Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21182.t1 | XP_003591385.1 | 87.6 | 267 | 26 | 2 | 1 | 267 | 1 | 260 | 4.80E-131 | 477.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21182.t1 | Q7XA78 | 35.6 | 205 | 114 | 6 | 52 | 246 | 58 | 254 | 4.5e-29 | 129.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21182.t1 | G7ICW5 | 87.6 | 267 | 26 | 2 | 1 | 267 | 1 | 260 | 3.5e-131 | 477.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21182 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene049171 | MS.gene21182 | 0.844244 | 8.52E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene21182 | 0.856564 | 2.95E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene21182 | 0.820137 | 8.04E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene21182 | 0.815494 | 8.98E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene21182 | 0.886658 | 2.82E-72 | -1.69E-46 |
| MS.gene049633 | MS.gene21182 | 0.822293 | 2.56E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene21182 | 0.842506 | 2.48E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene21182 | 0.847538 | 1.09E-59 | -1.69E-46 |
| MS.gene050315 | MS.gene21182 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene21182 | 0.809237 | 2.09E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene21182 | 0.813603 | 2.35E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene21182 | 0.8317 | 1.44E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene21182 | 0.840719 | 7.34E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene21182 | 0.826051 | 3.35E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene21182 | 0.825829 | 3.79E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene21182 | 0.835563 | 1.56E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene21182 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene21182 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene21182 | 0.888143 | 7.67E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene21182 | 0.854251 | 1.39E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene21182 | 0.860709 | 1.71E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene21182 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene21182 | 0.838026 | 3.67E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene21182 | 0.840898 | 6.59E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene21182 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene21182 | 0.885717 | 6.39E-72 | -1.69E-46 |
| MS.gene050986 | MS.gene21182 | 0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene21182 | 0.847248 | 1.30E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene21182 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene051438 | MS.gene21182 | 0.820765 | 5.77E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene21182 | 0.803777 | 2.96E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene21182 | 0.800603 | 1.33E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene21182 | 0.835082 | 2.06E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene21182 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene21182 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene21182 | 0.873129 | 1.87E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene21182 | 0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene21182 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene21182 | 0.808046 | 3.75E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene21182 | 0.874299 | 7.53E-68 | -1.69E-46 |
| MS.gene052346 | MS.gene21182 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene21182 | -0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene21182 | 0.825385 | 4.82E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene21182 | 0.835496 | 1.62E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene21182 | 0.836111 | 1.13E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene21182 | 0.844226 | 8.62E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene21182 | 0.840033 | 1.11E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene21182 | 0.861595 | 9.19E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene21182 | 0.844174 | 8.90E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene21182 | 0.844537 | 7.11E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene21182 | 0.832035 | 1.19E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene21182 | 0.873239 | 1.71E-67 | -1.69E-46 |
