807431 | 5.072568e-50 | -8.615850e-47 |
| Msa0177270 | Msa1054010 | 0.800508 | 1.394384e-48 | -8.615850e-47 |
| Msa0183900 | Msa1054010 | 0.803938 | 2.744895e-49 | -8.615850e-47 |
| Msa0191070 | Msa1054010 | 0.810687 | 1.018407e-50 | -8.615850e-47 |
| Msa0197510 | Msa1054010 | 0.802456 | 5.561254e-49 | -8.615850e-47 |
| Msa0198530 | Msa1054010 | 0.801531 | 8.616236e-49 | -8.615850e-47 |
| Msa0218350 | Msa1054010 | 0.812810 | 3.515140e-51 | -8.615850e-47 |
| Msa0224030 | Msa1054010 | 0.838084 | 3.547699e-57 | -8.615850e-47 |
| Msa0377450 | Msa1054010 | 0.806289 | 8.841620e-50 | -8.615850e-47 |
| Msa0378970 | Msa1054010 | 0.829648 | 4.577713e-55 | -8.615850e-47 |
| Msa0419720 | Msa1054010 | 0.809574 | 1.769026e-50 | -8.615850e-47 |
| Msa0427040 | Msa1054010 | 0.805362 | 1.384899e-49 | -8.615850e-47 |
| Msa0428050 | Msa1054010 | 0.831477 | 1.632900e-55 | -8.615850e-47 |
| Msa0474390 | Msa1054010 | 0.805245 | 1.465408e-49 | -8.615850e-47 |
| Msa0474940 | Msa1054010 | 0.824264 | 8.869391e-54 | -8.615850e-47 |
| Msa0480780 | Msa1054010 | 0.808309 | 3.300105e-50 | -8.615850e-47 |
| Msa0997430 | Msa1054010 | 0.804917 | 1.715846e-49 | -8.615850e-47 |
| Msa1012540 | Msa1054010 | 0.843957 | 1.017566e-58 | -8.615850e-47 |
| Msa1025260 | Msa1054010 | 0.809898 | 1.507143e-50 | -8.615850e-47 |
| Msa1028590 | Msa1054010 | 0.817744 | 2.813605e-52 | -8.615850e-47 |
| Msa1040800 | Msa1054010 | 0.813379 | 2.637485e-51 | -8.615850e-47 |
| Msa1040840 | Msa1054010 | 0.814662 | 1.374664e-51 | -8.615850e-47 |
| Msa1041210 | Msa1054010 | 0.816788 | 4.616431e-52 | -8.615850e-47 |
| Msa1054010 | Msa1089320 | 0.813136 | 2.981476e-51 | -8.615850e-47 |
| Msa1054010 | Msa1109350 | 0.815204 | 1.042123e-51 | -8.615850e-47 |
| Msa1054010 | Msa1126450 | 0.813339 | 2.690676e-51 | -8.615850e-47 |
| Msa1054010 | Msa1171830 | 0.824948 | 6.120726e-54 | -8.615850e-47 |
| Msa1054010 | Msa1206310 | 0.814656 | 1.378365e-51 | -8.615850e-47 |
| Msa1054010 | Msa1206360 | 0.822150 | 2.762988e-53 | -8.615850e-47 |
| Msa1054010 | Msa1230040 | 0.808423 | 3.120437e-50 | -8.615850e-47 |
| Msa1054010 | Msa1278900 | 0.805034 | 1.622244e-49 | -8.615850e-47 |
| Msa1054010 | Msa1307180 | 0.801335 | 9.453365e-49 | -8.615850e-47 |
| Msa1054010 | Msa1340830 | 0.809456 | 1.875193e-50 | -8.615850e-47 |
| Msa1054010 | Msa1353980 | 0.811683 | 6.194164e-51 | -8.615850e-47 |
| Msa1054010 | Msa1359560 | 0.800700 | 1.274129e-48 | -8.615850e-47 |
| Msa1054010 | Msa1364210 | 0.813187 | 2.906528e-51 | -8.615850e-47 |
| Msa1054010 | Msa1372310 | 0.812587 | 3.933079e-51 | -8.615850e-47 |
| Msa1054010 | Msa1376130 | 0.803942 | 2.739612e-49 | -8.615850e-47 |
| Msa1054010 | Msa1384870 | 0.836103 | 1.138557e-56 | -8.615850e-47 |
| Msa1054010 | Msa1407190 | 0.822395 | 2.423689e-53 | -8.615850e-47 |
| Msa1054010 | Msa1411950 | 0.826240 | 3.023429e-54 | -8.615850e-47 |
| Msa1054010 | Msa1424780 | 0.810196 | 1.299964e-50 | -8.615850e-47 |
| Msa1054010 | Msa1432130 | 0.822450 | 2.353616e-53 | -8.615850e-47 |
| Msa1054010 | Msa1448490 | 0.804796 | 1.819184e-49 | -8.615850e-47 |
| Msa0244980 | Msa1054010 | 0.804418 | 2.181328e-49 | -8.615850e-47 |
| Msa0271810 | Msa1054010 | 0.830717 | 2.509392e-55 | -8.615850e-47 |
| Msa0310410 | Msa1054010 | 0.820009 | 8.599000e-53 | -8.615850e-47 |
| Msa0342010 | Msa1054010 | 0.802756 | 4.824696e-49 | -8.615850e-47 |
| Msa0343190 | Msa1054010 | 0.816158 | 6.387291e-52 | -8.615850e-47 |
| Msa0517640 | Msa1054010 | 0.800468 | 1.421174e-48 | -8.615850e-47 |
| Msa0518440 | Msa1054010 | 0.828430 | 9.032525e-55 | -8.615850e-47 |
| Msa0531250 | Msa1054010 | 0.829383 | 5.308187e-55 | -8.615850e-47 |
| Msa0532980 | Msa1054010 | 0.809851 | 1.542351e-50 | -8.615850e-47 |
| Msa0545060 | Msa1054010 | 0.807916 | 4.001646e-50 | -8.615850e-47 |
| Msa0546570 | Msa1054010 | 0.802448 | 5.582901e-49 | -8.615850e-47 |
| Msa0556790 | Msa1054010 | 0.806730 | 7.136282e-50 | -8.615850e-47 |
| Msa0560500 | Msa1054010 | 0.810893 | 9.191017e-51 | -8.615850e-47 |
| Msa0574390 | Msa1054010 | 0.804785 | 1.828576e-49 | -8.615850e-47 |
| Msa0576680 | Msa1054010 | 0.815712 | 8.032026e-52 | -8.615850e-47 |
| Msa0584550 | Msa1054010 | 0.804961 | 1.680277e-49 | -8.615850e-47 |
| Msa0588090 | Msa1054010 | 0.853083 | 3.021516e-61 | -8.615850e-47 |
| Msa0844230 | Msa1054010 | 0.812292 | 4.561624e-51 | -8.615850e-47 |
| Msa0880450 | Msa1054010 | 0.809854 | 1.539947e-50 | -8.615850e-47 |
| Msa0899350 | Msa1054010 | 0.807330 | 5.329389e-50 | -8.615850e-47 |
| Msa0906690 | Msa1054010 | 0.802495 | 5.460780e-49 | -8.615850e-47 |
| Msa0906780 | Msa1054010 | 0.815121 | 1.087038e-51 | -8.615850e-47 |
| Msa0945240 | Msa1054010 | 0.809086 | 2.251104e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054010 | MtrunA17_Chr7g0223941 | 88.643 | 361 | 10 | 1 | 1 | 361 | 1 | 330 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054010 | AT2G39630.1 | 65.110 | 364 | 89 | 3 | 1 | 357 | 1 | 333 | 2.72e-172 | 483 |
| Msa1054010 | AT2G39630.3 | 56.420 | 257 | 74 | 3 | 1 | 250 | 1 | 226 | 7.58e-95 | 282 |
| Msa1054010 | AT2G39630.2 | 55.769 | 260 | 77 | 3 | 1 | 253 | 1 | 229 | 9.88e-95 | 282 |
| Msa1054010 | AT1G20575.1 | 23.045 | 243 | 154 | 7 | 96 | 331 | 16 | 232 | 2.97e-12 | 66.2 |
Find 106 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTATACGATTGATTTA+TGG | 0.108258 | 7_2:-24900613 | Msa1054010:three_prime_UTR |
| TGAGCTGCAATGATCAATTT+TGG | 0.146045 | 7_2:-24901082 | Msa1054010:three_prime_UTR |
| ATTACAGAAATCTCCGAAAT+TGG | 0.182035 | 7_2:+24901223 | None:intergenic |
| CTGCTAGCGATTTGCGATTC+TGG | 0.202292 | 7_2:+24906535 | None:intergenic |
| TTTCGGAGATTTCTGTAATT+TGG | 0.218089 | 7_2:-24901219 | Msa1054010:CDS |
| TTTACCTGTTTCAATGAATT+AGG | 0.218728 | 7_2:+24906021 | None:intergenic |
| TAAGCTGCATGATTATCTTT+TGG | 0.228680 | 7_2:-24900656 | Msa1054010:three_prime_UTR |
| GACACCCCTGTTGTTGTATT+TGG | 0.252322 | 7_2:-24903290 | Msa1054010:CDS |
| GCTTTCTGTGCTCATCATTC+CGG | 0.259623 | 7_2:-24900762 | Msa1054010:three_prime_UTR |
| GTTCCATCTTGTGGTTCTAT+TGG | 0.261838 | 7_2:-24903111 | Msa1054010:CDS |
| ACATTATACGATTGATTTAT+GGG | 0.280575 | 7_2:-24900612 | Msa1054010:three_prime_UTR |
| GTGCATTTCACATACATCTT+TGG | 0.283352 | 7_2:-24905109 | Msa1054010:CDS |
| ATCATTATGATGTCACTCTT+TGG | 0.312196 | 7_2:+24901036 | None:intergenic |
