Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081270 | XP_013450287.2 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081270 | A0A396H8I4 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1081270 | 0.860086 | 2.639561e-63 | -8.615850e-47 |
| Msa0018920 | Msa1081270 | 0.846821 | 1.707315e-59 | -8.615850e-47 |
| Msa0020540 | Msa1081270 | 0.800084 | 1.701594e-48 | -8.615850e-47 |
| Msa0027800 | Msa1081270 | 0.842642 | 2.282244e-58 | -8.615850e-47 |
| Msa0030070 | Msa1081270 | 0.845269 | 4.513024e-59 | -8.615850e-47 |
| Msa0032980 | Msa1081270 | 0.838066 | 3.585709e-57 | -8.615850e-47 |
| Msa0040640 | Msa1081270 | 0.839120 | 1.915645e-57 | -8.615850e-47 |
| Msa0045620 | Msa1081270 | 0.810790 | 9.674325e-51 | -8.615850e-47 |
| Msa0050150 | Msa1081270 | 0.814029 | 1.896598e-51 | -8.615850e-47 |
| Msa0050530 | Msa1081270 | 0.856349 | 3.417287e-62 | -8.615850e-47 |
| Msa0078130 | Msa1081270 | 0.823889 | 1.086449e-53 | -8.615850e-47 |
| Msa0079410 | Msa1081270 | 0.803379 | 3.586178e-49 | -8.615850e-47 |
| Msa0080370 | Msa1081270 | 0.839742 | 1.321064e-57 | -8.615850e-47 |
| Msa0080440 | Msa1081270 | 0.839325 | 1.695271e-57 | -8.615850e-47 |
| Msa0090440 | Msa1081270 | 0.838722 | 2.429067e-57 | -8.615850e-47 |
| Msa0091350 | Msa1081270 | 0.843904 | 1.051778e-58 | -8.615850e-47 |
| Msa0094180 | Msa1081270 | 0.817640 | 2.968716e-52 | -8.615850e-47 |
| Msa0100600 | Msa1081270 | 0.862970 | 3.473825e-64 | -8.615850e-47 |
| Msa0100890 | Msa1081270 | 0.855962 | 4.435062e-62 | -8.615850e-47 |
| Msa0106630 | Msa1081270 | 0.816932 | 4.284431e-52 | -8.615850e-47 |
| Msa0109730 | Msa1081270 | 0.825831 | 3.783231e-54 | -8.615850e-47 |
| Msa0605520 | Msa1081270 | 0.821291 | 4.366040e-53 | -8.615850e-47 |
| Msa0607330 | Msa1081270 | 0.814078 | 1.850506e-51 | -8.615850e-47 |
| Msa0618840 | Msa1081270 | 0.860102 | 2.609969e-63 | -8.615850e-47 |
| Msa0618990 | Msa1081270 | 0.862001 | 6.900811e-64 | -8.615850e-47 |
| Msa0620500 | Msa1081270 | 0.832551 | 8.864011e-56 | -8.615850e-47 |
| Msa0620510 | Msa1081270 | 0.804251 | 2.363165e-49 | -8.615850e-47 |
| Msa0623310 | Msa1081270 | 0.800841 | 1.192769e-48 | -8.615850e-47 |
| Msa0625620 | Msa1081270 | 0.843941 | 1.027900e-58 | -8.615850e-47 |
| Msa0630440 | Msa1081270 | 0.818490 | 1.907483e-52 | -8.615850e-47 |
| Msa0640800 | Msa1081270 | 0.846325 | 2.332213e-59 | -8.615850e-47 |
| Msa0642550 | Msa1081270 | 0.800622 | 1.322183e-48 | -8.615850e-47 |
| Msa0647440 | Msa1081270 | 0.849567 | 2.975782e-60 | -8.615850e-47 |
| Msa0648040 | Msa1081270 | 0.814542 | 1.461426e-51 | -8.615850e-47 |
| Msa0648760 | Msa1081270 | 0.829587 | 4.735855e-55 | -8.615850e-47 |
| Msa0653160 | Msa1081270 | 0.801743 | 7.797146e-49 | -8.615850e-47 |
| Msa0657210 | Msa1081270 | 0.836877 | 7.234460e-57 | -8.615850e-47 |
| Msa0659200 | Msa1081270 | 0.847741 | 9.544213e-60 | -8.615850e-47 |
| Msa0663290 | Msa1081270 | 0.853285 | 2.643177e-61 | -8.615850e-47 |
| Msa0664070 | Msa1081270 | 0.866136 | 3.554835e-65 | -8.615850e-47 |
| Msa0684750 | Msa1081270 | 0.823110 | 1.652340e-53 | -8.615850e-47 |
| Msa0688380 | Msa1081270 | 0.829978 | 3.802606e-55 | -8.615850e-47 |
| Msa0688620 | Msa1081270 | 0.822687 | 2.073521e-53 | -8.615850e-47 |
| Msa0689830 | Msa1081270 | 0.823276 | 1.511191e-53 | -8.615850e-47 |
| Msa0690320 | Msa1081270 | 0.835025 | 2.133481e-56 | -8.615850e-47 |
| Msa0690570 | Msa1081270 | 0.802428 | 5.635564e-49 | -8.615850e-47 |
| Msa0690740 | Msa1081270 | 0.826110 | 3.247861e-54 | -8.615850e-47 |
| Msa0701250 | Msa1081270 | 0.834204 | 3.431688e-56 | -8.615850e-47 |
| Msa0705140 | Msa1081270 | 0.809810 | 1.574052e-50 | -8.615850e-47 |
| Msa0705180 | Msa1081270 | 0.856742 | 2.618785e-62 | -8.615850e-47 |
| Msa0707260 | Msa1081270 | 0.863019 | 3.354803e-64 | -8.615850e-47 |
| Msa0708980 | Msa1081270 | 0.869685 | 2.572984e-66 | -8.615850e-47 |
| Msa0713080 | Msa1081270 | 0.809853 | 1.540631e-50 | -8.615850e-47 |
| Msa0717900 | Msa1081270 | 0.849617 | 2.882443e-60 | -8.615850e-47 |
| Msa0720280 | Msa1081270 | 0.856633 | 2.819322e-62 | -8.615850e-47 |
| Msa0737020 | Msa1081270 | 0.811678 | 6.207106e-51 | -8.615850e-47 |
| Msa0749190 | Msa1081270 | 0.819359 | 1.210520e-52 | -8.615850e-47 |
| Msa0750520 | Msa1081270 | 0.827232 | 1.752781e-54 | -8.615850e-47 |
| Msa0751720 | Msa1081270 | 0.803237 | 3.837166e-49 | -8.615850e-47 |
| Msa0771910 | Msa1081270 | 0.808644 | 2.799310e-50 | -8.615850e-47 |
| Msa0803140 | Msa1081270 | 0.866436 | 2.854955e-65 | -8.615850e-47 |
| Msa0804170 | Msa1081270 | 0.803821 | 2.902440e-49 | -8.615850e-47 |
| Msa0816080 | Msa1081270 | 0.840669 | 7.564197e-58 | -8.615850e-47 |
| Msa0816230 | Msa1081270 | 0.802480 | 5.498352e-49 | -8.615850e-47 |
| Msa0831820 | Msa1081270 | 0.840568 | 8.039302e-58 | -8.615850e-47 |
| Msa0837680 | Msa1081270 | 0.868060 | 8.641897e-66 | -8.615850e-47 |
| Msa0841500 | Msa1081270 | 0.866960 | 1.945546e-65 | -8.615850e-47 |
| Msa0125590 | Msa1081270 | 0.851992 | 6.182558e-61 | -8.615850e-47 |
| Msa0127340 | Msa1081270 | 0.838534 | 2.715939e-57 | -8.615850e-47 |
| Msa0131810 | Msa1081270 | 0.828827 | 7.239761e-55 | -8.615850e-47 |
| Msa0153210 | Msa1081270 | 0.813381 | 2.634361e-51 | -8.615850e-47 |