| MS.gene053203 | MS.gene21182 | 0.859327 | 4.46E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene21182 | 0.84836 | 6.44E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene21182 | 0.839886 | 1.21E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene21182 | 0.837684 | 4.49E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene21182 | 0.827097 | 1.89E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene21182 | 0.80994 | 1.48E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene21182 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene21182 | 0.879571 | 1.12E-69 | -1.69E-46 |
| MS.gene053579 | MS.gene21182 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene21182 | 0.863927 | 1.75E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene21182 | 0.834288 | 3.27E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene21182 | 0.867341 | 1.47E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene21182 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene054003 | MS.gene21182 | 0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene21182 | 0.860573 | 1.88E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene21182 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene21182 | 0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene21182 | 0.809155 | 2.18E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene21182 | 0.851091 | 1.11E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene21182 | 0.878403 | 2.89E-69 | -1.69E-46 |
| MS.gene05494 | MS.gene21182 | 0.831308 | 1.80E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene21182 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene21182 | 0.83591 | 1.27E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene21182 | 0.836001 | 1.21E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene21182 | 0.820981 | 5.15E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene21182 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene21182 | 0.833422 | 5.38E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene21182 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene055577 | MS.gene21182 | 0.882139 | 1.34E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene21182 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene21182 | 0.855632 | 5.54E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene21182 | 0.851489 | 8.59E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene21182 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene21182 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene21182 | 0.838705 | 2.45E-57 | -1.69E-46 |
| MS.gene055909 | MS.gene21182 | 0.80129 | 9.65E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene21182 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene21182 | 0.825975 | 3.50E-54 | -1.69E-46 |
| MS.gene056040 | MS.gene21182 | 0.855251 | 7.15E-62 | -1.69E-46 |
| MS.gene056083 | MS.gene21182 | 0.811336 | 7.37E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene21182 | 0.856509 | 3.07E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene21182 | 0.827505 | 1.51E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene21182 | 0.816328 | 5.85E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene21182 | 0.809823 | 1.56E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene21182 | 0.806969 | 6.35E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene21182 | 0.810417 | 1.16E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene21182 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene056782 | MS.gene21182 | 0.815319 | 9.83E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene21182 | 0.816721 | 4.78E-52 | -1.69E-46 |
| MS.gene057019 | MS.gene21182 | 0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene21182 | 0.845749 | 3.34E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene21182 | 0.838359 | 3.01E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene21182 | 0.829752 | 4.32E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene21182 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene21182 | 0.859027 | 5.49E-63 | -1.69E-46 |
| MS.gene057734 | MS.gene21182 | 0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene21182 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene21182 | 0.801296 | 9.63E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene21182 | 0.827518 | 1.50E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene21182 | 0.819171 | 1.34E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene21182 | 0.879675 | 1.03E-69 | -1.69E-46 |
| MS.gene058157 | MS.gene21182 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene21182 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene21182 | 0.818198 | 2.22E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene21182 | 0.886078 | 4.68E-72 | -1.69E-46 |
