AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206160 MtrunA17_Chr4g0055241 97.214 359 10 0 1 359 1 359 0.0 714
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206160 AT1G32730.1 45.533 347 157 7 18 359 8 327 6.70e-90 273

Find 94 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGTACCTTTCTAGTTAA+TGG 0.160561 8_1:+63035943 None:intergenic
TCTGAGGACCCAACCAATTT+TGG 0.167134 8_1:+63035242 None:intergenic
TTGTTCTTTATGCGTGTTTA+TGG 0.188552 8_1:-63042640 Msa1206160:exon
GGATTACTCGTTACCAAAAT+TGG 0.199926 8_1:-63035255 Msa1206160:CDS
CCATTGTTATTGCCTAATTC+TGG 0.271376 8_1:-63034849 Msa1206160:three_prime_UTR
CAATTTGATTTGAAAATTGA+TGG 0.274942 8_1:-63034644 Msa1206160:three_prime_UTR
TTCTGACCGCGTTGAGATTT+CGG 0.292064 8_1:+63042540 None:intergenic
TGTAGAATTCTGCCAGAATT+AGG 0.320836 8_1:+63034837 None:intergenic
CTAACGCAAATTATGATATA+TGG 0.325174 8_1:-63034705 Msa1206160:three_prime_UTR
CATGCAAAATGTAGATTTGC+TGG 0.332643 8_1:-63035738 Msa1206160:CDS
ATCAGCTATAAGTGATCTTC+TGG 0.345352 8_1:-63035441 Msa1206160:CDS
CGCGTGCGAGCGTTGGGTTT+CGG 0.356084 8_1:+63042866 None:intergenic
TACTTGTAACTTACATTGAC+GGG 0.360139 8_1:+63040669 None:intergenic
CTCCTTGTATTCCTTTAACT+TGG 0.360826 8_1:+63035799 None:intergenic
CTGCAAATCCTCCTCACTTC+GGG 0.374251 8_1:+63035403 None:intergenic
CAAAATCCTTGTCCGATTCA+TGG 0.380244 8_1:-63042353 Msa1206160:intron
CGATGAAGCCACCGGTGAAT+TGG 0.381077 8_1:+63042566 None:intergenic
ATTGAACTGAGCAAAACTAT+TGG 0.381132 8_1:+63035996 None:intergenic
CAACTCTTGCATTGCTCATA+AGG 0.383564 8_1:+63042389 None:intergenic
GTGGCAATGTTGCTCGTTCT+AGG 0.384329 8_1:-63042497 Msa1206160:intron
CCTGACAACACTCCATCTTC+TGG 0.385227 8_1:-63040728 Msa1206160:CDS
GGTTTCGGTTCTTAAGAAGC+TGG 0.394698 8_1:+63042881 None:intergenic
ATGCTGTATCGTATTATTCA+AGG 0.411377 8_1:-63035100 Msa1206160:three_prime_UTR
TGTTGTACCAGCAAAAGAAT+TGG 0.415028 8_1:-63035276 Msa1206160:CDS
ACTCTGATACATCCAATTGC+AGG 0.415325 8_1:-63034812 Msa1206160:three_prime_UTR
CAAACAATGTCTCTAAAATC+AGG 0.416866 8_1:-63035038 Msa1206160:three_prime_UTR
ATAAACAAGATCCCTGCAAT+TGG 0.436957 8_1:+63034800 None:intergenic
CTGGGTTAAAATTGCAACTA+AGG 0.442245 8_1:-63035622 Msa1206160:CDS
CCAGAAGATGGAGTGTTGTC+AGG 0.449973 8_1:+63040728 None:intergenic
AACAATGAGGTAATGATCCC+TGG 0.455916 8_1:-63035641 Msa1206160:CDS
ACTCGTTACCAAAATTGGTT+GGG 0.456983 8_1:-63035250 Msa1206160:CDS
CAATTCACCGGTGGCTTCAT+CGG 0.463160 8_1:-63042565 Msa1206160:CDS
TGCTATGGAAAATTAGAGTT+AGG 0.463701 8_1:-63035073 Msa1206160:three_prime_UTR
AAGCTCAAGTCTGCTGTAGA+TGG 0.465375 8_1:-63035533 Msa1206160:CDS
GTTTCGGTTCTTAAGAAGCT+GGG 0.473370 8_1:+63042882 None:intergenic
ATACTTGTAACTTACATTGA+CGG 0.473704 8_1:+63040668 None:intergenic
TACTCGTTACCAAAATTGGT+TGG 0.478001 8_1:-63035251 Msa1206160:CDS
TTGCCACACTGTTTGCACTT+AGG 0.478682 8_1:+63042513 None:intergenic
CTCGCACGCGGTTAAGCAAA+GGG 0.479079 8_1:-63042853 Msa1206160:five_prime_UTR
GGAGGATTTGCAGTCATGCT+TGG 0.486799 8_1:-63035393 Msa1206160:CDS
TTCGCCGTTGAATTGTTGCT+CGG 0.492476 8_1:+63042609 None:intergenic
AATCTTCGAATAAGAGAAAG+AGG 0.496068 8_1:-63035475 Msa1206160:CDS
AAAGAAGCCATTAACTAGAA+AGG 0.500723 8_1:-63035950 Msa1206160:intron
TTCCAAGTTAAAGGAATACA+AGG 0.503227 8_1:-63035801 Msa1206160:CDS
GAAGTATCACTGGTTCAGTT+CGG 0.510515 8_1:-63034902 Msa1206160:three_prime_UTR
AAAATTAGAGTTAGGCAAAA+CGG 0.513095 8_1:-63035065 Msa1206160:three_prime_UTR
CGGTGAATTGGTTAGACCTA+GGG 0.515322 8_1:+63042578 None:intergenic
ACTGCAAATCCTCCTCACTT+CGG 0.516635 8_1:+63035402 None:intergenic
AACAATTCAACGGCGAAAGT+CGG 0.518604 8_1:-63042603 Msa1206160:CDS
ATTATTCAAGGAAAATGCTA+TGG 0.521553 8_1:-63035088 Msa1206160:three_prime_UTR
GAGCCAAACTGACCATGAAT+CGG 0.522883 8_1:+63042341 None:intergenic
TTTGAAAATTGATGGCTTCG+TGG 0.525257 8_1:-63034636 None:intergenic
GCTCGCACGCGGTTAAGCAA+AGG 0.525283 8_1:-63042854 Msa1206160:five_prime_UTR
AGTGGGGCAGCACCAGAAGA+TGG 0.528171 8_1:+63040716 None:intergenic
TACCTCATTGTTCTCTGTCG+AGG 0.532314 8_1:+63035652 None:intergenic
ACGGCGAAAGTCGGAACCCT+AGG 0.532431 8_1:-63042594 Msa1206160:CDS
TCAGTTGATTCGAAGAAAGT+AGG 0.535270 8_1:+63042705 None:intergenic
GGATTTGCAGTCATGCTTGG+AGG 0.551796 8_1:-63035390 Msa1206160:CDS
CCGGTGAATTGGTTAGACCT+AGG 0.552174 8_1:+63042577 None:intergenic
ATGCTGCAGCTATCAATGAA+TGG 0.555763 8_1:-63035829 Msa1206160:CDS
TCATTGTTCTCTGTCGAGGT+AGG 0.556432 8_1:+63035656 None:intergenic
GATTCGAAAAGAAGTATCAC+TGG 0.562421 8_1:-63034912 Msa1206160:three_prime_UTR
GAGAATGTAGAGCAGTTATG+AGG 0.563614 8_1:-63035170 Msa1206160:exon
ACTAATGACGACTTCATCAC+AGG 0.583106 8_1:+63034875 None:intergenic
AGTGTTGTCAGGAATTGTAC+TGG 0.583392 8_1:+63040739 None:intergenic
CTCTGATACATCCAATTGCA+GGG 0.585105 8_1:-63034811 Msa1206160:three_prime_UTR
TATCACTGGTTCAGTTCGGA+TGG 0.593357 8_1:-63034898 Msa1206160:three_prime_UTR
TCAAACTCGACGAGAAGTGA+TGG 0.595013 8_1:-63035599 Msa1206160:CDS
CCTAGGTCTAACCAATTCAC+CGG 0.595091 8_1:-63042577 Msa1206160:CDS
ACAATGAGGTAATGATCCCT+GGG 0.596258 8_1:-63035640 Msa1206160:CDS
TGAGGATGTGTCTTCTGCAT+CGG 0.596526 8_1:-63035687 Msa1206160:CDS
TTTATGCGTGTTTATGGCGA+CGG 0.597303 8_1:-63042634 Msa1206160:exon
TTCAGACGAAGACTCTGCTA+TGG 0.603260 8_1:-63035348 Msa1206160:CDS
CATCAGAATCAAACTGCTGA+AGG 0.604583 8_1:-63035302 Msa1206160:CDS
AGTTTCTTGATCAATTTCTG+AGG 0.608221 8_1:+63035226 None:intergenic
TTCGGCGCCGATGAAGCCAC+CGG 0.612425 8_1:+63042558 None:intergenic
GGCACCGAGCAACAATTCAA+CGG 0.620139 8_1:-63042613 Msa1206160:CDS
ATCTGTGAAGCATTCAGATG+AGG 0.622176 8_1:-63035705 Msa1206160:CDS
CGAAACCCAACGCTCGCACG+CGG 0.627920 8_1:-63042865 Msa1206160:five_prime_UTR
TTTCGGTTCTTAAGAAGCTG+GGG 0.628082 8_1:+63042883 None:intergenic
TTCGGTTCTTAAGAAGCTGG+GGG 0.629316 8_1:+63042884 None:intergenic
TAACAAAGCCCGAAGTGAGG+AGG 0.633319 8_1:-63035411 Msa1206160:CDS
CAAGGAGCGAAATGTTGAAG+CGG 0.634300 8_1:-63035783 Msa1206160:CDS
GGATGTGTCTTCTGCATCGG+AGG 0.640331 8_1:-63035684 Msa1206160:CDS
ACTTGTAACTTACATTGACG+GGG 0.642253 8_1:+63040670 None:intergenic
AATTAACAAAGCCCGAAGTG+AGG 0.646396 8_1:-63035414 Msa1206160:CDS
CCAGAATTAGGCAATAACAA+TGG 0.660725 8_1:+63034849 None:intergenic
AACTGACCATGAATCGGACA+AGG 0.662088 8_1:+63042347 None:intergenic
AGGTCTAACCAATTCACCGG+TGG 0.674249 8_1:-63042574 Msa1206160:CDS
CTTGTAACTTACATTGACGG+GGG 0.680304 8_1:+63040671 None:intergenic
CTGCAGCTATCAATGAATGG+AGG 0.684130 8_1:-63035826 Msa1206160:CDS
AAACCTAAGTGCAAACAGTG+TGG 0.715094 8_1:-63042516 Msa1206160:CDS
TACCTCGACAGAGAACAATG+AGG 0.769377 8_1:-63035654 Msa1206160:CDS
TCGGCGCCGAAATCTCAACG+CGG 0.850645 8_1:-63042546 Msa1206160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGTAAAAATTAATG+GGG + chr8_1:63034802-63034821 None:intergenic 10.0%
!! GAAAAATAGTAAAAATTAAT+GGG + chr8_1:63034803-63034822 None:intergenic 10.0%