| Msa0156090 | Msa1081270 | 0.814621 | 1.403526e-51 | -8.615850e-47 |
| Msa0165830 | Msa1081270 | 0.821771 | 3.381297e-53 | -8.615850e-47 |
| Msa0168380 | Msa1081270 | 0.866011 | 3.893331e-65 | -8.615850e-47 |
| Msa0170070 | Msa1081270 | 0.823920 | 1.067892e-53 | -8.615850e-47 |
| Msa0184700 | Msa1081270 | 0.852709 | 3.862892e-61 | -8.615850e-47 |
| Msa0186180 | Msa1081270 | 0.819361 | 1.209298e-52 | -8.615850e-47 |
| Msa0204970 | Msa1081270 | 0.878804 | 2.087155e-69 | -8.615850e-47 |
| Msa0225800 | Msa1081270 | 0.825573 | 4.353680e-54 | -8.615850e-47 |
| Msa0364680 | Msa1081270 | 0.802381 | 5.764043e-49 | -8.615850e-47 |
| Msa0373170 | Msa1081270 | 0.863454 | 2.460426e-64 | -8.615850e-47 |
| Msa0382230 | Msa1081270 | 0.838576 | 2.649231e-57 | -8.615850e-47 |
| Msa0388250 | Msa1081270 | 0.831692 | 1.445589e-55 | -8.615850e-47 |
| Msa0388620 | Msa1081270 | 0.977868 | 1.195904e-144 | -8.615850e-47 |
| Msa0412130 | Msa1081270 | 0.802292 | 6.011899e-49 | -8.615850e-47 |
| Msa0413170 | Msa1081270 | 0.804334 | 2.270542e-49 | -8.615850e-47 |
| Msa0415820 | Msa1081270 | 0.803323 | 3.682775e-49 | -8.615850e-47 |
| Msa0416210 | Msa1081270 | 0.834849 | 2.362177e-56 | -8.615850e-47 |
| Msa0420430 | Msa1081270 | 0.805078 | 1.588018e-49 | -8.615850e-47 |
| Msa0421750 | Msa1081270 | 0.853868 | 1.797808e-61 | -8.615850e-47 |
| Msa0422690 | Msa1081270 | 0.802387 | 5.748385e-49 | -8.615850e-47 |
| Msa0429970 | Msa1081270 | 0.846373 | 2.262279e-59 | -8.615850e-47 |
| Msa0433630 | Msa1081270 | 0.852629 | 4.073619e-61 | -8.615850e-47 |
| Msa0456670 | Msa1081270 | 0.808007 | 3.827128e-50 | -8.615850e-47 |
| Msa0458100 | Msa1081270 | 0.844070 | 9.490208e-59 | -8.615850e-47 |
| Msa0461550 | Msa1081270 | 0.815423 | 9.314160e-52 | -8.615850e-47 |
| Msa0466520 | Msa1081270 | 0.809878 | 1.521761e-50 | -8.615850e-47 |
| Msa0466880 | Msa1081270 | 0.801119 | 1.046583e-48 | -8.615850e-47 |
| Msa0467690 | Msa1081270 | 0.860923 | 1.471835e-63 | -8.615850e-47 |
| Msa0468390 | Msa1081270 | 0.827218 | 1.766365e-54 | -8.615850e-47 |
| Msa0468620 | Msa1081270 | 0.806291 | 8.833163e-50 | -8.615850e-47 |
| Msa0477630 | Msa1081270 | 0.806069 | 9.836577e-50 | -8.615850e-47 |
| Msa0982960 | Msa1081270 | 0.845734 | 3.376879e-59 | -8.615850e-47 |
| Msa0999950 | Msa1081270 | 0.816769 | 4.661227e-52 | -8.615850e-47 |
| Msa1000780 | Msa1081270 | 0.842912 | 1.935324e-58 | -8.615850e-47 |
| Msa1008680 | Msa1081270 | 0.804407 | 2.192669e-49 | -8.615850e-47 |
| Msa1008850 | Msa1081270 | 0.807902 | 4.027930e-50 | -8.615850e-47 |
| Msa1021560 | Msa1081270 | 0.821749 | 3.422230e-53 | -8.615850e-47 |
| Msa1041370 | Msa1081270 | 0.978795 | 1.402747e-146 | -8.615850e-47 |
| Msa1050260 | Msa1081270 | 0.813565 | 2.400369e-51 | -8.615850e-47 |
| Msa1071410 | Msa1081270 | 0.826961 | 2.035145e-54 | -8.615850e-47 |
| Msa1076020 | Msa1081270 | 0.808626 | 2.823742e-50 | -8.615850e-47 |
| Msa1078860 | Msa1081270 | 0.853072 | 3.042327e-61 | -8.615850e-47 |
| Msa1078990 | Msa1081270 | 0.828858 | 7.116802e-55 | -8.615850e-47 |
| Msa1081270 | Msa1083630 | 0.818137 | 2.293162e-52 | -8.615850e-47 |
| Msa1081270 | Msa1085680 | 0.821647 | 3.613040e-53 | -8.615850e-47 |
| Msa1081270 | Msa1105540 | 0.823896 | 1.082179e-53 | -8.615850e-47 |
| Msa1081270 | Msa1105580 | 0.812907 | 3.347482e-51 | -8.615850e-47 |
| Msa1081270 | Msa1106220 | 0.837579 | 4.783628e-57 | -8.615850e-47 |
| Msa1081270 | Msa1124210 | 0.805726 | 1.161468e-49 | -8.615850e-47 |
| Msa1081270 | Msa1128620 | 0.823962 | 1.044098e-53 | -8.615850e-47 |
| Msa1081270 | Msa1144990 | 0.836863 | 7.290552e-57 | -8.615850e-47 |
| Msa1081270 | Msa1148630 | 0.801374 | 9.281367e-49 | -8.615850e-47 |
| Msa1081270 | Msa1148930 | 0.825521 | 4.478905e-54 | -8.615850e-47 |
| Msa1081270 | Msa1162360 | 0.831604 | 1.519708e-55 | -8.615850e-47 |
| Msa1081270 | Msa1163180 | 0.833550 | 4.999886e-56 | -8.615850e-47 |
| Msa1081270 | Msa1165480 | 0.801300 | 9.607967e-49 | -8.615850e-47 |
| Msa1081270 | Msa1169170 | 0.824896 | 6.295956e-54 | -8.615850e-47 |
| Msa1081270 | Msa1169690 | 0.846486 | 2.106991e-59 | -8.615850e-47 |
| Msa1081270 | Msa1191000 | 0.838488 | 2.791427e-57 | -8.615850e-47 |
| Msa1081270 | Msa1201780 | 0.808214 | 3.457199e-50 | -8.615850e-47 |
| Msa1081270 | Msa1206040 | 0.843581 | 1.283177e-58 | -8.615850e-47 |
| Msa1081270 | Msa1215980 | 0.832742 | 7.948030e-56 | -8.615850e-47 |
| Msa1081270 | Msa1215990 | 0.802090 | 6.614684e-49 | -8.615850e-47 |
| Msa1081270 | Msa1226370 | 0.845530 | 3.835409e-59 | -8.615850e-47 |
| Msa1081270 | Msa1240940 | 0.816025 | 6.840312e-52 | -8.615850e-47 |
| Msa1081270 | Msa1244690 | 0.825885 | 3.672088e-54 | -8.615850e-47 |
| Msa1081270 | Msa1254420 | 0.819207 | 1.311107e-52 | -8.615850e-47 |
| Msa1081270 | Msa1266690 | 0.811758 | 5.966065e-51 | -8.615850e-47 |
| Msa1081270 | Msa1267930 | 0.834006 | 3.847214e-56 | -8.615850e-47 |
| Msa1081270 | Msa1282300 | 0.824602 | 7.384514e-54 | -8.615850e-47 |
| Msa1081270 | Msa1294280 | 0.827853 | 1.243345e-54 | -8.615850e-47 |
| Msa1081270 | Msa1294460 | 0.816353 | 5.778699e-52 | -8.615850e-47 |
| Msa1081270 | Msa1294790 | 0.847344 | 1.226882e-59 | -8.615850e-47 |
| Msa1081270 | Msa1297070 | 0.839247 | 1.775807e-57 | -8.615850e-47 |