| MS.gene058419 | MS.gene21182 | 0.826924 | 2.08E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene21182 | 0.827363 | 1.63E-54 | -1.69E-46 |
| MS.gene058448 | MS.gene21182 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene21182 | 0.84378 | 1.14E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene21182 | 0.838012 | 3.70E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene21182 | 0.815027 | 1.14E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene21182 | 0.818044 | 2.41E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene21182 | 0.863513 | 2.36E-64 | -1.69E-46 |
| MS.gene05883 | MS.gene21182 | 0.806853 | 6.72E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene21182 | 0.836711 | 7.97E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene21182 | 0.827169 | 1.82E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene21182 | 0.872949 | 2.15E-67 | -1.69E-46 |
| MS.gene05914 | MS.gene21182 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene21182 | 0.82067 | 6.07E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene21182 | 0.815566 | 8.66E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene21182 | 0.861957 | 7.12E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene21182 | 0.825735 | 3.99E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene21182 | 0.873587 | 1.31E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene21182 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene21182 | 0.802176 | 6.35E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene21182 | 0.826298 | 2.93E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene21182 | 0.808487 | 3.02E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene21182 | 0.836191 | 1.08E-56 | -1.69E-46 |
| MS.gene060372 | MS.gene21182 | 0.828416 | 9.10E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene21182 | 0.804096 | 2.55E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene21182 | -0.803329 | 3.67E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene21182 | 0.837592 | 4.75E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene21182 | 0.832003 | 1.21E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene21182 | 0.84597 | 2.91E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene21182 | 0.848372 | 6.39E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene21182 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene21182 | 0.874648 | 5.73E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene21182 | 0.824279 | 8.80E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene21182 | 0.828307 | 9.67E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21182.t1 | MTR_1g086840 | 92.884 | 267 | 12 | 2 | 1 | 267 | 1 | 260 | 0.0 | 504 |
| MS.gene21182.t1 | MTR_1g086840 | 82.969 | 229 | 29 | 4 | 1 | 228 | 1 | 220 | 5.84e-131 | 370 |
| MS.gene21182.t1 | MTR_7g095920 | 36.364 | 198 | 119 | 4 | 50 | 246 | 46 | 237 | 2.48e-37 | 132 |
| MS.gene21182.t1 | MTR_1g471050 | 36.082 | 194 | 117 | 4 | 54 | 246 | 53 | 240 | 3.55e-35 | 127 |
| MS.gene21182.t1 | MTR_3g080840 | 32.906 | 234 | 128 | 7 | 49 | 266 | 43 | 263 | 1.05e-34 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21182.t1 | AT4G01995 | 63.559 | 236 | 76 | 2 | 21 | 256 | 27 | 252 | 2.73e-101 | 296 |
| MS.gene21182.t1 | AT4G01995 | 68.900 | 209 | 63 | 1 | 48 | 256 | 15 | 221 | 3.39e-100 | 292 |
| MS.gene21182.t1 | AT4G01995 | 58.065 | 155 | 57 | 1 | 21 | 175 | 27 | 173 | 5.41e-52 | 168 |
| MS.gene21182.t1 | AT1G64680 | 36.098 | 205 | 110 | 6 | 51 | 243 | 36 | 231 | 4.70e-39 | 137 |
| MS.gene21182.t1 | AT1G03055 | 35.071 | 211 | 119 | 6 | 46 | 246 | 52 | 254 | 4.67e-36 | 129 |
| MS.gene21182.t1 | AT1G64680 | 34.463 | 177 | 95 | 6 | 51 | 215 | 36 | 203 | 3.29e-28 | 107 |
Find 82 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTCACACCTGTGTTTC+TGG | 0.163795 | 1.2:-65272608 | None:intergenic |
| ATTCCAACGCTTTGTTCTAA+TGG | 0.234706 | 1.2:+65270209 | MS.gene21182:CDS |
| GCAGAAGATGCAAACCGTTT+TGG | 0.270080 | 1.2:-65270294 | None:intergenic |
| CAATTTGTTTCGCACCAAAT+TGG | 0.279978 | 1.2:+65270440 | MS.gene21182:CDS |
| TTTGTTTCCTCCATTCCTTT+TGG | 0.289746 | 1.2:+65271585 | MS.gene21182:CDS |
| GAAAATTACCGTAGCTTCTA+TGG | 0.292895 | 1.2:-65270674 | None:intergenic |
| TTAGGTTACCTGAACCAATT+TGG | 0.303056 | 1.2:-65270454 | None:intergenic |
| TTCAGGACGGTGTCATCTTC+AGG | 0.308272 | 1.2:-65272535 | None:intergenic |
| GACCTTCTTCAAGGATCATA+TGG | 0.328100 | 1.2:+65272348 | MS.gene21182:intron |
| TTAAATTTGCAGTTCAAATT+CGG | 0.342169 | 1.2:+65272496 | MS.gene21182:intron |
| AACCTGTGTTGGAAACTTAC+AGG | 0.345038 | 1.2:-65272030 | None:intergenic |
| GTCTACAGAATTGACTTTGC+AGG | 0.348660 | 1.2:-65271822 | None:intergenic |