!!! TGATTTTTTATTTTATTTTC+AGG - chr8_1:63035112-63035131 Msa1206160:three_prime_UTR 10.0%
!! TCTTTATTGAAAAATAAATT+TGG - chr8_1:63036974-63036993 Msa1206160:intron 10.0%
!!! ATTTTTTGTATTATTTGATT+TGG - chr8_1:63037204-63037223 Msa1206160:intron 10.0%
!!! TTTTTTCAAAAATCATATAA+AGG + chr8_1:63038619-63038638 None:intergenic 10.0%
!!! TATGTTTAAATGAAATTTTA+GGG + chr8_1:63038642-63038661 None:intergenic 10.0%
!!! TTTATTTTGATGAAATTGTA+GGG + chr8_1:63034767-63034786 None:intergenic 15.0%
!!! TTTTATTTTGATGAAATTGT+AGG + chr8_1:63034768-63034787 None:intergenic 15.0%
!! AAAATAGTAAAAATTAATGG+GGG + chr8_1:63034801-63034820 None:intergenic 15.0%
!! GGAAAAATAGTAAAAATTAA+TGG + chr8_1:63034804-63034823 None:intergenic 15.0%
!!! ATTCAGTATTATTTTTGTTT+TGG - chr8_1:63036091-63036110 Msa1206160:intron 15.0%
!!! TAGCTTATATATTTTGAAAT+TGG - chr8_1:63036474-63036493 Msa1206160:intron 15.0%
!! ATGAATATGATATAAATGTA+GGG + chr8_1:63036890-63036909 None:intergenic 15.0%
!! AATGAATATGATATAAATGT+AGG + chr8_1:63036891-63036910 None:intergenic 15.0%
!! TATTGAAAAATAAATTTGGT+TGG - chr8_1:63036978-63036997 Msa1206160:intron 15.0%
!! TTTACAATAACTTGATTTAT+TGG + chr8_1:63037887-63037906 None:intergenic 15.0%
!!! GTATGTTTAAATGAAATTTT+AGG + chr8_1:63038643-63038662 None:intergenic 15.0%
!! AAAATTTCATTTAAACATAC+CGG - chr8_1:63038643-63038662 Msa1206160:intron 15.0%
!! AATAAAAAAACTAAGCATAT+AGG - chr8_1:63041032-63041051 Msa1206160:intron 15.0%
!! ATAAAAAAACTAAGCATATA+GGG - chr8_1:63041033-63041052 Msa1206160:intron 15.0%
!! GAAAAATTTGAAGGAAAAAT+GGG + chr8_1:63034726-63034745 None:intergenic 20.0%
!! AGAAAAATTTGAAGGAAAAA+TGG + chr8_1:63034727-63034746 None:intergenic 20.0%
!! AATCAAAGTTTGAAAGAAAA+AGG + chr8_1:63035063-63035082 None:intergenic 20.0%
!! ATATATATTTGAATCCTTGA+TGG - chr8_1:63035303-63035322 Msa1206160:CDS 20.0%
!!! AAATAATTTGTATTGTGCAA+TGG + chr8_1:63035683-63035702 None:intergenic 20.0%
!! AAAGTTTCAAATCATAAACA+AGG + chr8_1:63036049-63036068 None:intergenic 20.0%
!!! AGTATTATTTTTGTTTTGGT+AGG - chr8_1:63036095-63036114 Msa1206160:intron 20.0%
!!! TTCTACTCAATTAATTTTGT+AGG + chr8_1:63036177-63036196 None:intergenic 20.0%
!! TATCTTAATTACTATTACTC+TGG + chr8_1:63036421-63036440 None:intergenic 20.0%
!!! TCTTGAATTCTTTTATTTGA+CGG - chr8_1:63036525-63036544 Msa1206160:intron 20.0%
!!! TCACTAAAATTTTGGAATTT+AGG - chr8_1:63037290-63037309 Msa1206160:intron 20.0%
!!! CACTAAAATTTTGGAATTTA+GGG - chr8_1:63037291-63037310 Msa1206160:intron 20.0%
!!! AACTTTAAAGTATCAAGATT+TGG + chr8_1:63038168-63038187 None:intergenic 20.0%
!!! ATACTTTAAAGTTAGTAACA+TGG - chr8_1:63038175-63038194 Msa1206160:intron 20.0%
!!! TACTTTAAAGTTAGTAACAT+GGG - chr8_1:63038176-63038195 Msa1206160:intron 20.0%
!! AAATTTCATTTAAACATACC+GGG - chr8_1:63038644-63038663 Msa1206160:intron 20.0%
!!! GTTTTTGACATGTTATTTTA+GGG + chr8_1:63038947-63038966 None:intergenic 20.0%
!!! TGTTTTTGACATGTTATTTT+AGG + chr8_1:63038948-63038967 None:intergenic 20.0%
!!! TTGACTTTTTTAAATCACAT+TGG + chr8_1:63039296-63039315 None:intergenic 20.0%
!! GTTTATTAATTAAGTAACTG+TGG - chr8_1:63039391-63039410 Msa1206160:intron 20.0%
!!! AACAAGGTTTTATATATACA+GGG + chr8_1:63041063-63041082 None:intergenic 20.0%
!! TAAAACTGAAAGAGTAATAA+AGG + chr8_1:63041138-63041157 None:intergenic 20.0%
!!! AATGGAATGAAATTTTTGAA+AGG - chr8_1:63041340-63041359 Msa1206160:intron 20.0%
!!! ATGGAATGAAATTTTTGAAA+GGG - chr8_1:63041341-63041360 Msa1206160:intron 20.0%
!! ATAAAAAAAACTGTAGATGA+TGG - chr8_1:63041964-63041983 Msa1206160:intron 20.0%
!!! CAATTTGATTTGAAAATTGA+TGG - chr8_1:63042883-63042902 Msa1206160:five_prime_UTR 20.0%
!! ATTGTAGGGTTAATCTTTTT+GGG + chr8_1:63034753-63034772 None:intergenic 25.0%
!! AATTGTAGGGTTAATCTTTT+TGG + chr8_1:63034754-63034773 None:intergenic 25.0%
!! AATTTTCGTTTTCGTTTCAA+CGG + chr8_1:63034866-63034885 None:intergenic 25.0%
! GCTGAAATGTTGAAATTTAA+TGG - chr8_1:63035350-63035369 Msa1206160:CDS 25.0%
!!! AATTATTTTACCGTTACGTT+AGG - chr8_1:63035420-63035439 Msa1206160:CDS 25.0%
! TGAAATTTAACCTAACGTAA+CGG + chr8_1:63035433-63035452 None:intergenic 25.0%
!! GCAAGATAGAGAATTTTTAT+TGG - chr8_1:63035512-63035531 Msa1206160:CDS 25.0%
!!! TGTTTTCATGTTATTTCACA+GGG + chr8_1:63035914-63035933 None:intergenic 25.0%
!!! ATGTTTTCATGTTATTTCAC+AGG + chr8_1:63035915-63035934 None:intergenic 25.0%
! TAACATGAAAACATGAAATC+AGG - chr8_1:63035921-63035940 Msa1206160:intron 25.0%
!! TATGTTTAGGATTTGAGATT+TGG - chr8_1:63036014-63036033 Msa1206160:CDS 25.0%
!! TTATGATTTGAAACTTTGAG+TGG - chr8_1:63036052-63036071 Msa1206160:intron 25.0%
!! TTAATTTTGTAGGATCTAGA+GGG + chr8_1:63036167-63036186 None:intergenic 25.0%
!! ATTAATTTTGTAGGATCTAG+AGG + chr8_1:63036168-63036187 None:intergenic 25.0%
!!! TTGTATTTTCCTGTTTCTTT+TGG - chr8_1:63036340-63036359 Msa1206160:intron 25.0%
!!! CTATTACTCTGGAATAAAAA+AGG + chr8_1:63036410-63036429 None:intergenic 25.0%
! GTAATGTAACACAAAAAAGA+TGG - chr8_1:63036614-63036633 Msa1206160:intron 25.0%
! GATATTGTAAATCTTGCAAA+AGG + chr8_1:63036663-63036682 None:intergenic 25.0%
! ATACTTGTAACTTACATTGA+CGG + chr8_1:63036862-63036881 None:intergenic 25.0%
!!! CAAATAAACCTTTGAAACTT+TGG + chr8_1:63037138-63037157 None:intergenic 25.0%
! TTTATTTGTCTCAAACTCTA+CGG - chr8_1:63037150-63037169 Msa1206160:intron 25.0%
!! TATACCAGTCACTAAAATTT+TGG - chr8_1:63037282-63037301 Msa1206160:intron 25.0%
!!! AATTCCAAAATTTTAGTGAC+TGG + chr8_1:63037289-63037308 None:intergenic 25.0%
! CGTATTACATAAACCATAAA+TGG + chr8_1:63037318-63037337 None:intergenic 25.0%
! ATTGCTAAATTCTATTGCAT+AGG + chr8_1:63037434-63037453 None:intergenic 25.0%
! ATTATGACAAAAAACAGTAG+TGG - chr8_1:63037729-63037748 Msa1206160:intron 25.0%
! ACAATAACTTGATTTATTGG+TGG + chr8_1:63037884-63037903 None:intergenic 25.0%
!!! AATTTGGTTTTCAGTAAACA+AGG + chr8_1:63038066-63038085 None:intergenic 25.0%
! TTTACTGAAAACCAAATTTC+AGG - chr8_1:63038068-63038087 Msa1206160:intron 25.0%
! TGTTGAATTGCTGAAAAAAT+GGG + chr8_1:63038688-63038707 None:intergenic 25.0%
! ATGTTGAATTGCTGAAAAAA+TGG + chr8_1:63038689-63038708 None:intergenic 25.0%
!!! TTTAGGGTTTTCTTTAATGA+CGG + chr8_1:63038931-63038950 None:intergenic 25.0%
! AAAAAAGTTGTAGAACAAAG+TGG + chr8_1:63039241-63039260 None:intergenic 25.0%
! TATATGTCAATTTGTGAATC+TGG - chr8_1:63039451-63039470 Msa1206160:intron 25.0%
! TAAACTGATGAATCATAACA+AGG + chr8_1:63039491-63039510 None:intergenic 25.0%
!! ACATGATTTGTAAGTTTGTA+TGG - chr8_1:63040032-63040051 Msa1206160:intron 25.0%
!!! AACTATTTTTAATTCCTTGC+TGG - chr8_1:63040145-63040164 Msa1206160:intron 25.0%
! AGTTTCACAATATTCTCATA+AGG + chr8_1:63040311-63040330 None:intergenic 25.0%
! TAATATTTGAATCGAAGTCA+TGG + chr8_1:63040462-63040481 None:intergenic 25.0%
!! TAAGGTCTCTTTTTATCATT+TGG + chr8_1:63040808-63040827 None:intergenic 25.0%