| Msa1081270 | Msa1301820 | 0.841183 | 5.545646e-58 | -8.615850e-47 |
| Msa1081270 | Msa1301830 | 0.844663 | 6.577915e-59 | -8.615850e-47 |
| Msa1081270 | Msa1305780 | 0.809757 | 1.615720e-50 | -8.615850e-47 |
| Msa1081270 | Msa1315500 | 0.815438 | 9.244574e-52 | -8.615850e-47 |
| Msa1081270 | Msa1328870 | 0.835387 | 1.728497e-56 | -8.615850e-47 |
| Msa1081270 | Msa1332950 | 0.806516 | 7.920750e-50 | -8.615850e-47 |
| Msa1081270 | Msa1333360 | 0.813524 | 2.450183e-51 | -8.615850e-47 |
| Msa1081270 | Msa1339230 | 0.827913 | 1.202909e-54 | -8.615850e-47 |
| Msa1081270 | Msa1361680 | 0.811538 | 6.660852e-51 | -8.615850e-47 |
| Msa1081270 | Msa1365500 | 0.810089 | 1.370960e-50 | -8.615850e-47 |
| Msa1081270 | Msa1371800 | 0.806883 | 6.625629e-50 | -8.615850e-47 |
| Msa1081270 | Msa1372030 | 0.853092 | 3.003419e-61 | -8.615850e-47 |
| Msa1081270 | Msa1376310 | 0.804295 | 2.313858e-49 | -8.615850e-47 |
| Msa1081270 | Msa1381330 | 0.819699 | 1.012541e-52 | -8.615850e-47 |
| Msa1081270 | Msa1381800 | 0.820654 | 6.118093e-53 | -8.615850e-47 |
| Msa1081270 | Msa1382830 | 0.829107 | 6.194639e-55 | -8.615850e-47 |
| Msa1081270 | Msa1387500 | 0.801122 | 1.044898e-48 | -8.615850e-47 |
| Msa1081270 | Msa1389820 | 0.823134 | 1.631449e-53 | -8.615850e-47 |
| Msa1081270 | Msa1390210 | 0.807662 | 4.529660e-50 | -8.615850e-47 |
| Msa1081270 | Msa1393560 | 0.858516 | 7.810897e-63 | -8.615850e-47 |
| Msa1081270 | Msa1399190 | 0.825440 | 4.683185e-54 | -8.615850e-47 |
| Msa1081270 | Msa1413020 | 0.800457 | 1.428611e-48 | -8.615850e-47 |
| Msa1081270 | Msa1424370 | 0.826699 | 2.350775e-54 | -8.615850e-47 |
| Msa1081270 | Msa1426320 | 0.851633 | 7.818302e-61 | -8.615850e-47 |
| Msa1081270 | Msa1431520 | 0.830752 | 2.459707e-55 | -8.615850e-47 |
| Msa1081270 | Msa1432520 | 0.806518 | 7.913649e-50 | -8.615850e-47 |
| Msa1081270 | Msa1434640 | 0.806569 | 7.717903e-50 | -8.615850e-47 |
| Msa1081270 | Msa1435100 | 0.831307 | 1.797526e-55 | -8.615850e-47 |
| Msa1081270 | Msa1439730 | 0.831057 | 2.071182e-55 | -8.615850e-47 |
| Msa1081270 | Msa1442260 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
| Msa1081270 | Msa1457840 | 0.819937 | 8.932587e-53 | -8.615850e-47 |
| Msa1081270 | Msa1461260 | 0.801488 | 8.794611e-49 | -8.615850e-47 |
| Msa0249870 | Msa1081270 | 0.861663 | 8.759887e-64 | -8.615850e-47 |
| Msa0260570 | Msa1081270 | 0.833481 | 5.202361e-56 | -8.615850e-47 |
| Msa0260630 | Msa1081270 | 0.833191 | 6.146206e-56 | -8.615850e-47 |
| Msa0265310 | Msa1081270 | 0.815844 | 7.504971e-52 | -8.615850e-47 |
| Msa0276800 | Msa1081270 | -0.812413 | 4.292916e-51 | -8.615850e-47 |
| Msa0281540 | Msa1081270 | 0.836816 | 7.496079e-57 | -8.615850e-47 |
| Msa0288400 | Msa1081270 | 0.850867 | 1.285823e-60 | -8.615850e-47 |
| Msa0316720 | Msa1081270 | -0.810913 | 9.097265e-51 | -8.615850e-47 |
| Msa0320580 | Msa1081270 | 0.824394 | 8.267846e-54 | -8.615850e-47 |
| Msa0336520 | Msa1081270 | 0.800972 | 1.121522e-48 | -8.615850e-47 |
| Msa0342220 | Msa1081270 | 0.854303 | 1.347016e-61 | -8.615850e-47 |
| Msa0344110 | Msa1081270 | 0.830125 | 3.502800e-55 | -8.615850e-47 |
| Msa0500740 | Msa1081270 | 0.802419 | 5.661060e-49 | -8.615850e-47 |
| Msa0506540 | Msa1081270 | 0.815193 | 1.047769e-51 | -8.615850e-47 |
| Msa0506880 | Msa1081270 | 0.809838 | 1.552792e-50 | -8.615850e-47 |
| Msa0507810 | Msa1081270 | 0.824624 | 7.295518e-54 | -8.615850e-47 |
| Msa0507820 | Msa1081270 | 0.824425 | 8.129050e-54 | -8.615850e-47 |
| Msa0507920 | Msa1081270 | 0.822534 | 2.250664e-53 | -8.615850e-47 |
| Msa0512530 | Msa1081270 | 0.800016 | 1.756272e-48 | -8.615850e-47 |
| Msa0513640 | Msa1081270 | 0.815532 | 8.808750e-52 | -8.615850e-47 |
| Msa0514020 | Msa1081270 | 0.861380 | 1.068944e-63 | -8.615850e-47 |
| Msa0514500 | Msa1081270 | 0.807345 | 5.289279e-50 | -8.615850e-47 |
| Msa0518410 | Msa1081270 | 0.828402 | 9.172708e-55 | -8.615850e-47 |
| Msa0520680 | Msa1081270 | 0.831617 | 1.508094e-55 | -8.615850e-47 |
| Msa0521510 | Msa1081270 | 0.847829 | 9.029452e-60 | -8.615850e-47 |
| Msa0521530 | Msa1081270 | 0.836667 | 8.181900e-57 | -8.615850e-47 |
| Msa0527850 | Msa1081270 | 0.855301 | 6.916564e-62 | -8.615850e-47 |
| Msa0541740 | Msa1081270 | 0.835324 | 1.792732e-56 | -8.615850e-47 |
| Msa0544410 | Msa1081270 | 0.861880 | 7.517221e-64 | -8.615850e-47 |
| Msa0544430 | Msa1081270 | 0.854234 | 1.409620e-61 | -8.615850e-47 |
| Msa0553750 | Msa1081270 | 0.800769 | 1.233572e-48 | -8.615850e-47 |
| Msa0554300 | Msa1081270 | 0.816347 | 5.796488e-52 | -8.615850e-47 |
| Msa0572360 | Msa1081270 | 0.802235 | 6.176497e-49 | -8.615850e-47 |
| Msa0572830 | Msa1081270 | 0.872602 | 2.803653e-67 | -8.615850e-47 |
| Msa0576330 | Msa1081270 | 0.820643 | 6.155351e-53 | -8.615850e-47 |
| Msa0582460 | Msa1081270 | 0.871143 | 8.550481e-67 | -8.615850e-47 |
| Msa0584530 | Msa1081270 | 0.808695 | 2.729138e-50 | -8.615850e-47 |
| Msa0586200 | Msa1081270 | 0.846203 | 2.517355e-59 | -8.615850e-47 |
| Msa0846900 | Msa1081270 | 0.849841 | 2.495153e-60 | -8.615850e-47 |
| Msa0856610 | Msa1081270 | 0.814721 | 1.333486e-51 | -8.615850e-47 |
| Msa0861440 | Msa1081270 | 0.842044 | 3.288611e-58 | -8.615850e-47 |
| Msa0866530 | Msa1081270 | 0.806667 | 7.360865e-50 | -8.615850e-47 |