| GTTTCGCACCAAATTGGTTC+AGG | 0.358197 | 1.2:+65270446 | MS.gene21182:CDS |
| TCTTCTTCTTCATCTTCATC+AGG | 0.361445 | 1.2:+65270269 | MS.gene21182:CDS |
| TTAGAACAAAGCGTTGGAAT+TGG | 0.365725 | 1.2:-65270206 | None:intergenic |
| TGTCGAAAGATGCAAGTATC+TGG | 0.367315 | 1.2:+65271974 | MS.gene21182:CDS |
| AAATGCTTCCCTACGAAGAT+TGG | 0.373694 | 1.2:+65272582 | MS.gene21182:CDS |
| CTTCCAAGCAAGGCTCCTTC+AGG | 0.383691 | 1.2:-65272552 | None:intergenic |
| TTAAATTTAGACCTTCTTCA+AGG | 0.416665 | 1.2:+65272339 | MS.gene21182:intron |
| GCAACTTTGCCTCCACCTAT+AGG | 0.420034 | 1.2:-65271631 | None:intergenic |
| ACAGCTATAATCAGCAAAGT+TGG | 0.429629 | 1.2:-65272392 | None:intergenic |
| TCAAAGAGTGAATACAAGCC+TGG | 0.439154 | 1.2:+65270396 | MS.gene21182:CDS |
| AGGCAAAGTTGCCGCTATAA+TGG | 0.445748 | 1.2:+65271642 | MS.gene21182:CDS |
| AATCTTCGTAGGGAAGCATT+TGG | 0.450960 | 1.2:-65272580 | None:intergenic |
| CTTTGCTGATTATAGCTGTC+AGG | 0.455452 | 1.2:+65272396 | MS.gene21182:CDS |
| CGTCCTGAAGGAGCCTTGCT+TGG | 0.459856 | 1.2:+65272549 | MS.gene21182:CDS |
| TCAATTAGTCCGTCATATCC+AGG | 0.477685 | 1.2:-65270607 | None:intergenic |
| AAAATGCTCATAGCTCCTAT+AGG | 0.484909 | 1.2:+65271616 | MS.gene21182:CDS |
| GATGGAACCTCATGGAATAG+TGG | 0.485415 | 1.2:+65271851 | MS.gene21182:CDS |
| TTACTGCACTTACTTGTCAA+TGG | 0.489234 | 1.2:+65271789 | MS.gene21182:CDS |
| ACCTTCTTCAAGGATCATAT+GGG | 0.499420 | 1.2:+65272349 | MS.gene21182:CDS |
| CAGCTATAATCAGCAAAGTT+GGG | 0.500940 | 1.2:-65272391 | None:intergenic |
| CGGTGTCATCTTCAGGAAGT+GGG | 0.502536 | 1.2:-65272528 | None:intergenic |
| TACCGTAGCTTCTATGGTAT+CGG | 0.506593 | 1.2:-65270668 | None:intergenic |
| ATCTTCATCAGGACCCAAAA+CGG | 0.508312 | 1.2:+65270280 | MS.gene21182:CDS |
| ATGGAACCTCATGGAATAGT+GGG | 0.508469 | 1.2:+65271852 | MS.gene21182:CDS |
| GGATGGGACTCGAAGAAACC+TGG | 0.509195 | 1.2:+65270589 | MS.gene21182:CDS |
| CAAAGAGTGAATACAAGCCT+GGG | 0.509583 | 1.2:+65270397 | MS.gene21182:CDS |
| ACGGTGTCATCTTCAGGAAG+TGG | 0.512090 | 1.2:-65272529 | None:intergenic |
| TTTGGACATGCTTCCAAGCA+AGG | 0.516931 | 1.2:-65272562 | None:intergenic |
| AAGGCGCTAAGTATTGTTGT+TGG | 0.517773 | 1.2:+65270176 | MS.gene21182:CDS |
| ATATGTTCATGTCTTTGGGC+AGG | 0.520060 | 1.2:-65272629 | None:intergenic |
| GAAGAATCACTAACCTGTGT+TGG | 0.521242 | 1.2:-65272041 | None:intergenic |
| ACTTACTTGTCAATGGCTCA+TGG | 0.525178 | 1.2:+65271796 | MS.gene21182:CDS |
| TCTACAGAATTGACTTTGCA+GGG | 0.526670 | 1.2:-65271821 | None:intergenic |
| GCGCTAAGTATTGTTGTTGG+CGG | 0.530949 | 1.2:+65270179 | MS.gene21182:CDS |
| CTTACTTGTCAATGGCTCAT+GGG | 0.539633 | 1.2:+65271797 | MS.gene21182:CDS |
| CTCCGATACCATAGAAGCTA+CGG | 0.540098 | 1.2:+65270666 | MS.gene21182:CDS |
| TATGGGAGTTCCATTACTCA+TGG | 0.540166 | 1.2:+65272366 | MS.gene21182:CDS |
| TACTATAACAGGAAGTGGGA+TGG | 0.548952 | 1.2:+65270572 | MS.gene21182:intron |
| TTATAGAGCTCCAAAAGGAA+TGG | 0.549533 | 1.2:-65271595 | None:intergenic |
| ATTTGGTGCGAAACAAATTG+AGG | 0.552877 | 1.2:-65270437 | None:intergenic |
| TCCCATATGATCCTTGAAGA+AGG | 0.562632 | 1.2:-65272350 | None:intergenic |
| CTCATAGCTCCTATAGGTGG+AGG | 0.565279 | 1.2:+65271622 | MS.gene21182:CDS |
| TAGTGCCTTTCATCATTAGA+CGG | 0.569097 | 1.2:-65270639 | None:intergenic |
| ATTCCATTAGAACAAAGCGT+TGG | 0.570606 | 1.2:-65270212 | None:intergenic |
| AAAATACTATAACAGGAAGT+GGG | 0.571265 | 1.2:+65270568 | MS.gene21182:intron |
| AAGTTGGGCTCCATGAGTAA+TGG | 0.572536 | 1.2:-65272376 | None:intergenic |
| TCGAAGAAACCTGGATATGA+CGG | 0.573061 | 1.2:+65270598 | MS.gene21182:CDS |
| ACTATAACAGGAAGTGGGAT+GGG | 0.573427 | 1.2:+65270573 | MS.gene21182:intron |
| TGAAGATGACACCGTCCTGA+AGG | 0.575565 | 1.2:+65272537 | MS.gene21182:CDS |
| TCTGGAAGCCAATCTTCGTA+GGG | 0.579827 | 1.2:-65272590 | None:intergenic |
| ACCTATCAGATGGAACCTCA+TGG | 0.586052 | 1.2:+65271843 | MS.gene21182:CDS |
| AACAAATCATCAATAACCCC+AGG | 0.586570 | 1.2:-65270414 | None:intergenic |
| TCCATGAGGTTCCATCTGAT+AGG | 0.590896 | 1.2:-65271844 | None:intergenic |
| CACCTGTAAGTTTCCAACAC+AGG | 0.597620 | 1.2:+65272028 | MS.gene21182:CDS |
| TTCTGGAAGCCAATCTTCGT+AGG | 0.598210 | 1.2:-65272591 | None:intergenic |
| AAAGTTGCCGCTATAATGGT+TGG | 0.601706 | 1.2:+65271646 | MS.gene21182:CDS |
| CTGGAGGAAAGCAAGTGTGT+TGG | 0.610904 | 1.2:+65271993 | MS.gene21182:CDS |
| AATTCTGTAGACCTATCAGA+TGG | 0.614406 | 1.2:+65271833 | MS.gene21182:CDS |
| TAGAGCTCCAAAAGGAATGG+AGG | 0.615600 | 1.2:-65271592 | None:intergenic |
| GCTAACCGTCTAATGATGAA+AGG | 0.626704 | 1.2:+65270634 | MS.gene21182:CDS |
| ATGCTCATAGCTCCTATAGG+TGG | 0.633669 | 1.2:+65271619 | MS.gene21182:CDS |
| CGAAAGATGCAAGTATCTGG+AGG | 0.640761 | 1.2:+65271977 | MS.gene21182:CDS |
