AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0487780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487780 MtrunA17_Chr3g0077321 89.929 566 47 4 1 560 1 562 0.0 989
Msa0487780 MtrunA17_Chr4g0043911 53.091 550 220 8 6 543 25 548 0.0 592
Msa0487780 MtrunA17_Chr1g0160781 53.551 521 211 8 32 542 47 546 0.0 574
Msa0487780 MtrunA17_Chr5g0424241 52.663 507 217 6 48 544 68 561 0.0 530
Msa0487780 MtrunA17_Chr4g0056061 38.085 449 246 12 106 544 65 491 1.89e-87 280
Msa0487780 MtrunA17_Chr5g0399311 37.615 436 240 11 119 544 94 507 3.50e-86 276
Msa0487780 MtrunA17_Chr5g0412251 35.931 462 243 13 118 543 58 502 3.12e-82 265
Msa0487780 MtrunA17_Chr3g0123521 36.706 425 252 11 130 543 130 548 4.01e-81 264
Msa0487780 MtrunA17_Chr3g0143821 36.952 433 241 12 121 543 83 493 3.25e-80 262
Msa0487780 MtrunA17_Chr2g0284071 35.470 468 249 13 120 544 185 642 3.59e-79 261
Msa0487780 MtrunA17_Chr3g0132951 34.279 458 248 13 122 543 76 516 1.21e-77 254
Msa0487780 MtrunA17_Chr5g0426591 31.934 548 323 15 32 556 5 525 9.53e-77 252
Msa0487780 MtrunA17_Chr5g0448581 35.648 432 245 11 122 543 92 500 4.42e-76 251
Msa0487780 MtrunA17_Chr3g0132371 32.407 540 304 18 43 547 30 543 4.27e-75 248
Msa0487780 MtrunA17_Chr4g0075311 34.071 452 256 13 130 545 149 594 3.30e-72 241
Msa0487780 MtrunA17_Chr3g0129981 33.108 444 252 11 122 542 90 511 1.18e-67 228
Msa0487780 MtrunA17_Chr4g0070551 34.293 417 231 11 145 543 227 618 6.40e-66 226
Msa0487780 MtrunA17_Chr2g0307971 34.135 416 246 10 136 539 105 504 8.03e-65 220
Msa0487780 MtrunA17_Chr4g0061781 33.882 425 250 11 138 550 108 513 1.38e-64 219
Msa0487780 MtrunA17_Chr4g0008451 32.511 446 249 15 122 544 207 623 1.89e-64 222
Msa0487780 MtrunA17_Chr6g0455571 34.545 385 232 9 134 512 103 473 1.21e-63 217
Msa0487780 MtrunA17_Chr1g0204141 32.967 455 268 19 114 553 55 487 5.18e-63 215
Msa0487780 MtrunA17_Chr1g0204121 32.373 451 273 15 114 553 55 484 6.02e-63 215
Msa0487780 MtrunA17_Chr5g0436321 33.652 419 231 14 146 544 161 552 6.04e-63 216
Msa0487780 MtrunA17_Chr5g0417871 32.877 438 260 16 134 555 68 487 1.05e-59 206
Msa0487780 MtrunA17_Chr4g0042711 32.524 412 246 11 146 543 97 490 1.39e-58 203
Msa0487780 MtrunA17_Chr3g0087291 30.787 432 269 11 122 542 144 556 2.06e-48 176
Msa0487780 MtrunA17_Chr4g0010511 30.653 398 255 8 149 542 236 616 1.00e-45 170
Msa0487780 MtrunA17_Chr4g0003561 27.543 403 247 11 108 496 32 403 4.89e-38 145
Msa0487780 MtrunA17_Chr7g0220381 27.812 320 198 10 145 446 97 401 4.99e-24 106
Msa0487780 MtrunA17_Chr1g0146501 26.613 248 172 3 195 438 144 385 9.07e-22 99.4
Msa0487780 MtrunA17_Chr3g0127811 26.446 242 168 3 203 440 112 347 4.83e-21 96.3
Msa0487780 MtrunA17_Chr7g0240241 35.338 133 76 4 316 445 6 131 8.13e-17 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487780 AT1G35510.1 61.404 570 196 6 1 551 1 565 0.0 703
Msa0487780 AT2G01480.1 51.730 549 232 8 6 544 28 553 0.0 581
Msa0487780 AT1G14970.1 51.434 523 223 7 32 544 53 554 0.0 561
Msa0487780 AT1G38131.1 52.767 506 209 7 52 542 67 557 0.0 535
Msa0487780 AT2G01480.2 51.172 512 217 8 6 507 28 516 0.0 531
Msa0487780 AT1G14970.2 56.000 425 168 3 129 544 20 434 2.51e-179 513
Msa0487780 AT1G38065.2 56.808 426 170 3 131 542 3 428 9.59e-177 507
Msa0487780 AT1G14970.3 56.691 411 161 2 143 544 6 408 4.39e-176 504
Msa0487780 AT1G38065.1 58.809 403 160 2 146 542 36 438 9.12e-176 505
Msa0487780 AT3G26370.1 38.118 425 246 11 130 543 138 556 3.21e-85 275
Msa0487780 AT1G29200.4 34.744 449 256 10 129 543 49 494 6.29e-81 262
Msa0487780 AT1G29200.1 34.744 449 256 10 129 543 49 494 6.29e-81 262
Msa0487780 AT5G65470.1 35.870 460 238 14 122 542 61 502 1.15e-80 262
Msa0487780 AT4G38390.1 36.406 434 251 11 122 548 96 511 3.73e-80 262
Msa0487780 AT1G29200.2 34.744 449 256 10 129 543 165 610 1.39e-79 262
Msa0487780 AT4G24530.1 34.354 457 255 12 119 543 74 517 4.23e-79 258
Msa0487780 AT1G76270.1 34.462 502 270 15 83 559 40 507 3.50e-78 257
Msa0487780 AT4G16650.2 35.550 436 249 11 119 544 92 505 1.10e-77 255
Msa0487780 AT4G16650.1 35.550 436 249 11 119 544 92 505 1.10e-77 255
Msa0487780 AT1G20550.1 36.765 408 234 9 145 548 108 495 1.55e-75 250
Msa0487780 AT1G22460.1 34.152 448 250 9 120 544 134 559 4.24e-75 249
Msa0487780 AT1G29200.3 34.515 423 244 9 151 543 1 420 9.93e-74 241
Msa0487780 AT1G62330.1 33.547 468 254 14 122 544 196 651 1.03e-70 239
Msa0487780 AT1G11990.1 34.988 423 256 11 130 542 175 588 7.83e-69 233
Msa0487780 AT5G64600.1 32.444 450 241 13 132 549 103 521 4.13e-68 229
Msa0487780 AT5G35570.1 32.613 463 262 14 106 546 210 644 1.77e-66 228
Msa0487780 AT5G01100.1 32.743 452 260 13 115 546 185 612 7.50e-65 223
Msa0487780 AT1G11990.2 32.675 456 259 12 130 542 160 610 5.82e-64 220
Msa0487780 AT1G14020.1 34.223 412 239 11 146 543 91 484 1.88e-63 216
Msa0487780 AT1G04910.1 32.584 445 270 14 114 548 55 479 8.68e-63 215
Msa0487780 AT2G03280.1 36.000 375 217 8 146 513 88 446 9.75e-63 214
Msa0487780 AT2G37980.1 31.486 451 267 14 116 548 195 621 8.28e-62 215
Msa0487780 AT3G54100.1 31.486 451 267 14 116 548 191 617 4.16e-61 213
Msa0487780 AT2G03280.2 34.158 404 212 10 146 513 88 473 1.07e-60 209
Msa0487780 AT5G15740.1 33.079 393 241 9 137 523 97 473 4.46e-60 207
Msa0487780 AT3G02250.1 33.596 381 235 8 137 512 97 464 8.07e-59 204
Msa0487780 AT2G44500.1 30.258 466 270 13 112 553 138 572 8.16e-51 184
Msa0487780 AT5G63390.1 29.318 440 270 12 122 544 135 550 5.88e-47 173
Msa0487780 AT3G07900.1 28.604 437 277 12 122 544 159 574 1.86e-44 166
Msa0487780 AT1G52630.1 26.667 450 261 12 112 543 38 436 6.10e-38 145
Msa0487780 AT3G26370.2 34.583 240 145 7 130 360 138 374 3.12e-34 134
Msa0487780 AT1G52630.2 26.944 360 205 9 195 543 36 348 1.05e-30 123
Msa0487780 AT3G03810.2 27.095 358 230 10 117 452 50 398 1.07e-26 115
Msa0487780 AT3G03810.1 27.095 358 230 10 117 452 50 398 1.07e-26 115
Msa0487780 AT3G30300.2 26.101 318 202 10 145 444 99 401 5.43e-24 107
Msa0487780 AT3G30300.1 26.101 318 202 10 145 444 99 401 5.43e-24 107
Msa0487780 AT2G44500.2 30.677 251 133 9 149 384 180 404 3.80e-18 87.4
Msa0487780 AT3G21190.1 22.997 287 173 6 194 475 138 381 1.02e-14 77.0

Find 155 sgRNAs with CRISPR-Local

Find 860 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTGAAACCTTAGTTTA+TGG 0.135680 3_4:+6915421 None:intergenic
AGAAGAGCTTGCTCAATTTA+AGG 0.161428 3_4:-6916926 Msa0487780:intron
ATAATATTTCTAAACTAATT+TGG 0.166795 3_4:+6915144 None:intergenic
TGCTGGAATGTTATTGTATA+TGG 0.184989 3_4:-6926250 Msa0487780:CDS
ATTGAGAGAAGTTGAATTAT+TGG 0.195868 3_4:+6926089 None:intergenic
CGCCATTTGCTTCAATTATA+AGG 0.198521 3_4:+6925455 None:intergenic
TTAAATTGAGCAAGCTCTTC+TGG 0.230717 3_4:+6916928 None:intergenic
CTCAACTCTTTCATAATCTT+TGG 0.230844 3_4:-6926143 Msa0487780:CDS
GAAGGTTCTTCCTCAGCTTT+TGG 0.238304 3_4:-6920753 Msa0487780:CDS
AATAAAACTCTTCCTCAAAT+AGG 0.255319 3_4:-6925742 Msa0487780:intron
ACATTCCAGCAATATATAAT+AGG 0.255492 3_4:+6926262 None:intergenic
CTTTCACACTTATAATTTCA+TGG 0.277693 3_4:+6915548 None:intergenic
CATAACAAGATATACAAATT+TGG 0.289842 3_4:+6926326 None:intergenic
TCAAAGCTGTACCTTATGTT+AGG 0.294651 3_4:+6916639 None:intergenic
AACATATTTCCCACCACTTT+GGG 0.297173 3_4:+6918243 None:intergenic
CTTAGGTGCTTTGCCAACTT+TGG 0.319483 3_4:-6918337 Msa0487780:CDS
CATTCCAGCAATATATAATA+GGG 0.328155 3_4:+6926263 None:intergenic
AAATTTGGACCATGATGATT+TGG 0.331205 3_4:+6926341 None:intergenic
CTTTCTGCAAGCGTTCTAAT+AGG 0.337272 3_4:+6918295 None:intergenic
AGGAGGAAGACGATGGTGTT+TGG 0.345921 3_4:+6926197 None:intergenic
TAAGATGACTTCCGACGTTC+AGG 0.346330 3_4:+6921201 None:intergenic
CCTTCATCTTGCAGCCATTT+CGG 0.349842 3_4:-6920935 Msa0487780:intron
CTGGCATGGGAAAAGTATAT+AGG 0.357947 3_4:+6915625 None:intergenic
GGCCTCGGTGGCGTCGGTGC+TGG 0.370663 3_4:-6926378 Msa0487780:CDS
AGTGTGAAAGAATTGTCTTT+AGG 0.372445 3_4:-6915535 Msa0487780:three_prime_UTR
TGGCATGGGAAAAGTATATA+GGG 0.398453 3_4:+6915626 None:intergenic
GCACCCCTATTATATATTGC+TGG 0.399098 3_4:-6926267 Msa0487780:CDS
ATCGGATCTATCTATCTGTT+TGG 0.401563 3_4:-6926446 Msa0487780:five_prime_UTR
AACTGTTGAAGTATGTCATC+TGG 0.405679 3_4:+6920845 None:intergenic
AGCGGCGGCCTCGGTGGCGT+CGG 0.405981 3_4:-6926384 Msa0487780:CDS
AGCGGCTGTACCCATGCATT+TGG 0.406106 3_4:+6926421 None:intergenic
ACCTGTTTACACATGCAATC+TGG 0.408261 3_4:+6915606 None:intergenic
AAACATATTTCCCACCACTT+TGG 0.408641 3_4:+6918242 None:intergenic
CTCACTTCTTGATGGGTCAC+AGG 0.413756 3_4:-6916734 Msa0487780:CDS
AGGAGTAAGAGCGGCGGCCT+CGG 0.414594 3_4:-6926393 Msa0487780:CDS
CATCGAAAATGTCACCGAAA+TGG 0.420415 3_4:+6920921 None:intergenic
GCTTCGCCATAGTGATCAAA+AGG 0.428810 3_4:-6915676 Msa0487780:CDS
CTTCAAAATATATTATTAGC+AGG 0.435038 3_4:-6914989 None:intergenic
TCCAGCTGCAACATATACTA+AGG 0.440136 3_4:+6917032 None:intergenic
ATGGTTTAATTTCAGCACTT+TGG 0.440740 3_4:+6926672 None:intergenic
TACCTTATAATTGAAGCAAA+TGG 0.440785 3_4:-6925457 Msa0487780:CDS
GCTGGAATGTTATTGTATAT+GGG 0.443252 3_4:-6926249 Msa0487780:CDS
GCTGAATCAGCAACGCTTGT+CGG 0.455217 3_4:-6925431 Msa0487780:intron
AGTTGAATTATTGGAAGAGA+AGG 0.458923 3_4:+6926098 None:intergenic
ATGCATGGGTACAGCCGCTT+GGG 0.460172 3_4:-6926417 Msa0487780:CDS
CAGGTAGGGATGATGCTTAG+AGG 0.461529 3_4:-6917075 Msa0487780:CDS
AGAGAACCAGGAGGAGGAGG+AGG 0.462286 3_4:+6926177 None:intergenic
TGATGCAGGGCCACTCATCT+AGG 0.467062 3_4:-6916827 Msa0487780:intron
TGGAGAAAAGCCATAAACTA+AGG 0.467106 3_4:-6915431 Msa0487780:three_prime_UTR
TAAACCTGATAAAAGAAGAT+TGG 0.467496 3_4:-6916679 Msa0487780:CDS
TGAATTATTGGAAGAGAAGG+AGG 0.468813 3_4:+6926101 None:intergenic
AGTTATTGGTATAAATAAGA+AGG 0.471614 3_4:-6915045 Msa0487780:three_prime_UTR
CAAAGCTGTACCTTATGTTA+GGG 0.472564 3_4:+6916640 None:intergenic
GCCAGATTGCATGTGTAAAC+AGG 0.473337 3_4:-6915607 Msa0487780:CDS
CATGCACTGCTAATCTGAAA+AGG 0.479325 3_4:+6915088 None:intergenic
TTAGAATTTCCCAAGTCAAA+TGG 0.479932 3_4:-6925481 Msa0487780:intron
CATATCTAGCACTATTCACT+TGG 0.485998 3_4:-6921245 Msa0487780:intron
CATTGGTTAAATGAACTGCT+TGG 0.486200 3_4:+6915231 None:intergenic
AAAGTAGTTTGATTCAAACT+TGG 0.487977 3_4:-6915451 Msa0487780:three_prime_UTR
CCATGATGATTTGGAAGAAG+AGG 0.490301 3_4:+6926350 None:intergenic
TGGCAAAGCACCTAAGCCCT+TGG 0.490647 3_4:+6918344 None:intergenic
CGTGGAAACATCTGTTTAAG+TGG 0.496809 3_4:+6916979 None:intergenic
CCATCCACACGATTTGCACC+AGG 0.499060 3_4:+6917204 None:intergenic
AAAATGAAAATGCTAACATT+GGG 0.499394 3_4:-6915575 Msa0487780:CDS
AATGCATGGGTACAGCCGCT+TGG 0.500838 3_4:-6926418 Msa0487780:CDS
TATAAGGTAACCATTTGACT+TGG 0.501455 3_4:+6925471 None:intergenic
TGATACAGTTAATGAAAGCT+TGG 0.504603 3_4:-6925801 Msa0487780:intron
ATGTCCTTTGACTCCGTTGG+AGG 0.506692 3_4:-6917178 Msa0487780:intron
TAAAGAGAACCAGGAGGAGG+AGG 0.509543 3_4:+6926174 None:intergenic
ACCTTAGTATATGTTGCAGC+TGG 0.511140 3_4:-6917033 Msa0487780:CDS