| Msa0874730 | Msa1081270 | 0.818188 | 2.232804e-52 | -8.615850e-47 |
| Msa0876630 | Msa1081270 | 0.825226 | 5.260751e-54 | -8.615850e-47 |
| Msa0879920 | Msa1081270 | 0.822420 | 2.391833e-53 | -8.615850e-47 |
| Msa0900090 | Msa1081270 | 0.867498 | 1.308985e-65 | -8.615850e-47 |
| Msa0926310 | Msa1081270 | 0.837392 | 5.340815e-57 | -8.615850e-47 |
| Msa0926760 | Msa1081270 | 0.811331 | 7.386391e-51 | -8.615850e-47 |
| Msa0930040 | Msa1081270 | 0.817260 | 3.615754e-52 | -8.615850e-47 |
| Msa0931310 | Msa1081270 | 0.817213 | 3.705042e-52 | -8.615850e-47 |
| Msa0945900 | Msa1081270 | 0.813560 | 2.406326e-51 | -8.615850e-47 |
| Msa0965470 | Msa1081270 | 0.826997 | 1.995019e-54 | -8.615850e-47 |
| Msa0976380 | Msa1081270 | 0.829370 | 5.347371e-55 | -8.615850e-47 |
| Msa0978980 | Msa1081270 | 0.830757 | 2.453605e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081270 | MtrunA17_Chr7g0268191 | 95.172 | 290 | 14 | 0 | 4 | 293 | 36 | 325 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081270 | AT5G06590.1 | 46.372 | 317 | 131 | 8 | 7 | 292 | 5 | 313 | 3.29e-82 | 251 |
| Msa1081270 | AT5G06590.2 | 45.139 | 288 | 119 | 8 | 7 | 263 | 5 | 284 | 8.48e-67 | 211 |
Find 74 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAATGTTGAATGATTT+TGG | 0.158419 | 7_2:+81080440 | Msa1081270:three_prime_UTR |
| TCATCTTCCTCCTCAATTTC+AGG | 0.165758 | 7_2:-81078203 | None:intergenic |
| ATAATATTTATCTTGTTATT+TGG | 0.181203 | 7_2:+81080550 | Msa1081270:three_prime_UTR |
| AGAGGGAGACAAGGGGAATT+TGG | 0.217034 | 7_2:+81079224 | Msa1081270:CDS |
| GATAGTCCCTCTTCTTTCTA+TGG | 0.224713 | 7_2:+81078269 | Msa1081270:CDS |
| GATATTTCTTCATTTGATTT+AGG | 0.238863 | 7_2:+81079938 | Msa1081270:CDS |
| AAAATATGATCCATTCCTTT+TGG | 0.259534 | 7_2:+81080469 | Msa1081270:three_prime_UTR |
| CCCTTGTCTCCCTCTAAATT+AGG | 0.260676 | 7_2:-81079216 | None:intergenic |
| TTACAAGCAGAAAGAATAAT+TGG | 0.276504 | 7_2:-81080517 | None:intergenic |
| GCAGGTTTCGGATGATAAAT+TGG | 0.276771 | 7_2:+81078247 | Msa1081270:CDS |
| AGCAAATATGATCTTGCTTT+AGG | 0.302372 | 7_2:-81080256 | None:intergenic |
| TCGTTGCAGAAGCTTGAAAT+TGG | 0.308277 | 7_2:-81077709 | None:intergenic |
| TCACTCTCAATGGCCGATTC+TGG | 0.318237 | 7_2:+81078293 | Msa1081270:CDS |
| GCTTCTTCAGATTGGGAATT+GGG | 0.324453 | 7_2:-81077662 | None:intergenic |
| TTTATCTTGTTATTTGGTAT+TGG | 0.329694 | 7_2:+81080556 | Msa1081270:three_prime_UTR |
| AGCTGCTATGGCTACGTTCC+AGG | 0.330522 | 7_2:+81078081 | Msa1081270:CDS |
| TTCAAGCTTCTGCAACGAAT+TGG | 0.333099 | 7_2:+81077714 | Msa1081270:CDS |
| TGCTTCTTCAGATTGGGAAT+TGG | 0.343798 | 7_2:-81077663 | None:intergenic |
| GTTGAATTGCTTCTTCAGAT+TGG | 0.365742 | 7_2:-81077670 | None:intergenic |
| TGTACAAGCGCCGCAGGTTT+CGG | 0.382807 | 7_2:+81078235 | Msa1081270:CDS |
| TTGAATTGCTTCTTCAGATT+GGG | 0.391394 | 7_2:-81077669 | None:intergenic |
| CTTTGAGTTTGAAACAGCTT+GGG | 0.420767 | 7_2:+81078741 | Msa1081270:CDS |
| GAACAGAGTACCTAATTTAG+AGG | 0.420798 | 7_2:+81079206 | Msa1081270:intron |
| GAGAGAGTACTGAGAGGAAC+AGG | 0.426975 | 7_2:-81077799 | None:intergenic |
| GGGAATTGGGTTGAACTTTG+CGG | 0.441806 | 7_2:-81077649 | None:intergenic |
| GCTCTTTAATATCTTTAAAG+TGG | 0.442865 | 7_2:-81079268 | None:intergenic |
| TTCCATCGGTCTTCTTGCTT+AGG | 0.444534 | 7_2:-81079895 | None:intergenic |
| ATGAAGAAATATCATCTTGA+CGG | 0.455986 | 7_2:-81079928 | None:intergenic |
| AGGAACAGGTCTGCGATGAA+TGG | 0.463072 | 7_2:-81077785 | None:intergenic |
| GATGAAACTAAACTTAGTCT+TGG | 0.474255 | 7_2:-81080416 | None:intergenic |
| TGATTTAGTTCCTGAAATTG+AGG | 0.477536 | 7_2:+81078193 | Msa1081270:intron |
| TCTTTGAGTTTGAAACAGCT+TGG | 0.478455 | 7_2:+81078740 | Msa1081270:CDS |
| AAGTTGAAACGCGGCGGTTG+AGG | 0.482382 | 7_2:-81077930 | None:intergenic |
| GAACTTCTTGAAGCCAGAAT+CGG | 0.483419 | 7_2:-81078306 | None:intergenic |
| TAATATCTTTAAAGTGGAGC+TGG | 0.492002 | 7_2:-81079262 | None:intergenic |
| CTCTTCAAAGGAAACCGTGC+TGG | 0.493028 | 7_2:-81077986 | None:intergenic |
| TGAATCGAGCAGTTCGAGAT+CGG | 0.501516 | 7_2:-81077959 | None:intergenic |
| TGATGCTAGAGCCTTCATAT+AGG | 0.502322 | 7_2:-81079310 | None:intergenic |
| ATGGTCGTTGAGACAGTTGA+TGG | 0.503531 | 7_2:+81080301 | Msa1081270:CDS |
| TTGGGTTGAACTTTGCGGCT+CGG | 0.504939 | 7_2:-81077644 | None:intergenic |
| AATTACTGAACCTCCCCAAA+AGG | 0.511380 | 7_2:-81080484 | None:intergenic |
| TTGAACAAGAGCGTCGGAAG+AGG | 0.513169 | 7_2:-81077761 | None:intergenic |
| CTGAACCTCCCCAAAAGGAA+TGG | 0.514078 | 7_2:-81080479 | None:intergenic |
| GCTAGAGCCTTCATATAGGC+AGG | 0.529395 | 7_2:-81079306 | None:intergenic |
| TCTAGTGCGCATGAACCGTA+TGG | 0.538349 | 7_2:+81080282 | Msa1081270:CDS |
| TTATGATGTACAAGCGCCGC+AGG | 0.539382 | 7_2:+81078229 | Msa1081270:CDS |
| TCTTGTACAATTCGTTGCAG+TGG | 0.542890 | 7_2:-81078017 | None:intergenic |
| CTAGCTACTTTAGCATCTGA+AGG | 0.547806 | 7_2:+81078779 | Msa1081270:CDS |
| ATGTCTTCCTGCCTATATGA+AGG | 0.553974 | 7_2:+81079299 | Msa1081270:CDS |
| GATCGTCTTAAAAGCTGCTA+TGG | 0.555122 | 7_2:+81078069 | Msa1081270:CDS |
| TTTCTATGGATCACTCTCAA+TGG | 0.556386 | 7_2:+81078283 | Msa1081270:CDS |
| TATGAAGGCTCTAGCATCAT+GGG | 0.556428 | 7_2:+81079314 | Msa1081270:CDS |
| ATATGAAGGCTCTAGCATCA+TGG | 0.557022 | 7_2:+81079313 | Msa1081270:CDS |
