Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68738.t1 | AEN94095.1 | 100 | 439 | 0 | 0 | 2 | 440 | 33 | 471 | 9.10E-252 | 879 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68738.t1 | P45621 | 91.8 | 440 | 35 | 1 | 1 | 440 | 28 | 466 | 1.0e-235 | 817.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68738.t1 | G4W9I6 | 100.0 | 439 | 0 | 0 | 2 | 440 | 33 | 471 | 6.5e-252 | 879.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene68738 | 0.854458 | 1.21E-61 | -1.69E-46 |
MS.gene049173 | MS.gene68738 | 0.840133 | 1.04E-57 | -1.69E-46 |
MS.gene049217 | MS.gene68738 | 0.8679 | 9.73E-66 | -1.69E-46 |
MS.gene049222 | MS.gene68738 | 0.85864 | 7.17E-63 | -1.69E-46 |
MS.gene049232 | MS.gene68738 | 0.803758 | 2.99E-49 | -1.69E-46 |
MS.gene049285 | MS.gene68738 | 0.90937 | 6.14E-82 | -1.69E-46 |
MS.gene049320 | MS.gene68738 | 0.883889 | 3.06E-71 | -1.69E-46 |
MS.gene04939 | MS.gene68738 | 0.808306 | 3.31E-50 | -1.69E-46 |
MS.gene049427 | MS.gene68738 | 0.838452 | 2.85E-57 | -1.69E-46 |
MS.gene049609 | MS.gene68738 | 0.803611 | 3.21E-49 | -1.69E-46 |
MS.gene049614 | MS.gene68738 | 0.818769 | 1.65E-52 | -1.69E-46 |
MS.gene049627 | MS.gene68738 | 0.897736 | 1.05E-76 | -1.69E-46 |
MS.gene049633 | MS.gene68738 | 0.806172 | 9.36E-50 | -1.69E-46 |
MS.gene049805 | MS.gene68738 | 0.805229 | 1.48E-49 | -1.69E-46 |
MS.gene05010 | MS.gene68738 | 0.8226 | 2.17E-53 | -1.69E-46 |
MS.gene050163 | MS.gene68738 | 0.928147 | 4.35E-92 | -1.69E-46 |
MS.gene050165 | MS.gene68738 | 0.928119 | 4.53E-92 | -1.69E-46 |
MS.gene050333 | MS.gene68738 | 0.926803 | 2.84E-91 | -1.69E-46 |
MS.gene050444 | MS.gene68738 | 0.811142 | 8.12E-51 | -1.69E-46 |
MS.gene050504 | MS.gene68738 | 0.88407 | 2.62E-71 | -1.69E-46 |
MS.gene050518 | MS.gene68738 | 0.892194 | 1.99E-74 | -1.69E-46 |
MS.gene050577 | MS.gene68738 | 0.844733 | 6.30E-59 | -1.69E-46 |
MS.gene050612 | MS.gene68738 | 0.87584 | 2.24E-68 | -1.69E-46 |
MS.gene050675 | MS.gene68738 | 0.845745 | 3.35E-59 | -1.69E-46 |
MS.gene050699 | MS.gene68738 | 0.864879 | 8.85E-65 | -1.69E-46 |
MS.gene050747 | MS.gene68738 | 0.811701 | 6.14E-51 | -1.69E-46 |
MS.gene050767 | MS.gene68738 | 0.836932 | 7.00E-57 | -1.69E-46 |
MS.gene050770 | MS.gene68738 | 0.839027 | 2.02E-57 | -1.69E-46 |
MS.gene050772 | MS.gene68738 | 0.854282 | 1.37E-61 | -1.69E-46 |
MS.gene050781 | MS.gene68738 | 0.812904 | 3.35E-51 | -1.69E-46 |
MS.gene050876 | MS.gene68738 | 0.865425 | 5.96E-65 | -1.69E-46 |
MS.gene05087 | MS.gene68738 | 0.879978 | 8.01E-70 | -1.69E-46 |
MS.gene050904 | MS.gene68738 | 0.828468 | 8.84E-55 | -1.69E-46 |
MS.gene050950 | MS.gene68738 | 0.814969 | 1.17E-51 | -1.69E-46 |
MS.gene050986 | MS.gene68738 | 0.874489 | 6.49E-68 | -1.69E-46 |
MS.gene05100 | MS.gene68738 | 0.898517 | 4.91E-77 | -1.69E-46 |