| AGATCGTGTCATTGAGGGTT+TGG | 0.319429 | 7_2:-24900964 | Msa1054010:three_prime_UTR |
| TTCACTGTGACTTTGGTGTT+AGG | 0.324846 | 7_2:-24906223 | Msa1054010:CDS |
| AATGAGGAGCATCGGCTTCC+TGG | 0.326491 | 7_2:-24904819 | Msa1054010:CDS |
| GTTCTATTGGCTGCTGGTCC+TGG | 0.327386 | 7_2:-24903098 | Msa1054010:CDS |
| ATGATACATTTAAAGTTTGT+AGG | 0.330794 | 7_2:-24901018 | Msa1054010:three_prime_UTR |
| AAAGTAAGGGTCATCCTTCT+TGG | 0.340897 | 7_2:-24903736 | Msa1054010:CDS |
| CTTTCTGTGCTCATCATTCC+GGG | 0.343394 | 7_2:-24900761 | Msa1054010:three_prime_UTR |
| TGAGTATACCAAACATGGTT+TGG | 0.344421 | 7_2:-24901165 | Msa1054010:CDS |
| ATGAAGGCACATTGAAGTTC+CGG | 0.352307 | 7_2:-24906058 | Msa1054010:intron |
| GATCGTGTCATTGAGGGTTT+GGG | 0.357132 | 7_2:-24900963 | Msa1054010:three_prime_UTR |
| TGTAATTTGGTCCGAGATCC+CGG | 0.368886 | 7_2:-24901206 | Msa1054010:CDS |
| CGTCCTGATGTTCTCATATC+AGG | 0.371083 | 7_2:-24905077 | Msa1054010:CDS |
| GATTCTAGCTGTTGCCAAAA+AGG | 0.376100 | 7_2:-24903354 | Msa1054010:CDS |
| CGTGAACCAAATACAACAAC+AGG | 0.386480 | 7_2:+24903284 | None:intergenic |
| TGTGACTTTCACTGTGACTT+TGG | 0.386519 | 7_2:-24906230 | Msa1054010:CDS |
| AGCTTCTGCTCATGTCTGTT+GGG | 0.388610 | 7_2:-24901141 | Msa1054010:CDS |
| CTTAACATCTGCAGAGGAAA+TGG | 0.393680 | 7_2:-24903157 | Msa1054010:intron |
| GGATCCTAATTCATTGAAAC+AGG | 0.393803 | 7_2:-24906025 | Msa1054010:intron |
| TTGGGTACAGGATCGGTATA+TGG | 0.400208 | 7_2:-24901123 | Msa1054010:CDS |
| GAGTAGCTTTCGAATTTGTA+AGG | 0.400729 | 7_2:-24903774 | Msa1054010:CDS |
| AATACACAGTAGACAAAGTA+AGG | 0.406041 | 7_2:-24903750 | Msa1054010:CDS |
| GAGTATACCAAACATGGTTT+GGG | 0.406524 | 7_2:-24901164 | Msa1054010:CDS |
| TCACTGTGACTTTGGTGTTA+GGG | 0.407827 | 7_2:-24906222 | Msa1054010:CDS |
| GTGGTTTCGGATCCCAATTT+CGG | 0.411890 | 7_2:-24901236 | Msa1054010:CDS |
| AGAAGCTCCCAAACCATGTT+TGG | 0.417258 | 7_2:+24901157 | None:intergenic |
| CAGCACAATCCGGAAGGTTA+TGG | 0.418024 | 7_2:+24900990 | None:intergenic |
| ATTGATGATGGAAGTGTTGA+TGG | 0.419572 | 7_2:-24903805 | Msa1054010:CDS |
| CTTGTGGTTCTATTGGCTGC+TGG | 0.420098 | 7_2:-24903104 | Msa1054010:CDS |
| CACCTTTGATCCCGGGATCT+CGG | 0.426073 | 7_2:+24901195 | None:intergenic |
| TGCTCATGTCTGTTGGGTAC+AGG | 0.426171 | 7_2:-24901135 | Msa1054010:CDS |
| TAGGACTAACCATAACCTTC+CGG | 0.431886 | 7_2:-24900999 | Msa1054010:three_prime_UTR |
| GAGCTTCTGCTCATGTCTGT+TGG | 0.437630 | 7_2:-24901142 | Msa1054010:CDS |
| TTACAGAAATCTCCGAAATT+GGG | 0.447671 | 7_2:+24901224 | None:intergenic |
| GATAGCAGGTGGAAGCAATA+AGG | 0.447812 | 7_2:-24906274 | Msa1054010:intron |
| TTTCAAATGTCCGTTTGAAA+AGG | 0.450479 | 7_2:-24902865 | Msa1054010:intron |
| CAGGTTGTAATTATTGATGA+TGG | 0.455148 | 7_2:-24903817 | Msa1054010:CDS |
| TATCAAAGAGATATACTTTG+AGG | 0.458642 | 7_2:+24904854 | None:intergenic |
| AGAAGGTTCACCTTTGATCC+CGG | 0.459758 | 7_2:+24901187 | None:intergenic |
| TGCCATGATTTCTTCCAAGA+AGG | 0.466787 | 7_2:+24903722 | None:intergenic |
| TGTTCAGATCGTGTCATTGA+GGG | 0.477165 | 7_2:-24900969 | Msa1054010:three_prime_UTR |
| ATCCTTCTTGGAAGAAATCA+TGG | 0.481408 | 7_2:-24903724 | Msa1054010:CDS |
| TGAAAATAACTCGCCAGTGT+TGG | 0.488871 | 7_2:+24900786 | None:intergenic |
| GTGGTTTCAAGATGTTTACT+AGG | 0.489268 | 7_2:-24902907 | Msa1054010:CDS |
| CTTCTCATGCTTGACGCAGA+TGG | 0.489480 | 7_2:-24903531 | Msa1054010:CDS |
| TCATCTAGAGGAGAAAGCTT+TGG | 0.491656 | 7_2:-24903258 | Msa1054010:CDS |
| ACCTGTGTATCACGAATTCC+AGG | 0.495020 | 7_2:+24903080 | None:intergenic |
| CATCGCAAACGGCAAGCAGC+AGG | 0.497826 | 7_2:-24906580 | Msa1054010:five_prime_UTR |
| ATGCCTGATATGAGAACATC+AGG | 0.498744 | 7_2:+24905074 | None:intergenic |
| ACAAAATCGCACATCGCAAA+CGG | 0.511381 | 7_2:-24906591 | Msa1054010:five_prime_UTR |
| GAAGGTTCACCTTTGATCCC+GGG | 0.515749 | 7_2:+24901188 | None:intergenic |
| GATGAAGGGGTTCCATCTTG+TGG | 0.515876 | 7_2:-24903120 | Msa1054010:CDS |
| CTGTTCAGATCGTGTCATTG+AGG | 0.527054 | 7_2:-24900970 | Msa1054010:three_prime_UTR |
| CAGAATCGCAAATCGCTAGC+AGG | 0.527183 | 7_2:-24906534 | Msa1054010:five_prime_UTR |
| CCTTCTGAGTATACCAAACA+TGG | 0.531326 | 7_2:-24901170 | Msa1054010:CDS |
| GTCCGAGATCCCGGGATCAA+AGG | 0.533458 | 7_2:-24901197 | Msa1054010:CDS |
| CATATAACATTTCATTGCTT+AGG | 0.539201 | 7_2:-24900827 | Msa1054010:three_prime_UTR |
| CTTACATCATAGTTTCCTCA+AGG | 0.542131 | 7_2:+24904793 | None:intergenic |
| ACGATCTGAACAGCACAATC+CGG | 0.544258 | 7_2:+24900980 | None:intergenic |
| TCTGCAACATCGTGCTTCAA+AGG | 0.544614 | 7_2:-24904133 | Msa1054010:CDS |
| ATAGTTTCCTCAAGGGCACC+AGG | 0.545324 | 7_2:+24904801 | None:intergenic |
| ATTGATCATTGCAGCTCATG+TGG | 0.547048 | 7_2:+24901087 | None:intergenic |
| TGGTTTCAAGATGTTTACTA+GGG | 0.549468 | 7_2:-24902906 | Msa1054010:CDS |
| GTAATTTGGTCCGAGATCCC+GGG | 0.551672 | 7_2:-24901205 | Msa1054010:CDS |
| CGATGCTCCTCATTGTATGC+TGG | 0.556845 | 7_2:+24904828 | None:intergenic |
| ATGTCTGTTGGGTACAGGAT+CGG | 0.557307 | 7_2:-24901130 | Msa1054010:CDS |
| AAAGAGATATACTTTGAGGC+AGG | 0.564693 | 7_2:+24904858 | None:intergenic |
| TAATCCCAGTCTCAAGAGGA+AGG | 0.567509 | 7_2:-24905146 | Msa1054010:intron |
| TCGGCTTCCTGGTGCCCTTG+AGG | 0.569066 | 7_2:-24904808 | Msa1054010:CDS |
| CCATGTTTGGTATACTCAGA+AGG | 0.573386 | 7_2:+24901170 | None:intergenic |
| CAGCATACAATGAGGAGCAT+CGG | 0.578638 | 7_2:-24904827 | Msa1054010:CDS |
| CAGGTGGAAGCAATAAGGAA+TGG | 0.581615 | 7_2:-24906269 | Msa1054010:exon |
| CTAGCGATTTGCGATTCTGG+TGG | 0.582805 | 7_2:+24906538 | None:intergenic |
| CAGTCGTAACATTTAGTACC+CGG | 0.587041 | 7_2:+24900743 | None:intergenic |
| ATGAGAACATCAGGACGCAC+AGG | 0.589409 | 7_2:+24905083 | None:intergenic |
| GGTACCTCGTATGAAAATGA+AGG | 0.591732 | 7_2:+24904108 | None:intergenic |
| GAGGCAGGATCAACAACATG+TGG | 0.594968 | 7_2:+24904873 | None:intergenic |
| CAGCCAATAGAACCACAAGA+TGG | 0.606665 | 7_2:+24903108 | None:intergenic |
| CTTGGAAGAAATCATGGCAA+GGG | 0.608322 | 7_2:-24903718 | Msa1054010:CDS |
| TCCTGGAATTCGTGATACAC+AGG | 0.615431 | 7_2:-24903081 | Msa1054010:intron |
| TCTTGGAAGAAATCATGGCA+AGG | 0.615590 | 7_2:-24903719 | Msa1054010:CDS |
| TGTTTACTAGGGCTGCAGCT+AGG | 0.616348 | 7_2:-24902895 | Msa1054010:CDS |
| TTGATGATGGAAGTGTTGAT+GGG | 0.623032 | 7_2:-24903804 | Msa1054010:CDS |
| GGATCAACAACATGTGGGCA+AGG | 0.624779 | 7_2:+24904879 | None:intergenic |
| GATAATTCCAGCATACAATG+AGG | 0.627459 | 7_2:-24904835 | Msa1054010:CDS |