!! CAGGAACAATAATTTTTGTA+AGG + chr8_1:63040826-63040845 None:intergenic 25.0%
! ATTATTGTTCCTGATACAAA+TGG - chr8_1:63040833-63040852 Msa1206160:intron 25.0%
!!! CAACAAGGTTTTATATATAC+AGG + chr8_1:63041064-63041083 None:intergenic 25.0%
! ATCCAATGTTTAAATAAGAG+AGG - chr8_1:63041231-63041250 Msa1206160:intron 25.0%
!! TTCCTCTCTTATTTAAACAT+TGG + chr8_1:63041236-63041255 None:intergenic 25.0%
! GTAAAATAATCAAGTGTACT+CGG - chr8_1:63041303-63041322 Msa1206160:intron 25.0%
! TAAAATAATCAAGTGTACTC+GGG - chr8_1:63041304-63041323 Msa1206160:intron 25.0%
! TCGGGTAAACAAATAATAAA+TGG - chr8_1:63041322-63041341 Msa1206160:intron 25.0%
!!! TGGAATGAAATTTTTGAAAG+GGG - chr8_1:63041342-63041361 Msa1206160:intron 25.0%
! AAAAAACAAAATGATCCTCA+GGG + chr8_1:63041469-63041488 None:intergenic 25.0%
! TAAAAAACAAAATGATCCTC+AGG + chr8_1:63041470-63041489 None:intergenic 25.0%
!! AATCTACATTTTGCATGTAT+CGG + chr8_1:63041786-63041805 None:intergenic 25.0%
!! ACTTATAGCTGATAACTTTT+CGG + chr8_1:63042079-63042098 None:intergenic 25.0%
! ATTATTCAAGGAAAATGCTA+TGG - chr8_1:63042439-63042458 Msa1206160:intron 25.0%
! AAAATTAGAGTTAGGCAAAA+CGG - chr8_1:63042462-63042481 Msa1206160:intron 25.0%
!!! AGGGATCTTGTTTATATTTT+TGG - chr8_1:63042735-63042754 Msa1206160:five_prime_UTR 25.0%
! CTAACGCAAATTATGATATA+TGG - chr8_1:63042822-63042841 Msa1206160:five_prime_UTR 25.0%
AATTTGAAGGAAAAATGGGT+GGG + chr8_1:63034722-63034741 None:intergenic 30.0%
AAATTTGAAGGAAAAATGGG+TGG + chr8_1:63034723-63034742 None:intergenic 30.0%
TTGGGAAGAGAAAAATTTGA+AGG + chr8_1:63034735-63034754 None:intergenic 30.0%
TTGTTCTTTATGCGTGTTTA+TGG - chr8_1:63034887-63034906 Msa1206160:three_prime_UTR 30.0%
TGTTCAAACATCGAGTTAAA+CGG + chr8_1:63035576-63035595 None:intergenic 30.0%
ATTATTACGAAACTGAAGCT+AGG - chr8_1:63035703-63035722 Msa1206160:CDS 30.0%
TTATTACGAAACTGAAGCTA+GGG - chr8_1:63035704-63035723 Msa1206160:CDS 30.0%
!! GACTCGATTGTTTTATGTTT+AGG - chr8_1:63036001-63036020 Msa1206160:CDS 30.0%
TTGGTAGGATCTTTCAAATT+TGG - chr8_1:63036110-63036129 Msa1206160:intron 30.0%
! TAATTTTGTAGGATCTAGAG+GGG + chr8_1:63036166-63036185 None:intergenic 30.0%
ATATTGTATCAGATCGAAAG+GGG + chr8_1:63036244-63036263 None:intergenic 30.0%
GATATTGTATCAGATCGAAA+GGG + chr8_1:63036245-63036264 None:intergenic 30.0%
AGATATTGTATCAGATCGAA+AGG + chr8_1:63036246-63036265 None:intergenic 30.0%
TCCTTACTTTCATGAGTATT+TGG - chr8_1:63036277-63036296 Msa1206160:intron 30.0%
CCTTACTTTCATGAGTATTT+GGG - chr8_1:63036278-63036297 Msa1206160:intron 30.0%
TAATTAAGATACTGCCTTTC+TGG - chr8_1:63036430-63036449 Msa1206160:intron 30.0%
! TGTTAGGATCTTTCAAGTAT+GGG + chr8_1:63036716-63036735 None:intergenic 30.0%
! TTGTTAGGATCTTTCAAGTA+TGG + chr8_1:63036717-63036736 None:intergenic 30.0%
ACCATATGACATGAAAAAGA+GGG + chr8_1:63036751-63036770 None:intergenic 30.0%
TACTTGTAACTTACATTGAC+GGG + chr8_1:63036861-63036880 None:intergenic 30.0%
!!! GTTGGAAACTTTGTTTTTTG+CGG - chr8_1:63036996-63037015 Msa1206160:intron 30.0%
!! CTATTCTTCTTTTGAAAGCT+TGG - chr8_1:63037029-63037048 Msa1206160:intron 30.0%
GGTATATACAAGATAACTGT+AGG + chr8_1:63037082-63037101 None:intergenic 30.0%
AATATTGGCCAAAGTTTCAA+AGG - chr8_1:63037127-63037146 Msa1206160:intron 30.0%
TACATTGTATCAATCACAAG+AGG + chr8_1:63037507-63037526 None:intergenic 30.0%
!! TCATAATTGAAGTGTTGTTG+TGG + chr8_1:63037716-63037735 None:intergenic 30.0%
ATGTAGTTTGAATCACTAAC+AGG - chr8_1:63038242-63038261 Msa1206160:intron 30.0%
TGTAGTTTGAATCACTAACA+GGG - chr8_1:63038243-63038262 Msa1206160:intron 30.0%
! TGTGCATATTGACTATTTGT+GGG + chr8_1:63038296-63038315 None:intergenic 30.0%
! ATGTGCATATTGACTATTTG+TGG + chr8_1:63038297-63038316 None:intergenic 30.0%
ACATGTCAAAAACACATGAA+AGG - chr8_1:63038954-63038973 Msa1206160:intron 30.0%
TATGCTTTGCTTTCTACTAA+AGG - chr8_1:63039037-63039056 Msa1206160:intron 30.0%
ATGCTTTGCTTTCTACTAAA+GGG - chr8_1:63039038-63039057 Msa1206160:intron 30.0%
! TTACCCTAATTTTACACAAG+GGG + chr8_1:63039124-63039143 None:intergenic 30.0%
! CTTACCCTAATTTTACACAA+GGG + chr8_1:63039125-63039144 None:intergenic 30.0%
TAAAGATTGAGATCCTACAT+AGG + chr8_1:63039537-63039556 None:intergenic 30.0%
! CAAAAAGTATGGCTTAGTAT+GGG + chr8_1:63039579-63039598 None:intergenic 30.0%
! ACAAAAAGTATGGCTTAGTA+TGG + chr8_1:63039580-63039599 None:intergenic 30.0%
TAATGGTTGTATGTATAGAG+AGG + chr8_1:63039615-63039634 None:intergenic 30.0%
!! TTTCCAATGTACTGATTCTT+TGG - chr8_1:63039669-63039688 Msa1206160:intron 30.0%
TTTCTTGCAAGATATCAGTA+GGG + chr8_1:63039780-63039799 None:intergenic 30.0%
ATTTCTTGCAAGATATCAGT+AGG + chr8_1:63039781-63039800 None:intergenic 30.0%
! TTTTAGTCATGTAAACAGGA+AGG + chr8_1:63039844-63039863 None:intergenic 30.0%
GAGGATCTAAAAACATTTGT+GGG + chr8_1:63039952-63039971 None:intergenic 30.0%
TGAGGATCTAAAAACATTTG+TGG + chr8_1:63039953-63039972 None:intergenic 30.0%
! TCTACAACAAGAAGTGTAAT+GGG + chr8_1:63039986-63040005 None:intergenic 30.0%
! ATCTACAACAAGAAGTGTAA+TGG + chr8_1:63039987-63040006 None:intergenic 30.0%
TTGTAAGTTTGTATGGTTGA+TGG - chr8_1:63040039-63040058 Msa1206160:intron 30.0%
TGTAAGTTTGTATGGTTGAT+GGG - chr8_1:63040040-63040059 Msa1206160:intron 30.0%
! ATCATTGGCAAGGAAATTTT+GGG + chr8_1:63040097-63040116 None:intergenic 30.0%
ACTTTATCCAATGACATCAT+TGG + chr8_1:63040112-63040131 None:intergenic 30.0%
!! ATTTTTAATTCCTTGCTGGT+TGG - chr8_1:63040149-63040168 Msa1206160:intron 30.0%
TAATGTCATTAACAACAAGC+CGG + chr8_1:63040216-63040235 None:intergenic 30.0%
!! GCTTGTTGTTAATGACATTA+AGG - chr8_1:63040216-63040235 Msa1206160:intron 30.0%
GAATATTGTGAAACTTGATG+TGG - chr8_1:63040316-63040335 Msa1206160:intron 30.0%
ATCAATGATCCAATTACTAG+AGG + chr8_1:63040399-63040418 None:intergenic 30.0%
!! CTTGCTATTAGATTCACAAA+TGG + chr8_1:63040548-63040567 None:intergenic 30.0%
CCTTCTAATATGCTAAATGA+TGG + chr8_1:63040579-63040598 None:intergenic 30.0%
CCATCATTTAGCATATTAGA+AGG - chr8_1:63040576-63040595 Msa1206160:intron 30.0%
TGGATTATGGAATGCAAATT+TGG - chr8_1:63040688-63040707 Msa1206160:CDS 30.0%
TATCATTTGGAAAAGAACAG+AGG + chr8_1:63040795-63040814 None:intergenic 30.0%
AGGTCTCAGTTATAAAAAGT+TGG - chr8_1:63040865-63040884 Msa1206160:intron 30.0%
! AGTTATAAAAAGTTGGCTTC+TGG - chr8_1:63040872-63040891 Msa1206160:intron 30.0%
TGCAGTAGCATTAAATTTGT+TGG - chr8_1:63041109-63041128 Msa1206160:intron 30.0%
GACGAGTTTCAGTAATTTAA+AGG + chr8_1:63041162-63041181 None:intergenic 30.0%
! GATTCTTATATTTTTCCCTG+AGG - chr8_1:63041451-63041470 Msa1206160:intron 30.0%
!!! GTTTTTTATATCAGAAGTGC+TGG - chr8_1:63041482-63041501 Msa1206160:intron 30.0%
ATTGAACTGAGCAAAACTAT+TGG + chr8_1:63041534-63041553 None:intergenic 30.0%
AAAGAAGCCATTAACTAGAA+AGG - chr8_1:63041577-63041596 Msa1206160:intron 30.0%
TTCCAAGTTAAAGGAATACA+AGG - chr8_1:63041726-63041745 Msa1206160:intron 30.0%