MS.gene051228 | MS.gene68738 | 0.816473 | 5.43E-52 | -1.69E-46 |
MS.gene051317 | MS.gene68738 | 0.839159 | 1.87E-57 | -1.69E-46 |
MS.gene051434 | MS.gene68738 | 0.810444 | 1.15E-50 | -1.69E-46 |
MS.gene051551 | MS.gene68738 | 0.827619 | 1.42E-54 | -1.69E-46 |
MS.gene051694 | MS.gene68738 | 0.832839 | 7.52E-56 | -1.69E-46 |
MS.gene051810 | MS.gene68738 | 0.872067 | 4.23E-67 | -1.69E-46 |
MS.gene051858 | MS.gene68738 | 0.818736 | 1.68E-52 | -1.69E-46 |
MS.gene051949 | MS.gene68738 | 0.852015 | 6.09E-61 | -1.69E-46 |
MS.gene052271 | MS.gene68738 | 0.865436 | 5.91E-65 | -1.69E-46 |
MS.gene052379 | MS.gene68738 | 0.849479 | 3.15E-60 | -1.69E-46 |
MS.gene052482 | MS.gene68738 | 0.831323 | 1.78E-55 | -1.69E-46 |
MS.gene052486 | MS.gene68738 | 0.846658 | 1.89E-59 | -1.69E-46 |
MS.gene052605 | MS.gene68738 | 0.802521 | 5.39E-49 | -1.69E-46 |
MS.gene052615 | MS.gene68738 | 0.801928 | 7.14E-49 | -1.69E-46 |
MS.gene052670 | MS.gene68738 | 0.837509 | 4.98E-57 | -1.69E-46 |
MS.gene052872 | MS.gene68738 | 0.800023 | 1.75E-48 | -1.69E-46 |
MS.gene052916 | MS.gene68738 | 0.82414 | 9.49E-54 | -1.69E-46 |
MS.gene053203 | MS.gene68738 | 0.803537 | 3.32E-49 | -1.69E-46 |
MS.gene053207 | MS.gene68738 | 0.809178 | 2.15E-50 | -1.69E-46 |
MS.gene053213 | MS.gene68738 | 0.872846 | 2.32E-67 | -1.69E-46 |
MS.gene053284 | MS.gene68738 | 0.804798 | 1.82E-49 | -1.69E-46 |
MS.gene053285 | MS.gene68738 | 0.802109 | 6.56E-49 | -1.69E-46 |
MS.gene053286 | MS.gene68738 | 0.872532 | 2.96E-67 | -1.69E-46 |
MS.gene053322 | MS.gene68738 | 0.849911 | 2.39E-60 | -1.69E-46 |
MS.gene053574 | MS.gene68738 | 0.809453 | 1.88E-50 | -1.69E-46 |
MS.gene053632 | MS.gene68738 | 0.824422 | 8.14E-54 | -1.69E-46 |
MS.gene054374 | MS.gene68738 | 0.841943 | 3.50E-58 | -1.69E-46 |
MS.gene054376 | MS.gene68738 | 0.807408 | 5.13E-50 | -1.69E-46 |
MS.gene054408 | MS.gene68738 | 0.81576 | 7.84E-52 | -1.69E-46 |
MS.gene054595 | MS.gene68738 | 0.803818 | 2.91E-49 | -1.69E-46 |
MS.gene054600 | MS.gene68738 | 0.84823 | 7.00E-60 | -1.69E-46 |
MS.gene054638 | MS.gene68738 | 0.821415 | 4.09E-53 | -1.69E-46 |
MS.gene054642 | MS.gene68738 | 0.895997 | 5.63E-76 | -1.69E-46 |
MS.gene05470 | MS.gene68738 | 0.815924 | 7.20E-52 | -1.69E-46 |
MS.gene054802 | MS.gene68738 | 0.830166 | 3.42E-55 | -1.69E-46 |
MS.gene054803 | MS.gene68738 | 0.83088 | 2.29E-55 | -1.69E-46 |
MS.gene054804 | MS.gene68738 | 0.833094 | 6.50E-56 | -1.69E-46 |
MS.gene054954 | MS.gene68738 | 0.886101 | 4.58E-72 | -1.69E-46 |
MS.gene055206 | MS.gene68738 | 0.802018 | 6.85E-49 | -1.69E-46 |
MS.gene055333 | MS.gene68738 | -0.814624 | 1.40E-51 | -1.69E-46 |
MS.gene055362 | MS.gene68738 | 0.887212 | 1.74E-72 | -1.69E-46 |
MS.gene055397 | MS.gene68738 | 0.857422 | 1.65E-62 | -1.69E-46 |