| TTACATCATAGTTTCCTCAA+GGG | 0.639281 | 7_2:+24904794 | None:intergenic |
| TGGTTCACGAGCTCATCTAG+AGG | 0.650174 | 7_2:-24903270 | Msa1054010:CDS |
| TCTGAACAGCACAATCCGGA+AGG | 0.656459 | 7_2:+24900984 | None:intergenic |
| AGGCAGGATCAACAACATGT+GGG | 0.667598 | 7_2:+24904874 | None:intergenic |
| CAGGGAATGTTACACTCACG+CGG | 0.680774 | 7_2:-24903561 | Msa1054010:CDS |
| ATACACAGTAGACAAAGTAA+GGG | 0.692753 | 7_2:-24903749 | Msa1054010:CDS |
| GTGAACCAAATACAACAACA+GGG | 0.709497 | 7_2:+24903285 | None:intergenic |
| TTACGACTGTCTGTACTCTG+TGG | 0.718481 | 7_2:-24900729 | Msa1054010:three_prime_UTR |
| TGAACCAAATACAACAACAG+GGG | 0.741909 | 7_2:+24903286 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTTATATTTTTTTGTT+TGG | - | chr7_2:24901217-24901236 | Msa1054010:CDS | 10.0% |
| !!! | ATTTAATTCTTTTTTCATTT+AGG | - | chr7_2:24902274-24902293 | Msa1054010:intron | 10.0% |
| !! | TTCATATATATAATATATAG+AGG | + | chr7_2:24904600-24904619 | None:intergenic | 10.0% |
| !!! | AAATTTCTGTTTATTAATTT+TGG | + | chr7_2:24905151-24905170 | None:intergenic | 10.0% |
| !! | GATTAAATAAGATTCAAATA+AGG | + | chr7_2:24901038-24901057 | None:intergenic | 15.0% |
| !! | ATGCATATTATATTACAAAT+TGG | - | chr7_2:24901428-24901447 | Msa1054010:intron | 15.0% |
| !!! | ATTTATTTCAGTTTTAAACT+AGG | - | chr7_2:24901763-24901782 | Msa1054010:intron | 15.0% |
| !! | TATATAATATATAGAGGAAA+AGG | + | chr7_2:24904594-24904613 | None:intergenic | 15.0% |
| !!! | TAGTTTGAAACAAATAATTA+TGG | + | chr7_2:24904661-24904680 | None:intergenic | 15.0% |
| !! | TTGATATTATAAAAAAAAGC+AGG | - | chr7_2:24904682-24904701 | Msa1054010:intron | 15.0% |
| !! | TAGTTCAAAGATAAATATAA+TGG | + | chr7_2:24904762-24904781 | None:intergenic | 15.0% |
| !!! | AACTTGTTTTTTAACTTTTA+AGG | - | chr7_2:24905289-24905308 | Msa1054010:intron | 15.0% |
| !!! | ACTTGTTTTTTAACTTTTAA+GGG | - | chr7_2:24905290-24905309 | Msa1054010:intron | 15.0% |
| !!! | TAATCTAAATTTTAGTATAC+TGG | + | chr7_2:24905628-24905647 | None:intergenic | 15.0% |
| !!! | ATATTACATTTGTATTTTAG+TGG | - | chr7_2:24905746-24905765 | Msa1054010:intron | 15.0% |
| !!! | TTTTTACTGTTATTTATACT+AGG | - | chr7_2:24906247-24906266 | Msa1054010:CDS | 15.0% |
| !!! | TGTGATTTCAATTTTTATGA+AGG | - | chr7_2:24901104-24901123 | Msa1054010:CDS | 20.0% |
| !!! | AAATGATTGATTTTGAGTTT+TGG | - | chr7_2:24901177-24901196 | Msa1054010:CDS | 20.0% |
| !!! | TATATTTTTTTGTTTGGTGA+AGG | - | chr7_2:24901223-24901242 | Msa1054010:CDS | 20.0% |
| !!! | ATATAATATGCATGATTTTG+CGG | + | chr7_2:24901421-24901440 | None:intergenic | 20.0% |
| !! | ATTGTTTGAATTATGAAGTT+TGG | - | chr7_2:24901491-24901510 | Msa1054010:intron | 20.0% |
| !! | CATATATTTGTACTTTCTTT+AGG | + | chr7_2:24901571-24901590 | None:intergenic | 20.0% |
| !!! | CTAAAGAAAGTACAAATATA+TGG | - | chr7_2:24901569-24901588 | Msa1054010:intron | 20.0% |
| !! | TCACTCAAAACTTAAATTTA+TGG | + | chr7_2:24901740-24901759 | None:intergenic | 20.0% |
| !! | TAAAAGTAGAAATTAAGGAT+AGG | + | chr7_2:24902001-24902020 | None:intergenic | 20.0% |
| !! | GAGTATAAAAGTAGAAATTA+AGG | + | chr7_2:24902006-24902025 | None:intergenic | 20.0% |
| !!! | TAATTTCTACTTTTATACTC+TGG | - | chr7_2:24902006-24902025 | Msa1054010:intron | 20.0% |
| !!! | AACAGAAAAAGTATTCATAT+TGG | + | chr7_2:24902430-24902449 | None:intergenic | 20.0% |
| !! | CAATTGTAACAAAATATTCA+TGG | + | chr7_2:24902775-24902794 | None:intergenic | 20.0% |
| !!! | AATATTTTGTTACAATTGAG+TGG | - | chr7_2:24902777-24902796 | Msa1054010:intron | 20.0% |
| !!! | ATTGTTTAAAGTTGTTATCA+TGG | - | chr7_2:24902988-24903007 | Msa1054010:intron | 20.0% |
| !!! | TTGTTTAAAGTTGTTATCAT+GGG | - | chr7_2:24902989-24903008 | Msa1054010:intron | 20.0% |
| !! | AAACAAAAATTTCAAGAGAA+TGG | + | chr7_2:24903103-24903122 | None:intergenic | 20.0% |
| !!! | ACTCTTTATTCTTTTATCAA+TGG | - | chr7_2:24903329-24903348 | Msa1054010:CDS | 20.0% |
| !! | TAGAAGATCATAGTTTAAAT+TGG | + | chr7_2:24903508-24903527 | None:intergenic | 20.0% |
| !! | GAACAATTTATGACAAAATA+AGG | + | chr7_2:24904436-24904455 | None:intergenic | 20.0% |
| !!! | AAAATTTTCTCTTTCTTTTC+TGG | + | chr7_2:24904718-24904737 | None:intergenic | 20.0% |
| !! | AATTTGAGTAATTCTTAACA+GGG | + | chr7_2:24905210-24905229 | None:intergenic | 20.0% |
| !! | AATTACTCAAATTCTAACTT+TGG | - | chr7_2:24905217-24905236 | Msa1054010:intron | 20.0% |
| !!! | TGAATAGTGTCTTAATTTTA+AGG | - | chr7_2:24905454-24905473 | Msa1054010:intron | 20.0% |
| !! | TACTAAAATTTAGATTATCG+AGG | - | chr7_2:24905631-24905650 | Msa1054010:intron | 20.0% |
| !! | TAAGATATTCAGTTTATGTT+TGG | - | chr7_2:24905722-24905741 | Msa1054010:intron | 20.0% |
| !!! | ATGATACATTTAAAGTTTGT+AGG | - | chr7_2:24906160-24906179 | Msa1054010:intron | 20.0% |
| !!! | GTTGGATATATTTTTTCAAA+TGG | + | chr7_2:24906377-24906396 | None:intergenic | 20.0% |
| !!! | ACATTATACGATTGATTTAT+GGG | - | chr7_2:24906566-24906585 | Msa1054010:five_prime_UTR | 20.0% |
| ! | CAAAATTCAGAAATTTGAAC+AGG | + | chr7_2:24900762-24900781 | None:intergenic | 25.0% |
| ! | ATAAACAAAACCAAACCATA+GGG | + | chr7_2:24900851-24900870 | None:intergenic | 25.0% |
| ! | AATAAACAAAACCAAACCAT+AGG | + | chr7_2:24900852-24900871 | None:intergenic | 25.0% |
| ! | TTTACCTGTTTCAATGAATT+AGG | + | chr7_2:24901160-24901179 | None:intergenic | 25.0% |
| ! | TAAAACTTGTAGTCAATGAA+GGG | - | chr7_2:24901351-24901370 | Msa1054010:intron | 25.0% |
| !! | TATAATATGCATGATTTTGC+GGG | + | chr7_2:24901420-24901439 | None:intergenic | 25.0% |
| !! | TATTATTAATCTAGAGTCGT+TGG | - | chr7_2:24901965-24901984 | Msa1054010:intron | 25.0% |
| ! | TCAATGTATCAATCAAGTTA+AGG | - | chr7_2:24902199-24902218 | Msa1054010:intron | 25.0% |
| ! | TGTAAAAACCAATTCATGAT+TGG | + | chr7_2:24902246-24902265 | None:intergenic | 25.0% |
| ! | TATCAAAGAGATATACTTTG+AGG | + | chr7_2:24902327-24902346 | None:intergenic | 25.0% |
| !! | TTTCAACTTCTTTTTCTTCT+AGG | + | chr7_2:24902487-24902506 | None:intergenic | 25.0% |
| ! | TTAACTAATCTTTACAAGCT+TGG | + | chr7_2:24902543-24902562 | None:intergenic | 25.0% |
| !! | TATTTTCAACACAATAAGCT+AGG | + | chr7_2:24903134-24903153 | None:intergenic | 25.0% |
| !! | CTATATCCATTCAAATCTTT+TGG | - | chr7_2:24903253-24903272 | Msa1054010:CDS | 25.0% |
| !!! | AATTCTACTTTTGCATTGAA+TGG | - | chr7_2:24903528-24903547 | Msa1054010:CDS | 25.0% |