| GGTGTCATCTTCAGGAAGTG+GGG | 0.642463 | 1.2:-65272527 | None:intergenic |
| CAAGCAAGGCTCCTTCAGGA+CGG | 0.652728 | 1.2:-65272548 | None:intergenic |
| GTGTCATCTTCAGGAAGTGG+GGG | 0.656581 | 1.2:-65272526 | None:intergenic |
| AGATTGGCTTCCAGAAACAC+AGG | 0.677702 | 1.2:+65272598 | MS.gene21182:CDS |
| AGACTCACCAACCATTATAG+CGG | 0.701172 | 1.2:-65271653 | None:intergenic |
| TGGAACCTCATGGAATAGTG+GGG | 0.705163 | 1.2:+65271853 | MS.gene21182:CDS |
| AAAGAGTGAATACAAGCCTG+GGG | 0.716715 | 1.2:+65270398 | MS.gene21182:CDS |
| GATCACCCCACTATTCCATG+AGG | 0.750720 | 1.2:-65271858 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTAAATAAATGTTTA+AGG | - | chr1.2:65271759-65271778 | None:intergenic | 10.0% |
| !! | ATATATGAATATGATTAATG+TGG | + | chr1.2:65270529-65270548 | MS.gene21182:intron | 15.0% |
| !! | AAAGCTATAAATAAGTTAAC+TGG | - | chr1.2:65270489-65270508 | None:intergenic | 20.0% |
| !! | AAATATTACGTATTCTCTTA+TGG | + | chr1.2:65272423-65272442 | MS.gene21182:intron | 20.0% |
| !! | AAATCCTAAGATGATAAAAA+TGG | + | chr1.2:65271118-65271137 | MS.gene21182:intron | 20.0% |
| !! | AAGTTTAGAAGAATCATATA+AGG | - | chr1.2:65271496-65271515 | None:intergenic | 20.0% |
| !! | AGATTATCAAACTGTTTATA+AGG | + | chr1.2:65270883-65270902 | MS.gene21182:intron | 20.0% |
| !! | ATTTGAACTGCAAATTTAAA+AGG | - | chr1.2:65272495-65272514 | None:intergenic | 20.0% |
| !! | GAATAAGTAACATTGTATTA+CGG | - | chr1.2:65271398-65271417 | None:intergenic | 20.0% |
| !! | TATAAATAAGTTAACTGGAA+GGG | - | chr1.2:65270484-65270503 | None:intergenic | 20.0% |
| !! | TATGTACTATAAAATGTTGT+AGG | + | chr1.2:65271947-65271966 | MS.gene21182:intron | 20.0% |
| !! | TTAAATTTGCAGTTCAAATT+CGG | + | chr1.2:65272496-65272515 | MS.gene21182:intron | 20.0% |
| !!! | AGATAAGAATTTGATGTTTT+TGG | + | chr1.2:65271180-65271199 | MS.gene21182:intron | 20.0% |
| !!! | ATAAGAATTTGATGTTTTTG+GGG | + | chr1.2:65271182-65271201 | MS.gene21182:intron | 20.0% |
| !!! | GATAAGAATTTGATGTTTTT+GGG | + | chr1.2:65271181-65271200 | MS.gene21182:intron | 20.0% |
| !!! | GTTTTGATTGAATTTGAATT+AGG | + | chr1.2:65270356-65270375 | MS.gene21182:intron | 20.0% |
| !!! | TAATACAATGTTACTTATTC+TGG | + | chr1.2:65271398-65271417 | MS.gene21182:intron | 20.0% |
| !!! | TTATTTAAGTTTTGAAGCAA+GGG | + | chr1.2:65271766-65271785 | MS.gene21182:intron | 20.0% |
| !!! | TTTATTTAAGTTTTGAAGCA+AGG | + | chr1.2:65271765-65271784 | MS.gene21182:intron | 20.0% |
| !!! | TTTTAGAAAGAAAGAAAAGA+GGG | + | chr1.2:65270506-65270525 | MS.gene21182:intron | 20.0% |
| ! | AAAATACTATAACAGGAAGT+GGG | + | chr1.2:65270568-65270587 | MS.gene21182:intron | 25.0% |
| ! | ATAAATAAGTTAACTGGAAG+GGG | - | chr1.2:65270483-65270502 | None:intergenic | 25.0% |
| ! | ATACTAACATGAAAAAACCA+AGG | - | chr1.2:65272251-65272270 | None:intergenic | 25.0% |
| ! | CTATAAATAAGTTAACTGGA+AGG | - | chr1.2:65270485-65270504 | None:intergenic | 25.0% |
| ! | GAGTATGAAAATACTATAAC+AGG | + | chr1.2:65270561-65270580 | MS.gene21182:intron | 25.0% |
| ! | GAGTTCAAATTTATATGATG+AGG | + | chr1.2:65272445-65272464 | MS.gene21182:intron | 25.0% |
| ! | TACTAACATGAAAAAACCAA+GGG | - | chr1.2:65272250-65272269 | None:intergenic | 25.0% |
| ! | TAGTTATCTTTGCGAAAAAA+TGG | + | chr1.2:65271297-65271316 | MS.gene21182:intron | 25.0% |
| ! | TATGAATATGATTAATGTGG+TGG | + | chr1.2:65270532-65270551 | MS.gene21182:intron | 25.0% |
| ! | TCATCTTGTATTATTGAAAG+TGG | + | chr1.2:65271922-65271941 | MS.gene21182:intron | 25.0% |
| ! | TGATTCTTCTAAACTTTGAA+TGG | + | chr1.2:65271500-65271519 | MS.gene21182:intron | 25.0% |
| ! | TGATTGAATTTGAATTAGGT+GGG | + | chr1.2:65270360-65270379 | MS.gene21182:intron | 25.0% |
| ! | TTAAATTTAGACCTTCTTCA+AGG | + | chr1.2:65272339-65272358 | MS.gene21182:intron | 25.0% |
| ! | TTGATTGAATTTGAATTAGG+TGG | + | chr1.2:65270359-65270378 | MS.gene21182:intron | 25.0% |
| !! | TAAATTTTGTGTGACTGTTT+AGG | + | chr1.2:65270845-65270864 | MS.gene21182:intron | 25.0% |
| !!! | ATATAAACCTTTTGAAACCA+TGG | - | chr1.2:65270767-65270786 | None:intergenic | 25.0% |
| !!! | CTTTTAGAAAGAAAGAAAAG+AGG | + | chr1.2:65270505-65270524 | MS.gene21182:intron | 25.0% |
| !!! | GTTTCCATTTTTATCATCTT+AGG | - | chr1.2:65271125-65271144 | None:intergenic | 25.0% |
| !!! | TTTGAAGTTGTTGCATTTTA+TGG | + | chr1.2:65272295-65272314 | MS.gene21182:intron | 25.0% |
| AATATGATTAATGTGGTGGT+TGG | + | chr1.2:65270536-65270555 | MS.gene21182:intron | 30.0% | |
| AGCTTTACTTTCTCTTTCTA+AGG | - | chr1.2:65271074-65271093 | None:intergenic | 30.0% | |
| GAAAATACTATAACAGGAAG+TGG | + | chr1.2:65270567-65270586 | MS.gene21182:intron | 30.0% | |
| TCAGTTAAAGACAAATCGTT+TGG | - | chr1.2:65272202-65272221 | None:intergenic | 30.0% | |