!! TTAGTTGCAATTTTAACCCA+GGG + chr8_1:63041906-63041925 None:intergenic 30.0%
AATCTTCGAATAAGAGAAAG+AGG - chr8_1:63042052-63042071 Msa1206160:intron 30.0%
AGTTTCTTGATCAATTTCTG+AGG + chr8_1:63042304-63042323 None:intergenic 30.0%
!! CAGTTATGAGGAATTTTTAG+TGG - chr8_1:63042369-63042388 Msa1206160:CDS 30.0%
ATGCTGTATCGTATTATTCA+AGG - chr8_1:63042427-63042446 Msa1206160:intron 30.0%
TGCTATGGAAAATTAGAGTT+AGG - chr8_1:63042454-63042473 Msa1206160:intron 30.0%
!! CTGATTTTAGAGACATTGTT+TGG + chr8_1:63042491-63042510 None:intergenic 30.0%
!! CAAACAATGTCTCTAAAATC+AGG - chr8_1:63042489-63042508 Msa1206160:intron 30.0%
GATTCAACTAGCTCAAAAAA+TGG + chr8_1:63042522-63042541 None:intergenic 30.0%
!! TCAGTTGATTCGAAGAAAGT+AGG + chr8_1:63034825-63034844 None:intergenic 35.0%
TTGAACTTGATCGTATGAAG+TGG - chr8_1:63035490-63035509 Msa1206160:CDS 35.0%
TATTACGAAACTGAAGCTAG+GGG - chr8_1:63035705-63035724 Msa1206160:CDS 35.0%
CAGAAAGCAAATTAACCCTA+TGG + chr8_1:63035733-63035752 None:intergenic 35.0%
!! TAGCTACTTTGGTTTGTTAG+AGG - chr8_1:63035767-63035786 Msa1206160:CDS 35.0%
!! TTTGGTTTGTTAGAGGCAAA+AGG - chr8_1:63035774-63035793 Msa1206160:CDS 35.0%
GAGTGAAATCGCAAAATTGT+GGG + chr8_1:63035844-63035863 None:intergenic 35.0%
TGAGTGAAATCGCAAAATTG+TGG + chr8_1:63035845-63035864 None:intergenic 35.0%
AACTCAAAGCTAGAATCGTA+TGG + chr8_1:63035962-63035981 None:intergenic 35.0%
TGAGTAGAATACTTCGATCT+TGG - chr8_1:63036188-63036207 Msa1206160:intron 35.0%
CCCAAATACTCATGAAAGTA+AGG + chr8_1:63036281-63036300 None:intergenic 35.0%
CACTTCTATCCAAAAGAAAC+AGG + chr8_1:63036352-63036371 None:intergenic 35.0%
TAAAAACATCCCCACTTTAG+AGG - chr8_1:63036553-63036572 Msa1206160:intron 35.0%
CATATGACATGAAAAAGAGG+GGG + chr8_1:63036749-63036768 None:intergenic 35.0%
CCATATGACATGAAAAAGAG+GGG + chr8_1:63036750-63036769 None:intergenic 35.0%
CACCATATGACATGAAAAAG+AGG + chr8_1:63036752-63036771 None:intergenic 35.0%
! AAAGGATTTTCGATCAAGTG+GGG + chr8_1:63036830-63036849 None:intergenic 35.0%
! CAAAGGATTTTCGATCAAGT+GGG + chr8_1:63036831-63036850 None:intergenic 35.0%
! TCAAAGGATTTTCGATCAAG+TGG + chr8_1:63036832-63036851 None:intergenic 35.0%
ACTTGTAACTTACATTGACG+GGG + chr8_1:63036860-63036879 None:intergenic 35.0%
GTATATACCTCACATAAGTC+AGG - chr8_1:63037093-63037112 Msa1206160:intron 35.0%
! CAGGCTATTTGCTACAATAT+TGG - chr8_1:63037112-63037131 Msa1206160:intron 35.0%
TGGAATTTAGGGACCATTTA+TGG - chr8_1:63037302-63037321 Msa1206160:intron 35.0%
AGATGACAGGAGAATGAAAT+TGG + chr8_1:63037532-63037551 None:intergenic 35.0%
AAACACCCTGAGTTTAACAA+GGG + chr8_1:63037555-63037574 None:intergenic 35.0%
AAAACACCCTGAGTTTAACA+AGG + chr8_1:63037556-63037575 None:intergenic 35.0%
! TGGTGAGATTATTTGCTACT+TGG - chr8_1:63037619-63037638 Msa1206160:intron 35.0%
! CAAAAAACAGTAGTGGAGAA+AGG - chr8_1:63037736-63037755 Msa1206160:intron 35.0%
! AAACAAGGTTGGTCAGTTAT+GGG + chr8_1:63038051-63038070 None:intergenic 35.0%
! TAAACAAGGTTGGTCAGTTA+TGG + chr8_1:63038052-63038071 None:intergenic 35.0%
! TGGTTTTCAGTAAACAAGGT+TGG + chr8_1:63038062-63038081 None:intergenic 35.0%
CCATTACTAGACCTGAAATT+TGG + chr8_1:63038082-63038101 None:intergenic 35.0%
! CCAAATTTCAGGTCTAGTAA+TGG - chr8_1:63038079-63038098 Msa1206160:intron 35.0%
TAAAGCTGAAGATCCATTCA+TGG - chr8_1:63038135-63038154 Msa1206160:intron 35.0%
AAAGCTGAAGATCCATTCAT+GGG - chr8_1:63038136-63038155 Msa1206160:intron 35.0%
ATTTGGATTTCTCCCATGAA+TGG + chr8_1:63038151-63038170 None:intergenic 35.0%
GAAAGAATGTTATGGCAGAT+TGG + chr8_1:63038205-63038224 None:intergenic 35.0%
TCTGCCATAACATTCTTTCT+AGG - chr8_1:63038206-63038225 Msa1206160:intron 35.0%
ACCTCCTAGAAAGAATGTTA+TGG + chr8_1:63038213-63038232 None:intergenic 35.0%
!! AGTTGGTCTGATTTTGACAT+AGG - chr8_1:63038409-63038428 Msa1206160:intron 35.0%
AATTGCTGAAAAAATGGGTC+AGG + chr8_1:63038683-63038702 None:intergenic 35.0%
! GCTCATGATTTTTACTACCA+TGG + chr8_1:63038732-63038751 None:intergenic 35.0%
TGCAACATGACCAGAAAAAA+TGG + chr8_1:63038858-63038877 None:intergenic 35.0%
TGCTTTGCTTTCTACTAAAG+GGG - chr8_1:63039039-63039058 Msa1206160:intron 35.0%
ACAACCCCTTGTGTAAAATT+AGG - chr8_1:63039117-63039136 Msa1206160:intron 35.0%
CAACCCCTTGTGTAAAATTA+GGG - chr8_1:63039118-63039137 Msa1206160:intron 35.0%
! CCTTACCCTAATTTTACACA+AGG + chr8_1:63039126-63039145 None:intergenic 35.0%
CCTTGTGTAAAATTAGGGTA+AGG - chr8_1:63039123-63039142 Msa1206160:intron 35.0%
GCTACATACAATACACCAAA+TGG - chr8_1:63039145-63039164 Msa1206160:intron 35.0%
ACATACAATACACCAAATGG+TGG - chr8_1:63039148-63039167 Msa1206160:intron 35.0%
CATACAATACACCAAATGGT+GGG - chr8_1:63039149-63039168 Msa1206160:intron 35.0%
TGTCAATTTGTGAATCTGGT+AGG - chr8_1:63039455-63039474 Msa1206160:intron 35.0%
ACGCTTCAGTACAAAAAGTA+TGG + chr8_1:63039590-63039609 None:intergenic 35.0%
TCTCCAAAGAATCAGTACAT+TGG + chr8_1:63039675-63039694 None:intergenic 35.0%
ATTAGTGACATACATCACTC+TGG - chr8_1:63039721-63039740 Msa1206160:intron 35.0%
CTGATATCTTGCAAGAAATG+TGG - chr8_1:63039782-63039801 Msa1206160:intron 35.0%
! TTGTTAACTCATGTGGATTG+TGG - chr8_1:63039810-63039829 Msa1206160:intron 35.0%
! GCTCTTTTAGTCATGTAAAC+AGG + chr8_1:63039848-63039867 None:intergenic 35.0%
! TACACTTCTTGTTGTAGATG+TGG - chr8_1:63039988-63040007 Msa1206160:intron 35.0%
! TCATTGGCAAGGAAATTTTG+GGG + chr8_1:63040096-63040115 None:intergenic 35.0%
! CATCATTGGCAAGGAAATTT+TGG + chr8_1:63040098-63040117 None:intergenic 35.0%
!! TTGGTTTGGAAATCTCACAA+TGG - chr8_1:63040168-63040187 Msa1206160:intron 35.0%
! TGGTTTGGAAATCTCACAAT+GGG - chr8_1:63040169-63040188 Msa1206160:intron 35.0%
!!! TTTTTTTTTCCCGAAAGGAC+CGG - chr8_1:63040194-63040213 Msa1206160:intron 35.0%
TTGATTCCACCTTAAGTGTT+TGG - chr8_1:63040245-63040264 Msa1206160:intron 35.0%
TGTTGGAAACCAAACACTTA+AGG + chr8_1:63040257-63040276 None:intergenic 35.0%
ATTGTGAAACTTGATGTGGA+TGG - chr8_1:63040320-63040339 Msa1206160:intron 35.0%
TTGTGAAACTTGATGTGGAT+GGG - chr8_1:63040321-63040340 Msa1206160:intron 35.0%
!! ATTTTGGAAACCGTAGCTAT+TGG - chr8_1:63040349-63040368 Msa1206160:intron 35.0%
!! TTTTGGAAACCGTAGCTATT+GGG - chr8_1:63040350-63040369 Msa1206160:intron 35.0%
TCATAACCTCCTCTAGTAAT+TGG - chr8_1:63040387-63040406 Msa1206160:intron 35.0%
AATGATCCAATTACTAGAGG+AGG + chr8_1:63040396-63040415 None:intergenic 35.0%
GAATTACATGCAATTGCTTG+TGG - chr8_1:63040488-63040507 Msa1206160:intron 35.0%
!!! TGTGGTTTGGTTTTTTGACT+TGG - chr8_1:63040506-63040525 Msa1206160:intron 35.0%
TAGAAGAGAAATAGACAGAG+CGG + chr8_1:63040727-63040746 None:intergenic 35.0%
TTCCTGATACAAATGGAGAT+TGG - chr8_1:63040840-63040859 Msa1206160:intron 35.0%
TCCTGATACAAATGGAGATT+GGG - chr8_1:63040841-63040860 Msa1206160:intron 35.0%
! AAAGAGTCTGGTTTGAAACT+CGG + chr8_1:63040956-63040975 None:intergenic 35.0%
CTGTATGTGAAGTTGAATGT+TGG - chr8_1:63040976-63040995 Msa1206160:intron 35.0%