| !!! | ATTTTCAAGTTTTTCTAGGT+CGG | + | chr7_2:24903687-24903706 | None:intergenic | 25.0% |
| ! | ATAATGCATATTAACATCTG+AGG | + | chr7_2:24903787-24903806 | None:intergenic | 25.0% |
| !!! | TACCGTAATTTTTTGATGAA+GGG | - | chr7_2:24904044-24904063 | Msa1054010:intron | 25.0% |
| ! | AGGTCAAAAATTAATGAAGT+AGG | + | chr7_2:24904129-24904148 | None:intergenic | 25.0% |
| !! | AGAACAATTACCTTTTCAAA+CGG | + | chr7_2:24904326-24904345 | None:intergenic | 25.0% |
| !!! | TTAATTTTGGTTACACGTTA+TGG | + | chr7_2:24905138-24905157 | None:intergenic | 25.0% |
| ! | GAATTTGAGTAATTCTTAAC+AGG | + | chr7_2:24905211-24905230 | None:intergenic | 25.0% |
| ! | AAAACAACACACTAATTTCA+TGG | + | chr7_2:24905532-24905551 | None:intergenic | 25.0% |
| !!! | AAATTAGTGTGTTGTTTTCT+GGG | - | chr7_2:24905534-24905553 | Msa1054010:intron | 25.0% |
| !!! | AAGACAAGTTGATTTAAGTT+AGG | - | chr7_2:24905774-24905793 | Msa1054010:intron | 25.0% |
| !!! | AGACAAGTTGATTTAAGTTA+GGG | - | chr7_2:24905775-24905794 | Msa1054010:intron | 25.0% |
| ! | CTATTTATACCTATTCTGTA+TGG | - | chr7_2:24905823-24905842 | Msa1054010:intron | 25.0% |
| !!! | AATTAGTCTTTTTGTGTAAG+TGG | - | chr7_2:24905923-24905942 | Msa1054010:intron | 25.0% |
| ! | CATATAACATTTCATTGCTT+AGG | - | chr7_2:24906351-24906370 | Msa1054010:intron | 25.0% |
| ! | TGAAAAAATATATCCAACAC+TGG | - | chr7_2:24906379-24906398 | Msa1054010:intron | 25.0% |
| !! | CACATTATACGATTGATTTA+TGG | - | chr7_2:24906565-24906584 | Msa1054010:five_prime_UTR | 25.0% |
| AATAAAAGAACAGGAGAAGA+AGG | + | chr7_2:24900697-24900716 | None:intergenic | 30.0% | |
| AGAAATTTGAACAGGAGAAA+AGG | + | chr7_2:24900754-24900773 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCAAACAAACCCTA+TGG | - | chr7_2:24900833-24900852 | Msa1054010:three_prime_UTR | 30.0% |
| !! | AGAATTTTGTGTTTGATAGC+AGG | - | chr7_2:24900890-24900909 | Msa1054010:three_prime_UTR | 30.0% |
| !!! | TTTTGGTTTTGATCTTCTGT+TGG | - | chr7_2:24901194-24901213 | Msa1054010:CDS | 30.0% |
| !!! | TTTGGTTTTGATCTTCTGTT+GGG | - | chr7_2:24901195-24901214 | Msa1054010:CDS | 30.0% |
| AGTCGCAAAGGAAAAAAAAA+CGG | + | chr7_2:24901312-24901331 | None:intergenic | 30.0% | |
| GTAAAACTTGTAGTCAATGA+AGG | - | chr7_2:24901350-24901369 | Msa1054010:intron | 30.0% | |
| ! | ATAATATGCATGATTTTGCG+GGG | + | chr7_2:24901419-24901438 | None:intergenic | 30.0% |
| GTTTGTGTAATCTCCTAATA+TGG | - | chr7_2:24901533-24901552 | Msa1054010:intron | 30.0% | |
| AGTACAAATATATGGCTCAT+TGG | - | chr7_2:24901577-24901596 | Msa1054010:intron | 30.0% | |
| AACTACAAAACTGCAAATCA+TGG | + | chr7_2:24901858-24901877 | None:intergenic | 30.0% | |
| ! | AAGAGGAAAACATTTGAAGT+TGG | + | chr7_2:24901926-24901945 | None:intergenic | 30.0% |
| TTACATCATAGTTTCCTCAA+GGG | + | chr7_2:24902387-24902406 | None:intergenic | 30.0% | |
| !! | ACTTCTTTTTCTTCTAGGAA+GGG | + | chr7_2:24902482-24902501 | None:intergenic | 30.0% |
| !! | AACTTCTTTTTCTTCTAGGA+AGG | + | chr7_2:24902483-24902502 | None:intergenic | 30.0% |
| GTATGTCCTACTCAAATAAA+TGG | + | chr7_2:24902595-24902614 | None:intergenic | 30.0% | |
| TAAGAAAAAGAGAGGAGAAT+AGG | - | chr7_2:24902696-24902715 | Msa1054010:intron | 30.0% | |
| AAGAAAAAGAGAGGAGAATA+GGG | - | chr7_2:24902697-24902716 | Msa1054010:intron | 30.0% | |
| ! | ATTTTGTTACAATTGAGTGG+AGG | - | chr7_2:24902780-24902799 | Msa1054010:intron | 30.0% |
| GAGATAATATGAACAGGTAT+AGG | + | chr7_2:24902913-24902932 | None:intergenic | 30.0% | |
| AAATTTCAAGAGAATGGAAC+CGG | + | chr7_2:24903097-24903116 | None:intergenic | 30.0% | |
| AAAGTTCATGAGTGAAATAG+AGG | + | chr7_2:24903209-24903228 | None:intergenic | 30.0% | |
| ATCAGACCAAAAGATTTGAA+TGG | + | chr7_2:24903262-24903281 | None:intergenic | 30.0% | |
| TTGTACTTTGTATCATTCCA+TGG | - | chr7_2:24903302-24903321 | Msa1054010:CDS | 30.0% | |
| CAGGTTGTAATTATTGATGA+TGG | - | chr7_2:24903361-24903380 | Msa1054010:intron | 30.0% | |
| AATACACAGTAGACAAAGTA+AGG | - | chr7_2:24903428-24903447 | Msa1054010:intron | 30.0% | |
| ATACACAGTAGACAAAGTAA+GGG | - | chr7_2:24903429-24903448 | Msa1054010:intron | 30.0% | |
| TGCTTGTGGATCATTAATTT+AGG | - | chr7_2:24903564-24903583 | Msa1054010:intron | 30.0% | |
| !!! | CCTGATTTTCAAGTTTTTCT+AGG | + | chr7_2:24903691-24903710 | None:intergenic | 30.0% |
| CCTAGAAAAACTTGAAAATC+AGG | - | chr7_2:24903688-24903707 | Msa1054010:intron | 30.0% | |
| AAACTTGAAAATCAGGTTAC+TGG | - | chr7_2:24903695-24903714 | Msa1054010:intron | 30.0% | |
| CCATTATGATGTATACACAT+GGG | + | chr7_2:24903988-24904007 | None:intergenic | 30.0% | |
| ACCATTATGATGTATACACA+TGG | + | chr7_2:24903989-24904008 | None:intergenic | 30.0% | |
| !!! | GTACCGTAATTTTTTGATGA+AGG | - | chr7_2:24904043-24904062 | Msa1054010:intron | 30.0% |
| !!! | ACCGTAATTTTTTGATGAAG+GGG | - | chr7_2:24904045-24904064 | Msa1054010:intron | 30.0% |
| ACCCCTTCATCAAAAAATTA+CGG | + | chr7_2:24904049-24904068 | None:intergenic | 30.0% | |
| TGAGCATGTATATTTGATGT+TGG | - | chr7_2:24904209-24904228 | Msa1054010:intron | 30.0% | |
| TGGTTTCAAGATGTTTACTA+GGG | - | chr7_2:24904272-24904291 | Msa1054010:intron | 30.0% | |
| TTTCAAATGTCCGTTTGAAA+AGG | - | chr7_2:24904313-24904332 | Msa1054010:intron | 30.0% | |
| GATTATGAAGTAACTCTCTT+AGG | + | chr7_2:24904384-24904403 | None:intergenic | 30.0% | |
| TGACAAATATGACAAGAAAG+AGG | + | chr7_2:24904471-24904490 | None:intergenic | 30.0% | |
| GCAATGTCATGCTTATATTA+CGG | - | chr7_2:24904976-24904995 | Msa1054010:intron | 30.0% | |
| GGATTCTATGTTATTGATAG+TGG | - | chr7_2:24905033-24905052 | Msa1054010:intron | 30.0% | |
| ACTAGAAAATAAGTAGCAAG+AGG | - | chr7_2:24905062-24905081 | Msa1054010:intron | 30.0% | |
| TGAGTTGTAGAAACAAAAAG+TGG | + | chr7_2:24905101-24905120 | None:intergenic | 30.0% | |
| CTTAACAGGGTAAAACAATA+TGG | + | chr7_2:24905197-24905216 | None:intergenic | 30.0% | |
| TTCTATCTTTCGTATTCTAG+AGG | + | chr7_2:24905248-24905267 | None:intergenic | 30.0% | |
| ATACGAAAGATAGAATATCG+TGG | - | chr7_2:24905253-24905272 | Msa1054010:intron | 30.0% | |
| !!! | TCTGTGCGTGTTTTTTTTTT+TGG | - | chr7_2:24905343-24905362 | Msa1054010:intron | 30.0% |
| !!! | CTGTGCGTGTTTTTTTTTTT+GGG | - | chr7_2:24905344-24905363 | Msa1054010:intron | 30.0% |
| !!! | TGTGCGTGTTTTTTTTTTTG+GGG | - | chr7_2:24905345-24905364 | Msa1054010:intron | 30.0% |
| !!! | GAAATTAGTGTGTTGTTTTC+TGG | - | chr7_2:24905533-24905552 | Msa1054010:intron | 30.0% |