| ACGGAAGAAGTTGCTTCCAT+CGG | 0.562648 | 7_2:-81079909 | None:intergenic |
| ATTCTTTCTGCTTGTAACTG+TGG | 0.571245 | 7_2:+81080523 | Msa1081270:three_prime_UTR |
| CAACTGTCTCAACGACCATA+CGG | 0.576988 | 7_2:-81080297 | None:intergenic |
| GTGGCCTAAAAGCTCTTCAA+AGG | 0.578631 | 7_2:-81077998 | None:intergenic |
| AGCCTAAGCAAGAAGACCGA+TGG | 0.582747 | 7_2:+81079893 | Msa1081270:CDS |
| AGTGATCCATAGAAAGAAGA+GGG | 0.586786 | 7_2:-81078275 | None:intergenic |
| CCTAATTTAGAGGGAGACAA+GGG | 0.590428 | 7_2:+81079216 | Msa1081270:CDS |
| ATCTTCGAGTTCGATTAGAT+CGG | 0.595046 | 7_2:-81078049 | None:intergenic |
| ACCTAATTTAGAGGGAGACA+AGG | 0.595373 | 7_2:+81079215 | Msa1081270:CDS |
| AACAGAGTACCTAATTTAGA+GGG | 0.598785 | 7_2:+81079207 | Msa1081270:intron |
| GAGTGATCCATAGAAAGAAG+AGG | 0.611635 | 7_2:-81078276 | None:intergenic |
| AATGGATTGAACAAGAGCGT+CGG | 0.632071 | 7_2:-81077767 | None:intergenic |
| GGCCTTCTAGGATCTACTCG+TGG | 0.641817 | 7_2:+81079850 | Msa1081270:intron |
| TTTAGTTCCTGAAATTGAGG+AGG | 0.651521 | 7_2:+81078196 | Msa1081270:intron |
| GCTCGATTCAATGTCCAGCA+CGG | 0.657391 | 7_2:+81077972 | Msa1081270:CDS |
| GCGGTTGAGGCATTGTACGA+AGG | 0.677592 | 7_2:-81077917 | None:intergenic |
| CACTTGAAGTTGAAACGCGG+CGG | 0.678154 | 7_2:-81077936 | None:intergenic |
| AATTTATCATCCGAAACCTG+CGG | 0.707837 | 7_2:-81078245 | None:intergenic |
| CTAATTTAGAGGGAGACAAG+GGG | 0.710745 | 7_2:+81079217 | Msa1081270:CDS |
| GAAGGCTCTAGCATCATGGG+AGG | 0.711259 | 7_2:+81079317 | Msa1081270:CDS |
| CGGCACTTGAAGTTGAAACG+CGG | 0.714890 | 7_2:-81077939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATATGGATTTTTA+GGG | - | chr7_2:81079650-81079669 | None:intergenic | 10.0% |
| !!! | AATTTTTTATATGGATTTTT+AGG | - | chr7_2:81079651-81079670 | None:intergenic | 10.0% |
| !!! | ATAACTTACAATTTTTTATA+TGG | - | chr7_2:81079660-81079679 | None:intergenic | 10.0% |
| !!! | ATAATATTTATCTTGTTATT+TGG | + | chr7_2:81080550-81080569 | Msa1081270:three_prime_UTR | 10.0% |
| !! | TGAAAAAGTCTTTAAATTTA+AGG | - | chr7_2:81078350-81078369 | None:intergenic | 15.0% |
| !!! | TCATTTTTTCAAATTATAGT+TGG | - | chr7_2:81078569-81078588 | None:intergenic | 15.0% |
| !! | AATTGTAAGTTATATGTAAA+AGG | + | chr7_2:81079667-81079686 | Msa1081270:intron | 15.0% |
| !! | ACACTAAAAACTAAACTTAA+CGG | - | chr7_2:81078127-81078146 | None:intergenic | 20.0% |
| !!! | TTAAAGACTTTTTCATACTT+TGG | + | chr7_2:81078355-81078374 | Msa1081270:intron | 20.0% |
| !! | TTGCAAATAAAAATCACATA+CGG | + | chr7_2:81078470-81078489 | Msa1081270:intron | 20.0% |
| !!! | ATCAATTCTAAAGAGAATAA+AGG | - | chr7_2:81078717-81078736 | None:intergenic | 20.0% |
| !!! | TTTTGTTTACTAGTTTTTGT+GGG | + | chr7_2:81078954-81078973 | Msa1081270:intron | 20.0% |
| !! | ATTATGTGTTTATATACCAA+AGG | + | chr7_2:81079363-81079382 | Msa1081270:intron | 20.0% |
| !! | TTATGTGTTTATATACCAAA+GGG | + | chr7_2:81079364-81079383 | Msa1081270:intron | 20.0% |
| !!! | GATATTTCTTCATTTGATTT+AGG | + | chr7_2:81079938-81079957 | Msa1081270:CDS | 20.0% |
| !! | TTATTAAACTATGCTAAAGA+GGG | - | chr7_2:81080059-81080078 | None:intergenic | 20.0% |
| !! | ATTATTAAACTATGCTAAAG+AGG | - | chr7_2:81080060-81080079 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAATTGCTTCTG+TGG | - | chr7_2:81080154-81080173 | None:intergenic | 20.0% |
| !! | ACGTAAGTTACAAAAAAAAA+GGG | - | chr7_2:81080395-81080414 | None:intergenic | 20.0% |
| !! | AACGTAAGTTACAAAAAAAA+AGG | - | chr7_2:81080396-81080415 | None:intergenic | 20.0% |
| !!! | ATTGAAATGTTGAATGATTT+TGG | + | chr7_2:81080440-81080459 | Msa1081270:three_prime_UTR | 20.0% |
| !!! | TTTATCTTGTTATTTGGTAT+TGG | + | chr7_2:81080556-81080575 | Msa1081270:three_prime_UTR | 20.0% |
| !! | AAGATTTTATCAGACACAAA+GGG | - | chr7_2:81077867-81077886 | None:intergenic | 25.0% |
| !! | AAAGATTTTATCAGACACAA+AGG | - | chr7_2:81077868-81077887 | None:intergenic | 25.0% |
| !! | TATGCATTTTTACAAATACC+TGG | - | chr7_2:81078102-81078121 | None:intergenic | 25.0% |
| !!! | ATGTGTGCATAGATTTTTTT+TGG | + | chr7_2:81078407-81078426 | Msa1081270:intron | 25.0% |
| !!! | TGTGTGCATAGATTTTTTTT+GGG | + | chr7_2:81078408-81078427 | Msa1081270:intron | 25.0% |
| !!! | ATTTTTATTTGCAACTATCC+AGG | - | chr7_2:81078464-81078483 | None:intergenic | 25.0% |
| ! | AACTGTTAAATTACATTGAC+TGG | + | chr7_2:81078655-81078674 | Msa1081270:intron | 25.0% |
| !!! | ATAACATCAATTTTTTCCAC+AGG | + | chr7_2:81078809-81078828 | Msa1081270:intron | 25.0% |
| !!! | TAATGCTTATTTTAGTTGCA+AGG | + | chr7_2:81078861-81078880 | Msa1081270:intron | 25.0% |
| !!! | CTTTTGTTTACTAGTTTTTG+TGG | + | chr7_2:81078953-81078972 | Msa1081270:intron | 25.0% |
| !!! | GAGAAGTAAGTTTAATTTTG+TGG | + | chr7_2:81079105-81079124 | Msa1081270:intron | 25.0% |
| ! | TGGATATAATATACTGTTGA+GGG | + | chr7_2:81079125-81079144 | Msa1081270:intron | 25.0% |
| !! | GCTCTTTAATATCTTTAAAG+TGG | - | chr7_2:81079271-81079290 | None:intergenic | 25.0% |
| ! | ATAATCATGTTGAAAGTTTC+TGG | + | chr7_2:81079719-81079738 | Msa1081270:intron | 25.0% |
| ! | CACACAGAGAAAAAAAAATT+AGG | - | chr7_2:81079826-81079845 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTCTGTGTGATT+TGG | + | chr7_2:81079829-81079848 | Msa1081270:intron | 25.0% |