| ! | AAGTTGTTGCATTTTATGGA+TGG | + | chr1.2:65272299-65272318 | MS.gene21182:intron | 30.0% |
| ! | GAAAGAGAAAGTAAAGCTTT+TGG | + | chr1.2:65271076-65271095 | MS.gene21182:intron | 30.0% |
| !! | TGAAGTGGATTGGAATAAAA+CGG | - | chr1.2:65271346-65271365 | None:intergenic | 30.0% |
| AAAATGCTCATAGCTCCTAT+AGG | + | chr1.2:65271616-65271635 | MS.gene21182:CDS | 35.0% | |
| AAATGCAACAACTTCAAAGC+TGG | - | chr1.2:65272293-65272312 | None:intergenic | 35.0% | |
| AACAAATCATCAATAACCCC+AGG | - | chr1.2:65270417-65270436 | None:intergenic | 35.0% | |
| AACTCTCAAAACCAAAATGG+TGG | - | chr1.2:65271225-65271244 | None:intergenic | 35.0% | |
| AATTCTGTAGACCTATCAGA+TGG | + | chr1.2:65271833-65271852 | MS.gene21182:CDS | 35.0% | |
| ACAGCTATAATCAGCAAAGT+TGG | - | chr1.2:65272395-65272414 | None:intergenic | 35.0% | |
| ACATGAAAAAACCAAGGGAT+CGG | - | chr1.2:65272245-65272264 | None:intergenic | 35.0% | |
| ACATTGTATTACGGTATGTC+TGG | - | chr1.2:65271389-65271408 | None:intergenic | 35.0% | |
| ACCAAAACCATGGTTTCAAA+AGG | + | chr1.2:65270757-65270776 | MS.gene21182:intron | 35.0% | |
| ACCTTCTTCAAGGATCATAT+GGG | + | chr1.2:65272349-65272368 | MS.gene21182:CDS | 35.0% | |
| ATTCCATTAGAACAAAGCGT+TGG | - | chr1.2:65270215-65270234 | None:intergenic | 35.0% | |
| CAGCTATAATCAGCAAAGTT+GGG | - | chr1.2:65272394-65272413 | None:intergenic | 35.0% | |
| CCAAACTCTCAAAACCAAAA+TGG | - | chr1.2:65271228-65271247 | None:intergenic | 35.0% | |
| GAAAATTACCGTAGCTTCTA+TGG | - | chr1.2:65270677-65270696 | None:intergenic | 35.0% | |
| GGTATAGATCAGGTATGTTT+GGG | + | chr1.2:65271246-65271265 | MS.gene21182:intron | 35.0% | |
| TAGAGTTGAATGAAGTGGAT+TGG | - | chr1.2:65271356-65271375 | None:intergenic | 35.0% | |
| TAGTGCCTTTCATCATTAGA+CGG | - | chr1.2:65270642-65270661 | None:intergenic | 35.0% | |
| TCATAATAAGCACTTGTGAG+CGG | + | chr1.2:65271027-65271046 | MS.gene21182:intron | 35.0% | |
| TCTTCTTCTTCATCTTCATC+AGG | + | chr1.2:65270269-65270288 | MS.gene21182:CDS | 35.0% | |
| TGGTATAGAGTTGAATGAAG+TGG | - | chr1.2:65271361-65271380 | None:intergenic | 35.0% | |
| TGGTATAGATCAGGTATGTT+TGG | + | chr1.2:65271245-65271264 | MS.gene21182:intron | 35.0% | |
| TTACTGCACTTACTTGTCAA+TGG | + | chr1.2:65271789-65271808 | MS.gene21182:CDS | 35.0% | |
| TTAGGTTACCTGAACCAATT+TGG | - | chr1.2:65270457-65270476 | None:intergenic | 35.0% | |
| TTATAGAGCTCCAAAAGGAA+TGG | - | chr1.2:65271598-65271617 | None:intergenic | 35.0% | |
| TTCCTTACAAACCAAAACCA+TGG | + | chr1.2:65270747-65270766 | MS.gene21182:intron | 35.0% | |
| TTGAGAGTTTGGTATAGATC+AGG | + | chr1.2:65271236-65271255 | MS.gene21182:intron | 35.0% | |
| TTTCAGTCAGGATTTGAACT+CGG | + | chr1.2:65272170-65272189 | MS.gene21182:intron | 35.0% | |
| ! | ATTCCAACGCTTTGTTCTAA+TGG | + | chr1.2:65270209-65270228 | MS.gene21182:CDS | 35.0% |
| ! | CAATTTGTTTCGCACCAAAT+TGG | + | chr1.2:65270440-65270459 | MS.gene21182:CDS | 35.0% |
| ! | GCATTTTATAGAGCTCCAAA+AGG | - | chr1.2:65271603-65271622 | None:intergenic | 35.0% |
| ! | TAGCACTTATGTCTTGTTAC+AGG | + | chr1.2:65271546-65271565 | MS.gene21182:intron | 35.0% |
| ! | TCTACAGAATTGACTTTGCA+GGG | - | chr1.2:65271824-65271843 | None:intergenic | 35.0% |
| ! | TGTTACAGGTACGAATTTTG+AGG | + | chr1.2:65271560-65271579 | MS.gene21182:intron | 35.0% |
| ! | TTTGTTTCCTCCATTCCTTT+TGG | + | chr1.2:65271585-65271604 | MS.gene21182:CDS | 35.0% |
| !! | AGCTGTTTTCATAAGCTATC+TGG | - | chr1.2:65270936-65270955 | None:intergenic | 35.0% |
| !! | ATTTGGTGCGAAACAAATTG+AGG | - | chr1.2:65270440-65270459 | None:intergenic | 35.0% |
| !! | TTAGAACAAAGCGTTGGAAT+TGG | - | chr1.2:65270209-65270228 | None:intergenic | 35.0% |
| !!! | AACCATGGTTTTGGTTTGTA+AGG | - | chr1.2:65270752-65270771 | None:intergenic | 35.0% |
| !!! | ACCTTTTGAAACCATGGTTT+TGG | - | chr1.2:65270761-65270780 | None:intergenic | 35.0% |
| !!! | CCATTTTGGTTTTGAGAGTT+TGG | + | chr1.2:65271225-65271244 | MS.gene21182:intron | 35.0% |
| !!! | GAATTTGATGTTTTTGGGGA+TGG | + | chr1.2:65271186-65271205 | MS.gene21182:intron | 35.0% |
| AAAGAGTGAATACAAGCCTG+GGG | + | chr1.2:65270398-65270417 | MS.gene21182:CDS | 40.0% | |
| AAAGTTGCCGCTATAATGGT+TGG | + | chr1.2:65271646-65271665 | MS.gene21182:CDS | 40.0% | |
| AAATGCTTCCCTACGAAGAT+TGG | + | chr1.2:65272582-65272601 | MS.gene21182:CDS | 40.0% | |
| AACCTGTGTTGGAAACTTAC+AGG | - | chr1.2:65272033-65272052 | None:intergenic | 40.0% | |
| ACTATAACAGGAAGTGGGAT+GGG | + | chr1.2:65270573-65270592 | MS.gene21182:intron | 40.0% | |
| ACTTACTTGTCAATGGCTCA+TGG | + | chr1.2:65271796-65271815 | MS.gene21182:CDS | 40.0% | |
| AGACTCACCAACCATTATAG+CGG | - | chr1.2:65271656-65271675 | None:intergenic | 40.0% | |