| ! | TCTTTTTGTGTAAGTGGTTT+CGG | - | chr7_2:24905929-24905948 | Msa1054010:intron | 30.0% |
| TTACAGAAATCTCCGAAATT+GGG | + | chr7_2:24905957-24905976 | None:intergenic | 30.0% | |
| ATTACAGAAATCTCCGAAAT+TGG | + | chr7_2:24905958-24905977 | None:intergenic | 30.0% | |
| TTTCGGAGATTTCTGTAATT+TGG | - | chr7_2:24905959-24905978 | Msa1054010:intron | 30.0% | |
| !! | ATCAATTTTGGGAAGAAAGT+TGG | - | chr7_2:24906108-24906127 | Msa1054010:intron | 30.0% |
| ATCATTATGATGTCACTCTT+TGG | + | chr7_2:24906145-24906164 | None:intergenic | 30.0% | |
| ! | CTGCTGTACTTTTATGTTAA+AGG | - | chr7_2:24906473-24906492 | Msa1054010:intron | 30.0% |
| ! | TAAGCTGCATGATTATCTTT+TGG | - | chr7_2:24906522-24906541 | Msa1054010:intron | 30.0% |
| ! | AAGCTGCATGATTATCTTTT+GGG | - | chr7_2:24906523-24906542 | Msa1054010:intron | 30.0% |
| CAGCACAAGAATAAAAGAAC+AGG | + | chr7_2:24900706-24900725 | None:intergenic | 35.0% | |
| !! | ATTTTGTGTTTGATAGCAGG+TGG | - | chr7_2:24900893-24900912 | Msa1054010:three_prime_UTR | 35.0% |
| GGATCCTAATTCATTGAAAC+AGG | - | chr7_2:24901153-24901172 | Msa1054010:CDS | 35.0% | |
| !!! | TTTTTTGTTTGGTGAAGGAG+AGG | - | chr7_2:24901228-24901247 | Msa1054010:CDS | 35.0% |
| ! | GAAAAAAAAACGGACTCCAA+AGG | + | chr7_2:24901302-24901321 | None:intergenic | 35.0% |
| GACAATGGGAAACATATGTT+AGG | + | chr7_2:24901390-24901409 | None:intergenic | 35.0% | |
| TGACATAGTCGATAAGTTAG+AGG | - | chr7_2:24901466-24901485 | Msa1054010:intron | 35.0% | |
| ATGATATACGGTTCCTAAAG+TGG | - | chr7_2:24901613-24901632 | Msa1054010:intron | 35.0% | |
| !! | GCAAATCATGGTGTTACAAA+GGG | + | chr7_2:24901846-24901865 | None:intergenic | 35.0% |
| !! | TGCAAATCATGGTGTTACAA+AGG | + | chr7_2:24901847-24901866 | None:intergenic | 35.0% |
| !! | TTGCAGTTTTGTAGTTGTTG+TGG | - | chr7_2:24901862-24901881 | Msa1054010:intron | 35.0% |
| GTGCATTTCACATACATCTT+TGG | - | chr7_2:24902069-24902088 | Msa1054010:intron | 35.0% | |
| CGATAGATCCAATCATGAAT+TGG | - | chr7_2:24902235-24902254 | Msa1054010:intron | 35.0% | |
| !! | AAAGAGATATACTTTGAGGC+AGG | + | chr7_2:24902323-24902342 | None:intergenic | 35.0% |
| GATAATTCCAGCATACAATG+AGG | - | chr7_2:24902343-24902362 | Msa1054010:intron | 35.0% | |
| CTTACATCATAGTTTCCTCA+AGG | + | chr7_2:24902388-24902407 | None:intergenic | 35.0% | |
| !! | CTTCTTTTTCTTCTAGGAAG+GGG | + | chr7_2:24902481-24902500 | None:intergenic | 35.0% |
| GATGCACCATTTATTTGAGT+AGG | - | chr7_2:24902586-24902605 | Msa1054010:intron | 35.0% | |
| ATACTTCATAGATAGAGCAG+TGG | - | chr7_2:24902611-24902630 | Msa1054010:intron | 35.0% | |
| AGAAAAAGAGAGGAGAATAG+GGG | - | chr7_2:24902698-24902717 | Msa1054010:intron | 35.0% | |
| ATTCTAACTAACTTCCAGCT+AGG | + | chr7_2:24902731-24902750 | None:intergenic | 35.0% | |
| GCTGGAAGTTAGTTAGAATA+TGG | - | chr7_2:24902732-24902751 | Msa1054010:intron | 35.0% | |
| GGAAGTTAGTTAGAATATGG+AGG | - | chr7_2:24902735-24902754 | Msa1054010:intron | 35.0% | |
| AGTAACTATTGATAGAGCAG+AGG | + | chr7_2:24902935-24902954 | None:intergenic | 35.0% | |
| ! | AAGAATAAAGAGTGCATCCA+TGG | + | chr7_2:24903322-24903341 | None:intergenic | 35.0% |
| !! | ATTGATGATGGAAGTGTTGA+TGG | - | chr7_2:24903373-24903392 | Msa1054010:intron | 35.0% |
| !! | TTGATGATGGAAGTGTTGAT+GGG | - | chr7_2:24903374-24903393 | Msa1054010:intron | 35.0% |
| GAGTAGCTTTCGAATTTGTA+AGG | - | chr7_2:24903404-24903423 | Msa1054010:intron | 35.0% | |
| ATCCTTCTTGGAAGAAATCA+TGG | - | chr7_2:24903454-24903473 | Msa1054010:intron | 35.0% | |
| TTCTTCTTTCCTTGAAAGCA+TGG | - | chr7_2:24903589-24903608 | Msa1054010:intron | 35.0% | |
| ! | CTTGAAAGCATGGTATTACA+GGG | - | chr7_2:24903599-24903618 | Msa1054010:intron | 35.0% |
| ! | ACTTGAATCTCCATCCTTTT+TGG | + | chr7_2:24903841-24903860 | None:intergenic | 35.0% |
| AAAAAGGATGGAGATTCAAG+TGG | - | chr7_2:24903840-24903859 | Msa1054010:intron | 35.0% | |
| TGAACCAAATACAACAACAG+GGG | + | chr7_2:24903895-24903914 | None:intergenic | 35.0% | |
| GTGAACCAAATACAACAACA+GGG | + | chr7_2:24903896-24903915 | None:intergenic | 35.0% | |
| CCCATGTGTATACATCATAA+TGG | - | chr7_2:24903985-24904004 | Msa1054010:intron | 35.0% | |
| ! | CAGTGAAGCACTAAATAACA+GGG | + | chr7_2:24904170-24904189 | None:intergenic | 35.0% |
| GTGGTTTCAAGATGTTTACT+AGG | - | chr7_2:24904271-24904290 | Msa1054010:intron | 35.0% | |
| CCATATTAGAACCTATAGAC+AGG | + | chr7_2:24904548-24904567 | None:intergenic | 35.0% | |
| ! | CCTGTCTATAGGTTCTAATA+TGG | - | chr7_2:24904545-24904564 | Msa1054010:intron | 35.0% |
| CAATTGAACTCATGATTCCT+TGG | - | chr7_2:24904624-24904643 | Msa1054010:intron | 35.0% | |
| !!! | CAAGGCATTTTTTAAGGCTT+AGG | - | chr7_2:24904951-24904970 | Msa1054010:intron | 35.0% |
| TCTTAATAAATGCCTTCCCA+TGG | + | chr7_2:24905012-24905031 | None:intergenic | 35.0% | |
| !! | TGGGAAGGCATTTATTAAGA+AGG | - | chr7_2:24905012-24905031 | Msa1054010:intron | 35.0% |
| !!! | ATTTTGGTTACACGTTATGG+CGG | + | chr7_2:24905135-24905154 | None:intergenic | 35.0% |
| GGTAAAACAATATGGAGATC+AGG | + | chr7_2:24905189-24905208 | None:intergenic | 35.0% | |
| TTCGAGTAGCAAAGATTGAA+CGG | + | chr7_2:24905319-24905338 | None:intergenic | 35.0% | |
| AATTGCATTATTCTCAGACC+AGG | + | chr7_2:24905660-24905679 | None:intergenic | 35.0% | |
| TGTATGGTCACATGCAAATA+TGG | - | chr7_2:24905839-24905858 | Msa1054010:intron | 35.0% | |
| TGAGTATACCAAACATGGTT+TGG | - | chr7_2:24906013-24906032 | Msa1054010:intron | 35.0% | |
| GAGTATACCAAACATGGTTT+GGG | - | chr7_2:24906014-24906033 | Msa1054010:intron | 35.0% | |
| ! | TGAGCTGCAATGATCAATTT+TGG | - | chr7_2:24906096-24906115 | Msa1054010:intron | 35.0% |
| ! | GAGCTGCAATGATCAATTTT+GGG | - | chr7_2:24906097-24906116 | Msa1054010:intron | 35.0% |
| TCCAAACAAACCCTATGGTT+TGG | - | chr7_2:24900838-24900857 | Msa1054010:three_prime_UTR | 40.0% | |
| ! | ACCAAACCATAGGGTTTGTT+TGG | + | chr7_2:24900842-24900861 | None:intergenic | 40.0% |
| TGTGACTTTCACTGTGACTT+TGG | - | chr7_2:24900948-24900967 | Msa1054010:three_prime_UTR | 40.0% | |
| !! | TTCACTGTGACTTTGGTGTT+AGG | - | chr7_2:24900955-24900974 | Msa1054010:three_prime_UTR | 40.0% |
| !! | TCACTGTGACTTTGGTGTTA+GGG | - | chr7_2:24900956-24900975 | Msa1054010:three_prime_UTR | 40.0% |
| ! | ATGAAGGCACATTGAAGTTC+CGG | - | chr7_2:24901120-24901139 | Msa1054010:CDS | 40.0% |
| TTAGGATCCTCAAAAATCGC+CGG | + | chr7_2:24901142-24901161 | None:intergenic | 40.0% | |