| ! | ATGAAGAAATATCATCTTGA+CGG | - | chr7_2:81079931-81079950 | None:intergenic | 25.0% |
| !!! | ATCACATTGTTATTTTGCAA+TGG | - | chr7_2:81080010-81080029 | None:intergenic | 25.0% |
| ! | GTAAGTTACAAAAAAAAAGG+GGG | - | chr7_2:81080393-81080412 | None:intergenic | 25.0% |
| ! | CGTAAGTTACAAAAAAAAAG+GGG | - | chr7_2:81080394-81080413 | None:intergenic | 25.0% |
| !! | AAAATATGATCCATTCCTTT+TGG | + | chr7_2:81080469-81080488 | Msa1081270:three_prime_UTR | 25.0% |
| !! | AAATATGATCCATTCCTTTT+GGG | + | chr7_2:81080470-81080489 | Msa1081270:three_prime_UTR | 25.0% |
| ! | TTACAAGCAGAAAGAATAAT+TGG | - | chr7_2:81080520-81080539 | None:intergenic | 25.0% |
| TTGAATTGCTTCTTCAGATT+GGG | - | chr7_2:81077672-81077691 | None:intergenic | 30.0% | |
| ! | TGATTTAGTTCCTGAAATTG+AGG | + | chr7_2:81078193-81078212 | Msa1081270:intron | 30.0% |
| GCACACATTCTAAACATATA+TGG | - | chr7_2:81078395-81078414 | None:intergenic | 30.0% | |
| !! | TTGACTGGTTTGATTGATTA+CGG | + | chr7_2:81078670-81078689 | Msa1081270:intron | 30.0% |
| ! | TTTTCATGGAATCAACAATG+TGG | - | chr7_2:81078986-81079005 | None:intergenic | 30.0% |
| ATGAATTAATCTAAGAAGCC+AGG | - | chr7_2:81079014-81079033 | None:intergenic | 30.0% | |
| AAGAAAGATAGAGGCAAAAA+TGG | - | chr7_2:81079047-81079066 | None:intergenic | 30.0% | |
| ! | GCATTGATAAAGAAAGATAG+AGG | - | chr7_2:81079056-81079075 | None:intergenic | 30.0% |
| GTGGATATAATATACTGTTG+AGG | + | chr7_2:81079124-81079143 | Msa1081270:intron | 30.0% | |
| GGATATAATATACTGTTGAG+GGG | + | chr7_2:81079126-81079145 | Msa1081270:intron | 30.0% | |
| ! | AACAGAGTACCTAATTTAGA+GGG | + | chr7_2:81079207-81079226 | Msa1081270:intron | 30.0% |
| !! | TAATATCTTTAAAGTGGAGC+TGG | - | chr7_2:81079265-81079284 | None:intergenic | 30.0% |
| AGTTCTTCATAACCACATTA+AGG | + | chr7_2:81079392-81079411 | Msa1081270:intron | 30.0% | |
| !! | CAGAAAAACAAGCTCTAAAT+TGG | - | chr7_2:81079436-81079455 | None:intergenic | 30.0% |
| !! | AGAGCTTGTTTTTCTGTTTA+AGG | + | chr7_2:81079440-81079459 | Msa1081270:intron | 30.0% |
| !!! | TTTTAGGGCTGTTTAGTTTA+AGG | - | chr7_2:81079635-81079654 | None:intergenic | 30.0% |
| CATCATGTATCGTATAATGT+GGG | + | chr7_2:81079749-81079768 | Msa1081270:intron | 30.0% | |
| AAAAAAAAACACCCAATTGC+AGG | - | chr7_2:81080091-81080110 | None:intergenic | 30.0% | |
| ATCATGAATAAAACAGTAGG+TGG | - | chr7_2:81080217-81080236 | None:intergenic | 30.0% | |
| AGCAAATATGATCTTGCTTT+AGG | - | chr7_2:81080259-81080278 | None:intergenic | 30.0% | |
| GATGAAACTAAACTTAGTCT+TGG | - | chr7_2:81080419-81080438 | None:intergenic | 30.0% | |
| ! | AATATGATCCATTCCTTTTG+GGG | + | chr7_2:81080471-81080490 | Msa1081270:three_prime_UTR | 30.0% |
| GTTGAATTGCTTCTTCAGAT+TGG | - | chr7_2:81077673-81077692 | None:intergenic | 35.0% | |
| !! | GTTTCCTTTGAAGAGCTTTT+AGG | + | chr7_2:81077994-81078013 | Msa1081270:CDS | 35.0% |
| ! | ATCTTCGAGTTCGATTAGAT+CGG | - | chr7_2:81078052-81078071 | None:intergenic | 35.0% |
| ! | TTTAGTTCCTGAAATTGAGG+AGG | + | chr7_2:81078196-81078215 | Msa1081270:intron | 35.0% |
| AATTTATCATCCGAAACCTG+CGG | - | chr7_2:81078248-81078267 | None:intergenic | 35.0% | |
| AGTGATCCATAGAAAGAAGA+GGG | - | chr7_2:81078278-81078297 | None:intergenic | 35.0% | |
| TTTCTATGGATCACTCTCAA+TGG | + | chr7_2:81078283-81078302 | Msa1081270:CDS | 35.0% | |
| TCATACTTTGGTTGATCTCT+AGG | + | chr7_2:81078367-81078386 | Msa1081270:intron | 35.0% | |
| CTGAATGTAATGTTAAGTCC+TGG | + | chr7_2:81078443-81078462 | Msa1081270:intron | 35.0% | |
| !!! | TATAGCTTTGTAGTTTTCCC+TGG | + | chr7_2:81078604-81078623 | Msa1081270:intron | 35.0% |
| AAGCTATAACACAGTTTCCA+GGG | - | chr7_2:81078624-81078643 | None:intergenic | 35.0% | |
| AAAGCTATAACACAGTTTCC+AGG | - | chr7_2:81078625-81078644 | None:intergenic | 35.0% | |
| TGGAAACTGTGTTATAGCTT+TGG | + | chr7_2:81078624-81078643 | Msa1081270:intron | 35.0% | |
| ! | TCTTTGAGTTTGAAACAGCT+TGG | + | chr7_2:81078740-81078759 | Msa1081270:CDS | 35.0% |
| ! | CTTTGAGTTTGAAACAGCTT+GGG | + | chr7_2:81078741-81078760 | Msa1081270:CDS | 35.0% |
| TCAAAAAACCAAAACCACTG+GGG | - | chr7_2:81078920-81078939 | None:intergenic | 35.0% | |
| GTCAAAAAACCAAAACCACT+GGG | - | chr7_2:81078921-81078940 | None:intergenic | 35.0% | |
| AGTCAAAAAACCAAAACCAC+TGG | - | chr7_2:81078922-81078941 | None:intergenic | 35.0% | |
| CTTTCTTTATCAATGCTTGC+AGG | + | chr7_2:81079060-81079079 | Msa1081270:intron | 35.0% | |
| TCTGTTCACTCATAACTTGA+GGG | - | chr7_2:81079193-81079212 | None:intergenic | 35.0% | |
| ! | GAACAGAGTACCTAATTTAG+AGG | + | chr7_2:81079206-81079225 | Msa1081270:intron | 35.0% |
| !!! | ATGGGAGGTAAGGTTTTTTA+TGG | + | chr7_2:81079332-81079351 | Msa1081270:intron | 35.0% |
| CCAGTTAACTATCCTTAATG+TGG | - | chr7_2:81079407-81079426 | None:intergenic | 35.0% | |
| CCACATTAAGGATAGTTAAC+TGG | + | chr7_2:81079404-81079423 | Msa1081270:intron | 35.0% | |
| GCATCATGTATCGTATAATG+TGG | + | chr7_2:81079748-81079767 | Msa1081270:intron | 35.0% | |
| GTGATGCTTCTTAGATACTT+TGG | + | chr7_2:81079783-81079802 | Msa1081270:intron | 35.0% | |
| AAGATCTGAAGAAGCAAAGA+TGG | - | chr7_2:81079977-81079996 | None:intergenic | 35.0% | |
| ! | TATTTTGCAATGGTCGAATC+AGG | - | chr7_2:81080000-81080019 | None:intergenic | 35.0% |
| TAATCCATATGACCTGCAAT+TGG | + | chr7_2:81080076-81080095 | Msa1081270:intron | 35.0% | |