GAGGAGGAGGAGGAAGACGA+TGG 0.511245 3_4:+6926190 None:intergenic
TGAGTATGACGGTGGGGCAG+AGG 0.518193 3_4:-6917301 Msa0487780:CDS
GGCAGAGGAGAAACGTGAAA+TGG 0.518630 3_4:-6917286 Msa0487780:CDS
AATTTCTTCATACAGTCACT+TGG 0.519812 3_4:-6920896 Msa0487780:CDS
AAATGGATATCGCTCGTGAA+AGG 0.523973 3_4:-6917269 Msa0487780:CDS
GAAAGCTTGGAGTGTGAAAG+AGG 0.525362 3_4:-6925788 Msa0487780:CDS
TATTCGATAACCCTAACATA+AGG 0.526611 3_4:-6916650 Msa0487780:intron
AAGATGTCCTTTGACTCCGT+TGG 0.528532 3_4:-6917181 Msa0487780:CDS
TCAATCTTAGAGTAAAAGCT+TGG 0.528802 3_4:-6920799 Msa0487780:CDS
GAAGTATTTGTTACAACTCA+AGG 0.529110 3_4:-6916768 Msa0487780:CDS
AGGGATGATGCTTAGAGGCA+TGG 0.538115 3_4:-6917070 Msa0487780:CDS
TACTGATTGAGCTAATCTGT+TGG 0.540656 3_4:+6918378 None:intergenic
TTTACACATGCAATCTGGCA+TGG 0.541367 3_4:+6915611 None:intergenic
TCCAGCTCACTATCTTAAGA+AGG 0.541466 3_4:-6920771 Msa0487780:CDS
GCAGGGCCACTCATCTAGGT+TGG 0.545489 3_4:-6916823 Msa0487780:intron
GGTCACAGGAGATATATGTA+TGG 0.548227 3_4:-6916720 Msa0487780:CDS
CCTCTTCTTCCAAATCATCA+TGG 0.548733 3_4:-6926350 Msa0487780:CDS
GGGATGATGCTTAGAGGCAT+GGG 0.550201 3_4:-6917069 Msa0487780:CDS
ATAAGGTAACCATTTGACTT+GGG 0.551096 3_4:+6925472 None:intergenic
ATATCGCTCGTGAAAGGAGT+TGG 0.552846 3_4:-6917263 Msa0487780:CDS
TTGCAGAAAGCATGGTTGAT+CGG 0.558395 3_4:-6918282 Msa0487780:CDS
AAATCTAAGAGCTCCAAAGT+TGG 0.561506 3_4:+6918324 None:intergenic
GTGTGAAAGAGGATAGACAA+TGG 0.564266 3_4:-6925777 Msa0487780:CDS
ACAAGTCTGAACACAACTCA+AGG 0.565133 3_4:+6926643 None:intergenic
TTACACATGCAATCTGGCAT+GGG 0.565429 3_4:+6915612 None:intergenic
TCTGTTTGGATCCAAATGCA+TGG 0.566462 3_4:-6926432 Msa0487780:exon
TTCAAACAAGAAGAAGAAGA+AGG 0.566583 3_4:-6926521 Msa0487780:five_prime_UTR
CACAGGAGATATATGTATGG+TGG 0.569689 3_4:-6916717 Msa0487780:CDS
GAGGAGTCATTTAGCATGAA+AGG 0.570886 3_4:+6926120 None:intergenic
AGCATAGTTCCCAAAGTGGT+GGG 0.572143 3_4:-6918252 Msa0487780:CDS
CATACCTCCAACGGAGTCAA+AGG 0.575718 3_4:+6917174 None:intergenic
TCTGAACACAACTCAAGGGA+TGG 0.576981 3_4:+6926648 None:intergenic
ACCTTCTTAAGATAGTGAGC+TGG 0.578959 3_4:+6920770 None:intergenic
TTATAATTGAAGCAAATGGC+GGG 0.578963 3_4:-6925453 Msa0487780:CDS
CTGTTTGGATCCAAATGCAT+GGG 0.580454 3_4:-6926431 Msa0487780:exon
AAGCATAGGATAATAAAGCC+TGG 0.583107 3_4:-6917222 Msa0487780:CDS
ATTTCTTCATACAGTCACTT+GGG 0.583241 3_4:-6920895 Msa0487780:CDS
AATTAAGTGCATACCTCCAA+CGG 0.583495 3_4:+6917165 None:intergenic
TGTATGTGTGTGTGGTTGAG+AGG 0.585426 3_4:+6926613 None:intergenic
AGACACTCACTTATTGCCAT+CGG 0.586035 3_4:-6926464 Msa0487780:five_prime_UTR
ACAGGAGATATATGTATGGT+GGG 0.587238 3_4:-6916716 Msa0487780:CDS
ATGGGTACAGCCGCTTGGGA+AGG 0.592007 3_4:-6926413 Msa0487780:CDS
CTATAAAGAGAACCAGGAGG+AGG 0.595885 3_4:+6926171 None:intergenic
AAGCATAGTTCCCAAAGTGG+TGG 0.596503 3_4:-6918253 Msa0487780:CDS
CTTCGCCATAGTGATCAAAA+GGG 0.597132 3_4:-6915675 Msa0487780:CDS
ATTACAAACAAAAGATACAC+TGG 0.597403 3_4:-6916956 Msa0487780:CDS
CTTATAATTGAAGCAAATGG+CGG 0.597720 3_4:-6925454 Msa0487780:CDS
CTGAACACAACTCAAGGGAT+GGG 0.597930 3_4:+6926649 None:intergenic
TAGAACGCTTGCAGAAAGCA+TGG 0.602757 3_4:-6918290 Msa0487780:CDS
GTAAATTCAAAAGAAAGCAT+AGG 0.604272 3_4:-6917236 Msa0487780:CDS
TGAGCTAATCTGTTGGAGAA+AGG 0.608944 3_4:+6918385 None:intergenic
GAATTGAATGTATGTGTGTG+TGG 0.614786 3_4:+6926605 None:intergenic
CCTGGTGCAAATCGTGTGGA+TGG 0.618136 3_4:-6917204 Msa0487780:CDS
ACACAACTCAAGGGATGGGA+TGG 0.619119 3_4:+6926653 None:intergenic
CGCTCTTACTCCTTCCCAAG+CGG 0.620829 3_4:+6926403 None:intergenic
CATGTTGTGAGTATGACGGT+GGG 0.621484 3_4:-6917308 Msa0487780:CDS
GGACTTCTATAAAGAGAACC+AGG 0.623921 3_4:+6926165 None:intergenic
ATTCCAGCAATATATAATAG+GGG 0.624522 3_4:+6926264 None:intergenic
TTATAAAGAACAAAAGTACA+TGG 0.626962 3_4:-6917004 Msa0487780:CDS
CAAAGATTATGAAAGAGTTG+AGG 0.629535 3_4:+6926144 None:intergenic
CTAATTTGGCACATGACATG+AGG 0.630166 3_4:+6915158 None:intergenic
AGTAAGAGCGGCGGCCTCGG+TGG 0.631954 3_4:-6926390 Msa0487780:CDS
TCATGTTGTGAGTATGACGG+TGG 0.632511 3_4:-6917309 Msa0487780:CDS
AATGAATCTTCATCATCAGG+TGG 0.638613 3_4:+6915296 None:intergenic
CGCTTGGGAAGGAGTAAGAG+CGG 0.641063 3_4:-6926402 Msa0487780:CDS
GAGCAGCCAACCTAGATGAG+TGG 0.642905 3_4:+6916817 None:intergenic
AGAAAGCATGGTTGATCGGA+TGG 0.644563 3_4:-6918278 Msa0487780:CDS
AAACAGATAGATAGATCCGA+TGG 0.645033 3_4:+6926448 None:intergenic
CACCTCATTTCCAAAAGCTG+AGG 0.645775 3_4:+6920743 None:intergenic
GCTCGTGAAAGGAGTTGGCG+AGG 0.646861 3_4:-6917258 Msa0487780:CDS
ATAAATCAGAGAAAATGAGA+AGG 0.649794 3_4:+6915386 None:intergenic
CTGTGACCCATCAAGAAGTG+AGG 0.654052 3_4:+6916735 None:intergenic
AGCTGCAACATATACTAAGG+TGG 0.658104 3_4:+6917035 None:intergenic
CAAGTCTGAACACAACTCAA+GGG 0.662145 3_4:+6926644 None:intergenic
GCTTGGTCTAGTAACTTGAG+TGG 0.668174 3_4:+6915248 None:intergenic
ACTTGGGAAGCATGTACATG+TGG 0.671732 3_4:-6920879 Msa0487780:CDS
AAAGCCTGGTGCAAATCGTG+TGG 0.676415 3_4:-6917208 Msa0487780:CDS
GTGAAGCATAGTTCCCAAAG+TGG 0.676949 3_4:-6918256 Msa0487780:CDS
TTCCAGCACCGACGCCACCG+AGG 0.689231 3_4:+6926376 None:intergenic
CAATCGAATATCCTGAACGT+CGG 0.689929 3_4:-6921212 Msa0487780:CDS
TAGTGATCAAAAGGGAACCG+AGG 0.701242 3_4:-6915667 Msa0487780:CDS
TTGGGAAGGAGTAAGAGCGG+CGG 0.722162 3_4:-6926399 Msa0487780:CDS
GTATTTGTTACAACTCAAGG+TGG 0.726210 3_4:-6916765 Msa0487780:CDS
ATGTTGTGAGTATGACGGTG+GGG 0.735863 3_4:-6917307 Msa0487780:CDS
CTTCTATAAAGAGAACCAGG+AGG 0.765534 3_4:+6926168 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTAAATAAATTAATGAT+TGG + chr3_4:6916297-6916316 None:intergenic 10.0%
!! AATCATTAATTTATTTAGTT+AGG - chr3_4:6916296-6916315 Msa0487780:intron 10.0%
!! ATTTACTTAAAAAAAATTCA+AGG + chr3_4:6920071-6920090 None:intergenic 10.0%
!! ATAAGTAAAAATTAAGAAAA+CGG + chr3_4:6920291-6920310 None:intergenic 10.0%
!!! AATTTTTACTTATTTATCTA+TGG - chr3_4:6920298-6920317 Msa0487780:intron 10.0%
!! ATTCTTAATAAACATATAAA+GGG - chr3_4:6921980-6921999 Msa0487780:intron 10.0%
!!! CTAGATAATTTATTTTATTT+TGG - chr3_4:6923608-6923627 Msa0487780:intron 10.0%
!!! ATAAAATTTTGAAAATTAGT+AGG + chr3_4:6925264-6925283 None:intergenic 10.0%
!!! TAATTTTCAAAATTTTATGA+TGG - chr3_4:6925266-6925285 Msa0487780:intron 10.0%
!! AAGAAATTAGAATAATTAAA+AGG + chr3_4:6925531-6925550 None:intergenic 10.0%
!!! ACTAAGTAAAATAATAATTT+TGG - chr3_4:6925667-6925686 Msa0487780:intron 10.0%
!!! ATAATATTTCTAAACTAATT+TGG + chr3_4:6926526-6926545 None:intergenic 10.0%
!! TTTATTACTTAAAAAGTTAT+TGG - chr3_4:6926608-6926627 Msa0487780:five_prime_UTR 10.0%
!! ATTGGTAAAAATGAAATATT+TGG + chr3_4:6916279-6916298 None:intergenic 15.0%
!! TAATTTATTTAGTTAGGATT+AGG - chr3_4:6916302-6916321 Msa0487780:intron 15.0%
!! AGATTATAGCATAATAATAA+GGG + chr3_4:6917016-6917035 None:intergenic 15.0%
!!! TCTATATTTTATGCTATTTT+TGG + chr3_4:6918397-6918416 None:intergenic 15.0%
!! AGATTATAGCATAATAATAA+GGG + chr3_4:6917016-6917035 None:intergenic 15.0%
!! ACACTATTTAAATGAAATAT+TGG + chr3_4:6919768-6919787 None:intergenic 15.0%
!! TATTTCATTTAAATAGTGTA+TGG - chr3_4:6919769-6919788 Msa0487780:intron 15.0%
!! AATAATTGAACTTTGTTAAA+AGG + chr3_4:6921043-6921062 None:intergenic 15.0%
!! AATAGATTTGATATAACTTA+TGG - chr3_4:6921244-6921263 Msa0487780:intron 15.0%
!!! TGTTTTTTCTTCTTAAATAT+GGG + chr3_4:6921824-6921843 None:intergenic 15.0%
!!! TTGTTTTTTCTTCTTAAATA+TGG + chr3_4:6921825-6921844 None:intergenic 15.0%
!! CATTCTTAATAAACATATAA+AGG - chr3_4:6921979-6921998 Msa0487780:intron 15.0%
!! TCTATATATAAGAAAAAACA+TGG + chr3_4:6922082-6922101 None:intergenic 15.0%
!! TATGAATGAAAAATAAAGTT+TGG + chr3_4:6922446-6922465 None:intergenic 15.0%
!! TTTAAAAATGTTTACATCAT+TGG + chr3_4:6922755-6922774 None:intergenic 15.0%
!! TAATAGTAATCGAAATAAAA+AGG + chr3_4:6923173-6923192 None:intergenic 15.0%
!! GTAAATTATAATCATATAGT+AGG + chr3_4:6923665-6923684 None:intergenic 15.0%
!!! TATTGTCAATTTTTATTTTC+CGG - chr3_4:6923729-6923748 Msa0487780:intron 15.0%
!!! TTGTTATATTCTTTTATCAT+TGG + chr3_4:6926456-6926475 None:intergenic 15.0%
!!! TATATTTTGAAGAATTAGAA+AGG + chr3_4:6926670-6926689 None:intergenic 15.0%
!! CATAACAAGATATACAAATT+TGG + chr3_4:6915344-6915363 None:intergenic 20.0%
!! TTCATAAACTAATCCAAATA+TGG - chr3_4:6915716-6915735 Msa0487780:intron 20.0%
!!! GTGTATATATGTTAGTTTTT+CGG - chr3_4:6915742-6915761 Msa0487780:intron 20.0%
!! GTAAAAGAAATGTTAAGAAT+TGG + chr3_4:6915998-6916017 None:intergenic 20.0%
!!! TAACATTTCTTTTACTTGTT+TGG - chr3_4:6916003-6916022 Msa0487780:intron 20.0%
!! AAATTCTAAGCAAAAAGAAA+AGG + chr3_4:6916175-6916194 None:intergenic 20.0%
!! AAATATTTGGTCTCATAAAT+AGG + chr3_4:6916266-6916285 None:intergenic 20.0%
!! TACAAAATATTGTGAAATAG+AGG - chr3_4:6916612-6916631 Msa0487780:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG - chr3_4:6916869-6916888 Msa0487780:intron 20.0%
!! TGATCTATTATTATTGATAC+AGG + chr3_4:6916991-6917010 None:intergenic 20.0%
!! GAGATTATAGCATAATAATA+AGG + chr3_4:6917017-6917036 None:intergenic 20.0%
!! ATGATAATTCTATGGTATTT+GGG + chr3_4:6917039-6917058 None:intergenic 20.0%
!! AAATACCATAGAATTATCAT+CGG - chr3_4:6917039-6917058 Msa0487780:CDS 20.0%
!!! TGGTATATCTTTTAATCTAA+TGG - chr3_4:6918095-6918114 Msa0487780:intron 20.0%
!! TACCAAACAAAAAATAACTT+GGG + chr3_4:6918127-6918146 None:intergenic 20.0%
!! ATACCAAACAAAAAATAACT+TGG + chr3_4:6918128-6918147 None:intergenic 20.0%
!!! AAGTTATTTTTTGTTTGGTA+TGG - chr3_4:6918127-6918146 Msa0487780:intron 20.0%
!!! ATTTTTCAATTAGATCAAAC+AGG - chr3_4:6918558-6918577 Msa0487780:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG - chr3_4:6916869-6916888 Msa0487780:intron 20.0%
!! TGATCTATTATTATTGATAC+AGG + chr3_4:6916991-6917010 None:intergenic 20.0%
!! GAGATTATAGCATAATAATA+AGG + chr3_4:6917017-6917036 None:intergenic 20.0%
!! ATGATAATTCTATGGTATTT+GGG + chr3_4:6917039-6917058 None:intergenic 20.0%
!! AAATACCATAGAATTATCAT+CGG - chr3_4:6917039-6917058 Msa0487780:CDS 20.0%
!! TAAAATAGGTAACATGATTA+TGG - chr3_4:6919829-6919848 Msa0487780:intron 20.0%
!! GCTTATATTACATCATTTAA+AGG - chr3_4:6920570-6920589 Msa0487780:intron 20.0%
!! ATATATACAGAACTTAACAA+AGG + chr3_4:6920659-6920678 None:intergenic 20.0%
!! TTCTGTATATATCAAACATA+GGG - chr3_4:6920667-6920686 Msa0487780:intron 20.0%
!! TGTATAAGTGAATATATACA+CGG + chr3_4:6921198-6921217 None:intergenic 20.0%
!!! AAAAAAGAACTTGATTTGAA+TGG - chr3_4:6921566-6921585 Msa0487780:intron 20.0%
!!! GTTTTTTCTTCTTAAATATG+GGG + chr3_4:6921823-6921842 None:intergenic 20.0%
!!! TTGCTATTTTTTCTTTTAAC+TGG - chr3_4:6922044-6922063 Msa0487780:intron 20.0%
!!! TTTATCTTTTTTTCATGTCA+AGG - chr3_4:6922384-6922403 Msa0487780:intron 20.0%
!!! GTTGATTTTGATGTTTTTAT+TGG + chr3_4:6922545-6922564 None:intergenic 20.0%
!! TTTATAGTATGCTATCATTT+AGG - chr3_4:6922679-6922698 Msa0487780:intron 20.0%
!! TTATAGTATGCTATCATTTA+GGG - chr3_4:6922680-6922699 Msa0487780:intron 20.0%