| !! | TGTCTAGTCTTATCGACCTT+TGG | - | chr7_2:24901283-24901302 | Msa1054010:intron | 40.0% |
| AACTAGCAACAAAGTCGCAA+AGG | + | chr7_2:24901324-24901343 | None:intergenic | 40.0% | |
| GTGTAATCTCCTAATATGGC+TGG | - | chr7_2:24901537-24901556 | Msa1054010:intron | 40.0% | |
| !! | GTTTTGAGTCCAGCCATATT+AGG | + | chr7_2:24901549-24901568 | None:intergenic | 40.0% |
| GTAGAGATTGCAGTTGAAAG+AGG | + | chr7_2:24901943-24901962 | None:intergenic | 40.0% | |
| ! | CTAGAGTCGTTGGCATTTTA+TGG | - | chr7_2:24901975-24901994 | Msa1054010:intron | 40.0% |
| !! | GTTTTAATCCCAGTCTCAAG+AGG | - | chr7_2:24902028-24902047 | Msa1054010:intron | 40.0% |
| ATGCCTGATATGAGAACATC+AGG | + | chr7_2:24902107-24902126 | None:intergenic | 40.0% | |
| GAAGTTGAAACAGTCATAGC+AGG | - | chr7_2:24902497-24902516 | Msa1054010:intron | 40.0% | |
| TAAACATCCTCTGGCCTATT+GGG | + | chr7_2:24902657-24902676 | None:intergenic | 40.0% | |
| TACGAGCGTAAGAAAAAGAG+AGG | - | chr7_2:24902688-24902707 | Msa1054010:intron | 40.0% | |
| CAGAAGATGGTATCTTTCTG+TGG | - | chr7_2:24902805-24902824 | Msa1054010:intron | 40.0% | |
| AGACTGAGTACAGTGGATAA+TGG | + | chr7_2:24902850-24902869 | None:intergenic | 40.0% | |
| GCAGAGGAGATAATATGAAC+AGG | + | chr7_2:24902919-24902938 | None:intergenic | 40.0% | |
| ! | GGATCCTTCATTTTCATACG+AGG | - | chr7_2:24903066-24903085 | Msa1054010:intron | 40.0% |
| GGTACCTCGTATGAAAATGA+AGG | + | chr7_2:24903073-24903092 | None:intergenic | 40.0% | |
| !! | ATTTTCATACGAGGTACCTC+CGG | - | chr7_2:24903075-24903094 | Msa1054010:intron | 40.0% |
| ! | GAAATAGAGGCTGTTTCACA+TGG | + | chr7_2:24903196-24903215 | None:intergenic | 40.0% |
| AAAGTAAGGGTCATCCTTCT+TGG | - | chr7_2:24903442-24903461 | Msa1054010:intron | 40.0% | |
| TGCCATGATTTCTTCCAAGA+AGG | + | chr7_2:24903459-24903478 | None:intergenic | 40.0% | |
| TCTTGGAAGAAATCATGGCA+AGG | - | chr7_2:24903459-24903478 | Msa1054010:intron | 40.0% | |
| CTTGGAAGAAATCATGGCAA+GGG | - | chr7_2:24903460-24903479 | Msa1054010:intron | 40.0% | |
| CCTGTAATACCATGCTTTCA+AGG | + | chr7_2:24903601-24903620 | None:intergenic | 40.0% | |
| ! | CCTTGAAAGCATGGTATTAC+AGG | - | chr7_2:24903598-24903617 | Msa1054010:intron | 40.0% |
| ! | TTTTTCTAGGTCGGTGATCT+TGG | + | chr7_2:24903678-24903697 | None:intergenic | 40.0% |
| GCTAGAATCTGACAGCAAAA+CGG | + | chr7_2:24903813-24903832 | None:intergenic | 40.0% | |
| ! | GATTCTAGCTGTTGCCAAAA+AGG | - | chr7_2:24903824-24903843 | Msa1054010:intron | 40.0% |
| CGTGAACCAAATACAACAAC+AGG | + | chr7_2:24903897-24903916 | None:intergenic | 40.0% | |
| TCATCTAGAGGAGAAAGCTT+TGG | - | chr7_2:24903920-24903939 | Msa1054010:intron | 40.0% | |
| ACTTAGCTTAACATCTGCAG+AGG | - | chr7_2:24904015-24904034 | Msa1054010:intron | 40.0% | |
| CTTAACATCTGCAGAGGAAA+TGG | - | chr7_2:24904021-24904040 | Msa1054010:intron | 40.0% | |
| ! | GTTCCATCTTGTGGTTCTAT+TGG | - | chr7_2:24904067-24904086 | Msa1054010:intron | 40.0% |
| ! | GGTACTGAAATCAGAAAGCA+AGG | + | chr7_2:24904149-24904168 | None:intergenic | 40.0% |
| ! | GCAGTGAAGCACTAAATAAC+AGG | + | chr7_2:24904171-24904190 | None:intergenic | 40.0% |
| !! | ATGCTCAAGCAAAAGCATCA+AGG | + | chr7_2:24904196-24904215 | None:intergenic | 40.0% |
| TTAGCTATGCTCCTGTCTAT+AGG | - | chr7_2:24904534-24904553 | Msa1054010:intron | 40.0% | |
| CATGATTCCTTGGTCTATCT+TGG | - | chr7_2:24904634-24904653 | Msa1054010:intron | 40.0% | |
| TTATGGTCCAAGATAGACCA+AGG | + | chr7_2:24904644-24904663 | None:intergenic | 40.0% | |
| ! | CGTCAAGCAGTGTTGTTAAA+TGG | - | chr7_2:24904796-24904815 | Msa1054010:intron | 40.0% |
| ! | AGTGTTGTTAAATGGACGCA+TGG | - | chr7_2:24904804-24904823 | Msa1054010:CDS | 40.0% |
| GTAGTGGCATGTTTGTATGA+CGG | - | chr7_2:24904912-24904931 | Msa1054010:intron | 40.0% | |
| CCTTAAAAAATGCCTTGCCA+TGG | + | chr7_2:24904948-24904967 | None:intergenic | 40.0% | |
| !!! | CCATGGCAAGGCATTTTTTA+AGG | - | chr7_2:24904945-24904964 | Msa1054010:intron | 40.0% |
| CGAAAGATAGAATATCGTGG+AGG | - | chr7_2:24905256-24905275 | Msa1054010:intron | 40.0% | |
| GGAACTAGACACTAGATCAT+TGG | + | chr7_2:24905511-24905530 | None:intergenic | 40.0% | |
| TTTAGATTATCGAGGAAGCC+TGG | - | chr7_2:24905639-24905658 | Msa1054010:intron | 40.0% | |
| TGCATGTGACCATACAGAAT+AGG | + | chr7_2:24905835-24905854 | None:intergenic | 40.0% | |
| AATAGTCTGTCATTCTCTGC+AGG | - | chr7_2:24905884-24905903 | Msa1054010:intron | 40.0% | |
| CCATGTTTGGTATACTCAGA+AGG | + | chr7_2:24906011-24906030 | None:intergenic | 40.0% | |
| CCTTCTGAGTATACCAAACA+TGG | - | chr7_2:24906008-24906027 | Msa1054010:intron | 40.0% | |
| ATTGATCATTGCAGCTCATG+TGG | + | chr7_2:24906094-24906113 | None:intergenic | 40.0% | |
| TAGGACTAACCATAACCTTC+CGG | - | chr7_2:24906179-24906198 | Msa1054010:CDS | 40.0% | |
| ! | TGTTCAGATCGTGTCATTGA+GGG | - | chr7_2:24906209-24906228 | Msa1054010:CDS | 40.0% |
| ! | CAGATGCTTTTCTCAGTCAA+TGG | + | chr7_2:24906301-24906320 | None:intergenic | 40.0% |
| TGAAAATAACTCGCCAGTGT+TGG | + | chr7_2:24906395-24906414 | None:intergenic | 40.0% | |
| CAGTCGTAACATTTAGTACC+CGG | + | chr7_2:24906438-24906457 | None:intergenic | 40.0% | |
| GATAGCAGGTGGAAGCAATA+AGG | - | chr7_2:24900904-24900923 | Msa1054010:three_prime_UTR | 45.0% | |
| CAGGTGGAAGCAATAAGGAA+TGG | - | chr7_2:24900909-24900928 | Msa1054010:three_prime_UTR | 45.0% | |
| ! | TGAAGTTCCGGCGATTTTTG+AGG | - | chr7_2:24901132-24901151 | Msa1054010:CDS | 45.0% |
| ! | TTTGTTTGGTGAAGGAGAGG+AGG | - | chr7_2:24901231-24901250 | Msa1054010:CDS | 45.0% |
| ! | TTGTTTGGTGAAGGAGAGGA+GGG | - | chr7_2:24901232-24901251 | Msa1054010:CDS | 45.0% |
| CTTGTAGTCAATGAAGGGTG+TGG | - | chr7_2:24901356-24901375 | Msa1054010:intron | 45.0% | |
| TTGCGGGGTAAAACGACAAT+GGG | + | chr7_2:24901404-24901423 | None:intergenic | 45.0% | |
| TTTGCGGGGTAAAACGACAA+TGG | + | chr7_2:24901405-24901424 | None:intergenic | 45.0% | |
| TATACGGTTCCTAAAGTGGC+TGG | - | chr7_2:24901617-24901636 | Msa1054010:intron | 45.0% | |
| ! | GCATATCATCCAGCCACTTT+AGG | + | chr7_2:24901629-24901648 | None:intergenic | 45.0% |
| TGCAGTAACTTAAGCTGCTG+TGG | + | chr7_2:24901705-24901724 | None:intergenic | 45.0% | |
| TAATCCCAGTCTCAAGAGGA+AGG | - | chr7_2:24902032-24902051 | Msa1054010:intron | 45.0% | |
| AGATCCTTCCTCTTGAGACT+GGG | + | chr7_2:24902039-24902058 | None:intergenic | 45.0% | |
| CGTCCTGATGTTCTCATATC+AGG | - | chr7_2:24902101-24902120 | Msa1054010:intron | 45.0% | |