GGAAACAATTACAAGATTCG+AGG - chr8_1:63040997-63041016 Msa1206160:intron 35.0%
! AACCTTGTTGATTATGTCAC+TGG - chr8_1:63041074-63041093 Msa1206160:intron 35.0%
! ACCTTGTTGATTATGTCACT+GGG - chr8_1:63041075-63041094 Msa1206160:intron 35.0%
ATGCAACACTTATTGCTAAG+CGG - chr8_1:63041271-63041290 Msa1206160:intron 35.0%
TAAATACTACCAGAGCAAAC+TGG + chr8_1:63041389-63041408 None:intergenic 35.0%
!! GCATGTACCTTTCTAGTTAA+TGG + chr8_1:63041587-63041606 None:intergenic 35.0%
! TGTATGTTGCTTGGAAGTAA+TGG - chr8_1:63041656-63041675 Msa1206160:intron 35.0%
! ATGGAGGTTTTCCAAGTTAA+AGG - chr8_1:63041717-63041736 Msa1206160:intron 35.0%
CTCCTTGTATTCCTTTAACT+TGG + chr8_1:63041731-63041750 None:intergenic 35.0%
!! ATTTTGCATGTATCGGTCAA+AGG + chr8_1:63041779-63041798 None:intergenic 35.0%
CATGCAAAATGTAGATTTGC+TGG - chr8_1:63041789-63041808 Msa1206160:intron 35.0%
!! CTTAGTTGCAATTTTAACCC+AGG + chr8_1:63041907-63041926 None:intergenic 35.0%
CTGGGTTAAAATTGCAACTA+AGG - chr8_1:63041905-63041924 Msa1206160:intron 35.0%
ATCAGCTATAAGTGATCTTC+TGG - chr8_1:63042086-63042105 Msa1206160:intron 35.0%
TGTTGTACCAGCAAAAGAAT+TGG - chr8_1:63042251-63042270 Msa1206160:intron 35.0%
! GAGTAATCCAATTCTTTTGC+TGG + chr8_1:63042261-63042280 None:intergenic 35.0%
GGATTACTCGTTACCAAAAT+TGG - chr8_1:63042272-63042291 Msa1206160:intron 35.0%
TACTCGTTACCAAAATTGGT+TGG - chr8_1:63042276-63042295 Msa1206160:intron 35.0%
ACTCGTTACCAAAATTGGTT+GGG - chr8_1:63042277-63042296 Msa1206160:intron 35.0%
!! GATTCGAAAAGAAGTATCAC+TGG - chr8_1:63042615-63042634 Msa1206160:CDS 35.0%
CCAGAATTAGGCAATAACAA+TGG + chr8_1:63042681-63042700 None:intergenic 35.0%
! CCATTGTTATTGCCTAATTC+TGG - chr8_1:63042678-63042697 Msa1206160:five_prime_UTR 35.0%
TGTAGAATTCTGCCAGAATT+AGG + chr8_1:63042693-63042712 None:intergenic 35.0%
ATAAACAAGATCCCTGCAAT+TGG + chr8_1:63042730-63042749 None:intergenic 35.0%
TTTCGGTTCTTAAGAAGCTG+GGG + chr8_1:63034647-63034666 None:intergenic 40.0%
GTTTCGGTTCTTAAGAAGCT+GGG + chr8_1:63034648-63034667 None:intergenic 40.0%
AAGGAAAAATGGGTGGGAAT+TGG + chr8_1:63034716-63034735 None:intergenic 40.0%
TTTATGCGTGTTTATGGCGA+CGG - chr8_1:63034893-63034912 Msa1206160:three_prime_UTR 40.0%
AACAATTCAACGGCGAAAGT+CGG - chr8_1:63034924-63034943 Msa1206160:three_prime_UTR 40.0%
AAACCTAAGTGCAAACAGTG+TGG - chr8_1:63035011-63035030 Msa1206160:three_prime_UTR 40.0%
CAACTCTTGCATTGCTCATA+AGG + chr8_1:63035141-63035160 None:intergenic 40.0%
!!! CGGACAAGGATTTTGATTCT+TGG + chr8_1:63035169-63035188 None:intergenic 40.0%
CAAAATCCTTGTCCGATTCA+TGG - chr8_1:63035174-63035193 Msa1206160:CDS 40.0%
AGTTAATCAAGTCGCCATCA+AGG + chr8_1:63035320-63035339 None:intergenic 40.0%
! TGATGGCGACTTGATTAACT+TGG - chr8_1:63035320-63035339 Msa1206160:CDS 40.0%
TCAAAACACATTTACGCGAG+TGG + chr8_1:63035474-63035493 None:intergenic 40.0%
ATTACGAAACTGAAGCTAGG+GGG - chr8_1:63035706-63035725 Msa1206160:CDS 40.0%
ATTTGCTTTCTGCCACTATC+TGG - chr8_1:63035741-63035760 Msa1206160:CDS 40.0%
TTTGCTTTCTGCCACTATCT+GGG - chr8_1:63035742-63035761 Msa1206160:CDS 40.0%
TTCACGATCTGGATCGATAA+GGG + chr8_1:63035868-63035887 None:intergenic 40.0%
ATTCACGATCTGGATCGATA+AGG + chr8_1:63035869-63035888 None:intergenic 40.0%
TCAGGATTCAATTCACGATC+TGG + chr8_1:63035879-63035898 None:intergenic 40.0%
! ACAGGGATTTTACTCAACTC+AGG + chr8_1:63035897-63035916 None:intergenic 40.0%
!! TAGAAAGCTCTAGACCAGAA+AGG + chr8_1:63036447-63036466 None:intergenic 40.0%
! TGGTCTAGAGCTTTCTAACA+TGG - chr8_1:63036450-63036469 Msa1206160:intron 40.0%
ATTGGAAAAATGCCCTCTGA+AGG - chr8_1:63036492-63036511 Msa1206160:intron 40.0%
TTGGAAAAATGCCCTCTGAA+GGG - chr8_1:63036493-63036512 Msa1206160:intron 40.0%
!! GATAAAGCTCCTCTAAAGTG+GGG + chr8_1:63036565-63036584 None:intergenic 40.0%
!! GGATAAAGCTCCTCTAAAGT+GGG + chr8_1:63036566-63036585 None:intergenic 40.0%
! TGGATAAAGCTCCTCTAAAG+TGG + chr8_1:63036567-63036586 None:intergenic 40.0%
! GAGCTTTATCCACAAAGACT+TGG - chr8_1:63036575-63036594 Msa1206160:intron 40.0%
TAACTCACACCAAGTCTTTG+TGG + chr8_1:63036587-63036606 None:intergenic 40.0%
! AGGGGGTATGAAAAGTTGTT+AGG + chr8_1:63036732-63036751 None:intergenic 40.0%
!! CCCCTCTTTTTCATGTCATA+TGG - chr8_1:63036747-63036766 Msa1206160:intron 40.0%
AGTGTTGTCAGGAATTGTAC+TGG + chr8_1:63036791-63036810 None:intergenic 40.0%
CTTGTAACTTACATTGACGG+GGG + chr8_1:63036859-63036878 None:intergenic 40.0%
!! TCTTCTTTTGAAAGCTTGGC+TGG - chr8_1:63037033-63037052 Msa1206160:intron 40.0%
GGACTTTGTACTTTGTAGTG+CGG - chr8_1:63037054-63037073 Msa1206160:intron 40.0%
CAAATAGCCTGACTTATGTG+AGG + chr8_1:63037103-63037122 None:intergenic 40.0%
! CAAGAGGTTAGCTAAGCATT+GGG + chr8_1:63037491-63037510 None:intergenic 40.0%
! ACAAGAGGTTAGCTAAGCAT+TGG + chr8_1:63037492-63037511 None:intergenic 40.0%
AGTTTAACAAGGGAGATGAC+AGG + chr8_1:63037545-63037564 None:intergenic 40.0%
TCATCTCCCTTGTTAAACTC+AGG - chr8_1:63037546-63037565 Msa1206160:intron 40.0%
CATCTCCCTTGTTAAACTCA+GGG - chr8_1:63037547-63037566 Msa1206160:intron 40.0%
!! GTTAAACTCAGGGTGTTTTG+AGG - chr8_1:63037557-63037576 Msa1206160:intron 40.0%
CGTCATAACTATTTCAGCAC+TGG + chr8_1:63037646-63037665 None:intergenic 40.0%
GTTATGACGATCAGCTACTT+CGG - chr8_1:63037657-63037676 Msa1206160:intron 40.0%
! AGACTTCAGACATTGATGAC+AGG + chr8_1:63037927-63037946 None:intergenic 40.0%
!! TACAAGGCATTGCTACTCAT+TGG + chr8_1:63038019-63038038 None:intergenic 40.0%
! AACAAGGTTGGTCAGTTATG+GGG + chr8_1:63038050-63038069 None:intergenic 40.0%
CAGCTTTACAGGTTTGTAGT+GGG + chr8_1:63038123-63038142 None:intergenic 40.0%
TCAGCTTTACAGGTTTGTAG+TGG + chr8_1:63038124-63038143 None:intergenic 40.0%
GAATGGATCTTCAGCTTTAC+AGG + chr8_1:63038134-63038153 None:intergenic 40.0%
GCCATAACATTCTTTCTAGG+AGG - chr8_1:63038209-63038228 Msa1206160:intron 40.0%
CACACACGATTGTAAAGAGA+GGG - chr8_1:63038384-63038403 Msa1206160:intron 40.0%
ACACACGATTGTAAAGAGAG+GGG - chr8_1:63038385-63038404 Msa1206160:intron 40.0%
GTTATGAGCATATGACCACT+GGG - chr8_1:63038443-63038462 Msa1206160:intron 40.0%
TTATGAGCATATGACCACTG+GGG - chr8_1:63038444-63038463 Msa1206160:intron 40.0%
TGTGGTTATGCGATCTTCAT+AGG - chr8_1:63038767-63038786 Msa1206160:intron 40.0%
GCATGGGAAGAATCACAAAT+TGG - chr8_1:63038805-63038824 Msa1206160:intron 40.0%
AATCACAAATTGGCTGGAAG+CGG - chr8_1:63038815-63038834 Msa1206160:intron 40.0%
AATGTGCAGTAGGCTAGAAA+CGG + chr8_1:63038990-63039009 None:intergenic 40.0%
GCGACAAATTAATGTGCAGT+AGG + chr8_1:63039000-63039019 None:intergenic 40.0%
GCTTTGCTTTCTACTAAAGG+GGG - chr8_1:63039040-63039059 Msa1206160:intron 40.0%
ACATGACAACAACTTTACCG+AGG + chr8_1:63039066-63039085 None:intergenic 40.0%
GTCATGTGACTGAAAGATCA+CGG - chr8_1:63039079-63039098 Msa1206160:intron 40.0%
TCATGTGACTGAAAGATCAC+GGG - chr8_1:63039080-63039099 Msa1206160:intron 40.0%