!!! GTAAACATTTTTAAACATAG+AGG - chr3_4:6922760-6922779 Msa0487780:intron 20.0%
!! AAACAATAAAGGATTACTAT+TGG - chr3_4:6922800-6922819 Msa0487780:intron 20.0%
!! AACAATAAAGGATTACTATT+GGG - chr3_4:6922801-6922820 Msa0487780:intron 20.0%
!! ATCCAATAATATACCAATAA+GGG + chr3_4:6922851-6922870 None:intergenic 20.0%
!! ATATTATTGGATGAACAATA+TGG - chr3_4:6922859-6922878 Msa0487780:intron 20.0%
!!! ATCTTTGTGTATTTTCTTTT+TGG - chr3_4:6923035-6923054 Msa0487780:intron 20.0%
!!! CTTTTCCAATATATTGTTTT+TGG - chr3_4:6923210-6923229 Msa0487780:intron 20.0%
!!! AAGTTCGTTTTTGATAATAT+AGG - chr3_4:6923564-6923583 Msa0487780:intron 20.0%
!!! AGTTCGTTTTTGATAATATA+GGG - chr3_4:6923565-6923584 Msa0487780:intron 20.0%
!!! ATTGTCAATTTTTATTTTCC+GGG - chr3_4:6923730-6923749 Msa0487780:intron 20.0%
!! GAATAAAGTTTGGATAATTT+AGG - chr3_4:6924118-6924137 Msa0487780:intron 20.0%
!!! ATAAGTTTTTGTGTATTTGA+TGG - chr3_4:6924199-6924218 Msa0487780:intron 20.0%
!!! TTATAAAGAACAAAAGTACA+TGG - chr3_4:6924663-6924682 Msa0487780:intron 20.0%
!! TTATGCTTATTTATTCTGTA+AGG - chr3_4:6924779-6924798 Msa0487780:intron 20.0%
!! TATGCTTATTTATTCTGTAA+GGG - chr3_4:6924780-6924799 Msa0487780:intron 20.0%
!!! TACTCAAATATTTTAATGTC+TGG + chr3_4:6925098-6925117 None:intergenic 20.0%
!!! AATTTTGAAAATTAGTAGGA+TGG + chr3_4:6925260-6925279 None:intergenic 20.0%
!! AAAAGATTCATTCATAATCA+AGG - chr3_4:6925572-6925591 Msa0487780:intron 20.0%
!!! ATTTTATTAAGAGAAAAGAG+AGG + chr3_4:6925773-6925792 None:intergenic 20.0%
!!! TTTTTCCTTTAAAAGTAACA+TGG - chr3_4:6925796-6925815 Msa0487780:CDS 20.0%
!!! ATGTTAGCATTTTCATTTTT+GGG + chr3_4:6926091-6926110 None:intergenic 20.0%
!!! AATGTTAGCATTTTCATTTT+TGG + chr3_4:6926092-6926111 None:intergenic 20.0%
!! AAAAATGAAAATGCTAACAT+TGG - chr3_4:6926091-6926110 Msa0487780:CDS 20.0%
!! AAAATGAAAATGCTAACATT+GGG - chr3_4:6926092-6926111 Msa0487780:CDS 20.0%
!! AGTTATTGGTATAAATAAGA+AGG - chr3_4:6926622-6926641 Msa0487780:five_prime_UTR 20.0%
! ATTCCAGCAATATATAATAG+GGG + chr3_4:6915406-6915425 None:intergenic 25.0%
! CATTCCAGCAATATATAATA+GGG + chr3_4:6915407-6915426 None:intergenic 25.0%
! ACATTCCAGCAATATATAAT+AGG + chr3_4:6915408-6915427 None:intergenic 25.0%
! ATTGAGAGAAGTTGAATTAT+TGG + chr3_4:6915581-6915600 None:intergenic 25.0%
! ATATATACACTGACCATATT+TGG + chr3_4:6915732-6915751 None:intergenic 25.0%
! TCATGTACATATTTAGTGTT+TGG - chr3_4:6915816-6915835 Msa0487780:intron 25.0%
! AATAAAACTCTTCCTCAAAT+AGG - chr3_4:6915925-6915944 Msa0487780:intron 25.0%
!! TCTTATCTTTACTTCTTTTC+TGG - chr3_4:6915960-6915979 Msa0487780:intron 25.0%
!!! TTTTGTTTCTTAGCTATCTT+TGG - chr3_4:6916072-6916091 Msa0487780:intron 25.0%
! CAATTATAACAAACACGTAT+AGG + chr3_4:6916117-6916136 None:intergenic 25.0%
! TACCTTATAATTGAAGCAAA+TGG - chr3_4:6916210-6916229 Msa0487780:intron 25.0%
!!! TTTTTTCTGCTACCAAAAAT+AGG + chr3_4:6916376-6916395 None:intergenic 25.0%
!! ATTTTATAACTTATGCCCTT+AGG + chr3_4:6916760-6916779 None:intergenic 25.0%
! GATGATAATTCTATGGTATT+TGG + chr3_4:6917040-6917059 None:intergenic 25.0%
! AAATACCGATGATAATTCTA+TGG + chr3_4:6917047-6917066 None:intergenic 25.0%
!!! AGACTAATTCCTATTTTTGA+TGG - chr3_4:6917181-6917200 Msa0487780:CDS 25.0%
!!! AATTCCTATTTTTGATGGAA+AGG - chr3_4:6917186-6917205 Msa0487780:CDS 25.0%
!!! TATTTTTTGTTTGGTATGGA+AGG - chr3_4:6918131-6918150 Msa0487780:intron 25.0%
! TTCAATTTAATGATAGCCAT+TGG - chr3_4:6918193-6918212 Msa0487780:intron 25.0%
! TCAATTTAATGATAGCCATT+GGG - chr3_4:6918194-6918213 Msa0487780:intron 25.0%
! ACAAAACAATTCTAGTAAGT+GGG - chr3_4:6918329-6918348 Msa0487780:CDS 25.0%
!!! TTTATGCTATTTTTGGAATC+TGG + chr3_4:6918390-6918409 None:intergenic 25.0%
! ATAAAATATAGACAACCCTA+TGG - chr3_4:6918405-6918424 Msa0487780:intron 25.0%
!! AAACCTTTTCAAACAATCAT+CGG - chr3_4:6918452-6918471 Msa0487780:intron 25.0%
! ATAAAGATGCTATTGATGAA+GGG - chr3_4:6918492-6918511 Msa0487780:intron 25.0%
! ATCTCAATATTAAGAGTAGA+TGG + chr3_4:6918759-6918778 None:intergenic 25.0%
! TAATATTGAGATCTCTTCAA+TGG - chr3_4:6918767-6918786 Msa0487780:intron 25.0%
! ATGTGAAATACATTAGTTGT+CGG - chr3_4:6918829-6918848 Msa0487780:intron 25.0%
!! ATTTTATAACTTATGCCCTT+AGG + chr3_4:6916760-6916779 None:intergenic 25.0%
! GATGATAATTCTATGGTATT+TGG + chr3_4:6917040-6917059 None:intergenic 25.0%
! AAATACCGATGATAATTCTA+TGG + chr3_4:6917047-6917066 None:intergenic 25.0%
! TAATAAGTTCGAGAACAATA+TGG + chr3_4:6919677-6919696 None:intergenic 25.0%
!!! GATTATGGTTGTTGTTTTAA+TGG - chr3_4:6919844-6919863 Msa0487780:intron 25.0%
! ATAGTTTGAGCAATATCAAT+GGG + chr3_4:6919879-6919898 None:intergenic 25.0%
! AATAGTTTGAGCAATATCAA+TGG + chr3_4:6919880-6919899 None:intergenic 25.0%
! TTAAAAAGATTGAACAGTCT+GGG - chr3_4:6920033-6920052 Msa0487780:intron 25.0%
! AGGTTGTTGTATTAAATCTT+CGG - chr3_4:6920125-6920144 Msa0487780:intron 25.0%
! AATTTGAGGATTGTTATACA+TGG - chr3_4:6920159-6920178 Msa0487780:intron 25.0%
! ATTGTTATACATGGATAGAA+AGG - chr3_4:6920168-6920187 Msa0487780:intron 25.0%
! GTTCTGTATATATCAAACAT+AGG - chr3_4:6920666-6920685 Msa0487780:intron 25.0%
!! ATGGTAAACACATTTTCTAA+TGG - chr3_4:6921101-6921120 Msa0487780:intron 25.0%
!! ATAGAGAGAATACGTTATTT+TGG - chr3_4:6921127-6921146 Msa0487780:intron 25.0%
! GTATAAGTGAATATATACAC+GGG + chr3_4:6921197-6921216 None:intergenic 25.0%
!! GAATCTCGATTTTTATGTTT+GGG + chr3_4:6921443-6921462 None:intergenic 25.0%
!! AGAATCTCGATTTTTATGTT+TGG + chr3_4:6921444-6921463 None:intergenic 25.0%
!!! AAGTCTTATTCTCACAAAAT+TGG - chr3_4:6921469-6921488 Msa0487780:intron 25.0%
! TATTCTCACAAAATTGGAAT+TGG - chr3_4:6921475-6921494 Msa0487780:intron 25.0%
! AACAAAAATCATCAAAACCA+AGG - chr3_4:6921840-6921859 Msa0487780:intron 25.0%
! TGTCAAGATATTTAATGTCA+AGG + chr3_4:6921911-6921930 None:intergenic 25.0%
! AATAAATGCATTCACTAATG+TGG - chr3_4:6921946-6921965 Msa0487780:intron 25.0%
! ATAAATGCATTCACTAATGT+GGG - chr3_4:6921947-6921966 Msa0487780:intron 25.0%
! TTTCTTATATATAGAACCAG+AGG - chr3_4:6922087-6922106 Msa0487780:intron 25.0%
!!! TGAATTGTTTATTGGTTTTG+TGG - chr3_4:6922168-6922187 Msa0487780:intron 25.0%
!!! TCTAGTTCTTTATTACGATT+AGG - chr3_4:6922310-6922329 Msa0487780:intron 25.0%
!! TCAGTTTATATCTAAGATTG+TGG - chr3_4:6922574-6922593 Msa0487780:intron 25.0%
! TTGACATGGAAAAACAATAA+AGG - chr3_4:6922789-6922808 Msa0487780:intron 25.0%
! TGGGAATTATAATCATATCA+AGG - chr3_4:6922820-6922839 Msa0487780:intron 25.0%
! AACCCTTATTGGTATATTAT+TGG - chr3_4:6922846-6922865 Msa0487780:intron 25.0%
! CATCCAATAATATACCAATA+AGG + chr3_4:6922852-6922871 None:intergenic 25.0%
!!! AAAGGAAATTTTCAAGTCAA+AGG + chr3_4:6923004-6923023 None:intergenic 25.0%
! ACTTGAAAATTTCCTTTGTT+AGG - chr3_4:6923007-6923026 Msa0487780:intron 25.0%
! CTTGAAAATTTCCTTTGTTA+GGG - chr3_4:6923008-6923027 Msa0487780:intron 25.0%
! TTGAAAATTTCCTTTGTTAG+GGG - chr3_4:6923009-6923028 Msa0487780:intron 25.0%
! TTGGCAATGAATAAAACTAT+CGG - chr3_4:6923054-6923073 Msa0487780:intron 25.0%
! TCAAAAGAATTCTAACTACA+TGG - chr3_4:6923109-6923128 Msa0487780:intron 25.0%
! TGGACACAAAATTATACTAT+AGG - chr3_4:6923129-6923148 Msa0487780:intron 25.0%
! AAAAGGCAAAAATACATCAT+GGG + chr3_4:6923156-6923175 None:intergenic 25.0%
! AAAAAGGCAAAAATACATCA+TGG + chr3_4:6923157-6923176 None:intergenic 25.0%
! GATACATTATTTATGCAGAA+TGG - chr3_4:6923513-6923532 Msa0487780:intron 25.0%
!!! TTTTGGCTTTAGTATTTAAC+TGG - chr3_4:6923625-6923644 Msa0487780:intron 25.0%
! TCAATACATAGCAATCAATT+GGG + chr3_4:6923693-6923712 None:intergenic 25.0%
! ATCAATACATAGCAATCAAT+TGG + chr3_4:6923694-6923713 None:intergenic 25.0%
! AAGTAATTAAGTCTACGAAT+TGG - chr3_4:6923790-6923809 Msa0487780:intron 25.0%
! AGTAATTAAGTCTACGAATT+GGG - chr3_4:6923791-6923810 Msa0487780:intron 25.0%
! AATATTGGCAATATCAAAAC+CGG + chr3_4:6923923-6923942 None:intergenic 25.0%
! GAATGCATAAGAATAAAGTT+TGG - chr3_4:6924108-6924127 Msa0487780:intron 25.0%
! ATAATCATATACTAGACTTG+TGG + chr3_4:6924232-6924251 None:intergenic 25.0%
!! GTAAATTCAAAAGAAAGCAT+AGG - chr3_4:6924431-6924450 Msa0487780:intron 25.0%
! AAAATGAGCTTCAAATATGA+AGG + chr3_4:6924561-6924580 None:intergenic 25.0%
! ATTACAAACAAAAGATACAC+TGG - chr3_4:6924711-6924730 Msa0487780:intron 25.0%
!! GGATTTTACACAAATATACT+TGG - chr3_4:6925287-6925306 Msa0487780:intron 25.0%
!!! TGGTTATTTTTATCCTTCTT+AGG - chr3_4:6925821-6925840 Msa0487780:intron 25.0%
!!! TTTATTACTGATTTTGCAGA+TGG - chr3_4:6925939-6925958 Msa0487780:intron 25.0%
!!! TTATTACTGATTTTGCAGAT+GGG - chr3_4:6925940-6925959 Msa0487780:intron 25.0%
! CTTTCACACTTATAATTTCA+TGG + chr3_4:6926122-6926141 None:intergenic 25.0%
! AAAGTAGTTTGATTCAAACT+TGG - chr3_4:6926216-6926235 Msa0487780:CDS 25.0%
! AAAACTGAAACCTTAGTTTA+TGG + chr3_4:6926249-6926268 None:intergenic 25.0%
! ATAAATCAGAGAAAATGAGA+AGG + chr3_4:6926284-6926303 None:intergenic 25.0%
! AAAAATGAATCTTCATCATC+AGG + chr3_4:6926377-6926396 None:intergenic 25.0%
!!! TGATGATGAAGATTCATTTT+TGG - chr3_4:6926376-6926395 Msa0487780:CDS 25.0%
! ATGGTTTAATTTCAGCACTT+TGG + chr3_4:6914998-6915017 None:intergenic 30.0%
TTCAAACAAGAAGAAGAAGA+AGG - chr3_4:6915146-6915165 Msa0487780:three_prime_UTR 30.0%
AAATTTGGACCATGATGATT+TGG + chr3_4:6915329-6915348 None:intergenic 30.0%
TGCTGGAATGTTATTGTATA+TGG - chr3_4:6915417-6915436 Msa0487780:three_prime_UTR 30.0%
GCTGGAATGTTATTGTATAT+GGG - chr3_4:6915418-6915437 Msa0487780:three_prime_UTR 30.0%
CAAAGATTATGAAAGAGTTG+AGG + chr3_4:6915526-6915545 None:intergenic 30.0%
CTCAACTCTTTCATAATCTT+TGG - chr3_4:6915524-6915543 Msa0487780:three_prime_UTR 30.0%
AGTTGAATTATTGGAAGAGA+AGG + chr3_4:6915572-6915591 None:intergenic 30.0%
TGAGATCTAAGTCCATTAAA+TGG - chr3_4:6915767-6915786 Msa0487780:intron 30.0%
AACACAAGAACACCATTTAA+TGG + chr3_4:6915782-6915801 None:intergenic 30.0%
TGATACAGTTAATGAAAGCT+TGG - chr3_4:6915866-6915885 Msa0487780:intron 30.0%
AACGAGAAAAAACCTATTTG+AGG + chr3_4:6915940-6915959 None:intergenic 30.0%
GAAACAAAATAGAGTGAGAA+AGG + chr3_4:6916061-6916080 None:intergenic 30.0%
AAGCAAAAAGAAAAGGAGAA+AGG + chr3_4:6916168-6916187 None:intergenic 30.0%
TTAGAATTTCCCAAGTCAAA+TGG - chr3_4:6916186-6916205 Msa0487780:intron 30.0%
! ATAAGGTAACCATTTGACTT+GGG + chr3_4:6916198-6916217 None:intergenic 30.0%
TATAAGGTAACCATTTGACT+TGG + chr3_4:6916199-6916218 None:intergenic 30.0%
CTTATAATTGAAGCAAATGG+CGG - chr3_4:6916213-6916232 Msa0487780:intron 30.0%
TTATAATTGAAGCAAATGGC+GGG - chr3_4:6916214-6916233 Msa0487780:intron 30.0%
TGAAATGGAATCATCATTCA+CGG + chr3_4:6916343-6916362 None:intergenic 30.0%
ATGTTAAAGAGCTGCTATAT+TGG - chr3_4:6916524-6916543 Msa0487780:intron 30.0%
TGTTAAAGAGCTGCTATATT+GGG - chr3_4:6916525-6916544 Msa0487780:intron 30.0%
AGGCTATTACATGTTGAATA+TGG - chr3_4:6916632-6916651 Msa0487780:intron 30.0%
CTATTACATGTTGAATATGG+TGG - chr3_4:6916635-6916654 Msa0487780:intron 30.0%
ATGTGTCCAATGTTAGATAT+AGG - chr3_4:6916731-6916750 Msa0487780:CDS 30.0%