| AGGCAGGATCAACAACATGT+GGG | + | chr7_2:24902307-24902326 | None:intergenic | 45.0% | |
| ! | CAGCATACAATGAGGAGCAT+CGG | - | chr7_2:24902351-24902370 | Msa1054010:intron | 45.0% |
| !! | CTTTTTCTTCTAGGAAGGGG+AGG | + | chr7_2:24902478-24902497 | None:intergenic | 45.0% |
| CTAAACATCCTCTGGCCTAT+TGG | + | chr7_2:24902658-24902677 | None:intergenic | 45.0% | |
| ATAGGCCAGAGGATGTTTAG+TGG | - | chr7_2:24902658-24902677 | Msa1054010:intron | 45.0% | |
| TAGGCCAGAGGATGTTTAGT+GGG | - | chr7_2:24902659-24902678 | Msa1054010:intron | 45.0% | |
| ATCCACTGTACTCAGTCTCT+TGG | - | chr7_2:24902852-24902871 | Msa1054010:intron | 45.0% | |
| AACCAAGAGACTGAGTACAG+TGG | + | chr7_2:24902857-24902876 | None:intergenic | 45.0% | |
| TCTGCAACATCGTGCTTCAA+AGG | - | chr7_2:24903045-24903064 | Msa1054010:intron | 45.0% | |
| TTTCAAGAGAATGGAACCGG+AGG | + | chr7_2:24903094-24903113 | None:intergenic | 45.0% | |
| TTATCAATGGACACTCGAGC+AGG | - | chr7_2:24903342-24903361 | Msa1054010:CDS | 45.0% | |
| GCTGTGTCACATTATGCTTG+TGG | - | chr7_2:24903550-24903569 | Msa1054010:CDS | 45.0% | |
| CTAGCTGTTGCCAAAAAGGA+TGG | - | chr7_2:24903828-24903847 | Msa1054010:intron | 45.0% | |
| GACACCCCTGTTGTTGTATT+TGG | - | chr7_2:24903888-24903907 | Msa1054010:intron | 45.0% | |
| GCTTTGGCTACAGTTAAGCT+CGG | - | chr7_2:24903936-24903955 | Msa1054010:intron | 45.0% | |
| GGGAACAACAACACAGAGAA+TGG | + | chr7_2:24903968-24903987 | None:intergenic | 45.0% | |
| CAGCCAATAGAACCACAAGA+TGG | + | chr7_2:24904073-24904092 | None:intergenic | 45.0% | |
| TCCTGGAATTCGTGATACAC+AGG | - | chr7_2:24904097-24904116 | Msa1054010:intron | 45.0% | |
| ACCTGTGTATCACGAATTCC+AGG | + | chr7_2:24904101-24904120 | None:intergenic | 45.0% | |
| GACTTTGCACATTCACAGTG+TGG | - | chr7_2:24904252-24904271 | Msa1054010:intron | 45.0% | |
| ! | AGATTTTTGACAACCGCCAC+TGG | - | chr7_2:24904833-24904852 | Msa1054010:CDS | 45.0% |
| !! | ATGACGGATTCTGCTATCCA+TGG | - | chr7_2:24904928-24904947 | Msa1054010:intron | 45.0% |
| ATTACGGATTCCGCTATCCA+TGG | - | chr7_2:24904992-24905011 | Msa1054010:intron | 45.0% | |
| TTACGGATTCCGCTATCCAT+GGG | - | chr7_2:24904993-24905012 | Msa1054010:intron | 45.0% | |
| AAATGCCTTCCCATGGATAG+CGG | + | chr7_2:24905005-24905024 | None:intergenic | 45.0% | |
| GTGGTTTCGGATCCCAATTT+CGG | - | chr7_2:24905942-24905961 | Msa1054010:intron | 45.0% | |
| TGTAATTTGGTCCGAGATCC+CGG | - | chr7_2:24905972-24905991 | Msa1054010:intron | 45.0% | |
| AGAAGGTTCACCTTTGATCC+CGG | + | chr7_2:24905994-24906013 | None:intergenic | 45.0% | |
| AGAAGCTCCCAAACCATGTT+TGG | + | chr7_2:24906024-24906043 | None:intergenic | 45.0% | |
| AGCTTCTGCTCATGTCTGTT+GGG | - | chr7_2:24906037-24906056 | Msa1054010:CDS | 45.0% | |
| ATGTCTGTTGGGTACAGGAT+CGG | - | chr7_2:24906048-24906067 | Msa1054010:CDS | 45.0% | |
| TTGGGTACAGGATCGGTATA+TGG | - | chr7_2:24906055-24906074 | Msa1054010:CDS | 45.0% | |
| ACGATCTGAACAGCACAATC+CGG | + | chr7_2:24906201-24906220 | None:intergenic | 45.0% | |
| ! | CTGTTCAGATCGTGTCATTG+AGG | - | chr7_2:24906208-24906227 | Msa1054010:CDS | 45.0% |
| ! | AGATCGTGTCATTGAGGGTT+TGG | - | chr7_2:24906214-24906233 | Msa1054010:CDS | 45.0% |
| ! | GATCGTGTCATTGAGGGTTT+GGG | - | chr7_2:24906215-24906234 | Msa1054010:CDS | 45.0% |
| GCTTTCTGTGCTCATCATTC+CGG | - | chr7_2:24906416-24906435 | Msa1054010:intron | 45.0% | |
| CTTTCTGTGCTCATCATTCC+GGG | - | chr7_2:24906417-24906436 | Msa1054010:intron | 45.0% | |
| TTACGACTGTCTGTACTCTG+TGG | - | chr7_2:24906449-24906468 | Msa1054010:intron | 45.0% | |
| !! | TAAAAAAAAAAAATGATATA+CGG | - | chr7_2:24901601-24901620 | Msa1054010:intron | 5.0% |
| CTAGCGATTTGCGATTCTGG+TGG | + | chr7_2:24900643-24900662 | None:intergenic | 50.0% | |
| CTGCTAGCGATTTGCGATTC+TGG | + | chr7_2:24900646-24900665 | None:intergenic | 50.0% | |
| CAGAATCGCAAATCGCTAGC+AGG | - | chr7_2:24900644-24900663 | Msa1054010:three_prime_UTR | 50.0% | |
| ! | CAATGAAGGGTGTGGAGACA+TGG | - | chr7_2:24901364-24901383 | Msa1054010:intron | 50.0% |
| CAGATCCTTCCTCTTGAGAC+TGG | + | chr7_2:24902040-24902059 | None:intergenic | 50.0% | |
| ATGAGAACATCAGGACGCAC+AGG | + | chr7_2:24902098-24902117 | None:intergenic | 50.0% | |
| GGATCAACAACATGTGGGCA+AGG | + | chr7_2:24902302-24902321 | None:intergenic | 50.0% | |
| GAGGCAGGATCAACAACATG+TGG | + | chr7_2:24902308-24902327 | None:intergenic | 50.0% | |
| CGATGCTCCTCATTGTATGC+TGG | + | chr7_2:24902353-24902372 | None:intergenic | 50.0% | |
| !! | ATAGTTTCCTCAAGGGCACC+AGG | + | chr7_2:24902380-24902399 | None:intergenic | 50.0% |
| ATAGCAGGCAGTCGACGAAA+GGG | - | chr7_2:24902512-24902531 | Msa1054010:intron | 50.0% | |
| !! | CAGTTGATAGGACGCCCAAT+AGG | - | chr7_2:24902640-24902659 | Msa1054010:intron | 50.0% |
| TGAGCCCACTAAACATCCTC+TGG | + | chr7_2:24902666-24902685 | None:intergenic | 50.0% | |
| AAGAGAGGAGAATAGGGGAG+AGG | - | chr7_2:24902703-24902722 | Msa1054010:intron | 50.0% | |
| TTGAGTGGAGGAGCAGAAGA+TGG | - | chr7_2:24902792-24902811 | Msa1054010:intron | 50.0% | |
| CAGGGAATGTTACACTCACG+CGG | - | chr7_2:24903617-24903636 | Msa1054010:intron | 50.0% | |
| CTTCTCATGCTTGACGCAGA+TGG | - | chr7_2:24903647-24903666 | Msa1054010:intron | 50.0% | |
| TGGTTCACGAGCTCATCTAG+AGG | - | chr7_2:24903908-24903927 | Msa1054010:intron | 50.0% | |
| GATGAAGGGGTTCCATCTTG+TGG | - | chr7_2:24904058-24904077 | Msa1054010:intron | 50.0% | |
| ! | CTTGTGGTTCTATTGGCTGC+TGG | - | chr7_2:24904074-24904093 | Msa1054010:intron | 50.0% |
| TGTTTACTAGGGCTGCAGCT+AGG | - | chr7_2:24904283-24904302 | Msa1054010:intron | 50.0% | |
| TGTTAAATGGACGCATGGCG+TGG | - | chr7_2:24904809-24904828 | Msa1054010:CDS | 50.0% | |
| CTTCACAAATTGGCCAGTGG+CGG | + | chr7_2:24904849-24904868 | None:intergenic | 50.0% | |
| GCCACTGGCCAATTTGTGAA+GGG | - | chr7_2:24904848-24904867 | Msa1054010:CDS | 50.0% | |
| TCCCTTCACAAATTGGCCAG+TGG | + | chr7_2:24904852-24904871 | None:intergenic | 50.0% | |
| TATGATGCCGCAATGTGGTG+GGG | + | chr7_2:24904888-24904907 | None:intergenic | 50.0% | |
| CTATGATGCCGCAATGTGGT+GGG | + | chr7_2:24904889-24904908 | None:intergenic | 50.0% | |
| GGATTCTGCTATCCATGGCA+AGG | - | chr7_2:24904933-24904952 | Msa1054010:intron | 50.0% | |
| AGTCTGTCATTCTCTGCAGG+TGG | - | chr7_2:24905887-24905906 | Msa1054010:intron | 50.0% | |
| GTAATTTGGTCCGAGATCCC+GGG | - | chr7_2:24905973-24905992 | Msa1054010:intron | 50.0% | |