| AATCCATATGACCTGCAATT+GGG | + | chr7_2:81080077-81080096 | Msa1081270:intron | 35.0% | |
| AAAAAATTGCTTCTGTGGAG+TGG | - | chr7_2:81080149-81080168 | None:intergenic | 35.0% | |
| GGCATCATGAATAAAACAGT+AGG | - | chr7_2:81080220-81080239 | None:intergenic | 35.0% | |
| TTAGGTCCTGAAAAAACAGA+CGG | - | chr7_2:81080241-81080260 | None:intergenic | 35.0% | |
| ! | CAGAAGAAGTCAAACGTTTT+CGG | - | chr7_2:81080365-81080384 | None:intergenic | 35.0% |
| ATTCTTTCTGCTTGTAACTG+TGG | + | chr7_2:81080523-81080542 | Msa1081270:three_prime_UTR | 35.0% | |
| GCTTCTTCAGATTGGGAATT+GGG | - | chr7_2:81077665-81077684 | None:intergenic | 40.0% | |
| TGCTTCTTCAGATTGGGAAT+TGG | - | chr7_2:81077666-81077685 | None:intergenic | 40.0% | |
| TCGTTGCAGAAGCTTGAAAT+TGG | - | chr7_2:81077712-81077731 | None:intergenic | 40.0% | |
| TTCAAGCTTCTGCAACGAAT+TGG | + | chr7_2:81077714-81077733 | Msa1081270:CDS | 40.0% | |
| !! | AATGGATTGAACAAGAGCGT+CGG | - | chr7_2:81077770-81077789 | None:intergenic | 40.0% |
| TCTTGTACAATTCGTTGCAG+TGG | - | chr7_2:81078020-81078039 | None:intergenic | 40.0% | |
| GATCGTCTTAAAAGCTGCTA+TGG | + | chr7_2:81078069-81078088 | Msa1081270:CDS | 40.0% | |
| TCATCTTCCTCCTCAATTTC+AGG | - | chr7_2:81078206-81078225 | None:intergenic | 40.0% | |
| GCAGGTTTCGGATGATAAAT+TGG | + | chr7_2:81078247-81078266 | Msa1081270:CDS | 40.0% | |
| GATAGTCCCTCTTCTTTCTA+TGG | + | chr7_2:81078269-81078288 | Msa1081270:CDS | 40.0% | |
| GAGTGATCCATAGAAAGAAG+AGG | - | chr7_2:81078279-81078298 | None:intergenic | 40.0% | |
| GAACTTCTTGAAGCCAGAAT+CGG | - | chr7_2:81078309-81078328 | None:intergenic | 40.0% | |
| CCAGATGGTAAAATGTTGCA+GGG | + | chr7_2:81078510-81078529 | Msa1081270:intron | 40.0% | |
| GATTACGGTTCTTGAAAAGC+TGG | + | chr7_2:81078685-81078704 | Msa1081270:intron | 40.0% | |
| ! | CTAGCTACTTTAGCATCTGA+AGG | + | chr7_2:81078779-81078798 | Msa1081270:CDS | 40.0% |
| CTTTAGCATCTGAAGGTTAG+TGG | + | chr7_2:81078786-81078805 | Msa1081270:intron | 40.0% | |
| ! | AGGCATGCTTGTTACTTACT+TGG | + | chr7_2:81078829-81078848 | Msa1081270:intron | 40.0% |
| GATTCCATGAAAACTAGACC+TGG | + | chr7_2:81078993-81079012 | Msa1081270:intron | 40.0% | |
| CTGTTCACTCATAACTTGAG+GGG | - | chr7_2:81079192-81079211 | None:intergenic | 40.0% | |
| CTCTGTTCACTCATAACTTG+AGG | - | chr7_2:81079194-81079213 | None:intergenic | 40.0% | |
| ACCTAATTTAGAGGGAGACA+AGG | + | chr7_2:81079215-81079234 | Msa1081270:CDS | 40.0% | |
| CCTAATTTAGAGGGAGACAA+GGG | + | chr7_2:81079216-81079235 | Msa1081270:CDS | 40.0% | |
| CTAATTTAGAGGGAGACAAG+GGG | + | chr7_2:81079217-81079236 | Msa1081270:CDS | 40.0% | |
| ATGTCTTCCTGCCTATATGA+AGG | + | chr7_2:81079299-81079318 | Msa1081270:CDS | 40.0% | |
| TGATGCTAGAGCCTTCATAT+AGG | - | chr7_2:81079313-81079332 | None:intergenic | 40.0% | |
| ! | ATATGAAGGCTCTAGCATCA+TGG | + | chr7_2:81079313-81079332 | Msa1081270:CDS | 40.0% |
| ! | TATGAAGGCTCTAGCATCAT+GGG | + | chr7_2:81079314-81079333 | Msa1081270:CDS | 40.0% |
| ATGAAGAACTAGCATCCCTT+TGG | - | chr7_2:81079382-81079401 | None:intergenic | 40.0% | |
| TGCTAAAGAGGGATCTTGAA+AGG | - | chr7_2:81080048-81080067 | None:intergenic | 40.0% | |
| ATGTGTGAATGGTAAGTTGC+TGG | - | chr7_2:81080122-81080141 | None:intergenic | 40.0% | |
| AAACAGTAGGTGGTAAGTCA+GGG | - | chr7_2:81080207-81080226 | None:intergenic | 40.0% | |
| AAAACAGTAGGTGGTAAGTC+AGG | - | chr7_2:81080208-81080227 | None:intergenic | 40.0% | |
| !!! | ATGATGCCGTCTGTTTTTTC+AGG | + | chr7_2:81080232-81080251 | Msa1081270:intron | 40.0% |
| AATTACTGAACCTCCCCAAA+AGG | - | chr7_2:81080487-81080506 | None:intergenic | 40.0% | |
| !! | GGGAATTGGGTTGAACTTTG+CGG | - | chr7_2:81077652-81077671 | None:intergenic | 45.0% |
| TGAATCGAGCAGTTCGAGAT+CGG | - | chr7_2:81077962-81077981 | None:intergenic | 45.0% | |
| GTGGCCTAAAAGCTCTTCAA+AGG | - | chr7_2:81078001-81078020 | None:intergenic | 45.0% | |
| TTACCATCTGGCTGAACCAA+CGG | - | chr7_2:81078501-81078520 | None:intergenic | 45.0% | |
| GCCAGATGGTAAAATGTTGC+AGG | + | chr7_2:81078509-81078528 | Msa1081270:intron | 45.0% | |
| ! | CCCTGCAACATTTTACCATC+TGG | - | chr7_2:81078513-81078532 | None:intergenic | 45.0% |
| GTAAGTAACAAGCATGCCTG+TGG | - | chr7_2:81078828-81078847 | None:intergenic | 45.0% | |
| ! | CATTGTTCCATTTTCCCCAG+TGG | + | chr7_2:81078903-81078922 | Msa1081270:intron | 45.0% |
| ! | TCCATTTTCCCCAGTGGTTT+TGG | + | chr7_2:81078909-81078928 | Msa1081270:intron | 45.0% |
| ACCAAAACCACTGGGGAAAA+TGG | - | chr7_2:81078913-81078932 | None:intergenic | 45.0% | |
| !!! | GAAGCCAGGTCTAGTTTTCA+TGG | - | chr7_2:81079000-81079019 | None:intergenic | 45.0% |
| CCCTTGTCTCCCTCTAAATT+AGG | - | chr7_2:81079219-81079238 | None:intergenic | 45.0% | |
| ! | TCTGTGTGATTTGGCCTTCT+AGG | + | chr7_2:81079838-81079857 | Msa1081270:intron | 45.0% |
| TTCCATCGGTCTTCTTGCTT+AGG | - | chr7_2:81079898-81079917 | None:intergenic | 45.0% | |
| ACGGAAGAAGTTGCTTCCAT+CGG | - | chr7_2:81079912-81079931 | None:intergenic | 45.0% | |
| ACACCCAATTGCAGGTCATA+TGG | - | chr7_2:81080083-81080102 | None:intergenic | 45.0% | |
| GGAGTGGCTTAATGTGTGAA+TGG | - | chr7_2:81080133-81080152 | None:intergenic | 45.0% | |
| GTAAGTCAGGGCTAGAATTC+AGG | - | chr7_2:81080195-81080214 | None:intergenic | 45.0% | |