AAATAAAGATGCAGAGGAAA+AGG - chr3_4:6916875-6916894 Msa0487780:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG - chr3_4:6916876-6916895 Msa0487780:intron 30.0%
TCTTCCTTTCCATCAAAAAT+AGG + chr3_4:6917193-6917212 None:intergenic 30.0%
TTTCTCTGTGATCCAAATAT+TGG + chr3_4:6917257-6917276 None:intergenic 30.0%
ACATGGAAGATATTTGAAAG+AGG - chr3_4:6917364-6917383 Msa0487780:intron 30.0%
AGAAAACTATGAAGAGTCAA+AGG - chr3_4:6917483-6917502 Msa0487780:intron 30.0%
ATGTGCTGAGTATTAATTGT+TGG + chr3_4:6917907-6917926 None:intergenic 30.0%
!!! GACCCAAGTTATTTTTTGTT+TGG - chr3_4:6918122-6918141 Msa0487780:intron 30.0%
!! TATGGAAGGTATTAGAAATG+TGG - chr3_4:6918145-6918164 Msa0487780:intron 30.0%
AGAAAAACAGTGGAACAAAT+TGG - chr3_4:6918262-6918281 Msa0487780:CDS 30.0%
GATCTAACAATAAACCTAGT+GGG - chr3_4:6918300-6918319 Msa0487780:CDS 30.0%
CACAAAACAATTCTAGTAAG+TGG - chr3_4:6918328-6918347 Msa0487780:CDS 30.0%
ACCTCTAAATTACAACCATA+GGG + chr3_4:6918423-6918442 None:intergenic 30.0%
AACCTCTAAATTACAACCAT+AGG + chr3_4:6918424-6918443 None:intergenic 30.0%
AATAGCATCTTTATGACTGA+AGG + chr3_4:6918486-6918505 None:intergenic 30.0%
CATAAAGATGCTATTGATGA+AGG - chr3_4:6918491-6918510 Msa0487780:intron 30.0%
TAAAGATGCTATTGATGAAG+GGG - chr3_4:6918493-6918512 Msa0487780:intron 30.0%
ACTTATCAGCAATCAGATAT+AGG + chr3_4:6918611-6918630 None:intergenic 30.0%
GATAAGTTTATCCAAGTGAA+AGG - chr3_4:6918624-6918643 Msa0487780:intron 30.0%
AGTTACTAAGTACAACAAAG+TGG - chr3_4:6918653-6918672 Msa0487780:intron 30.0%
! TAATTCTTTTTATGAGCAGG+AGG - chr3_4:6918703-6918722 Msa0487780:intron 30.0%
!! GCTTTGATTGATGATGTATT+AGG - chr3_4:6918798-6918817 Msa0487780:intron 30.0%
TAATGTATTTCACATGCCAA+GGG + chr3_4:6918824-6918843 None:intergenic 30.0%
!! TTTTGGGGAATTCATTTATC+AGG - chr3_4:6918983-6919002 Msa0487780:intron 30.0%
ATTGTTCATGTTCAATTGCT+TGG - chr3_4:6919079-6919098 Msa0487780:intron 30.0%
TTGTTCATGTTCAATTGCTT+GGG - chr3_4:6919080-6919099 Msa0487780:intron 30.0%
AAATAAAGATGCAGAGGAAA+AGG - chr3_4:6916875-6916894 Msa0487780:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG - chr3_4:6916876-6916895 Msa0487780:intron 30.0%
GTTATGCTTAGTCGTAAAAT+AGG - chr3_4:6919815-6919834 Msa0487780:intron 30.0%
CTTAAAAAGATTGAACAGTC+TGG - chr3_4:6920032-6920051 Msa0487780:intron 30.0%
TAAAAAGATTGAACAGTCTG+GGG - chr3_4:6920034-6920053 Msa0487780:intron 30.0%
GGTTGTTGTATTAAATCTTC+GGG - chr3_4:6920126-6920145 Msa0487780:intron 30.0%
!! TAATACCATGCATTTTAGTG+AGG - chr3_4:6920204-6920223 Msa0487780:intron 30.0%
!! AATACCATGCATTTTAGTGA+GGG - chr3_4:6920205-6920224 Msa0487780:intron 30.0%
!! TACTGCATCTATTTGAGTTT+TGG - chr3_4:6920383-6920402 Msa0487780:intron 30.0%
AATTTCTTCATACAGTCACT+TGG - chr3_4:6920771-6920790 Msa0487780:CDS 30.0%
ATTTCTTCATACAGTCACTT+GGG - chr3_4:6920772-6920791 Msa0487780:CDS 30.0%
TCAATCTTAGAGTAAAAGCT+TGG - chr3_4:6920868-6920887 Msa0487780:CDS 30.0%
GCTGAAGATGTAAAATTGTA+TGG - chr3_4:6921082-6921101 Msa0487780:intron 30.0%
!! CATGATTTGCATCACATTTT+TGG - chr3_4:6921159-6921178 Msa0487780:intron 30.0%
ATTGTCAAATTTGTCTCTAG+TGG + chr3_4:6921286-6921305 None:intergenic 30.0%
CACAAAATTGGAATTGGAAT+TGG - chr3_4:6921481-6921500 Msa0487780:intron 30.0%
!!! TTACGGGTAACTTTTAGAAT+TGG + chr3_4:6921536-6921555 None:intergenic 30.0%
!!! TTTTTTAATGCGTACGTTAC+GGG + chr3_4:6921552-6921571 None:intergenic 30.0%
!!! CTTTTTTAATGCGTACGTTA+CGG + chr3_4:6921553-6921572 None:intergenic 30.0%
! GTTAAAGAAAACTCGACTTT+TGG - chr3_4:6921596-6921615 Msa0487780:intron 30.0%
GTTGTGTGTTAAGTTAAAGT+TGG - chr3_4:6921725-6921744 Msa0487780:intron 30.0%
TGTTAAGTTAAAGTTGGCAT+TGG - chr3_4:6921731-6921750 Msa0487780:intron 30.0%
AAATGTTCCAATGTGAAAAG+TGG - chr3_4:6921765-6921784 Msa0487780:intron 30.0%
AAAAATCATCAAAACCAAGG+AGG - chr3_4:6921843-6921862 Msa0487780:intron 30.0%
CATTTATTTCCCACATTAGT+GGG + chr3_4:6921934-6921953 None:intergenic 30.0%
ACGAGTCATGAATTGTTTAT+TGG - chr3_4:6922160-6922179 Msa0487780:intron 30.0%
!! ATTACACAAGGTGTCTTTTA+TGG - chr3_4:6922337-6922356 Msa0487780:intron 30.0%
! GTCGGCATTTTTAAACATAA+AGG + chr3_4:6922414-6922433 None:intergenic 30.0%
AAAGTTTGGTACAACATTGT+CGG + chr3_4:6922432-6922451 None:intergenic 30.0%
!! TAGATGCAATTTTGATGAAC+TGG + chr3_4:6922489-6922508 None:intergenic 30.0%
! CATAGAGGATTAATTTGACA+TGG - chr3_4:6922775-6922794 Msa0487780:intron 30.0%
TATCAAGGAAAAACCCTTAT+TGG - chr3_4:6922835-6922854 Msa0487780:intron 30.0%
CAATATGGATGAGGATAATT+AGG - chr3_4:6922874-6922893 Msa0487780:intron 30.0%
CTAACTAACTAACAACCAAA+TGG + chr3_4:6922923-6922942 None:intergenic 30.0%
TTGGTTGTTAGTTAGTTAGT+TGG - chr3_4:6922924-6922943 Msa0487780:intron 30.0%
TAGTTGGAGGTCTATATATA+AGG - chr3_4:6922940-6922959 Msa0487780:intron 30.0%
!! AGATACCTCTAAGATAGAAA+GGG + chr3_4:6922969-6922988 None:intergenic 30.0%
!! AAGATACCTCTAAGATAGAA+AGG + chr3_4:6922970-6922989 None:intergenic 30.0%
TGAAATAACTCAAGCAGAAA+GGG + chr3_4:6923092-6923111 None:intergenic 30.0%
TTGAAATAACTCAAGCAGAA+AGG + chr3_4:6923093-6923112 None:intergenic 30.0%
AGGAGCCAAAAACAATATAT+TGG + chr3_4:6923218-6923237 None:intergenic 30.0%
!! TTTATTTTCCGGGTATGTTT+TGG - chr3_4:6923740-6923759 Msa0487780:intron 30.0%
TATCAATTGATGTAGAACCA+AGG + chr3_4:6923768-6923787 None:intergenic 30.0%
AAGCACTTCAATTTCAGAAT+GGG - chr3_4:6923815-6923834 Msa0487780:intron 30.0%
TGGTAGCAAAGCATATATTA+AGG - chr3_4:6923952-6923971 Msa0487780:intron 30.0%
GGTAGCAAAGCATATATTAA+GGG - chr3_4:6923953-6923972 Msa0487780:intron 30.0%
ACAAATACAATACCAATCTC+AGG - chr3_4:6923978-6923997 Msa0487780:intron 30.0%
! TTTTCATGTTGTGAGTATGA+CGG - chr3_4:6924355-6924374 Msa0487780:intron 30.0%
!!! TTTTTTTCCCTTCCTTTCTT+AGG - chr3_4:6924525-6924544 Msa0487780:intron 30.0%
!! GTATCTTTTGTTTGTAATCG+TGG + chr3_4:6924709-6924728 None:intergenic 30.0%
! GAAGTATTTGTTACAACTCA+AGG - chr3_4:6924899-6924918 Msa0487780:intron 30.0%
! AAATTTTCCTCACTTCTTGA+TGG - chr3_4:6924925-6924944 Msa0487780:intron 30.0%
! AATTTTCCTCACTTCTTGAT+GGG - chr3_4:6924926-6924945 Msa0487780:intron 30.0%
TATTCGATAACCCTAACATA+AGG - chr3_4:6925017-6925036 Msa0487780:intron 30.0%
AAATATACTTGGTATGTGCT+AGG - chr3_4:6925298-6925317 Msa0487780:intron 30.0%
TTGCTATCTCATTTATGGAA+AGG - chr3_4:6925380-6925399 Msa0487780:intron 30.0%
CTCATTTATGGAAAGGATTT+AGG - chr3_4:6925387-6925406 Msa0487780:intron 30.0%
TAAAACAAGGACTGTATACA+AGG + chr3_4:6925442-6925461 None:intergenic 30.0%
!!! TGTATACAGTCCTTGTTTTA+CGG - chr3_4:6925442-6925461 Msa0487780:CDS 30.0%
!! TTTTGGTGCAACTAAACAAA+TGG - chr3_4:6925684-6925703 Msa0487780:intron 30.0%
AAAGAGAGGATGTACAATTA+GGG + chr3_4:6925759-6925778 None:intergenic 30.0%
AAAAGAGAGGATGTACAATT+AGG + chr3_4:6925760-6925779 None:intergenic 30.0%
!!! CCATACCATGTTACTTTTAA+AGG + chr3_4:6925804-6925823 None:intergenic 30.0%
! CCTTTAAAAGTAACATGGTA+TGG - chr3_4:6925801-6925820 Msa0487780:intron 30.0%
AGTGTGAAAGAATTGTCTTT+AGG - chr3_4:6926132-6926151 Msa0487780:CDS 30.0%
!! TGATGAAGATTCATTTTTGG+AGG - chr3_4:6926379-6926398 Msa0487780:CDS 30.0%
GAATTGAATGTATGTGTGTG+TGG + chr3_4:6915065-6915084 None:intergenic 35.0%
AAACAGATAGATAGATCCGA+TGG + chr3_4:6915222-6915241 None:intergenic 35.0%
ATCGGATCTATCTATCTGTT+TGG - chr3_4:6915221-6915240 Msa0487780:three_prime_UTR 35.0%
!! TCAGCTATTTTCAGAAGAAG+AGG - chr3_4:6915364-6915383 Msa0487780:three_prime_UTR 35.0%
!! CAGCTATTTTCAGAAGAAGA+GGG - chr3_4:6915365-6915384 Msa0487780:three_prime_UTR 35.0%
TGAATTATTGGAAGAGAAGG+AGG + chr3_4:6915569-6915588 None:intergenic 35.0%
!!! GGAAGAGTTTTATTAGCACA+TGG + chr3_4:6915919-6915938 None:intergenic 35.0%
ACAAAATAGAGTGAGAAAGG+TGG + chr3_4:6916058-6916077 None:intergenic 35.0%
CGCCATTTGCTTCAATTATA+AGG + chr3_4:6916215-6916234 None:intergenic 35.0%
GAAATGGAATCATCATTCAC+GGG + chr3_4:6916342-6916361 None:intergenic 35.0%
ATAGGACTGGAGATATGAAA+TGG + chr3_4:6916358-6916377 None:intergenic 35.0%
! CATATCTCCAGTCCTATTTT+TGG - chr3_4:6916361-6916380 Msa0487780:intron 35.0%
!! AATCTCTAGAATCATCATCC+AGG - chr3_4:6916500-6916519 Msa0487780:intron 35.0%
!! ATCTCTAGAATCATCATCCA+GGG - chr3_4:6916501-6916520 Msa0487780:intron 35.0%
GTTAAAGAGCTGCTATATTG+GGG - chr3_4:6916526-6916545 Msa0487780:intron 35.0%
TACATGTTGAATATGGTGGT+AGG - chr3_4:6916639-6916658 Msa0487780:intron 35.0%
! ATCTGTTTTGCTTTCCACAT+TGG - chr3_4:6916705-6916724 Msa0487780:CDS 35.0%
AGGAGTCCTATATCTAACAT+TGG + chr3_4:6916740-6916759 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG - chr3_4:6916741-6916760 Msa0487780:CDS 35.0%
GTTAGATATAGGACTCCTAA+GGG - chr3_4:6916742-6916761 Msa0487780:CDS 35.0%
! GGATTGGGTATTTTGTATGT+GGG - chr3_4:6916902-6916921 Msa0487780:intron 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG - chr3_4:6916911-6916930 Msa0487780:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG - chr3_4:6916912-6916931 Msa0487780:intron 35.0%
! ATTAGTCTCTCCAACATCAT+TGG + chr3_4:6917169-6917188 None:intergenic 35.0%
!!! CTTCAAAGTACCGTTTTAAC+TGG + chr3_4:6917234-6917253 None:intergenic 35.0%
!! GGTACTTTGAAGCCAATATT+TGG - chr3_4:6917242-6917261 Msa0487780:CDS 35.0%
TTGGATCACAGAGAAAATGA+AGG - chr3_4:6917261-6917280 Msa0487780:CDS 35.0%
AAACTATGAAGAGTCAAAGG+AGG - chr3_4:6917486-6917505 Msa0487780:intron 35.0%
! TGTACCATGCATTTTGTGAA+TGG + chr3_4:6917601-6917620 None:intergenic 35.0%
GATAACAGGGTCAATTGTTA+AGG - chr3_4:6918071-6918090 Msa0487780:intron 35.0%
! AAGGTATTAGAAATGTGGAC+AGG - chr3_4:6918150-6918169 Msa0487780:intron 35.0%
AGGAATAGAGTTACTAGGTT+CGG - chr3_4:6918170-6918189 Msa0487780:intron 35.0%
TAGCCATTGGGTTATGAAAA+AGG - chr3_4:6918206-6918225 Msa0487780:intron 35.0%
AGCCATTGGGTTATGAAAAA+GGG - chr3_4:6918207-6918226 Msa0487780:intron 35.0%
AACCAGAATGAGAAAAACAG+TGG - chr3_4:6918252-6918271 Msa0487780:CDS 35.0%
!! TTCCACTGTTTTTCTCATTC+TGG + chr3_4:6918257-6918276 None:intergenic 35.0%
! AAATTGGTCAGGTTGTATGT+TGG - chr3_4:6918278-6918297 Msa0487780:CDS 35.0%
GGATCTAACAATAAACCTAG+TGG - chr3_4:6918299-6918318 Msa0487780:CDS 35.0%
AGTGGGTGAGAGAAATTAAA+AGG - chr3_4:6918346-6918365 Msa0487780:CDS 35.0%
ACCCTATGGTTGTAATTTAG+AGG - chr3_4:6918419-6918438 Msa0487780:intron 35.0%
TCACCGATGATTGTTTGAAA+AGG + chr3_4:6918458-6918477 None:intergenic 35.0%
TTTATCCAAGTGAAAGGTGA+AGG - chr3_4:6918630-6918649 Msa0487780:intron 35.0%
! GCGTAATTCTTTTTATGAGC+AGG - chr3_4:6918700-6918719 Msa0487780:intron 35.0%
TATTGAGATCTCTTCAATGG+TGG - chr3_4:6918770-6918789 Msa0487780:intron 35.0%
CTAATGTATTTCACATGCCA+AGG + chr3_4:6918825-6918844 None:intergenic 35.0%
AATTCCACTCCCATTGTAAT+TGG + chr3_4:6918862-6918881 None:intergenic 35.0%
ATGACTCGATCACTTGAAAT+GGG - chr3_4:6918888-6918907 Msa0487780:intron 35.0%
! TACAGCACAATGAGAGTTTT+TGG - chr3_4:6918966-6918985 Msa0487780:intron 35.0%
! ACAGCACAATGAGAGTTTTT+GGG - chr3_4:6918967-6918986 Msa0487780:intron 35.0%
TTATGTTATCCTTCACCTTG+AGG - chr3_4:6919263-6919282 Msa0487780:intron 35.0%