| GAAGGTTCACCTTTGATCCC+GGG | + | chr7_2:24905993-24906012 | None:intergenic | 50.0% | |
| GAGCTTCTGCTCATGTCTGT+TGG | - | chr7_2:24906036-24906055 | Msa1054010:CDS | 50.0% | |
| TGCTCATGTCTGTTGGGTAC+AGG | - | chr7_2:24906043-24906062 | Msa1054010:CDS | 50.0% | |
| CAGCACAATCCGGAAGGTTA+TGG | + | chr7_2:24906191-24906210 | None:intergenic | 50.0% | |
| TCTGAACAGCACAATCCGGA+AGG | + | chr7_2:24906197-24906216 | None:intergenic | 50.0% | |
| !! | AATGAGGAGCATCGGCTTCC+TGG | - | chr7_2:24902359-24902378 | Msa1054010:intron | 55.0% |
| CATAGCAGGCAGTCGACGAA+AGG | - | chr7_2:24902511-24902530 | Msa1054010:intron | 55.0% | |
| CAGTGGTGCGTGCAGTTGAT+AGG | - | chr7_2:24902628-24902647 | Msa1054010:intron | 55.0% | |
| ! | GTTCTATTGGCTGCTGGTCC+TGG | - | chr7_2:24904080-24904099 | Msa1054010:intron | 55.0% |
| CGCCACTGGCCAATTTGTGA+AGG | - | chr7_2:24904847-24904866 | Msa1054010:CDS | 55.0% | |
| GGGGGGATCCCTTCACAAAT+TGG | + | chr7_2:24904859-24904878 | None:intergenic | 55.0% | |
| ATGATGCCGCAATGTGGTGG+GGG | + | chr7_2:24904887-24904906 | None:intergenic | 55.0% | |
| CCTATGATGCCGCAATGTGG+TGG | + | chr7_2:24904890-24904909 | None:intergenic | 55.0% | |
| CCACCACATTGCGGCATCAT+AGG | - | chr7_2:24904887-24904906 | Msa1054010:intron | 55.0% | |
| CAGCCTATGATGCCGCAATG+TGG | + | chr7_2:24904893-24904912 | None:intergenic | 55.0% | |
| TGCGGCATCATAGGCTGTAG+TGG | - | chr7_2:24904896-24904915 | Msa1054010:intron | 55.0% | |
| GGATTCCGCTATCCATGGGA+AGG | - | chr7_2:24904997-24905016 | Msa1054010:intron | 55.0% | |
| ! | CACGTTATGGCGGAGAAGCT+AGG | + | chr7_2:24905125-24905144 | None:intergenic | 55.0% |
| CACCTTTGATCCCGGGATCT+CGG | + | chr7_2:24905986-24906005 | None:intergenic | 55.0% | |
| CATCGCAAACGGCAAGCAGC+AGG | - | chr7_2:24900598-24900617 | Msa1054010:three_prime_UTR | 60.0% | |
| TAGGACGCCCAATAGGCCAG+AGG | - | chr7_2:24902647-24902666 | Msa1054010:intron | 60.0% | |
| !! | ATAGGGGAGAGGTGCCTAGC+TGG | - | chr7_2:24902714-24902733 | Msa1054010:intron | 60.0% |
| ! | TGATGCCGCAATGTGGTGGG+GGG | + | chr7_2:24904886-24904905 | None:intergenic | 60.0% |
| GTCCGAGATCCCGGGATCAA+AGG | - | chr7_2:24905981-24906000 | Msa1054010:intron | 60.0% | |
| TCGGCTTCCTGGTGCCCTTG+AGG | - | chr7_2:24902370-24902389 | Msa1054010:intron | 65.0% | |
| ! | ATGCCGCAATGTGGTGGGGG+GGG | + | chr7_2:24904884-24904903 | None:intergenic | 65.0% |
| ! | GATGCCGCAATGTGGTGGGG+GGG | + | chr7_2:24904885-24904904 | None:intergenic | 65.0% |
| ! | TGCCGCAATGTGGTGGGGGG+GGG | + | chr7_2:24904883-24904902 | None:intergenic | 70.0% |
| ! | AATGTGGTGGGGGGGGGGGG+GGG | + | chr7_2:24904877-24904896 | None:intergenic | 75.0% |
| ! | CAATGTGGTGGGGGGGGGGG+GGG | + | chr7_2:24904878-24904897 | None:intergenic | 75.0% |
| ! | GCAATGTGGTGGGGGGGGGG+GGG | + | chr7_2:24904879-24904898 | None:intergenic | 75.0% |
| ! | CGCAATGTGGTGGGGGGGGG+GGG | + | chr7_2:24904880-24904899 | None:intergenic | 75.0% |
| ! | CCGCAATGTGGTGGGGGGGG+GGG | + | chr7_2:24904881-24904900 | None:intergenic | 75.0% |
| CCCCCCCCCCCACCACATTG+CGG | - | chr7_2:24904878-24904897 | Msa1054010:CDS | 75.0% | |
| ! | GCCGCAATGTGGTGGGGGGG+GGG | + | chr7_2:24904882-24904901 | None:intergenic | 75.0% |
| !! | ATGTGGTGGGGGGGGGGGGG+GGG | + | chr7_2:24904876-24904895 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 24900590 | 24906610 | 24900590 | ID=Msa1054010;Name=Msa1054010 |
| chr7_2 | mRNA | 24900590 | 24906610 | 24900590 | ID=Msa1054010-mRNA-1;Parent=Msa1054010;Name=Msa1054010-mRNA-1;_AED=0.11;_eAED=0.11;_QI=100|0.81|0.91|0.91|0.90|0.83|12|512|361 |
| chr7_2 | exon | 24900590 | 24901294 | 24900590 | ID=Msa1054010-mRNA-1:exon:5399;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24902866 | 24902930 | 24902866 | ID=Msa1054010-mRNA-1:exon:5398;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24903082 | 24903165 | 24903082 | ID=Msa1054010-mRNA-1:exon:5397;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24903253 | 24903375 | 24903253 | ID=Msa1054010-mRNA-1:exon:5396;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24903491 | 24903580 | 24903491 | ID=Msa1054010-mRNA-1:exon:5395;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24903702 | 24903836 | 24903702 | ID=Msa1054010-mRNA-1:exon:5394;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24904113 | 24904158 | 24904113 | ID=Msa1054010-mRNA-1:exon:5393;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24904798 | 24904904 | 24904798 | ID=Msa1054010-mRNA-1:exon:5392;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24905067 | 24905159 | 24905067 | ID=Msa1054010-mRNA-1:exon:5391;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24906026 | 24906074 | 24906026 | ID=Msa1054010-mRNA-1:exon:5390;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24906172 | 24906288 | 24906172 | ID=Msa1054010-mRNA-1:exon:5389;Parent=Msa1054010-mRNA-1 |
| chr7_2 | exon | 24906527 | 24906610 | 24906527 | ID=Msa1054010-mRNA-1:exon:5388;Parent=Msa1054010-mRNA-1 |
| chr7_2 | five_prime_UTR | 24906527 | 24906610 | 24906527 | ID=Msa1054010-mRNA-1:five_prime_utr;Parent=Msa1054010-mRNA-1 |
| chr7_2 | five_prime_UTR | 24906273 | 24906288 | 24906273 | ID=Msa1054010-mRNA-1:five_prime_utr;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24906172 | 24906272 | 24906172 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24906026 | 24906074 | 24906026 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24905067 | 24905159 | 24905067 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24904798 | 24904904 | 24904798 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24904113 | 24904158 | 24904113 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24903702 | 24903836 | 24903702 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24903491 | 24903580 | 24903491 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24903253 | 24903375 | 24903253 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24903082 | 24903165 | 24903082 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24902866 | 24902930 | 24902866 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | CDS | 24901102 | 24901294 | 24901102 | ID=Msa1054010-mRNA-1:cds;Parent=Msa1054010-mRNA-1 |
| chr7_2 | three_prime_UTR | 24900590 | 24901101 | 24900590 | ID=Msa1054010-mRNA-1:three_prime_utr;Parent=Msa1054010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