MS.gene055499 | MS.gene68738 | 0.856343 | 3.43E-62 | -1.69E-46 |
MS.gene055502 | MS.gene68738 | 0.865164 | 7.20E-65 | -1.69E-46 |
MS.gene055577 | MS.gene68738 | 0.820994 | 5.11E-53 | -1.69E-46 |
MS.gene055634 | MS.gene68738 | 0.876151 | 1.75E-68 | -1.69E-46 |
MS.gene055636 | MS.gene68738 | 0.868828 | 4.89E-66 | -1.69E-46 |
MS.gene055638 | MS.gene68738 | 0.883155 | 5.70E-71 | -1.69E-46 |
MS.gene055647 | MS.gene68738 | 0.844766 | 6.17E-59 | -1.69E-46 |
MS.gene055722 | MS.gene68738 | 0.820898 | 5.38E-53 | -1.69E-46 |
MS.gene055748 | MS.gene68738 | 0.841453 | 4.71E-58 | -1.69E-46 |
MS.gene055750 | MS.gene68738 | 0.832849 | 7.48E-56 | -1.69E-46 |
MS.gene055751 | MS.gene68738 | 0.848671 | 5.28E-60 | -1.69E-46 |
MS.gene055941 | MS.gene68738 | 0.815457 | 9.15E-52 | -1.69E-46 |
MS.gene055956 | MS.gene68738 | -0.802008 | 6.88E-49 | -1.69E-46 |
MS.gene056083 | MS.gene68738 | 0.837201 | 5.98E-57 | -1.69E-46 |
MS.gene056374 | MS.gene68738 | 0.866273 | 3.22E-65 | -1.69E-46 |
MS.gene056409 | MS.gene68738 | 0.825141 | 5.51E-54 | -1.69E-46 |
MS.gene056449 | MS.gene68738 | 0.835769 | 1.38E-56 | -1.69E-46 |
MS.gene056450 | MS.gene68738 | 0.826093 | 3.28E-54 | -1.69E-46 |
MS.gene056504 | MS.gene68738 | 0.823184 | 1.59E-53 | -1.69E-46 |
MS.gene056510 | MS.gene68738 | 0.850369 | 1.78E-60 | -1.69E-46 |
MS.gene056549 | MS.gene68738 | 0.873593 | 1.30E-67 | -1.69E-46 |
MS.gene056610 | MS.gene68738 | 0.805351 | 1.39E-49 | -1.69E-46 |
MS.gene056657 | MS.gene68738 | 0.898569 | 4.66E-77 | -1.69E-46 |
MS.gene056692 | MS.gene68738 | 0.890755 | 7.40E-74 | -1.69E-46 |
MS.gene056898 | MS.gene68738 | 0.829229 | 5.79E-55 | -1.69E-46 |
MS.gene057011 | MS.gene68738 | 0.827721 | 1.34E-54 | -1.69E-46 |
MS.gene057129 | MS.gene68738 | 0.860732 | 1.68E-63 | -1.69E-46 |
MS.gene057246 | MS.gene68738 | 0.800268 | 1.56E-48 | -1.69E-46 |
MS.gene057331 | MS.gene68738 | 0.809942 | 1.47E-50 | -1.69E-46 |
MS.gene057416 | MS.gene68738 | 0.849628 | 2.86E-60 | -1.69E-46 |
MS.gene057831 | MS.gene68738 | 0.855064 | 8.10E-62 | -1.69E-46 |
MS.gene058019 | MS.gene68738 | 0.81696 | 4.22E-52 | -1.69E-46 |
MS.gene058323 | MS.gene68738 | 0.816078 | 6.66E-52 | -1.69E-46 |
MS.gene058335 | MS.gene68738 | 0.806892 | 6.60E-50 | -1.69E-46 |
MS.gene058419 | MS.gene68738 | 0.887856 | 9.88E-73 | -1.69E-46 |
MS.gene058544 | MS.gene68738 | 0.836204 | 1.07E-56 | -1.69E-46 |
MS.gene058719 | MS.gene68738 | 0.854864 | 9.26E-62 | -1.69E-46 |
MS.gene058723 | MS.gene68738 | 0.824595 | 7.41E-54 | -1.69E-46 |
MS.gene058773 | MS.gene68738 | 0.869787 | 2.38E-66 | -1.69E-46 |
MS.gene05883 | MS.gene68738 | 0.817534 | 3.14E-52 | -1.69E-46 |
MS.gene059022 | MS.gene68738 | 0.88233 | 1.14E-70 | -1.69E-46 |
MS.gene059023 | MS.gene68738 | 0.838128 | 3.46E-57 | -1.69E-46 |
MS.gene059029 | MS.gene68738 | 0.875193 | 3.74E-68 | -1.69E-46 |