TGTTAGATATAGGACTCCTA+AGG - chr3_4:6916741-6916760 Msa0487780:CDS 35.0%
GTTAGATATAGGACTCCTAA+GGG - chr3_4:6916742-6916761 Msa0487780:CDS 35.0%
! GGATTGGGTATTTTGTATGT+GGG - chr3_4:6916902-6916921 Msa0487780:intron 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG - chr3_4:6916911-6916930 Msa0487780:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG - chr3_4:6916912-6916931 Msa0487780:intron 35.0%
TCTCAACCATATCATTCACA+TGG - chr3_4:6919909-6919928 Msa0487780:intron 35.0%
CTCAACCATATCATTCACAT+GGG - chr3_4:6919910-6919929 Msa0487780:intron 35.0%
AAACACCCATGTGAATGATA+TGG + chr3_4:6919918-6919937 None:intergenic 35.0%
TTCATCATTCTACTTCCATG+AGG - chr3_4:6919960-6919979 Msa0487780:intron 35.0%
!! TTAGCCTTTTACAACAAGTG+GGG + chr3_4:6920106-6920125 None:intergenic 35.0%
!! CTTAGCCTTTTACAACAAGT+GGG + chr3_4:6920107-6920126 None:intergenic 35.0%
! TTTTCCCTCACTAAAATGCA+TGG + chr3_4:6920212-6920231 None:intergenic 35.0%
TTAGTGAGGGAAAATAAGTG+AGG - chr3_4:6920218-6920237 Msa0487780:intron 35.0%
CATATCTAGCACTATTCACT+TGG - chr3_4:6920422-6920441 Msa0487780:intron 35.0%
TGTTGTGGCAACTAATGTAA+TGG + chr3_4:6920547-6920566 None:intergenic 35.0%
TACATTAGTTGCCACAACAT+CGG - chr3_4:6920548-6920567 Msa0487780:intron 35.0%
TGTAATATAAGCCGATGTTG+TGG + chr3_4:6920562-6920581 None:intergenic 35.0%
TGTCTCGATTAAGCACAAAA+AGG + chr3_4:6920624-6920643 None:intergenic 35.0%
AACTGTTGAAGTATGTCATC+TGG + chr3_4:6920825-6920844 None:intergenic 35.0%
ATAAACAGGAGAAGAGAGAA+AGG + chr3_4:6920954-6920973 None:intergenic 35.0%
TAATTTCAAGCCAGAAGAAC+TGG + chr3_4:6920991-6921010 None:intergenic 35.0%
CTAAAAACAGGTAGACTGAT+GGG - chr3_4:6921693-6921712 Msa0487780:intron 35.0%
!! TGCATTTCCACTTTTCACAT+TGG + chr3_4:6921775-6921794 None:intergenic 35.0%
AATCATTAAATGAGCCTCCT+TGG + chr3_4:6921860-6921879 None:intergenic 35.0%
GCATTTATTTCCCACATTAG+TGG + chr3_4:6921935-6921954 None:intergenic 35.0%
GGAAAAACGAAAGCTTGTAT+AGG - chr3_4:6922108-6922127 Msa0487780:intron 35.0%
GAACTAGAACAGATTCAACA+GGG + chr3_4:6922298-6922317 None:intergenic 35.0%
AGAACTAGAACAGATTCAAC+AGG + chr3_4:6922299-6922318 None:intergenic 35.0%
CGATTAGGCAAAATTACACA+AGG - chr3_4:6922325-6922344 Msa0487780:intron 35.0%
! GATGAACTGGTTAAGACTTT+TGG + chr3_4:6922476-6922495 None:intergenic 35.0%
TTGGATGAACAATATGGATG+AGG - chr3_4:6922865-6922884 Msa0487780:intron 35.0%
TAGTTGTTATCCTTGCCATT+TGG - chr3_4:6922905-6922924 Msa0487780:intron 35.0%
TAACTAACAACCAAATGGCA+AGG + chr3_4:6922918-6922937 None:intergenic 35.0%
GTTGTTAGTTAGTTAGTTGG+AGG - chr3_4:6922927-6922946 Msa0487780:intron 35.0%
! TACTGATTGAGCTAATCTGT+TGG + chr3_4:6923292-6923311 None:intergenic 35.0%
AAATCTAAGAGCTCCAAAGT+TGG + chr3_4:6923346-6923365 None:intergenic 35.0%
AACATATTTCCCACCACTTT+GGG + chr3_4:6923427-6923446 None:intergenic 35.0%
AAACATATTTCCCACCACTT+TGG + chr3_4:6923428-6923447 None:intergenic 35.0%
CAAGCACTTCAATTTCAGAA+TGG - chr3_4:6923814-6923833 Msa0487780:intron 35.0%
AGCACTTCAATTTCAGAATG+GGG - chr3_4:6923816-6923835 Msa0487780:intron 35.0%
CATGAATTCAGACAAAAGAC+CGG - chr3_4:6923901-6923920 Msa0487780:intron 35.0%
! TAAATGCTTGTTGAACCTCT+TGG - chr3_4:6924025-6924044 Msa0487780:intron 35.0%
ACATCTTGTACTATTCCAAG+AGG + chr3_4:6924043-6924062 None:intergenic 35.0%
!!! ACAGTTTTTTCTGTGCATGA+AGG - chr3_4:6924321-6924340 Msa0487780:intron 35.0%
! TTTTCTGTGCATGAAGGATA+TGG - chr3_4:6924327-6924346 Msa0487780:intron 35.0%
AAGCATAGGATAATAAAGCC+TGG - chr3_4:6924445-6924464 Msa0487780:intron 35.0%
AATTAAGTGCATACCTCCAA+CGG + chr3_4:6924505-6924524 None:intergenic 35.0%
TAGGAATCCTAAGAAAGGAA+GGG + chr3_4:6924535-6924554 None:intergenic 35.0%
ATAGGAATCCTAAGAAAGGA+AGG + chr3_4:6924536-6924555 None:intergenic 35.0%
GCTTCAAATATGAAGGAGAT+AGG + chr3_4:6924554-6924573 None:intergenic 35.0%
!! CTCATTTTATTTGATGCTGC+AGG - chr3_4:6924573-6924592 Msa0487780:intron 35.0%
!! TTTTATTTGATGCTGCAGGT+AGG - chr3_4:6924577-6924596 Msa0487780:intron 35.0%
TTTATTTGATGCTGCAGGTA+GGG - chr3_4:6924578-6924597 Msa0487780:intron 35.0%
TTAAATTGAGCAAGCTCTTC+TGG + chr3_4:6924742-6924761 None:intergenic 35.0%
! AGAAGAGCTTGCTCAATTTA+AGG - chr3_4:6924741-6924760 Msa0487780:intron 35.0%
TTATTCTGTAAGGGAATTCC+AGG - chr3_4:6924789-6924808 Msa0487780:intron 35.0%
! GTATTTGTTACAACTCAAGG+TGG - chr3_4:6924902-6924921 Msa0487780:intron 35.0%
ACAGGAGATATATGTATGGT+GGG - chr3_4:6924951-6924970 Msa0487780:intron 35.0%
! AGAGCCAATCTTCTTTTATC+AGG + chr3_4:6924995-6925014 None:intergenic 35.0%
CAAAGCTGTACCTTATGTTA+GGG + chr3_4:6925030-6925049 None:intergenic 35.0%
TCAAAGCTGTACCTTATGTT+AGG + chr3_4:6925031-6925050 None:intergenic 35.0%
! ACAGCTTTGACTATCTTTAG+TGG - chr3_4:6925041-6925060 Msa0487780:intron 35.0%
ATGACGACGTTTGATCATTA+TGG - chr3_4:6925119-6925138 Msa0487780:intron 35.0%
TGTTGTTGTATGACGAACAA+TGG - chr3_4:6925200-6925219 Msa0487780:intron 35.0%
GTTGTTGTATGACGAACAAT+GGG - chr3_4:6925201-6925220 Msa0487780:intron 35.0%
!! CAACTTTATTGATTCGTCCA+GGG + chr3_4:6925505-6925524 None:intergenic 35.0%
ATGTACAATTAGGGAGATCA+GGG + chr3_4:6925750-6925769 None:intergenic 35.0%
TGTGATAAGCGAATAAACGA+AGG + chr3_4:6925857-6925876 None:intergenic 35.0%
!!! TTCACTAGCCTTTTTTACCT+CGG + chr3_4:6926020-6926039 None:intergenic 35.0%
! TGGCATGGGAAAAGTATATA+GGG + chr3_4:6926044-6926063 None:intergenic 35.0%
TGGAGAAAAGCCATAAACTA+AGG - chr3_4:6926236-6926255 Msa0487780:CDS 35.0%
AATGAATCTTCATCATCAGG+TGG + chr3_4:6926374-6926393 None:intergenic 35.0%
!! AAGATTCATTTTTGGAGGAC+TGG - chr3_4:6926384-6926403 Msa0487780:CDS 35.0%
! CATTGGTTAAATGAACTGCT+TGG + chr3_4:6926439-6926458 None:intergenic 35.0%
CAAGTCTGAACACAACTCAA+GGG + chr3_4:6915026-6915045 None:intergenic 40.0%
ACAAGTCTGAACACAACTCA+AGG + chr3_4:6915027-6915046 None:intergenic 40.0%
AGACACTCACTTATTGCCAT+CGG - chr3_4:6915203-6915222 Msa0487780:three_prime_UTR 40.0%
TCTGTTTGGATCCAAATGCA+TGG - chr3_4:6915235-6915254 Msa0487780:three_prime_UTR 40.0%
CTGTTTGGATCCAAATGCAT+GGG - chr3_4:6915236-6915255 Msa0487780:three_prime_UTR 40.0%
! CCATGATGATTTGGAAGAAG+AGG + chr3_4:6915320-6915339 None:intergenic 40.0%
CCTCTTCTTCCAAATCATCA+TGG - chr3_4:6915317-6915336 Msa0487780:three_prime_UTR 40.0%
GCACCCCTATTATATATTGC+TGG - chr3_4:6915400-6915419 Msa0487780:three_prime_UTR 40.0%
CTTCTATAAAGAGAACCAGG+AGG + chr3_4:6915502-6915521 None:intergenic 40.0%
GGACTTCTATAAAGAGAACC+AGG + chr3_4:6915505-6915524 None:intergenic 40.0%
GAGGAGTCATTTAGCATGAA+AGG + chr3_4:6915550-6915569 None:intergenic 40.0%
AGTGTTTGGCTGAAAACATG+TGG - chr3_4:6915830-6915849 Msa0487780:intron 40.0%
GTGTGAAAGAGGATAGACAA+TGG - chr3_4:6915890-6915909 Msa0487780:intron 40.0%
TCTGCTACCAAAAATAGGAC+TGG + chr3_4:6916371-6916390 None:intergenic 40.0%
TAGCATTCAACATGTATGCC+TGG + chr3_4:6916668-6916687 None:intergenic 40.0%
ATTGGACACATGATCCAATG+TGG + chr3_4:6916722-6916741 None:intergenic 40.0%
! GGGATTGGGTATTTTGTATG+TGG - chr3_4:6916901-6916920 Msa0487780:intron 40.0%
! TGGGTATTTTGTATGTGGGT+TGG - chr3_4:6916906-6916925 Msa0487780:intron 40.0%
ACAGGAAAGTAACTGCAGAA+AGG + chr3_4:6916973-6916992 None:intergenic 40.0%
TCTGAACCAGTATCTAACAC+TGG - chr3_4:6917074-6917093 Msa0487780:CDS 40.0%
CTGATACCAGTGTTAGATAC+TGG + chr3_4:6917083-6917102 None:intergenic 40.0%
ATGGAAAGGAAGATGCGTAT+TGG - chr3_4:6917200-6917219 Msa0487780:CDS 40.0%
GGTGGTTGATCCAGTTAAAA+CGG - chr3_4:6917221-6917240 Msa0487780:CDS 40.0%
AGAGAAAATGAAGGTCGACT+GGG - chr3_4:6917270-6917289 Msa0487780:CDS 40.0%
GTTACTCTGTATGCTTTCAG+AGG - chr3_4:6917292-6917311 Msa0487780:CDS 40.0%
!! CTTCCAATTGGTGGTCTTAT+TGG - chr3_4:6917320-6917339 Msa0487780:CDS 40.0%
CTTCCAATAAGACCACCAAT+TGG + chr3_4:6917326-6917345 None:intergenic 40.0%
!! TGGTGGTCTTATTGGAAGAA+TGG - chr3_4:6917328-6917347 Msa0487780:intron 40.0%
AGAAATTCATCCCAGACCTA+TGG - chr3_4:6917395-6917414 Msa0487780:intron 40.0%
GAAATTCATCCCAGACCTAT+GGG - chr3_4:6917396-6917415 Msa0487780:intron 40.0%
TCTCATTCAGAACGTACTCA+TGG + chr3_4:6917459-6917478 None:intergenic 40.0%
TATGAAGAGTCAAAGGAGGT+TGG - chr3_4:6917490-6917509 Msa0487780:intron 40.0%
GACACCATTCACAAAATGCA+TGG - chr3_4:6917594-6917613 Msa0487780:intron 40.0%
TGCATGGTACAAAAATCTGC+AGG - chr3_4:6917610-6917629 Msa0487780:intron 40.0%
ATCTGCAGGTCACAATGAAT+CGG - chr3_4:6917624-6917643 Msa0487780:intron 40.0%
TGTGAGGTCAAAAGGATAAC+AGG - chr3_4:6918057-6918076 Msa0487780:intron 40.0%
GTGAGGTCAAAAGGATAACA+GGG - chr3_4:6918058-6918077 Msa0487780:intron 40.0%
ACAGGGTCAATTGTTAAGGT+TGG - chr3_4:6918075-6918094 Msa0487780:intron 40.0%
TGGACAGGAATAGAGTTACT+AGG - chr3_4:6918165-6918184 Msa0487780:intron 40.0%
GCCATTGGGTTATGAAAAAG+GGG - chr3_4:6918208-6918227 Msa0487780:intron 40.0%
CCATTGGGTTATGAAAAAGG+GGG - chr3_4:6918209-6918228 Msa0487780:intron 40.0%
AACAGTGGAACAAATTGGTC+AGG - chr3_4:6918267-6918286 Msa0487780:CDS 40.0%
! AACAATAAACCTAGTGGGTC+AGG - chr3_4:6918305-6918324 Msa0487780:CDS 40.0%
GGGTGAGAGAAATTAAAAGG+TGG - chr3_4:6918349-6918368 Msa0487780:CDS 40.0%
ATTGATGAAGGGGCTCTTAA+AGG - chr3_4:6918503-6918522 Msa0487780:intron 40.0%
CAAACAGGAATTCCATCTCA+AGG - chr3_4:6918573-6918592 Msa0487780:intron 40.0%
GAATTCCATCTCAAGGTCAT+TGG - chr3_4:6918580-6918599 Msa0487780:intron 40.0%
TAACTCCTTCACCTTTCACT+TGG + chr3_4:6918638-6918657 None:intergenic 40.0%
! TTTTATGAGCAGGAGGAACA+TGG - chr3_4:6918710-6918729 Msa0487780:intron 40.0%
!! TTGATGATGTATTAGGCCCT+TGG - chr3_4:6918805-6918824 Msa0487780:intron 40.0%
GGTTGCCAACCAATTACAAT+GGG - chr3_4:6918850-6918869 Msa0487780:intron 40.0%
GATGACTCGATCACTTGAAA+TGG - chr3_4:6918887-6918906 Msa0487780:intron 40.0%
! CAGCACAATGAGAGTTTTTG+GGG - chr3_4:6918968-6918987 Msa0487780:intron 40.0%
TGTTGCTACAGCACAAAGTA+AGG + chr3_4:6919045-6919064 None:intergenic 40.0%
TCAAGGCTACTCTAGTAGTT+AGG - chr3_4:6919123-6919142 Msa0487780:intron 40.0%
! TGTCGCTCTACTTCAAGTTA+TGG - chr3_4:6919225-6919244 Msa0487780:intron 40.0%
! GTCGCTCTACTTCAAGTTAT+GGG - chr3_4:6919226-6919245 Msa0487780:intron 40.0%
GATAACATAAGTGTCCACCA+GGG + chr3_4:6919253-6919272 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG + chr3_4:6919281-6919300 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG - chr3_4:6919281-6919300 Msa0487780:intron 40.0%
GAGGACAAGGTGAATCTTTA+GGG - chr3_4:6919282-6919301 Msa0487780:intron 40.0%
AGGACAAGGTGAATCTTTAG+GGG - chr3_4:6919283-6919302 Msa0487780:intron 40.0%
!! GGGGGAGTATTGTTAGATAT+AGG - chr3_4:6919303-6919322 Msa0487780:intron 40.0%
! GGGATTGGGTATTTTGTATG+TGG - chr3_4:6916901-6916920 Msa0487780:intron 40.0%
! TGGGTATTTTGTATGTGGGT+TGG - chr3_4:6916906-6916925 Msa0487780:intron 40.0%
ACAGGAAAGTAACTGCAGAA+AGG + chr3_4:6916973-6916992 None:intergenic 40.0%
GACAGTTGGATGTTAGATAC+TGG + chr3_4:6919655-6919674 None:intergenic 40.0%
TCGAGAACAATATGGACAGT+TGG + chr3_4:6919669-6919688 None:intergenic 40.0%