| AGTCATAAACACACAGCGAA+AGG | - | chr1.2:65271891-65271910 | None:intergenic | 40.0% | |
| ATCCTGACTGAAACAATCAC+TGG | - | chr1.2:65272163-65272182 | None:intergenic | 40.0% | |
| ATCTTCATCAGGACCCAAAA+CGG | + | chr1.2:65270280-65270299 | MS.gene21182:CDS | 40.0% | |
| ATGGAACCTCATGGAATAGT+GGG | + | chr1.2:65271852-65271871 | MS.gene21182:CDS | 40.0% | |
| CAAAGAGTGAATACAAGCCT+GGG | + | chr1.2:65270397-65270416 | MS.gene21182:CDS | 40.0% | |
| CTTACTTGTCAATGGCTCAT+GGG | + | chr1.2:65271797-65271816 | MS.gene21182:CDS | 40.0% | |
| GAAGAATCACTAACCTGTGT+TGG | - | chr1.2:65272044-65272063 | None:intergenic | 40.0% | |
| GACCGAGGGTAACAAAATTA+TGG | + | chr1.2:65272137-65272156 | MS.gene21182:intron | 40.0% | |
| GACCTTCTTCAAGGATCATA+TGG | + | chr1.2:65272348-65272367 | MS.gene21182:intron | 40.0% | |
| GCTAACCGTCTAATGATGAA+AGG | + | chr1.2:65270634-65270653 | MS.gene21182:CDS | 40.0% | |
| GGTGTATGTGTATCCAAACA+GGG | + | chr1.2:65271048-65271067 | MS.gene21182:intron | 40.0% | |
| TACCGTAGCTTCTATGGTAT+CGG | - | chr1.2:65270671-65270690 | None:intergenic | 40.0% | |
| TACTATAACAGGAAGTGGGA+TGG | + | chr1.2:65270572-65270591 | MS.gene21182:intron | 40.0% | |
| TAGATCAGGTATGTTTGGGT+TGG | + | chr1.2:65271250-65271269 | MS.gene21182:intron | 40.0% | |
| TATGGGAGTTCCATTACTCA+TGG | + | chr1.2:65272366-65272385 | MS.gene21182:CDS | 40.0% | |
| TCAAAGAGTGAATACAAGCC+TGG | + | chr1.2:65270396-65270415 | MS.gene21182:CDS | 40.0% | |
| TCAATTAGTCCGTCATATCC+AGG | - | chr1.2:65270610-65270629 | None:intergenic | 40.0% | |
| TCCCATATGATCCTTGAAGA+AGG | - | chr1.2:65272353-65272372 | None:intergenic | 40.0% | |
| TCGAAGAAACCTGGATATGA+CGG | + | chr1.2:65270598-65270617 | MS.gene21182:CDS | 40.0% | |
| TGTCGAAAGATGCAAGTATC+TGG | + | chr1.2:65271974-65271993 | MS.gene21182:CDS | 40.0% | |
| ! | AAGGCGCTAAGTATTGTTGT+TGG | + | chr1.2:65270176-65270195 | MS.gene21182:CDS | 40.0% |
| ! | AAGTGCTAACAAACTTGCTC+TGG | - | chr1.2:65271534-65271553 | None:intergenic | 40.0% |
| ! | CAGAAGATGCAAACCGTTTT+GGG | - | chr1.2:65270296-65270315 | None:intergenic | 40.0% |
| ! | CTTTGCTGATTATAGCTGTC+AGG | + | chr1.2:65272396-65272415 | MS.gene21182:CDS | 40.0% |
| ! | GATATCTAGAGTTTGACCGA+GGG | + | chr1.2:65272123-65272142 | MS.gene21182:intron | 40.0% |
| ! | GGCCATAATTTTGTTACCCT+CGG | - | chr1.2:65272142-65272161 | None:intergenic | 40.0% |
| ! | GTCTACAGAATTGACTTTGC+AGG | - | chr1.2:65271825-65271844 | None:intergenic | 40.0% |
| ! | TTACGGTATGTCTGGAATTG+TGG | - | chr1.2:65271381-65271400 | None:intergenic | 40.0% |
| !! | AATCTTCGTAGGGAAGCATT+TGG | - | chr1.2:65272583-65272602 | None:intergenic | 40.0% |
| !! | TCACTAGCTTGTTACGTTCA+GGG | - | chr1.2:65271722-65271741 | None:intergenic | 40.0% |
| !!! | TTGATGTTTTTGGGGATGGA+TGG | + | chr1.2:65271190-65271209 | MS.gene21182:intron | 40.0% |
| AACATTTGAGTCCGATCCCT+TGG | + | chr1.2:65272231-65272250 | MS.gene21182:intron | 45.0% | |
| AAGTTGGGCTCCATGAGTAA+TGG | - | chr1.2:65272379-65272398 | None:intergenic | 45.0% | |
| ACCTATCAGATGGAACCTCA+TGG | + | chr1.2:65271843-65271862 | MS.gene21182:CDS | 45.0% | |
| AGGCAAAGTTGCCGCTATAA+TGG | + | chr1.2:65271642-65271661 | MS.gene21182:CDS | 45.0% | |
| ATATCCCTTCCCATGAGAAC+TGG | - | chr1.2:65272108-65272127 | None:intergenic | 45.0% | |
| ATGCTCATAGCTCCTATAGG+TGG | + | chr1.2:65271619-65271638 | MS.gene21182:CDS | 45.0% | |
| CACCTGTAAGTTTCCAACAC+AGG | + | chr1.2:65272028-65272047 | MS.gene21182:CDS | 45.0% | |
| CGAAAGATGCAAGTATCTGG+AGG | + | chr1.2:65271977-65271996 | MS.gene21182:CDS | 45.0% | |
| CGGTGTATGTGTATCCAAAC+AGG | + | chr1.2:65271047-65271066 | MS.gene21182:intron | 45.0% | |
| CTCCGATACCATAGAAGCTA+CGG | + | chr1.2:65270666-65270685 | MS.gene21182:CDS | 45.0% | |
| GATGGAACCTCATGGAATAG+TGG | + | chr1.2:65271851-65271870 | MS.gene21182:CDS | 45.0% | |
| TAGAGCTCCAAAAGGAATGG+AGG | - | chr1.2:65271595-65271614 | None:intergenic | 45.0% | |
| TCCATGAGGTTCCATCTGAT+AGG | - | chr1.2:65271847-65271866 | None:intergenic | 45.0% | |
| TCTGGAAGCCAATCTTCGTA+GGG | - | chr1.2:65272593-65272612 | None:intergenic | 45.0% | |
| TGGAACCTCATGGAATAGTG+GGG | + | chr1.2:65271853-65271872 | MS.gene21182:CDS | 45.0% | |
| TTTGGACATGCTTCCAAGCA+AGG | - | chr1.2:65272565-65272584 | None:intergenic | 45.0% | |
| ! | GCAGAAGATGCAAACCGTTT+TGG | - | chr1.2:65270297-65270316 | None:intergenic | 45.0% |
| ! | GCGCTAAGTATTGTTGTTGG+CGG | + | chr1.2:65270179-65270198 | MS.gene21182:CDS | 45.0% |
| ! | GGATATCTAGAGTTTGACCG+AGG | + | chr1.2:65272122-65272141 | MS.gene21182:intron | 45.0% |
| ! | GGCAAAGATCTCCACCATTT+TGG | + | chr1.2:65271211-65271230 | MS.gene21182:intron | 45.0% |