| CAACTGTCTCAACGACCATA+CGG | - | chr7_2:81080300-81080319 | None:intergenic | 45.0% | |
| ATGGTCGTTGAGACAGTTGA+TGG | + | chr7_2:81080301-81080320 | Msa1081270:CDS | 45.0% | |
| !! | ATGATCCATTCCTTTTGGGG+AGG | + | chr7_2:81080474-81080493 | Msa1081270:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTAAAATAGTTTA+TGG | + | chr7_2:81080164-81080183 | Msa1081270:intron | 5.0% |
| !!! | TTTTTTTTAAAATAGTTTAT+GGG | + | chr7_2:81080165-81080184 | Msa1081270:intron | 5.0% |
| !! | TTGGGTTGAACTTTGCGGCT+CGG | - | chr7_2:81077647-81077666 | None:intergenic | 50.0% |
| !! | TTGAACAAGAGCGTCGGAAG+AGG | - | chr7_2:81077764-81077783 | None:intergenic | 50.0% |
| AGGAACAGGTCTGCGATGAA+TGG | - | chr7_2:81077788-81077807 | None:intergenic | 50.0% | |
| !! | GAGAGAGTACTGAGAGGAAC+AGG | - | chr7_2:81077802-81077821 | None:intergenic | 50.0% |
| !! | GAGAGAGAGAGAGTACTGAG+AGG | - | chr7_2:81077808-81077827 | None:intergenic | 50.0% |
| CACTTGAAGTTGAAACGCGG+CGG | - | chr7_2:81077939-81077958 | None:intergenic | 50.0% | |
| CGGCACTTGAAGTTGAAACG+CGG | - | chr7_2:81077942-81077961 | None:intergenic | 50.0% | |
| GCTCGATTCAATGTCCAGCA+CGG | + | chr7_2:81077972-81077991 | Msa1081270:CDS | 50.0% | |
| CTCTTCAAAGGAAACCGTGC+TGG | - | chr7_2:81077989-81078008 | None:intergenic | 50.0% | |
| ! | TTATGATGTACAAGCGCCGC+AGG | + | chr7_2:81078229-81078248 | Msa1081270:CDS | 50.0% |
| ! | TCACTCTCAATGGCCGATTC+TGG | + | chr7_2:81078293-81078312 | Msa1081270:CDS | 50.0% |
| ATCACATACGGTAGTCCCGT+TGG | + | chr7_2:81078482-81078501 | Msa1081270:intron | 50.0% | |
| TACCATCTGGCTGAACCAAC+GGG | - | chr7_2:81078500-81078519 | None:intergenic | 50.0% | |
| AGAGGGAGACAAGGGGAATT+TGG | + | chr7_2:81079224-81079243 | Msa1081270:CDS | 50.0% | |
| GCTAGAGCCTTCATATAGGC+AGG | - | chr7_2:81079309-81079328 | None:intergenic | 50.0% | |
| CTCTAGCATCATGGGAGGTA+AGG | + | chr7_2:81079322-81079341 | Msa1081270:intron | 50.0% | |
| AGCCACGAGTAGATCCTAGA+AGG | - | chr7_2:81079855-81079874 | None:intergenic | 50.0% | |
| AGCCTAAGCAAGAAGACCGA+TGG | + | chr7_2:81079893-81079912 | Msa1081270:CDS | 50.0% | |
| TCTAGTGCGCATGAACCGTA+TGG | + | chr7_2:81080282-81080301 | Msa1081270:CDS | 50.0% | |
| CTGAACCTCCCCAAAAGGAA+TGG | - | chr7_2:81080482-81080501 | None:intergenic | 50.0% | |
| !! | GCGGTTGAGGCATTGTACGA+AGG | - | chr7_2:81077920-81077939 | None:intergenic | 55.0% |
| AAGTTGAAACGCGGCGGTTG+AGG | - | chr7_2:81077933-81077952 | None:intergenic | 55.0% | |
| AGCTGCTATGGCTACGTTCC+AGG | + | chr7_2:81078081-81078100 | Msa1081270:CDS | 55.0% | |
| ! | TGTACAAGCGCCGCAGGTTT+CGG | + | chr7_2:81078235-81078254 | Msa1081270:CDS | 55.0% |
| CTTGAGGGGTGAGATCATGC+AGG | - | chr7_2:81079178-81079197 | None:intergenic | 55.0% | |
| ! | GAAGGCTCTAGCATCATGGG+AGG | + | chr7_2:81079317-81079336 | Msa1081270:CDS | 55.0% |
| !! | GGCCTTCTAGGATCTACTCG+TGG | + | chr7_2:81079850-81079869 | Msa1081270:intron | 55.0% |
| !! | GTCCCGTTGGTTCAGCCAGA+TGG | + | chr7_2:81078495-81078514 | Msa1081270:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81077644 | 81080579 | 81077644 | ID=Msa1081270;Name=Msa1081270 |
| chr7_2 | mRNA | 81077644 | 81080579 | 81077644 | ID=Msa1081270-mRNA-1;Parent=Msa1081270;Name=Msa1081270-mRNA-1;_AED=0.06;_eAED=0.06;_QI=50|1|1|1|1|1|8|231|293 |
| chr7_2 | exon | 81077644 | 81077811 | 81077644 | ID=Msa1081270-mRNA-1:exon:20614;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81077902 | 81078102 | 81077902 | ID=Msa1081270-mRNA-1:exon:20615;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81078201 | 81078342 | 81078201 | ID=Msa1081270-mRNA-1:exon:20616;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81078730 | 81078800 | 81078730 | ID=Msa1081270-mRNA-1:exon:20617;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81079082 | 81079109 | 81079082 | ID=Msa1081270-mRNA-1:exon:20618;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81079212 | 81079338 | 81079212 | ID=Msa1081270-mRNA-1:exon:20619;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81079860 | 81079959 | 81079860 | ID=Msa1081270-mRNA-1:exon:20620;Parent=Msa1081270-mRNA-1 |
| chr7_2 | exon | 81080254 | 81080579 | 81080254 | ID=Msa1081270-mRNA-1:exon:20621;Parent=Msa1081270-mRNA-1 |
| chr7_2 | five_prime_UTR | 81077644 | 81077693 | 81077644 | ID=Msa1081270-mRNA-1:five_prime_utr;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81077694 | 81077811 | 81077694 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81077902 | 81078102 | 81077902 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81078201 | 81078342 | 81078201 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81078730 | 81078800 | 81078730 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81079082 | 81079109 | 81079082 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81079212 | 81079338 | 81079212 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81079860 | 81079959 | 81079860 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | CDS | 81080254 | 81080348 | 81080254 | ID=Msa1081270-mRNA-1:cds;Parent=Msa1081270-mRNA-1 |
| chr7_2 | three_prime_UTR | 81080349 | 81080579 | 81080349 | ID=Msa1081270-mRNA-1:three_prime_utr;Parent=Msa1081270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