ATAGTGTATGGAGAGACTCA+AGG - chr3_4:6919781-6919800 Msa0487780:intron 40.0%
TTATGGGTCATATGCAAGAC+AGG - chr3_4:6919993-6920012 Msa0487780:intron 40.0%
ATATGCAAGACAGGTCTGAT+AGG - chr3_4:6920002-6920021 Msa0487780:intron 40.0%
!! CCTTAGCCTTTTACAACAAG+TGG + chr3_4:6920108-6920127 None:intergenic 40.0%
!! CCACTTGTTGTAAAAGGCTA+AGG - chr3_4:6920105-6920124 Msa0487780:intron 40.0%
CAATCGAATATCCTGAACGT+CGG - chr3_4:6920455-6920474 Msa0487780:intron 40.0%
CATCGAAAATGTCACCGAAA+TGG + chr3_4:6920749-6920768 None:intergenic 40.0%
TCCAGCTCACTATCTTAAGA+AGG - chr3_4:6920896-6920915 Msa0487780:CDS 40.0%
ACCTTCTTAAGATAGTGAGC+TGG + chr3_4:6920900-6920919 None:intergenic 40.0%
!! TTCCTCAGCTTTTGGAAATG+AGG - chr3_4:6920922-6920941 Msa0487780:CDS 40.0%
TTCTCCTGTTTATTCCTCAC+TGG - chr3_4:6920961-6920980 Msa0487780:intron 40.0%
AAGACCAGTGAGGAATAAAC+AGG + chr3_4:6920968-6920987 None:intergenic 40.0%
! GAACTTGATTTGAATGGCTG+TGG - chr3_4:6921572-6921591 Msa0487780:intron 40.0%
! CGACTTTTGGCAGAATGTAA+TGG - chr3_4:6921609-6921628 Msa0487780:intron 40.0%
! TTGCTGTTGCAGCTAAAAAC+AGG - chr3_4:6921681-6921700 Msa0487780:intron 40.0%
GCTAAAAACAGGTAGACTGA+TGG - chr3_4:6921692-6921711 Msa0487780:intron 40.0%
CAGATGTTATACACTTGCTC+TGG - chr3_4:6921797-6921816 Msa0487780:intron 40.0%
TATCTTGACACCCACTAATG+TGG - chr3_4:6921921-6921940 Msa0487780:intron 40.0%
ATCTTGACACCCACTAATGT+GGG - chr3_4:6921922-6921941 Msa0487780:intron 40.0%
!! ACAAGCTTTCGTTTTTCCTC+TGG + chr3_4:6922106-6922125 None:intergenic 40.0%
TGCCTACAACTATAATGCCA+GGG + chr3_4:6922275-6922294 None:intergenic 40.0%
ATTGTGGCATTGTTGTCAAC+AGG - chr3_4:6922590-6922609 Msa0487780:intron 40.0%
TTGTGGCATTGTTGTCAACA+GGG - chr3_4:6922591-6922610 Msa0487780:intron 40.0%
! TGTCAACAGGGTTCTAATTG+TGG - chr3_4:6922603-6922622 Msa0487780:intron 40.0%
ACGCAAATCTGTAACATACG+CGG - chr3_4:6922710-6922729 Msa0487780:intron 40.0%
AAATCTGTAACATACGCGGA+TGG - chr3_4:6922714-6922733 Msa0487780:intron 40.0%
GGTTTCCCTTTCTATCTTAG+AGG - chr3_4:6922961-6922980 Msa0487780:intron 40.0%
CAAAGATACTCCCCTAACAA+AGG + chr3_4:6923022-6923041 None:intergenic 40.0%
!!! TATTGTTTTTGGCTCCTGAG+AGG - chr3_4:6923221-6923240 Msa0487780:intron 40.0%
TGAGCTAATCTGTTGGAGAA+AGG + chr3_4:6923285-6923304 None:intergenic 40.0%
TCAGTACCCTCAAAAATCCA+AGG - chr3_4:6923306-6923325 Msa0487780:intron 40.0%
CAGTACCCTCAAAAATCCAA+GGG - chr3_4:6923307-6923326 Msa0487780:intron 40.0%
! CTAAGCCCTTGGATTTTTGA+GGG + chr3_4:6923315-6923334 None:intergenic 40.0%
CTTTCTGCAAGCGTTCTAAT+AGG + chr3_4:6923375-6923394 None:intergenic 40.0%
! TTGCAGAAAGCATGGTTGAT+CGG - chr3_4:6923385-6923404 Msa0487780:intron 40.0%
! TTCAGTGCATCTTCGTTTTG+AGG - chr3_4:6923446-6923465 Msa0487780:intron 40.0%
! TCTGCGTGTTTTCTCTGAAT+TGG - chr3_4:6923853-6923872 Msa0487780:intron 40.0%
! CTGCGTGTTTTCTCTGAATT+GGG - chr3_4:6923854-6923873 Msa0487780:intron 40.0%
! TGTTTTCTCTGAATTGGGCA+AGG - chr3_4:6923859-6923878 Msa0487780:intron 40.0%
! CGGTCTTTTGTCTGAATTCA+TGG + chr3_4:6923903-6923922 None:intergenic 40.0%
TTGCCAATATTCCTTTCTGC+TGG - chr3_4:6923932-6923951 Msa0487780:intron 40.0%
CTACCAGCAGAAAGGAATAT+TGG + chr3_4:6923938-6923957 None:intergenic 40.0%
TAATGACAGAAGCCTGAGAT+TGG + chr3_4:6923993-6924012 None:intergenic 40.0%
CAGAGTAGAGTTAATCCAGT+GGG - chr3_4:6924071-6924090 Msa0487780:intron 40.0%
AGAGTAGAGTTAATCCAGTG+GGG - chr3_4:6924072-6924091 Msa0487780:intron 40.0%
AAATGGATATCGCTCGTGAA+AGG - chr3_4:6924398-6924417 Msa0487780:intron 40.0%
GGAGATAGGAATCCTAAGAA+AGG + chr3_4:6924540-6924559 None:intergenic 40.0%
AGCTGCAACATATACTAAGG+TGG + chr3_4:6924635-6924654 None:intergenic 40.0%
ACCTTAGTATATGTTGCAGC+TGG - chr3_4:6924634-6924653 Msa0487780:intron 40.0%
TCCAGCTGCAACATATACTA+AGG + chr3_4:6924638-6924657 None:intergenic 40.0%
CGTGGAAACATCTGTTTAAG+TGG + chr3_4:6924691-6924710 None:intergenic 40.0%
TGTCACAAATTCCATTCTCC+TGG + chr3_4:6924810-6924829 None:intergenic 40.0%
ACACGTGTGTTTATGATGCA+GGG - chr3_4:6924827-6924846 Msa0487780:intron 40.0%
GGTCACAGGAGATATATGTA+TGG - chr3_4:6924947-6924966 Msa0487780:intron 40.0%
CACAGGAGATATATGTATGG+TGG - chr3_4:6924950-6924969 Msa0487780:intron 40.0%
ACGACGTTTGATCATTATGG+AGG - chr3_4:6925122-6925141 Msa0487780:intron 40.0%
AAGCCAAATCCCACTAAATG+GGG + chr3_4:6925168-6925187 None:intergenic 40.0%
CAAGCCAAATCCCACTAAAT+GGG + chr3_4:6925169-6925188 None:intergenic 40.0%
CGTCATACAACAACAACAAC+AGG + chr3_4:6925195-6925214 None:intergenic 40.0%
TTGTATGACGAACAATGGGT+GGG - chr3_4:6925205-6925224 Msa0487780:intron 40.0%
! TTGGCTGCTTAGAGCTTTAT+GGG - chr3_4:6925355-6925374 Msa0487780:intron 40.0%
GGGAGTTGCTATCTCATTTA+TGG - chr3_4:6925375-6925394 Msa0487780:intron 40.0%
GGCATCAAAAATCTTAGGAC+TGG + chr3_4:6925484-6925503 None:intergenic 40.0%
! TCCTAAGATTTTTGATGCCC+TGG - chr3_4:6925485-6925504 Msa0487780:intron 40.0%
! TCCAGGGCATCAAAAATCTT+AGG + chr3_4:6925489-6925508 None:intergenic 40.0%
!! GCAACTTTATTGATTCGTCC+AGG + chr3_4:6925506-6925525 None:intergenic 40.0%
AACTAAACAAATGGTGCCCT+GGG - chr3_4:6925693-6925712 Msa0487780:intron 40.0%
TGTACAATTAGGGAGATCAG+GGG + chr3_4:6925749-6925768 None:intergenic 40.0%
GATGTACAATTAGGGAGATC+AGG + chr3_4:6925751-6925770 None:intergenic 40.0%
! AGGTTCTAATCAGCCTAAGA+AGG + chr3_4:6925837-6925856 None:intergenic 40.0%
TATCTTTCAGAAGTCCCTTC+TGG - chr3_4:6925885-6925904 Msa0487780:intron 40.0%
TACAAATGCATCCACCAGAA+GGG + chr3_4:6925902-6925921 None:intergenic 40.0%
TTACAAATGCATCCACCAGA+AGG + chr3_4:6925903-6925922 None:intergenic 40.0%
CTTCGCCATAGTGATCAAAA+GGG - chr3_4:6925992-6926011 Msa0487780:intron 40.0%
AAAGGGAACCGAGGTAAAAA+AGG - chr3_4:6926009-6926028 Msa0487780:intron 40.0%
! CTGGCATGGGAAAAGTATAT+AGG + chr3_4:6926045-6926064 None:intergenic 40.0%
TTACACATGCAATCTGGCAT+GGG + chr3_4:6926058-6926077 None:intergenic 40.0%
TTTACACATGCAATCTGGCA+TGG + chr3_4:6926059-6926078 None:intergenic 40.0%
ACCTGTTTACACATGCAATC+TGG + chr3_4:6926064-6926083 None:intergenic 40.0%
CTAATTTGGCACATGACATG+AGG + chr3_4:6926512-6926531 None:intergenic 40.0%
CATGCACTGCTAATCTGAAA+AGG + chr3_4:6926582-6926601 None:intergenic 40.0%
CTGAACACAACTCAAGGGAT+GGG + chr3_4:6915021-6915040 None:intergenic 45.0%
TCTGAACACAACTCAAGGGA+TGG + chr3_4:6915022-6915041 None:intergenic 45.0%
TGTATGTGTGTGTGGTTGAG+AGG + chr3_4:6915057-6915076 None:intergenic 45.0%
CTATAAAGAGAACCAGGAGG+AGG + chr3_4:6915499-6915518 None:intergenic 45.0%
GAAAGCTTGGAGTGTGAAAG+AGG - chr3_4:6915879-6915898 Msa0487780:intron 45.0%
TAGCAGCTCTTTAACATCCC+TGG + chr3_4:6916521-6916540 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG - chr3_4:6916879-6916898 Msa0487780:intron 45.0%
AAGATGCAGAGGAAAAGGGT+GGG - chr3_4:6916880-6916899 Msa0487780:intron 45.0%
CAGAAAGGTAACCAACCTCT+AGG + chr3_4:6916958-6916977 None:intergenic 45.0%
AGAGTGAGAGCCAATGATGT+TGG - chr3_4:6917156-6917175 Msa0487780:intron 45.0%
GAAAGGAAGATGCGTATTGG+TGG - chr3_4:6917203-6917222 Msa0487780:CDS 45.0%
CAGAGAAAATGAAGGTCGAC+TGG - chr3_4:6917269-6917288 Msa0487780:CDS 45.0%
TCAGAGGAGAAGCTTCCAAT+TGG - chr3_4:6917308-6917327 Msa0487780:CDS 45.0%
CAAGCATATCCCATAGGTCT+GGG + chr3_4:6917408-6917427 None:intergenic 45.0%
TCAAGCATATCCCATAGGTC+TGG + chr3_4:6917409-6917428 None:intergenic 45.0%
CAGACTCAAGCATATCCCAT+AGG + chr3_4:6917414-6917433 None:intergenic 45.0%
GATATGCTTGAGTCTGCAGA+AGG - chr3_4:6917418-6917437 Msa0487780:intron 45.0%
!! AGAGTCAAAGGAGGTTGGTA+AGG - chr3_4:6917495-6917514 Msa0487780:intron 45.0%
! GTTGGTAAGGAGACAAACTC+TGG - chr3_4:6917508-6917527 Msa0487780:intron 45.0%
CTTCAGATGCAACAAGAGAC+TGG - chr3_4:6917854-6917873 Msa0487780:intron 45.0%
TTTCCCTTCCTCCTTGGATT+GGG + chr3_4:6917881-6917900 None:intergenic 45.0%
!! ATTGCAAGTTGGTTGATGCC+AGG + chr3_4:6917958-6917977 None:intergenic 45.0%
TGGCATCAACCAACTTGCAA+TGG - chr3_4:6917957-6917976 Msa0487780:intron 45.0%
GCAACACACTTGCAACTGAA+CGG - chr3_4:6918001-6918020 Msa0487780:intron 45.0%
GTTTCAACGTCGCTTCAGTT+GGG - chr3_4:6918028-6918047 Msa0487780:intron 45.0%
TTCAGTTGGGAAGGATTGTG+AGG - chr3_4:6918041-6918060 Msa0487780:intron 45.0%
GGAAGGATTGTGAGGTCAAA+AGG - chr3_4:6918049-6918068 Msa0487780:intron 45.0%
!! CCCCCTTTTTCATAACCCAA+TGG + chr3_4:6918212-6918231 None:intergenic 45.0%
TTGGGTTATGAAAAAGGGGG+TGG - chr3_4:6918212-6918231 Msa0487780:intron 45.0%
GAGGAACATGGAAGTGGAAA+GGG - chr3_4:6918722-6918741 Msa0487780:intron 45.0%
! GATCTCTTCAATGGTGGTGA+TGG - chr3_4:6918776-6918795 Msa0487780:intron 45.0%
CGGTTGCCAACCAATTACAA+TGG - chr3_4:6918849-6918868 Msa0487780:intron 45.0%
CCACTCCCATTGTAATTGGT+TGG + chr3_4:6918858-6918877 None:intergenic 45.0%
CCAACCAATTACAATGGGAG+TGG - chr3_4:6918855-6918874 Msa0487780:intron 45.0%
ACAATGGGAGTGGAATTGTG+TGG - chr3_4:6918865-6918884 Msa0487780:intron 45.0%
! TCACTTGAAATGGGCTTGTC+CGG - chr3_4:6918897-6918916 Msa0487780:intron 45.0%
AAAACCGAGTCATTTCCTCC+AGG + chr3_4:6918939-6918958 None:intergenic 45.0%
TAAGGCGACAACTAGGACAA+TGG + chr3_4:6919027-6919046 None:intergenic 45.0%
CACAAAGTAAGGCGACAACT+AGG + chr3_4:6919034-6919053 None:intergenic 45.0%
CTTGCAAGCTACTTGTGTCA+AGG - chr3_4:6919106-6919125 Msa0487780:intron 45.0%
CAAGGCTGAGATGAGAGAAT+TGG + chr3_4:6919169-6919188 None:intergenic 45.0%
ATTCTCTCATCTCAGCCTTG+AGG - chr3_4:6919169-6919188 Msa0487780:intron 45.0%
! TACTTCAAGTTATGGGACCC+TGG - chr3_4:6919233-6919252 Msa0487780:intron 45.0%
GGATAACATAAGTGTCCACC+AGG + chr3_4:6919254-6919273 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG - chr3_4:6919269-6919288 Msa0487780:intron 45.0%
GGACAAGGTGAATCTTTAGG+GGG - chr3_4:6919284-6919303 Msa0487780:intron 45.0%
! GACAAGGTGAATCTTTAGGG+GGG - chr3_4:6919285-6919304 Msa0487780:intron 45.0%
AAAGATGCAGAGGAAAAGGG+TGG - chr3_4:6916879-6916898 Msa0487780:intron 45.0%
AAGATGCAGAGGAAAAGGGT+GGG - chr3_4:6916880-6916899 Msa0487780:intron 45.0%
CAGAAAGGTAACCAACCTCT+AGG + chr3_4:6916958-6916977 None:intergenic 45.0%
GATATGTGATGCAGTTGCTG+TGG - chr3_4:6919713-6919732 Msa0487780:intron 45.0%
AAGATTGAACAGTCTGGGGA+CGG - chr3_4:6920038-6920057 Msa0487780:intron 45.0%
!! CTGACCCCACTTGTTGTAAA+AGG - chr3_4:6920099-6920118 Msa0487780:intron 45.0%
CGGGATGCACTTCAAATTTG+AGG - chr3_4:6920145-6920164 Msa0487780:intron 45.0%
GAGGGAAAATAAGTGAGGCT+AGG - chr3_4:6920223-6920242 Msa0487780:intron 45.0%
TAAGATGACTTCCGACGTTC+AGG + chr3_4:6920469-6920488 None:intergenic 45.0%
CCTTCATCTTGCAGCCATTT+CGG - chr3_4:6920732-6920751 Msa0487780:intron 45.0%
! ACTTGGGAAGCATGTACATG+TGG - chr3_4:6920788-6920807 Msa0487780:CDS 45.0%
! GAAGGTTCTTCCTCAGCTTT+TGG - chr3_4:6920914-6920933 Msa0487780:CDS 45.0%
CACCTCATTTCCAAAAGCTG+AGG + chr3_4:6920927-6920946 None:intergenic 45.0%
CATGAGAGTCTAACTCTGCT+TGG - chr3_4:6921643-6921662 Msa0487780:intron 45.0%
AGAGTCTAACTCTGCTTGGT+GGG - chr3_4:6921647-6921666 Msa0487780:intron 45.0%
!! CAGGGAAGGTATTGAGTCAA+AGG - chr3_4:6922217-6922236 Msa0487780:intron 45.0%