AGTGGAAAGCAAAGCGTAAA+GGG + chr8_1:63039223-63039242 None:intergenic 40.0%
AAGTGGAAAGCAAAGCGTAA+AGG + chr8_1:63039224-63039243 None:intergenic 40.0%
TTGAGATCCTACATAGGATC+AGG + chr8_1:63039531-63039550 None:intergenic 40.0%
GGTGTCTTTGTTAACTCATG+TGG - chr8_1:63039803-63039822 Msa1206160:intron 40.0%
! TAACTCATGTGGATTGTGGA+TGG - chr8_1:63039814-63039833 Msa1206160:intron 40.0%
ATGACTAAAAGAGCCACACA+TGG - chr8_1:63039854-63039873 Msa1206160:intron 40.0%
CAAGACCAGTTATGGGAAAT+AGG + chr8_1:63039907-63039926 None:intergenic 40.0%
! CTATTTCCCATAACTGGTCT+TGG - chr8_1:63039905-63039924 Msa1206160:intron 40.0%
AAGTGAAACAGAAACTGCAC+CGG + chr8_1:63040071-63040090 None:intergenic 40.0%
TTCCTTGCCAATGATGTCAT+TGG - chr8_1:63040102-63040121 Msa1206160:intron 40.0%
ATCCAATGACATCATTGGCA+AGG + chr8_1:63040107-63040126 None:intergenic 40.0%
! TAATTCCTTGCTGGTTGGTT+TGG - chr8_1:63040154-63040173 Msa1206160:intron 40.0%
!!! GGGAGTTTTTTTTTCCCGAA+AGG - chr8_1:63040189-63040208 Msa1206160:intron 40.0%
TGGAAACCAAACACTTAAGG+TGG + chr8_1:63040254-63040273 None:intergenic 40.0%
! ACGACATGAGGTTTGTTTCT+TGG - chr8_1:63040282-63040301 Msa1206160:intron 40.0%
AAACCGTAGCTATTGGGTTA+TGG - chr8_1:63040356-63040375 Msa1206160:intron 40.0%
ACATGCAATTGCTTGTGGTT+TGG - chr8_1:63040493-63040512 Msa1206160:intron 40.0%
ACAATGGTTACCTTCCAACA+AGG + chr8_1:63040637-63040656 None:intergenic 40.0%
AAGGTAACCATTGTGCAGAT+TGG - chr8_1:63040643-63040662 Msa1206160:intron 40.0%
TTGCATTCCATAATCCAAGC+TGG + chr8_1:63040685-63040704 None:intergenic 40.0%
AGAAGAGAAATAGACAGAGC+GGG + chr8_1:63040726-63040745 None:intergenic 40.0%
TCTCTTCTAGCAGATGCATT+AGG - chr8_1:63040738-63040757 Msa1206160:CDS 40.0%
TCCCAATCTCCATTTGTATC+AGG + chr8_1:63040845-63040864 None:intergenic 40.0%
GATACAAATGGAGATTGGGA+AGG - chr8_1:63040845-63040864 Msa1206160:intron 40.0%
ACATAGCTAGTTGCAAGATC+TGG - chr8_1:63040925-63040944 Msa1206160:intron 40.0%
CTTCACATACAGAAAGAGTC+TGG + chr8_1:63040968-63040987 None:intergenic 40.0%
! CCTTGTTGATTATGTCACTG+GGG - chr8_1:63041076-63041095 Msa1206160:intron 40.0%
! TTTGAACTTCCAGTTTGCTC+TGG - chr8_1:63041377-63041396 Msa1206160:intron 40.0%
ATGCTGCAGCTATCAATGAA+TGG - chr8_1:63041698-63041717 Msa1206160:intron 40.0%
! ATCTGTGAAGCATTCAGATG+AGG - chr8_1:63041822-63041841 Msa1206160:intron 40.0%
AACAATGAGGTAATGATCCC+TGG - chr8_1:63041886-63041905 Msa1206160:intron 40.0%
ACAATGAGGTAATGATCCCT+GGG - chr8_1:63041887-63041906 Msa1206160:intron 40.0%
AATTAACAAAGCCCGAAGTG+AGG - chr8_1:63042113-63042132 Msa1206160:intron 40.0%
CATCAGAATCAAACTGCTGA+AGG - chr8_1:63042225-63042244 Msa1206160:intron 40.0%
GAGAATGTAGAGCAGTTATG+AGG - chr8_1:63042357-63042376 Msa1206160:CDS 40.0%
!! GAAGTATCACTGGTTCAGTT+CGG - chr8_1:63042625-63042644 Msa1206160:exon 40.0%
ACTAATGACGACTTCATCAC+AGG + chr8_1:63042655-63042674 None:intergenic 40.0%
ACTCTGATACATCCAATTGC+AGG - chr8_1:63042715-63042734 Msa1206160:five_prime_UTR 40.0%
CTCTGATACATCCAATTGCA+GGG - chr8_1:63042716-63042735 Msa1206160:five_prime_UTR 40.0%
TTCGGTTCTTAAGAAGCTGG+GGG + chr8_1:63034646-63034665 None:intergenic 45.0%
GGTTTCGGTTCTTAAGAAGC+TGG + chr8_1:63034649-63034668 None:intergenic 45.0%
TTCGCCGTTGAATTGTTGCT+CGG + chr8_1:63034921-63034940 None:intergenic 45.0%
CGGTGAATTGGTTAGACCTA+GGG + chr8_1:63034952-63034971 None:intergenic 45.0%
CCTAGGTCTAACCAATTCAC+CGG - chr8_1:63034950-63034969 Msa1206160:three_prime_UTR 45.0%
TTCTGACCGCGTTGAGATTT+CGG + chr8_1:63034990-63035009 None:intergenic 45.0%
TTGCCACACTGTTTGCACTT+AGG + chr8_1:63035017-63035036 None:intergenic 45.0%
AACTGACCATGAATCGGACA+AGG + chr8_1:63035183-63035202 None:intergenic 45.0%
TGTCCGATTCATGGTCAGTT+TGG - chr8_1:63035183-63035202 Msa1206160:CDS 45.0%
GAGCCAAACTGACCATGAAT+CGG + chr8_1:63035189-63035208 None:intergenic 45.0%
TTGCTTTCTGCCACTATCTG+GGG - chr8_1:63035743-63035762 Msa1206160:CDS 45.0%
AAGTAGCTAACCCCAGATAG+TGG + chr8_1:63035756-63035775 None:intergenic 45.0%
!! CTATCTGGGGTTAGCTACTT+TGG - chr8_1:63035756-63035775 Msa1206160:CDS 45.0%
!! GGTTTGTTAGAGGCAAAAGG+AGG - chr8_1:63035777-63035796 Msa1206160:CDS 45.0%
! GGGTTTTCACGATTCTGATC+AGG + chr8_1:63035824-63035843 None:intergenic 45.0%
AGTGTAAGCGTAACTCCATG+AGG - chr8_1:63037338-63037357 Msa1206160:intron 45.0%
CATAGTCATCACCCTGAGTT+GGG - chr8_1:63037580-63037599 Msa1206160:intron 45.0%
TTGACTTAGAGCCCAACTCA+GGG + chr8_1:63037594-63037613 None:intergenic 45.0%
!! TGAGTTGGGCTCTAAGTCAA+GGG - chr8_1:63037594-63037613 Msa1206160:intron 45.0%
GGAGAAAGGCAACTGTAACT+CGG - chr8_1:63037750-63037769 Msa1206160:intron 45.0%
TGCAGCAAAACTAGTGTGGA+TGG + chr8_1:63037786-63037805 None:intergenic 45.0%
TCACTGCAGCAAAACTAGTG+TGG + chr8_1:63037790-63037809 None:intergenic 45.0%
AACATTCCTGTACTCTGCCT+TGG - chr8_1:63037816-63037835 Msa1206160:intron 45.0%
ATCAGCTTGTAGGCATTCAG+TGG + chr8_1:63037958-63037977 None:intergenic 45.0%
ACTGAATGCCTACAAGCTGA+TGG - chr8_1:63037957-63037976 Msa1206160:intron 45.0%
CTGAATGCCTACAAGCTGAT+GGG - chr8_1:63037958-63037977 Msa1206160:intron 45.0%
TTATGGGGGTCGGTAATACA+AGG + chr8_1:63038035-63038054 None:intergenic 45.0%
! ACAAGGTTGGTCAGTTATGG+GGG + chr8_1:63038049-63038068 None:intergenic 45.0%
! TTTGTGGGCTATAAGTCCAG+AGG + chr8_1:63038281-63038300 None:intergenic 45.0%
GCACACACGATTGTAAAGAG+AGG - chr8_1:63038383-63038402 Msa1206160:intron 45.0%
CACACGATTGTAAAGAGAGG+GGG - chr8_1:63038386-63038405 Msa1206160:intron 45.0%
ATTGTAAAGAGAGGGGGAGT+TGG - chr8_1:63038392-63038411 Msa1206160:intron 45.0%
TTTGACATAGGCATCAGAGC+AGG - chr8_1:63038421-63038440 Msa1206160:intron 45.0%
GGTTATGAGCATATGACCAC+TGG - chr8_1:63038442-63038461 Msa1206160:intron 45.0%
! TCGTTACTATTTGCTGCTGC+TGG - chr8_1:63038513-63038532 Msa1206160:intron 45.0%
! TGCTGGTTATTGTCACAGTG+AGG - chr8_1:63038530-63038549 Msa1206160:intron 45.0%
GCTGGTTATTGTCACAGTGA+GGG - chr8_1:63038531-63038550 Msa1206160:intron 45.0%
CTGAAAAAATGGGTCAGGTC+AGG + chr8_1:63038678-63038697 None:intergenic 45.0%
CGATCTTAACAGCAGTACCA+TGG - chr8_1:63038712-63038731 Msa1206160:intron 45.0%
AACCACACGATCTCACACAT+TGG + chr8_1:63038754-63038773 None:intergenic 45.0%
GGGAAGAATCACAAATTGGC+TGG - chr8_1:63038809-63038828 Msa1206160:intron 45.0%
!!! CGTGTGTCAGCCATTTTTTC+TGG - chr8_1:63038845-63038864 Msa1206160:intron 45.0%
!!! TTGCACAGAGCCTTGTTTTG+TGG - chr8_1:63038873-63038892 Msa1206160:intron 45.0%
!!! TGCACAGAGCCTTGTTTTGT+GGG - chr8_1:63038874-63038893 Msa1206160:intron 45.0%
!!! ACGGTGTCGTTTTAAGAACC+GGG + chr8_1:63038912-63038931 None:intergenic 45.0%
!!! GACGGTGTCGTTTTAAGAAC+CGG + chr8_1:63038913-63038932 None:intergenic 45.0%
! TTACACAAGGGGTTGTTTCC+AGG + chr8_1:63039113-63039132 None:intergenic 45.0%
GAAAGCAAAGCGTAAAGGGT+TGG + chr8_1:63039219-63039238 None:intergenic 45.0%