| ! | GTTTCGCACCAAATTGGTTC+AGG | + | chr1.2:65270446-65270465 | MS.gene21182:CDS | 45.0% |
| ! | TTCTGGAAGCCAATCTTCGT+AGG | - | chr1.2:65272594-65272613 | None:intergenic | 45.0% |
| !! | AGATTGGCTTCCAGAAACAC+AGG | + | chr1.2:65272598-65272617 | MS.gene21182:CDS | 45.0% |
| !! | ATCAGGTATGTTTGGGTTGG+TGG | + | chr1.2:65271253-65271272 | MS.gene21182:intron | 45.0% |
| !! | CACTAGCTTGTTACGTTCAG+GGG | - | chr1.2:65271721-65271740 | None:intergenic | 45.0% |
| !! | CTCACTAGCTTGTTACGTTC+AGG | - | chr1.2:65271723-65271742 | None:intergenic | 45.0% |
| !! | TCTCTTTCTAAGGCCCTGTT+TGG | - | chr1.2:65271064-65271083 | None:intergenic | 45.0% |
| CTCATAGCTCCTATAGGTGG+AGG | + | chr1.2:65271622-65271641 | MS.gene21182:CDS | 50.0% | |
| CTGGAGGAAAGCAAGTGTGT+TGG | + | chr1.2:65271993-65272012 | MS.gene21182:CDS | 50.0% | |
| CTTAAGCCGCCAGTTCTCAT+GGG | + | chr1.2:65272096-65272115 | MS.gene21182:intron | 50.0% | |
| GATCACCCCACTATTCCATG+AGG | - | chr1.2:65271861-65271880 | None:intergenic | 50.0% | |
| GCAACTTTGCCTCCACCTAT+AGG | - | chr1.2:65271634-65271653 | None:intergenic | 50.0% | |
| GGCCAGTGATTGTTTCAGTC+AGG | + | chr1.2:65272158-65272177 | MS.gene21182:intron | 50.0% | |
| GTGTCATCTTCAGGAAGTGG+GGG | - | chr1.2:65272529-65272548 | None:intergenic | 50.0% | |
| GTTAACTGGAAGGGGCTGTT+AGG | - | chr1.2:65270475-65270494 | None:intergenic | 50.0% | |
| TCTTAAGCCGCCAGTTCTCA+TGG | + | chr1.2:65272095-65272114 | MS.gene21182:intron | 50.0% | |
| TGAAGATGACACCGTCCTGA+AGG | + | chr1.2:65272537-65272556 | MS.gene21182:CDS | 50.0% | |
| ! | GGTGTCATCTTCAGGAAGTG+GGG | - | chr1.2:65272530-65272549 | None:intergenic | 50.0% |
| !! | ACGGTGTCATCTTCAGGAAG+TGG | - | chr1.2:65272532-65272551 | None:intergenic | 50.0% |
| !! | CGGTGTCATCTTCAGGAAGT+GGG | - | chr1.2:65272531-65272550 | None:intergenic | 50.0% |
| !! | TTCAGGACGGTGTCATCTTC+AGG | - | chr1.2:65272538-65272557 | None:intergenic | 50.0% |
| CAAGCAAGGCTCCTTCAGGA+CGG | - | chr1.2:65272551-65272570 | None:intergenic | 55.0% | |
| CTTCCAAGCAAGGCTCCTTC+AGG | - | chr1.2:65272555-65272574 | None:intergenic | 55.0% | |
| GGATGGGACTCGAAGAAACC+TGG | + | chr1.2:65270589-65270608 | MS.gene21182:CDS | 55.0% | |
| GGCAGTCACACCTGTGTTTC+TGG | - | chr1.2:65272611-65272630 | None:intergenic | 55.0% | |
| TCCCTTCCCATGAGAACTGG+CGG | - | chr1.2:65272105-65272124 | None:intergenic | 55.0% | |
| !! | GGTTGGTGGCTAGAGTGGAA+TGG | + | chr1.2:65271267-65271286 | MS.gene21182:intron | 55.0% |
| !! | GTTTGGGTTGGTGGCTAGAG+TGG | + | chr1.2:65271262-65271281 | MS.gene21182:intron | 55.0% |
| AGCCGCCAGTTCTCATGGGA+AGG | + | chr1.2:65272100-65272119 | MS.gene21182:intron | 60.0% | |
| CGTCCTGAAGGAGCCTTGCT+TGG | + | chr1.2:65272549-65272568 | MS.gene21182:CDS | 60.0% | |
| GCCGCCAGTTCTCATGGGAA+GGG | + | chr1.2:65272101-65272120 | MS.gene21182:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 65270173 | 65272645 | 65270173 | ID=MS.gene21182 |
| chr1.2 | mRNA | 65270173 | 65272645 | 65270173 | ID=MS.gene21182.t1;Parent=MS.gene21182 |
| chr1.2 | exon | 65270173 | 65270301 | 65270173 | ID=MS.gene21182.t1.exon1;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65270173 | 65270301 | 65270173 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65270378 | 65270467 | 65270378 | ID=MS.gene21182.t1.exon2;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65270378 | 65270467 | 65270378 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65270583 | 65270687 | 65270583 | ID=MS.gene21182.t1.exon3;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65270583 | 65270687 | 65270583 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65271568 | 65271667 | 65271568 | ID=MS.gene21182.t1.exon4;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65271568 | 65271667 | 65271568 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65271783 | 65271874 | 65271783 | ID=MS.gene21182.t1.exon5;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65271783 | 65271874 | 65271783 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65271969 | 65272049 | 65271969 | ID=MS.gene21182.t1.exon6;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65271969 | 65272049 | 65271969 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65272349 | 65272417 | 65272349 | ID=MS.gene21182.t1.exon7;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65272349 | 65272417 | 65272349 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| chr1.2 | exon | 65272508 | 65272645 | 65272508 | ID=MS.gene21182.t1.exon8;Parent=MS.gene21182.t1 |
| chr1.2 | CDS | 65272508 | 65272645 | 65272508 | ID=cds.MS.gene21182.t1;Parent=MS.gene21182.t1 |
| Gene Sequence |
| Protein sequence |