ACTATAATGCCAGGGGATCA+GGG + chr3_4:6922267-6922286 None:intergenic 45.0%
AACTATAATGCCAGGGGATC+AGG + chr3_4:6922268-6922287 None:intergenic 45.0%
TCCCCTGGCATTATAGTTGT+AGG - chr3_4:6922270-6922289 Msa0487780:intron 45.0%
GCCTACAACTATAATGCCAG+GGG + chr3_4:6922274-6922293 None:intergenic 45.0%
GTGCCTACAACTATAATGCC+AGG + chr3_4:6922276-6922295 None:intergenic 45.0%
! CTAATTGTGGTGCTGAGTGA+TGG - chr3_4:6922616-6922635 Msa0487780:intron 45.0%
TGTGTGTGTGTGTGTGTTGA+AGG - chr3_4:6922652-6922671 Msa0487780:intron 45.0%
! CCTAAGCCCTTGGATTTTTG+AGG + chr3_4:6923316-6923335 None:intergenic 45.0%
CCTCAAAAATCCAAGGGCTT+AGG - chr3_4:6923313-6923332 Msa0487780:intron 45.0%
CTTAGGTGCTTTGCCAACTT+TGG - chr3_4:6923330-6923349 Msa0487780:intron 45.0%
TAGAACGCTTGCAGAAAGCA+TGG - chr3_4:6923377-6923396 Msa0487780:intron 45.0%
! AGAAAGCATGGTTGATCGGA+TGG - chr3_4:6923389-6923408 Msa0487780:intron 45.0%
GTGAAGCATAGTTCCCAAAG+TGG - chr3_4:6923411-6923430 Msa0487780:intron 45.0%
AAGCATAGTTCCCAAAGTGG+TGG - chr3_4:6923414-6923433 Msa0487780:intron 45.0%
AGCATAGTTCCCAAAGTGGT+GGG - chr3_4:6923415-6923434 Msa0487780:intron 45.0%
!!! AGTGCATCTTCGTTTTGAGG+AGG - chr3_4:6923449-6923468 Msa0487780:intron 45.0%
CCAAGGAACCAAAACATACC+CGG + chr3_4:6923751-6923770 None:intergenic 45.0%
AGAATGGGGACGAAAGAGTT+AGG - chr3_4:6923830-6923849 Msa0487780:intron 45.0%
ATGCTTTGCTACCAGCAGAA+AGG + chr3_4:6923946-6923965 None:intergenic 45.0%
TCAGGCTTCTGTCATTAGAG+AGG - chr3_4:6923996-6924015 Msa0487780:intron 45.0%
! GGATTAACTCTACTCTGGAG+AGG + chr3_4:6924068-6924087 None:intergenic 45.0%
CCACTGGATTAACTCTACTC+TGG + chr3_4:6924073-6924092 None:intergenic 45.0%
CCAGAGTAGAGTTAATCCAG+TGG - chr3_4:6924070-6924089 Msa0487780:intron 45.0%
GAGTAGAGTTAATCCAGTGG+GGG - chr3_4:6924073-6924092 Msa0487780:intron 45.0%
AGTAGAGTTAATCCAGTGGG+GGG - chr3_4:6924074-6924093 Msa0487780:intron 45.0%
CAGAGCTAACCAAACACACA+CGG + chr3_4:6924286-6924305 None:intergenic 45.0%
TCATGTTGTGAGTATGACGG+TGG - chr3_4:6924358-6924377 Msa0487780:intron 45.0%
CATGTTGTGAGTATGACGGT+GGG - chr3_4:6924359-6924378 Msa0487780:intron 45.0%
ATGTTGTGAGTATGACGGTG+GGG - chr3_4:6924360-6924379 Msa0487780:intron 45.0%
ATATCGCTCGTGAAAGGAGT+TGG - chr3_4:6924404-6924423 Msa0487780:intron 45.0%
AAGATGTCCTTTGACTCCGT+TGG - chr3_4:6924486-6924505 Msa0487780:intron 45.0%
GTAAGGGAATTCCAGGAGAA+TGG - chr3_4:6924796-6924815 Msa0487780:intron 45.0%
GACACGTGTGTTTATGATGC+AGG - chr3_4:6924826-6924845 Msa0487780:intron 45.0%
AAATCCCACTAAATGGGGTC+GGG + chr3_4:6925163-6925182 None:intergenic 45.0%
CAAATCCCACTAAATGGGGT+CGG + chr3_4:6925164-6925183 None:intergenic 45.0%
CCAAGCCAAATCCCACTAAA+TGG + chr3_4:6925170-6925189 None:intergenic 45.0%
CCATTTAGTGGGATTTGGCT+TGG - chr3_4:6925167-6925186 Msa0487780:intron 45.0%
GTTGTATGACGAACAATGGG+TGG - chr3_4:6925204-6925223 Msa0487780:intron 45.0%
TATACCAGACACACACACAC+AGG + chr3_4:6925231-6925250 None:intergenic 45.0%
!! ATGTGCTAGGTTTAGCTCTC+TGG - chr3_4:6925311-6925330 Msa0487780:intron 45.0%
TGTCTTTGTTGCTCTGCTCT+TGG - chr3_4:6925336-6925355 Msa0487780:intron 45.0%
CTTGGCTGCTTAGAGCTTTA+TGG - chr3_4:6925354-6925373 Msa0487780:intron 45.0%
GGGAGATCATCCGTAAAACA+AGG + chr3_4:6925455-6925474 None:intergenic 45.0%
! TTTTACGGATGATCTCCCTC+AGG - chr3_4:6925457-6925476 Msa0487780:CDS 45.0%
!! AATCTTAGGACTGGTCCTGA+GGG + chr3_4:6925475-6925494 None:intergenic 45.0%
!! AAATCTTAGGACTGGTCCTG+AGG + chr3_4:6925476-6925495 None:intergenic 45.0%
CAACTAAACAAATGGTGCCC+TGG - chr3_4:6925692-6925711 Msa0487780:intron 45.0%
GCTTCGCCATAGTGATCAAA+AGG - chr3_4:6925991-6926010 Msa0487780:intron 45.0%
! CGGTTCCCTTTTGATCACTA+TGG + chr3_4:6926000-6926019 None:intergenic 45.0%
TAGTGATCAAAAGGGAACCG+AGG - chr3_4:6926000-6926019 Msa0487780:intron 45.0%
GCCAGATTGCATGTGTAAAC+AGG - chr3_4:6926060-6926079 Msa0487780:intron 45.0%
GCTTGGTCTAGTAACTTGAG+TGG + chr3_4:6926422-6926441 None:intergenic 45.0%
!!! GATTTTTTTTTTTTTTTTTT+GGG + chr3_4:6917118-6917137 None:intergenic 5.0%
!!! TGATTTTTTTTTTTTTTTTT+TGG + chr3_4:6917119-6917138 None:intergenic 5.0%
!!! TATTTTTAAGTTTAAATATA+AGG + chr3_4:6924176-6924195 None:intergenic 5.0%
ACACAACTCAAGGGATGGGA+TGG + chr3_4:6915017-6915036 None:intergenic 50.0%
AGGAGGAAGACGATGGTGTT+TGG + chr3_4:6915473-6915492 None:intergenic 50.0%
TAAAGAGAACCAGGAGGAGG+AGG + chr3_4:6915496-6915515 None:intergenic 50.0%
GCTGAATCAGCAACGCTTGT+CGG - chr3_4:6916236-6916255 Msa0487780:intron 50.0%
AGATGCAGAGGAAAAGGGTG+GGG - chr3_4:6916881-6916900 Msa0487780:intron 50.0%
AGAGGAAAAGGGTGGGGATT+GGG - chr3_4:6916887-6916906 Msa0487780:intron 50.0%
CTAGGCTCTCTAACTCCTAG+AGG - chr3_4:6916940-6916959 Msa0487780:CDS 50.0%
GCTCTCTAACTCCTAGAGGT+TGG - chr3_4:6916944-6916963 Msa0487780:CDS 50.0%
GAGGAGAAGCTTCCAATTGG+TGG - chr3_4:6917311-6917330 Msa0487780:CDS 50.0%
ATGGCAAGCAGAATGCGACA+TGG - chr3_4:6917347-6917366 Msa0487780:intron 50.0%
! GGATCGCTGCTTAGTTTGAG+CGG - chr3_4:6917529-6917548 Msa0487780:intron 50.0%
AATTCCTGATGTGACCGCTC+TGG + chr3_4:6917568-6917587 None:intergenic 50.0%
TGCAGGTCACAATGAATCGG+TGG - chr3_4:6917627-6917646 Msa0487780:intron 50.0%
TGAGACACAGAGAGGTGAGA+AGG - chr3_4:6917681-6917700 Msa0487780:intron 50.0%
AGAGAGGTGAGAAGGAGAGA+AGG - chr3_4:6917689-6917708 Msa0487780:intron 50.0%
GATTGTGATGAAGGCGGATC+TGG + chr3_4:6917748-6917767 None:intergenic 50.0%
GGTGGTGATTGTGATGAAGG+CGG + chr3_4:6917754-6917773 None:intergenic 50.0%
! GGTGGTGGTGATTGTGATGA+AGG + chr3_4:6917757-6917776 None:intergenic 50.0%
TGACTAGAGTCTAGCGACTC+TGG + chr3_4:6917778-6917797 None:intergenic 50.0%
AACCTGCGACAGATCTCCAA+CGG - chr3_4:6917797-6917816 Msa0487780:intron 50.0%
GCATCTGAAGACGACCAATC+CGG + chr3_4:6917844-6917863 None:intergenic 50.0%
TTCCCTTCCTCCTTGGATTG+GGG + chr3_4:6917880-6917899 None:intergenic 50.0%
CTTTCCCTTCCTCCTTGGAT+TGG + chr3_4:6917882-6917901 None:intergenic 50.0%
CGTTTCAACGTCGCTTCAGT+TGG - chr3_4:6918027-6918046 Msa0487780:intron 50.0%
! TGTTTTGTGCCTGACCCACT+AGG + chr3_4:6918317-6918336 None:intergenic 50.0%
CTGCTCCAATGACCTTGAGA+TGG + chr3_4:6918588-6918607 None:intergenic 50.0%
GGAGGAACATGGAAGTGGAA+AGG - chr3_4:6918721-6918740 Msa0487780:intron 50.0%
TCCTCCAGGATCCCATTGAT+GGG + chr3_4:6918925-6918944 None:intergenic 50.0%
TTCCTCCAGGATCCCATTGA+TGG + chr3_4:6918926-6918945 None:intergenic 50.0%
GGATCCTGGAGGAAATGACT+CGG - chr3_4:6918932-6918951 Msa0487780:intron 50.0%
TCATCTCAGCCTTGAGGACA+CGG - chr3_4:6919175-6919194 Msa0487780:intron 50.0%
GAAAAACAGCCGTGTCCTCA+AGG + chr3_4:6919187-6919206 None:intergenic 50.0%
!!! GGACACGGCTGTTTTTCTAG+TGG - chr3_4:6919190-6919209 Msa0487780:intron 50.0%
! TTCAAGTTATGGGACCCTGG+TGG - chr3_4:6919236-6919255 Msa0487780:intron 50.0%
TCACCTTGTCCTCAAGGTGA+AGG + chr3_4:6919275-6919294 None:intergenic 50.0%
AGATGCAGAGGAAAAGGGTG+GGG - chr3_4:6916881-6916900 Msa0487780:intron 50.0%
AGAGGAAAAGGGTGGGGATT+GGG - chr3_4:6916887-6916906 Msa0487780:intron 50.0%
CTAGGCTCTCTAACTCCTAG+AGG - chr3_4:6916940-6916959 Msa0487780:CDS 50.0%
GCTCTCTAACTCCTAGAGGT+TGG - chr3_4:6916944-6916963 Msa0487780:CDS 50.0%
CCGAAATGGCTGCAAGATGA+AGG + chr3_4:6920735-6920754 None:intergenic 50.0%
GAAGAACTGGAAGACCAGTG+AGG + chr3_4:6920978-6920997 None:intergenic 50.0%
!! CACTGGTCTTCCAGTTCTTC+TGG - chr3_4:6920978-6920997 Msa0487780:intron 50.0%
GAGAGTCTAACTCTGCTTGG+TGG - chr3_4:6921646-6921665 Msa0487780:intron 50.0%
ATCTGTTCCAAGTCAGCAGG+GGG + chr3_4:6922196-6922215 None:intergenic 50.0%
CATCTGTTCCAAGTCAGCAG+GGG + chr3_4:6922197-6922216 None:intergenic 50.0%
GCATCTGTTCCAAGTCAGCA+GGG + chr3_4:6922198-6922217 None:intergenic 50.0%
TGCATCTGTTCCAAGTCAGC+AGG + chr3_4:6922199-6922218 None:intergenic 50.0%
!! TGCTGACTTGGAACAGATGC+AGG - chr3_4:6922198-6922217 Msa0487780:intron 50.0%
!! GCTGACTTGGAACAGATGCA+GGG - chr3_4:6922199-6922218 Msa0487780:intron 50.0%
ACTTGGAACAGATGCAGGGA+AGG - chr3_4:6922203-6922222 Msa0487780:intron 50.0%
CATACGCGGATGGAGAATGA+AGG - chr3_4:6922724-6922743 Msa0487780:intron 50.0%
!!! TTTTGGCTCCTGAGAGGACT+TGG - chr3_4:6923227-6923246 Msa0487780:intron 50.0%
! ACTTGGTTCGTGCTTGTTGC+AGG - chr3_4:6923244-6923263 Msa0487780:intron 50.0%
! CTTGGTTCGTGCTTGTTGCA+GGG - chr3_4:6923245-6923264 Msa0487780:intron 50.0%
!!! CCGGGTATGTTTTGGTTCCT+TGG - chr3_4:6923748-6923767 Msa0487780:intron 50.0%
GGCTTCTGTCATTAGAGAGG+AGG - chr3_4:6923999-6924018 Msa0487780:intron 50.0%
GTAGAGTTAATCCAGTGGGG+GGG - chr3_4:6924075-6924094 Msa0487780:intron 50.0%
ACATGCGTTCCGTGTGTGTT+TGG - chr3_4:6924274-6924293 Msa0487780:intron 50.0%
GGCAGAGGAGAAACGTGAAA+TGG - chr3_4:6924381-6924400 Msa0487780:intron 50.0%
AAAGCCTGGTGCAAATCGTG+TGG - chr3_4:6924459-6924478 Msa0487780:intron 50.0%
ATGTCCTTTGACTCCGTTGG+AGG - chr3_4:6924489-6924508 Msa0487780:intron 50.0%
CATACCTCCAACGGAGTCAA+AGG + chr3_4:6924496-6924515 None:intergenic 50.0%
CAGGTAGGGATGATGCTTAG+AGG - chr3_4:6924592-6924611 Msa0487780:intron 50.0%
AGGGATGATGCTTAGAGGCA+TGG - chr3_4:6924597-6924616 Msa0487780:intron 50.0%
! GGGATGATGCTTAGAGGCAT+GGG - chr3_4:6924598-6924617 Msa0487780:intron 50.0%
CTGTGACCCATCAAGAAGTG+AGG + chr3_4:6924935-6924954 None:intergenic 50.0%
! CTCACTTCTTGATGGGTCAC+AGG - chr3_4:6924933-6924952 Msa0487780:intron 50.0%
ACTAAATGGGGTCGGGTACA+TGG + chr3_4:6925156-6925175 None:intergenic 50.0%
ATGTACCCGACCCCATTTAG+TGG - chr3_4:6925155-6925174 Msa0487780:intron 50.0%
TGTACCCGACCCCATTTAGT+GGG - chr3_4:6925156-6925175 Msa0487780:intron 50.0%
CGACCCCATTTAGTGGGATT+TGG - chr3_4:6925162-6925181 Msa0487780:intron 50.0%
ACAATTAGGGAGATCAGGGG+TGG + chr3_4:6925746-6925765 None:intergenic 50.0%
CTTTCAGAAGTCCCTTCTGG+TGG - chr3_4:6925888-6925907 Msa0487780:intron 50.0%
AGCGGCTGTACCCATGCATT+TGG + chr3_4:6915249-6915268 None:intergenic 55.0%
AATGCATGGGTACAGCCGCT+TGG - chr3_4:6915249-6915268 Msa0487780:three_prime_UTR 55.0%
ATGCATGGGTACAGCCGCTT+GGG - chr3_4:6915250-6915269 Msa0487780:three_prime_UTR 55.0%
CGCTCTTACTCCTTCCCAAG+CGG + chr3_4:6915267-6915286 None:intergenic 55.0%
CGCTTGGGAAGGAGTAAGAG+CGG - chr3_4:6915265-6915284 Msa0487780:three_prime_UTR 55.0%
TTGGGAAGGAGTAAGAGCGG+CGG - chr3_4:6915268-6915287 Msa0487780:three_prime_UTR 55.0%
GAATATGGTGGTAGGCTGCC+AGG - chr3_4:6916647-6916666 Msa0487780:intron 55.0%
CAGAGGAAAAGGGTGGGGAT+TGG - chr3_4:6916886-6916905 Msa0487780:intron 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG - chr3_4:6916922-6916941 Msa0487780:intron 55.0%
GCAGCAACTGAGACACAGAG+AGG - chr3_4:6917673-6917692 Msa0487780:intron 55.0%
CTAGAGTCTAGCGACTCTGG+TGG + chr3_4:6917775-6917794 None:intergenic 55.0%
GACGACCAATCCGGTGGTTT+GGG + chr3_4:6917835-6917854 None:intergenic 55.0%
AGACGACCAATCCGGTGGTT+TGG + chr3_4:6917836-6917855 None:intergenic 55.0%
TCTGAAGACGACCAATCCGG+TGG + chr3_4:6917841-6917860 None:intergenic 55.0%