ACTCCTTCCTGATCCTATGT+AGG - chr8_1:63039521-63039540 Msa1206160:intron 45.0%
GATCCTACATAGGATCAGGA+AGG + chr8_1:63039527-63039546 None:intergenic 45.0%
!! AAATCGCAAAGTACCGTGTG+CGG + chr8_1:63039652-63039671 None:intergenic 45.0%
ACATACATCACTCTGGTGAG+TGG - chr8_1:63039728-63039747 Msa1206160:intron 45.0%
GATATCAGTAGGGAGTTGAG+TGG + chr8_1:63039770-63039789 None:intergenic 45.0%
CAGTTATGGGAAATAGGCAC+AGG + chr8_1:63039901-63039920 None:intergenic 45.0%
CTGTGCCTATTTCCCATAAC+TGG - chr8_1:63039899-63039918 Msa1206160:intron 45.0%
CCAGATCCAAGACCAGTTAT+GGG + chr8_1:63039914-63039933 None:intergenic 45.0%
TCCAGATCCAAGACCAGTTA+TGG + chr8_1:63039915-63039934 None:intergenic 45.0%
GATTTCCAAACCAACCAGCA+AGG + chr8_1:63040162-63040181 None:intergenic 45.0%
TAACAACAAGCCGGTCCTTT+CGG + chr8_1:63040207-63040226 None:intergenic 45.0%
TCCAACAACAGAACGACATG+AGG - chr8_1:63040270-63040289 Msa1206160:intron 45.0%
ACCTCATGTCGTTCTGTTGT+TGG + chr8_1:63040274-63040293 None:intergenic 45.0%
! ATGTGGATGGGAGCTCATTT+TGG - chr8_1:63040333-63040352 Msa1206160:intron 45.0%
CAGCCATAACCCAATAGCTA+CGG + chr8_1:63040362-63040381 None:intergenic 45.0%
CATTGATGTCTCTAGTAGCC+AGG - chr8_1:63040412-63040431 Msa1206160:intron 45.0%
!! TTTGACTTGGAGCGCTGTTA+TGG - chr8_1:63040519-63040538 Msa1206160:intron 45.0%
GTGCTGAAAACACAGGTTCT+AGG + chr8_1:63040613-63040632 None:intergenic 45.0%
ACAAGGTGTGCTGAAAACAC+AGG + chr8_1:63040620-63040639 None:intergenic 45.0%
! GTGTTTTCAGCACACCTTGT+TGG - chr8_1:63040620-63040639 Msa1206160:intron 45.0%
TTTCAGCACACCTTGTTGGA+AGG - chr8_1:63040624-63040643 Msa1206160:intron 45.0%
TGGTAAGCCAATCTGCACAA+TGG + chr8_1:63040653-63040672 None:intergenic 45.0%
!! AGATTGGCTTACCAAGCTCT+GGG - chr8_1:63040659-63040678 Msa1206160:intron 45.0%
AAGAGAAATAGACAGAGCGG+GGG + chr8_1:63040724-63040743 None:intergenic 45.0%
GAAGAGAAATAGACAGAGCG+GGG + chr8_1:63040725-63040744 None:intergenic 45.0%
GGAAAAGAACAGAGGAGACT+AGG + chr8_1:63040787-63040806 None:intergenic 45.0%
CCCCAGTGACATAATCAACA+AGG + chr8_1:63041079-63041098 None:intergenic 45.0%
CTAGCAAGCTGTATGTTGCT+TGG - chr8_1:63041647-63041666 Msa1206160:intron 45.0%
ATGGCACTGTGTCTGATTAC+AGG - chr8_1:63041675-63041694 Msa1206160:intron 45.0%
CTGCAGCTATCAATGAATGG+AGG - chr8_1:63041701-63041720 Msa1206160:intron 45.0%
CAAGGAGCGAAATGTTGAAG+CGG - chr8_1:63041744-63041763 Msa1206160:intron 45.0%
TGAGGATGTGTCTTCTGCAT+CGG - chr8_1:63041840-63041859 Msa1206160:intron 45.0%
TCATTGTTCTCTGTCGAGGT+AGG + chr8_1:63041874-63041893 None:intergenic 45.0%
TACCTCGACAGAGAACAATG+AGG - chr8_1:63041873-63041892 Msa1206160:intron 45.0%
TACCTCATTGTTCTCTGTCG+AGG + chr8_1:63041878-63041897 None:intergenic 45.0%
TCAAACTCGACGAGAAGTGA+TGG - chr8_1:63041928-63041947 Msa1206160:intron 45.0%
AAGCTCAAGTCTGCTGTAGA+TGG - chr8_1:63041994-63042013 Msa1206160:intron 45.0%
ACTGCAAATCCTCCTCACTT+CGG + chr8_1:63042128-63042147 None:intergenic 45.0%
TTCAGACGAAGACTCTGCTA+TGG - chr8_1:63042179-63042198 Msa1206160:intron 45.0%
! TCTGAGGACCCAACCAATTT+TGG + chr8_1:63042288-63042307 None:intergenic 45.0%
!! TATCACTGGTTCAGTTCGGA+TGG - chr8_1:63042629-63042648 Msa1206160:exon 45.0%
! GGCACCGAGCAACAATTCAA+CGG - chr8_1:63034914-63034933 Msa1206160:three_prime_UTR 50.0%
CCGGTGAATTGGTTAGACCT+AGG + chr8_1:63034953-63034972 None:intergenic 50.0%
AGGTCTAACCAATTCACCGG+TGG - chr8_1:63034953-63034972 Msa1206160:three_prime_UTR 50.0%
CAATTCACCGGTGGCTTCAT+CGG - chr8_1:63034962-63034981 Msa1206160:three_prime_UTR 50.0%
GTGGCAATGTTGCTCGTTCT+AGG - chr8_1:63035030-63035049 Msa1206160:three_prime_UTR 50.0%
TTTACGCGAGTGGTATGACG+TGG + chr8_1:63035464-63035483 None:intergenic 50.0%
! ATGCCCTCTGAAGGGTGTAT+CGG - chr8_1:63036501-63036520 Msa1206160:intron 50.0%
!! CCAGAAGATGGAGTGTTGTC+AGG + chr8_1:63036802-63036821 None:intergenic 50.0%
CCTGACAACACTCCATCTTC+TGG - chr8_1:63036799-63036818 Msa1206160:intron 50.0%
GTAACTTACATTGACGGGGG+TGG + chr8_1:63036856-63036875 None:intergenic 50.0%
GTCTCAAACTCTACGGCAAG+AGG - chr8_1:63037157-63037176 Msa1206160:intron 50.0%
TAAGCGTAACTCCATGAGGC+TGG - chr8_1:63037342-63037361 Msa1206160:intron 50.0%
AAGCGTAACTCCATGAGGCT+GGG - chr8_1:63037343-63037362 Msa1206160:intron 50.0%
GCATAGTCATCACCCTGAGT+TGG - chr8_1:63037579-63037598 Msa1206160:intron 50.0%
CTTGACTTAGAGCCCAACTC+AGG + chr8_1:63037595-63037614 None:intergenic 50.0%
!! CTGAGTTGGGCTCTAAGTCA+AGG - chr8_1:63037593-63037612 Msa1206160:intron 50.0%
TTGATGCCAAGGCAGAGTAC+AGG + chr8_1:63037825-63037844 None:intergenic 50.0%
GCATCAAGTCTGGCCACATT+TGG - chr8_1:63037838-63037857 Msa1206160:intron 50.0%
CAAGTCTGGCCACATTTGGT+TGG - chr8_1:63037842-63037861 Msa1206160:intron 50.0%
AGCAACCAGCCAACCAAATG+TGG + chr8_1:63037854-63037873 None:intergenic 50.0%
TAGACTGCAGAGGCAGAATG+TGG - chr8_1:63037983-63038002 Msa1206160:intron 50.0%
ATAAGTCCAGAGGTCGTCCT+CGG + chr8_1:63038271-63038290 None:intergenic 50.0%
AGCCAATGTGTGAGATCGTG+TGG - chr8_1:63038749-63038768 Msa1206160:intron 50.0%
!!! AGAGCCTTGTTTTGTGGGTC+AGG - chr8_1:63038879-63038898 Msa1206160:intron 50.0%
TGGTCCTGACCCACAAAACA+AGG + chr8_1:63038886-63038905 None:intergenic 50.0%
!!! TCGTTTTAAGAACCGGGTCG+TGG + chr8_1:63038906-63038925 None:intergenic 50.0%
CTTTCTACTAAAGGGGGCCT+CGG - chr8_1:63039046-63039065 Msa1206160:intron 50.0%
AAGATCACGGGTTCAAGTCC+TGG - chr8_1:63039092-63039111 Msa1206160:intron 50.0%
! CAAATGGTGGGACCCTTTAC+CGG - chr8_1:63039161-63039180 Msa1206160:intron 50.0%
!! AATCGCAAAGTACCGTGTGC+GGG + chr8_1:63039651-63039670 None:intergenic 50.0%
TGAGTGGCGAGAAGATTGAC+AGG + chr8_1:63039754-63039773 None:intergenic 50.0%
TGCGCTTACTTAGCCATGTG+TGG + chr8_1:63039870-63039889 None:intergenic 50.0%
!! CCCATAACTGGTCTTGGATC+TGG - chr8_1:63039911-63039930 Msa1206160:intron 50.0%
! GTAATGGGAGACAAGTCGTG+AGG + chr8_1:63039971-63039990 None:intergenic 50.0%
!! GTATGGTTGATGGGCGTATC+CGG - chr8_1:63040049-63040068 Msa1206160:intron 50.0%
AACAACAAGCCGGTCCTTTC+GGG + chr8_1:63040206-63040225 None:intergenic 50.0%
GATGTCTCTAGTAGCCAGGA+CGG - chr8_1:63040416-63040435 Msa1206160:intron 50.0%
GAGACATCAATGATCCGTCC+TGG + chr8_1:63040433-63040452 None:intergenic 50.0%
!! CAGATTGGCTTACCAAGCTC+TGG - chr8_1:63040658-63040677 Msa1206160:intron 50.0%
TAACAAAGCCCGAAGTGAGG+AGG - chr8_1:63042116-63042135 Msa1206160:intron 50.0%
CTGCAAATCCTCCTCACTTC+GGG + chr8_1:63042127-63042146 None:intergenic 50.0%
GGAGGATTTGCAGTCATGCT+TGG - chr8_1:63042134-63042153 Msa1206160:intron 50.0%
GGATTTGCAGTCATGCTTGG+AGG - chr8_1:63042137-63042156 Msa1206160:intron 50.0%
CTCGCACGCGGTTAAGCAAA+GGG - chr8_1:63034674-63034693 Msa1206160:three_prime_UTR 55.0%
CGATGAAGCCACCGGTGAAT+TGG + chr8_1:63034964-63034983 None:intergenic 55.0%
ACTGAAGCTAGGGGGACCAT+AGG - chr8_1:63035714-63035733 Msa1206160:CDS 55.0%
CTGAAGCTAGGGGGACCATA+GGG - chr8_1:63035715-63035734 Msa1206160:CDS 55.0%
GAGCCGATACACCCTTCAGA+GGG + chr8_1:63036507-63036526 None:intergenic 55.0%
AGAGCCGATACACCCTTCAG+AGG + chr8_1:63036508-63036527 None:intergenic 55.0%
CATTGACGGGGGTGGTTCAA+AGG + chr8_1:63036848-63036867 None:intergenic 55.0%
ACTCTACGGCAAGAGGTAGC+AGG - chr8_1:63037164-63037183 Msa1206160:intron 55.0%
GATGAAAGCTCCCAGCCTCA+TGG + chr8_1:63037356-63037375 None:intergenic 55.0%
!! TGGGCTCTAAGTCAAGGGCT+TGG - chr8_1:63037599-63037618 Msa1206160:intron 55.0%
CTCTGCCTTGGCATCAAGTC+TGG - chr8_1:63037828-63037847 Msa1206160:intron 55.0%
TGTGGCCAGACTTGATGCCA+AGG + chr8_1:63037836-63037855 None:intergenic 55.0%
TCTGGCCACATTTGGTTGGC+TGG - chr8_1:63037846-63037865 Msa1206160:intron 55.0%
GTCTACGCCCATCAGCTTGT+AGG + chr8_1:63037968-63037987 None:intergenic 55.0%
! GGTTGGTCAGTTATGGGGGT+CGG + chr8_1:63038045-63038064 None:intergenic 55.0%
GAATCACTAACAGGGACCCG+AGG - chr8_1:63038251-63038270 Msa1206160:intron 55.0%
TAAGTCCAGAGGTCGTCCTC+GGG + chr8_1:63038270-63038289 None:intergenic 55.0%
! TTATAGCTTGTCGCCGCCAG+CGG + chr8_1:63038480-63038499 None:intergenic 55.0%
TCAGGTCAGGTGACAACACC+CGG + chr8_1:63038665-63038684 None:intergenic 55.0%
GTCTTGTCGAGATCGCGCAT+GGG - chr8_1:63038789-63038808 Msa1206160:intron 55.0%
ACAAATTGGCTGGAAGCGGC+TGG - chr8_1:63038819-63038838 Msa1206160:intron 55.0%
CAAATTGGCTGGAAGCGGCT+GGG - chr8_1:63038820-63038839 Msa1206160:intron 55.0%
CGGTAAAGGGTCCCACCATT+TGG + chr8_1:63039163-63039182 None:intergenic 55.0%
CATACGCAGGGTCCGGTAAA+GGG + chr8_1:63039176-63039195 None:intergenic 55.0%
CTAAAGCCCCAGCATACGCA+GGG + chr8_1:63039188-63039207 None:intergenic 55.0%
ACTAAAGCCCCAGCATACGC+AGG + chr8_1:63039189-63039208 None:intergenic 55.0%
! ATGCTGGGGCTTTAGTGCAC+TGG - chr8_1:63039193-63039212 Msa1206160:intron 55.0%
CTCTGGGCCAGCTTGGATTA+TGG - chr8_1:63040675-63040694 Msa1206160:intron 55.0%
GGATGTGTCTTCTGCATCGG+AGG - chr8_1:63041843-63041862 Msa1206160:intron 55.0%
CTTAACCGCGTGCGAGCGTT+GGG + chr8_1:63034670-63034689 None:intergenic 60.0%
GCTCGCACGCGGTTAAGCAA+AGG - chr8_1:63034673-63034692 Msa1206160:three_prime_UTR 60.0%
ACGGCGAAAGTCGGAACCCT+AGG - chr8_1:63034933-63034952 Msa1206160:three_prime_UTR 60.0%
! TCGGCGCCGAAATCTCAACG+CGG - chr8_1:63034981-63035000 Msa1206160:three_prime_UTR 60.0%
AGTGGGGCAGCACCAGAAGA+TGG + chr8_1:63036814-63036833 None:intergenic 60.0%
! CTGATGGGCGTAGACTGCAG+AGG - chr8_1:63037973-63037992 Msa1206160:intron 60.0%
! GGTCTTGTCGAGATCGCGCA+TGG - chr8_1:63038788-63038807 Msa1206160:intron 60.0%
GCATACGCAGGGTCCGGTAA+AGG + chr8_1:63039177-63039196 None:intergenic 60.0%
TTACCGGACCCTGCGTATGC+TGG - chr8_1:63039177-63039196 Msa1206160:intron 60.0%
TACCGGACCCTGCGTATGCT+GGG - chr8_1:63039178-63039197 Msa1206160:intron 60.0%
!! TACCAAGCTCTGGGCCAGCT+TGG - chr8_1:63040668-63040687 Msa1206160:intron 60.0%
ATCCAAGCTGGCCCAGAGCT+TGG + chr8_1:63040673-63040692 None:intergenic 60.0%
!! CGCGTGCGAGCGTTGGGTTT+CGG + chr8_1:63034664-63034683 None:intergenic 65.0%
CGAAACCCAACGCTCGCACG+CGG - chr8_1:63034662-63034681 Msa1206160:three_prime_UTR 65.0%
GCTTAACCGCGTGCGAGCGT+TGG + chr8_1:63034671-63034690 None:intergenic 65.0%
!! TTCGGCGCCGATGAAGCCAC+CGG + chr8_1:63034972-63034991 None:intergenic 65.0%
GCGGCTGCAATGAACCCCAG+TGG + chr8_1:63038461-63038480 None:intergenic 65.0%
CTGGGGTTCATTGCAGCCGC+TGG - chr8_1:63038461-63038480 Msa1206160:intron 65.0%
GGGTTCATTGCAGCCGCTGG+CGG - chr8_1:63038464-63038483 Msa1206160:intron 65.0%
TGTGGGTCAGGACCACGACC+CGG - chr8_1:63038891-63038910 Msa1206160:intron 65.0%
ACCGGACCCTGCGTATGCTG+GGG - chr8_1:63039179-63039198 Msa1206160:intron 65.0%
AGGGACCCGAGGACGACCTC+TGG - chr8_1:63038262-63038281 Msa1206160:intron 70.0%
GCCCCAGCATACGCAGGGTC+CGG + chr8_1:63039183-63039202 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63034637 63042912 63034637 ID=Msa1206160;Name=Msa1206160
chr8_1 mRNA 63034637 63042912 63034637 ID=Msa1206160-mRNA-1;Parent=Msa1206160;Name=Msa1206160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=269|1|1|1|0.75|1|5|535|359
chr8_1 exon 63034637 63035852 63034637 ID=Msa1206160-mRNA-1:exon:20431;Parent=Msa1206160-mRNA-1
chr8_1 exon 63035951 63036053 63035951 ID=Msa1206160-mRNA-1:exon:20430;Parent=Msa1206160-mRNA-1
chr8_1 exon 63040683 63040770 63040683 ID=Msa1206160-mRNA-1:exon:20429;Parent=Msa1206160-mRNA-1
chr8_1 exon 63042354 63042415 63042354 ID=Msa1206160-mRNA-1:exon:20428;Parent=Msa1206160-mRNA-1
chr8_1 exon 63042498 63042912 63042498 ID=Msa1206160-mRNA-1:exon:20427;Parent=Msa1206160-mRNA-1
chr8_1 five_prime_UTR 63042644 63042912 63042644 ID=Msa1206160-mRNA-1:five_prime_utr;Parent=Msa1206160-mRNA-1
chr8_1 CDS 63042498 63042643 63042498 ID=Msa1206160-mRNA-1:cds;Parent=Msa1206160-mRNA-1
chr8_1 CDS 63042354 63042415 63042354 ID=Msa1206160-mRNA-1:cds;Parent=Msa1206160-mRNA-1
chr8_1 CDS 63040683 63040770 63040683 ID=Msa1206160-mRNA-1:cds;Parent=Msa1206160-mRNA-1
chr8_1 CDS 63035951 63036053 63035951 ID=Msa1206160-mRNA-1:cds;Parent=Msa1206160-mRNA-1
chr8_1 CDS 63035172 63035852 63035172 ID=Msa1206160-mRNA-1:cds;Parent=Msa1206160-mRNA-1
chr8_1 three_prime_UTR 63034637 63035171 63034637 ID=Msa1206160-mRNA-1:three_prime_utr;Parent=Msa1206160-mRNA-1
Gene Sequence

>Msa1206160

ATGGCGACGGCACCGAGCAACAATTCAACGGCGAAAGTCGGAACCCTAGGTCTAACCAATTCACCGGTGGCTTCATCGGCGCCGAAATCTCAACGCGGTCAGAACAAACCTAAGTGCAAACAGTGTGGCAATGTTGCTCGTTCTAGGTGTCCTTATGAGCAATGCAAGAGTTGCTGTTCCAAGAATCAAAATCCTTGTCCGATTCATGTGTTAAAAGCCAGTACAATTCCTGACAACACTCCATCTTCTGGTGCTGCCCCACTTGATCGAAAATCCTTTGAACCACCCCCGTCAATAAGTGCTGGTAGAGCTGCGTCACTTCGACAACTTTCCAATAGTTTTGCTCAGTTCAATAATTTGCATCTTTCACTTCGATCAAAGAAGCCATTAACTAGAAAGGATGCTGCAGCTATCAATGAATGGAGGTTTTCCAAGTTAAAGGAATACAAGGAGCGAAATGTTGAAGCGGAAAATGAAGCCTTTGACCGATACATGCAAAATGTAGATTTGCTGGAAGAAGTATTATCTGTGAAGCATTCAGATGAGGATGTGTCTTCTGCATCGGAGGCTAATCCTACCTCGACAGAGAACAATGAGGTAATGATCCCTGGGTTAAAATTGCAACTAAGGTCAAACTCGACGAGAAGTGATGGTGTTAGAATAAGAATAAAAAAAACTGTAGATGATGGATTGAAGAAGCTCAAGTCTGCTGTAGATGGTGACAGCAATAATGAACAAATCGATGAAGTTAGTGAATCTTCGAATAAGAGAAAGAGGACCGAAAAGTTATCAGCTATAAGTGATCTTCTGGACAAAATTAACAAAGCCCGAAGTGAGGAGGATTTGCAGTCATGCTTGGAGGTGAAGTTACAGCTTTTCAATTCAGACGAAGACTCTGCTATGGTGCAACACACAGACAATGAAATGCATCAGAATCAAACTGCTGAAGGCGATGTTGTACCAGCAAAAGAATTGGATTACTCGTTACCAAAATTGGTTGGGTCCTCAGAAATTGATCAAGAAACTCTCAACATCATTGACAAACACTTTTCTTCTCTCGAGAATGTAGAGCAGTTATGA
Protein sequence

>Msa1206160

MATAPSNNSTAKVGTLGLTNSPVASSAPKSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKASTIPDNTPSSGAAPLDRKSFEPPPSISAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLKEYKERNVEAENEAFDRYMQNVDLLEEVLSVKHSDEDVSSASEANPTSTENNEVMIPGLKLQLRSNSTRSDGVRIRIKKTVDDGLKKLKSAVDGDSNNEQIDEVSESSNKRKRTEKLSAISDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTAEGDVVPAKELDYSLPKLVGSSEIDQETLNIIDKHFSSLENVEQL*