! AAGAGACTGGCCCCAATCCA+AGG - chr3_4:6917867-6917886 Msa0487780:intron 55.0%
TGGCTCTTTCCCTTCCTCCT+TGG + chr3_4:6917887-6917906 None:intergenic 55.0%
ACATACCACCGCCGCTGAAA+TGG - chr3_4:6917923-6917942 Msa0487780:intron 55.0%
!! GCAAGTTGGTTGATGCCAGG+CGG + chr3_4:6917955-6917974 None:intergenic 55.0%
GCGGTCGAACCATTGCAAGT+TGG + chr3_4:6917969-6917988 None:intergenic 55.0%
! GCAAGTGTGTTGCTCGTCGT+CGG + chr3_4:6917994-6918013 None:intergenic 55.0%
CAACGTCGCTTCAGTTGGGA+AGG - chr3_4:6918032-6918051 Msa0487780:intron 55.0%
GAGCAGGAGGAACATGGAAG+TGG - chr3_4:6918716-6918735 Msa0487780:intron 55.0%
CTTGTCCGGCTCCCATCAAT+GGG - chr3_4:6918911-6918930 Msa0487780:intron 55.0%
AGGATCCCATTGATGGGAGC+CGG + chr3_4:6918919-6918938 None:intergenic 55.0%
TCCCATCAATGGGATCCTGG+AGG - chr3_4:6918921-6918940 Msa0487780:intron 55.0%
CAGAGGAAAAGGGTGGGGAT+TGG - chr3_4:6916886-6916905 Msa0487780:intron 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG - chr3_4:6916922-6916941 Msa0487780:intron 55.0%
TGTGATGCAGTTGCTGTGGC+TGG - chr3_4:6919717-6919736 Msa0487780:intron 55.0%
TCTGTTCCAAGTCAGCAGGG+GGG + chr3_4:6922195-6922214 None:intergenic 55.0%
CGCGGATGGAGAATGAAGGT+CGG - chr3_4:6922728-6922747 Msa0487780:intron 55.0%
AGCACGAACCAAGTCCTCTC+AGG + chr3_4:6923238-6923257 None:intergenic 55.0%
! TGGCAAAGCACCTAAGCCCT+TGG + chr3_4:6923326-6923345 None:intergenic 55.0%
CCATCCACACGATTTGCACC+AGG + chr3_4:6924466-6924485 None:intergenic 55.0%
CCTGGTGCAAATCGTGTGGA+TGG - chr3_4:6924463-6924482 Msa0487780:intron 55.0%
TGATGCAGGGCCACTCATCT+AGG - chr3_4:6924840-6924859 Msa0487780:intron 55.0%
GAGCAGCCAACCTAGATGAG+TGG + chr3_4:6924853-6924872 None:intergenic 55.0%
ATGGGTACAGCCGCTTGGGA+AGG - chr3_4:6915254-6915273 Msa0487780:three_prime_UTR 60.0%
GAGGAGGAGGAGGAAGACGA+TGG + chr3_4:6915480-6915499 None:intergenic 60.0%
AGAGAACCAGGAGGAGGAGG+AGG + chr3_4:6915493-6915512 None:intergenic 60.0%
GCTTGAGTCTGCAGAAGGCG+AGG - chr3_4:6917423-6917442 Msa0487780:intron 60.0%
GCATCGAACCACCACCAGAG+CGG - chr3_4:6917551-6917570 Msa0487780:intron 60.0%
TGATGTGACCGCTCTGGTGG+TGG + chr3_4:6917562-6917581 None:intergenic 60.0%
ACCACCAGAGCGGTCACATC+AGG - chr3_4:6917561-6917580 Msa0487780:intron 60.0%
TCCTGATGTGACCGCTCTGG+TGG + chr3_4:6917565-6917584 None:intergenic 60.0%
GATCTGGTGTCTCCGGTGGA+GGG + chr3_4:6917732-6917751 None:intergenic 60.0%
GAAGGCGGATCTGGTGTCTC+CGG + chr3_4:6917739-6917758 None:intergenic 60.0%
GAGTCTAGCGACTCTGGTGG+TGG + chr3_4:6917772-6917791 None:intergenic 60.0%
CTCCGTTGGAGATCTGTCGC+AGG + chr3_4:6917802-6917821 None:intergenic 60.0%
AGAACCGCCACCCAAACCAC+CGG - chr3_4:6917822-6917841 Msa0487780:intron 60.0%
! CAATCCGGTGGTTTGGGTGG+CGG + chr3_4:6917829-6917848 None:intergenic 60.0%
! GACCAATCCGGTGGTTTGGG+TGG + chr3_4:6917832-6917851 None:intergenic 60.0%
! AGACTGGCCCCAATCCAAGG+AGG - chr3_4:6917870-6917889 Msa0487780:intron 60.0%
TGGCCCCAATCCAAGGAGGA+AGG - chr3_4:6917874-6917893 Msa0487780:intron 60.0%
GGCCCCAATCCAAGGAGGAA+GGG - chr3_4:6917875-6917894 Msa0487780:intron 60.0%
! TGGTTGATGCCAGGCGGTTC+CGG + chr3_4:6917949-6917968 None:intergenic 60.0%
! GTGTTGCTCGTCGTCGGTAG+CGG + chr3_4:6917988-6918007 None:intergenic 60.0%
GCTTGTCCGGCTCCCATCAA+TGG - chr3_4:6918910-6918929 Msa0487780:intron 60.0%
GGCTCCCATCAATGGGATCC+TGG - chr3_4:6918918-6918937 Msa0487780:intron 60.0%
AATGCCACACCCTGATCCCC+TGG - chr3_4:6922255-6922274 Msa0487780:intron 60.0%
AATGCCAGGGGATCAGGGTG+TGG + chr3_4:6922262-6922281 None:intergenic 60.0%
CTACATCATCACCCCCCCAC+TGG + chr3_4:6924089-6924108 None:intergenic 60.0%
TGAGTATGACGGTGGGGCAG+AGG - chr3_4:6924366-6924385 Msa0487780:intron 60.0%
GCTCGTGAAAGGAGTTGGCG+AGG - chr3_4:6924409-6924428 Msa0487780:intron 60.0%
GCAGGGCCACTCATCTAGGT+TGG - chr3_4:6924844-6924863 Msa0487780:intron 60.0%
TGGGCCTGTGTGTGTGTGTC+TGG - chr3_4:6925224-6925243 Msa0487780:intron 60.0%
! GAGATCAGGGGTGGCCTTGA+GGG + chr3_4:6925737-6925756 None:intergenic 60.0%
AGGAGTAAGAGCGGCGGCCT+CGG - chr3_4:6915274-6915293 Msa0487780:three_prime_UTR 65.0%
CTTCCTCCTCCTCCTCCTCC+TGG - chr3_4:6915484-6915503 Msa0487780:three_prime_UTR 65.0%
GAACCAGGAGGAGGAGGAGG+AGG + chr3_4:6915490-6915509 None:intergenic 65.0%
TCCCGATCTGCACCCTCCAC+CGG - chr3_4:6917717-6917736 Msa0487780:intron 65.0%
! TCCGGTGGAGGGTGCAGATC+GGG + chr3_4:6917721-6917740 None:intergenic 65.0%
! CTCCGGTGGAGGGTGCAGAT+CGG + chr3_4:6917722-6917741 None:intergenic 65.0%
GGATCTGGTGTCTCCGGTGG+AGG + chr3_4:6917733-6917752 None:intergenic 65.0%
! TGGGTGGCGGTTCTCTCCGT+TGG + chr3_4:6917816-6917835 None:intergenic 65.0%
CGCCACCCAAACCACCGGAT+TGG - chr3_4:6917827-6917846 Msa0487780:intron 65.0%
ACCACCGCCGCTGAAATGGC+CGG - chr3_4:6917927-6917946 Msa0487780:intron 65.0%
GGTTCCGGCCATTTCAGCGG+CGG + chr3_4:6917934-6917953 None:intergenic 65.0%
GGCGGTTCCGGCCATTTCAG+CGG + chr3_4:6917937-6917956 None:intergenic 65.0%
CTGAAATGGCCGGAACCGCC+TGG - chr3_4:6917937-6917956 Msa0487780:intron 65.0%
! TGTGGTCCCCCCTGCTGACT+TGG - chr3_4:6922186-6922205 Msa0487780:intron 65.0%
! TCAGGGGTGGCCTTGAGGGT+GGG + chr3_4:6925733-6925752 None:intergenic 65.0%
! ATCAGGGGTGGCCTTGAGGG+TGG + chr3_4:6925734-6925753 None:intergenic 65.0%
! GGAGATCAGGGGTGGCCTTG+AGG + chr3_4:6925738-6925757 None:intergenic 65.0%
AGTAAGAGCGGCGGCCTCGG+TGG - chr3_4:6915277-6915296 Msa0487780:three_prime_UTR 70.0%
!! TTCCAGCACCGACGCCACCG+AGG + chr3_4:6915294-6915313 None:intergenic 70.0%
GGCGGATCTGGTGTCTCCGG+TGG + chr3_4:6917736-6917755 None:intergenic 70.0%
TCCGGCCATTTCAGCGGCGG+TGG + chr3_4:6917931-6917950 None:intergenic 70.0%
GGCGGGAGGAGGACAACCCA+GGG + chr3_4:6925712-6925731 None:intergenic 70.0%
GGGCGGGAGGAGGACAACCC+AGG + chr3_4:6925713-6925732 None:intergenic 75.0%
CCTTGAGGGTGGGCGGGAGG+AGG + chr3_4:6925723-6925742 None:intergenic 75.0%
CCTCCTCCCGCCCACCCTCA+AGG - chr3_4:6925720-6925739 Msa0487780:intron 75.0%
! TGGCCTTGAGGGTGGGCGGG+AGG + chr3_4:6925726-6925745 None:intergenic 75.0%
! GGGTGGCCTTGAGGGTGGGC+GGG + chr3_4:6925729-6925748 None:intergenic 75.0%
! GGGGTGGCCTTGAGGGTGGG+CGG + chr3_4:6925730-6925749 None:intergenic 75.0%
! AGCGGCGGCCTCGGTGGCGT+CGG - chr3_4:6915283-6915302 Msa0487780:three_prime_UTR 80.0%
!!! GGCCTCGGTGGCGTCGGTGC+TGG - chr3_4:6915289-6915308 Msa0487780:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 6914990 6926699 6914990 ID=Msa0487780;Name=Msa0487780
chr3_4 mRNA 6914990 6926699 6914990 ID=Msa0487780-mRNA-1;Parent=Msa0487780;Name=Msa0487780-mRNA-1;_AED=0.16;_eAED=0.16;_QI=260|0.66|0.8|0.9|0.66|0.8|10|567|560
chr3_4 exon 6914990 6915731 6914990 ID=Msa0487780-mRNA-1:exon:2452;Parent=Msa0487780-mRNA-1
chr3_4 exon 6916651 6916841 6916651 ID=Msa0487780-mRNA-1:exon:2451;Parent=Msa0487780-mRNA-1
chr3_4 exon 6916927 6917094 6916927 ID=Msa0487780-mRNA-1:exon:2450;Parent=Msa0487780-mRNA-1
chr3_4 exon 6917179 6917346 6917179 ID=Msa0487780-mRNA-1:exon:2449;Parent=Msa0487780-mRNA-1
chr3_4 exon 6918219 6918423 6918219 ID=Msa0487780-mRNA-1:exon:2448;Parent=Msa0487780-mRNA-1
chr3_4 exon 6920746 6920943 6920746 ID=Msa0487780-mRNA-1:exon:2447;Parent=Msa0487780-mRNA-1
chr3_4 exon 6921173 6921258 6921173 ID=Msa0487780-mRNA-1:exon:2446;Parent=Msa0487780-mRNA-1
chr3_4 exon 6925432 6925499 6925432 ID=Msa0487780-mRNA-1:exon:2445;Parent=Msa0487780-mRNA-1
chr3_4 exon 6925743 6925815 6925743 ID=Msa0487780-mRNA-1:exon:2444;Parent=Msa0487780-mRNA-1
chr3_4 exon 6926089 6926699 6926089 ID=Msa0487780-mRNA-1:exon:2443;Parent=Msa0487780-mRNA-1
chr3_4 five_prime_UTR 6926440 6926699 6926440 ID=Msa0487780-mRNA-1:five_prime_utr;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6926089 6926439 6926089 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6925743 6925815 6925743 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6925432 6925499 6925432 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6921173 6921258 6921173 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6920746 6920943 6920746 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6918219 6918423 6918219 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6917179 6917346 6917179 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6916927 6917094 6916927 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6916651 6916841 6916651 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 CDS 6915557 6915731 6915557 ID=Msa0487780-mRNA-1:cds;Parent=Msa0487780-mRNA-1
chr3_4 three_prime_UTR 6914990 6915556 6914990 ID=Msa0487780-mRNA-1:three_prime_utr;Parent=Msa0487780-mRNA-1
Gene Sequence

>Msa0487780

ATGCATGGGTACAGCCGCTTGGGAAGGAGTAAGAGCGGCGGCCTCGGTGGCGTCGGTGCTGGAAAATCCTCTTCTTCCAAATCATCATGGTCCAAATTTGTATATCTTGTTATGTCAGCTATTTTCAGAAGAAGAGGGTTATTGCTATTTGCACCCCTATTATATATTGCTGGAATGTTATTGTATATGGGTTCTTTAAGCTTTGATATTGTTCTTGTTTCCAAACACCATCGTCTTCCTCCTCCTCCTCCTCCTGGTTCTCTTTATAGAAGTCCTCAACTCTTTCATAATCTTTGGCCTTTCATGCTAAATGACTCCTCCTTCTCTTCCAATAATTCAACTTCTCTCAATTTAATGAAAGCTTGGAGTGTGAAAGAGGATAGACAATGGAAGCCATGTGCTAATAAAACTCTTCCTCAAATAGAATTTCCCAAGTCAAATGGTTACCTTATAATTGAAGCAAATGGCGGGCTGAATCAGCAACGCTTGTCGCACTATTCACTTGGAACAGAAGATCAATCGAATATCCTGAACGTCGGAAGTCATCTTAAACTTACTTATGAATGCAAGACTCATAACCATTTCGGTGACATTTTCGATGAAAATTTCTTCATACAGTCACTTGGGAAGCATGTACATGTGGTAAGAGAACTTCCAGATGACATACTTCAACAGTTTGACAATAACATAAGTAACATTGTCAATCTTAGAGTAAAAGCTTGGTCTAGTCCAGCTCACTATCTTAAGAAGGTTCTTCCTCAGCTTTTGGAAATGAGGGCTGTTCGTATTGCACCTTTCTCCAACAGATTAGCTCAATCAGTACCCTCAAAAATCCAAGGGCTTAGGTGCTTTGCCAACTTTGGAGCTCTTAGATTTTCTGAACCTATTAGAACGCTTGCAGAAAGCATGGTTGATCGGATGGTGAAGCATAGTTCCCAAAGTGGTGGGAAATATGTTTCAGTGCATCTTCGTTTTGAGGAGGATATGGTTGCATTTTCATGTTGTGAGTATGACGGTGGGGCAGAGGAGAAACGTGAAATGGATATCGCTCGTGAAAGGAGTTGGCGAGGTAAATTCAAAAGAAAGCATAGGATAATAAAGCCTGGTGCAAATCGTGTGGATGGAAGATGTCCTTTGACTCCGTTGGAGGTAGGGATGATGCTTAGAGGCATGGGCTTCGATAATACCACCTTAGTATATGTTGCAGCTGGAAAAATTTATAAAGAACAAAAGTACATGGCACCACTTAAACAGATGTTTCCACGATTACAAACAAAAGATACACTGGCAACTCCAGAAGAGCTTGCTCAATTTAAGGGCCACTCATCTAGGTTGGCTGCTCTTGATTATACTGTTTGTCTTCATAGTGAAGTATTTGTTACAACTCAAGGTGGAAATTTTCCTCACTTCTTGATGGGTCACAGGAGATATATGTATGGTGGGCATTCAAAGACAATTAAACCTGATAAAAGAAGATTGGCTCTATTATTCGATAACCCTAACATAAGATGGGAAGTATTTAAGCAACAAATGAAAGACATGCTTCGCCATAGTGATCAAAAGGGAACCGAGGTAAAAAAGGCTAGTGAATCCCTATATACTTTTCCCATGCCAGATTGCATGTGTAAACAGGTTGAACCCAAAAATGAAAATGCTAACATTGGGAAAACCATGAAATTATAA
Protein sequence

>Msa0487780

MHGYSRLGRSKSGGLGGVGAGKSSSSKSSWSKFVYLVMSAIFRRRGLLLFAPLLYIAGMLLYMGSLSFDIVLVSKHHRLPPPPPPGSLYRSPQLFHNLWPFMLNDSSFSSNNSTSLNLMKAWSVKEDRQWKPCANKTLPQIEFPKSNGYLIIEANGGLNQQRLSHYSLGTEDQSNILNVGSHLKLTYECKTHNHFGDIFDENFFIQSLGKHVHVVRELPDDILQQFDNNISNIVNLRVKAWSSPAHYLKKVLPQLLEMRAVRIAPFSNRLAQSVPSKIQGLRCFANFGALRFSEPIRTLAESMVDRMVKHSSQSGGKYVSVHLRFEEDMVAFSCCEYDGGAEEKREMDIARERSWRGKFKRKHRIIKPGANRVDGRCPLTPLEVGMMLRGMGFDNTTLVYVAAGKIYKEQKYMAPLKQMFPRLQTKDTLATPEELAQFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYMYGGHSKTIKPDKRRLALLFDNPNIRWEVFKQQMKDMLRHSDQKGTEVKKASESLYTFPMPDCMCKQVEPKNENANIGKTMKL*