MS.gene059079 | MS.gene68738 | 0.846079 | 2.72E-59 | -1.69E-46 |
MS.gene05912 | MS.gene68738 | 0.837352 | 5.47E-57 | -1.69E-46 |
MS.gene05934 | MS.gene68738 | 0.81957 | 1.08E-52 | -1.69E-46 |
MS.gene059479 | MS.gene68738 | -0.822824 | 1.93E-53 | -1.69E-46 |
MS.gene059536 | MS.gene68738 | 0.810072 | 1.38E-50 | -1.69E-46 |
MS.gene059677 | MS.gene68738 | 0.902271 | 1.15E-78 | -1.69E-46 |
MS.gene059718 | MS.gene68738 | 0.866084 | 3.69E-65 | -1.69E-46 |
MS.gene059756 | MS.gene68738 | 0.864555 | 1.12E-64 | -1.69E-46 |
MS.gene059794 | MS.gene68738 | 0.806172 | 9.36E-50 | -1.69E-46 |
MS.gene059801 | MS.gene68738 | 0.824208 | 9.14E-54 | -1.69E-46 |
MS.gene059858 | MS.gene68738 | 0.814275 | 1.67E-51 | -1.69E-46 |
MS.gene059865 | MS.gene68738 | 0.828727 | 7.65E-55 | -1.69E-46 |
MS.gene059902 | MS.gene68738 | 0.814537 | 1.46E-51 | -1.69E-46 |
MS.gene059960 | MS.gene68738 | 0.875644 | 2.62E-68 | -1.69E-46 |
MS.gene060193 | MS.gene68738 | 0.807506 | 4.89E-50 | -1.69E-46 |
MS.gene060703 | MS.gene68738 | 0.853902 | 1.76E-61 | -1.69E-46 |
MS.gene060762 | MS.gene68738 | 0.866783 | 2.21E-65 | -1.69E-46 |
MS.gene06077 | MS.gene68738 | 0.871417 | 6.94E-67 | -1.69E-46 |
MS.gene06092 | MS.gene68738 | 0.826394 | 2.78E-54 | -1.69E-46 |
MS.gene060982 | MS.gene68738 | 0.81052 | 1.11E-50 | -1.69E-46 |
MS.gene061134 | MS.gene68738 | 0.835292 | 1.83E-56 | -1.69E-46 |
MS.gene061150 | MS.gene68738 | 0.903063 | 5.10E-79 | -1.69E-46 |
MS.gene061171 | MS.gene68738 | 0.887837 | 1.00E-72 | -1.69E-46 |
MS.gene061200 | MS.gene68738 | 0.875663 | 2.58E-68 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene68738 | MS.gene004173 | PPI |
MS.gene23896 | MS.gene68738 | PPI |
MS.gene002503 | MS.gene68738 | PPI |
MS.gene027936 | MS.gene68738 | PPI |
MS.gene97720 | MS.gene68738 | PPI |
MS.gene01476 | MS.gene68738 | PPI |
MS.gene68738 | MS.gene02808 | PPI |
MS.gene68738 | MS.gene027933 | PPI |
MS.gene97715 | MS.gene68738 | PPI |
MS.gene23898 | MS.gene68738 | PPI |
MS.gene051310 | MS.gene68738 | PPI |
MS.gene027928 | MS.gene68738 | PPI |
MS.gene68738 | MS.gene051306 | PPI |
MS.gene051305 | MS.gene68738 | PPI |
MS.gene027931 | MS.gene68738 | PPI |
MS.gene047358 | MS.gene68738 | PPI |
MS.gene78935 | MS.gene68738 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68738.t1 | MTR_3g118070 | 99.318 | 440 | 3 | 0 | 1 | 440 | 29 | 468 | 0.0 | 895 |
MS.gene68738.t1 | MTR_3g118070 | 99.270 | 411 | 3 | 0 | 30 | 440 | 1 | 411 | 0.0 | 837 |
MS.gene68738.t1 | MTR_7g451450 | 34.448 | 299 | 169 | 10 | 48 | 333 | 87 | 371 | 9.77e-34 | 132 |
MS.gene68738.t1 | MTR_7g072420 | 27.946 | 297 | 197 | 8 | 48 | 332 | 83 | 374 | 4.25e-21 | 95.9 |
MS.gene68738.t1 | MTR_3g465800 | 27.759 | 299 | 197 | 7 | 47 | 332 | 74 | 366 | 6.93e-19 | 89.0 |
MS.gene68738.t1 | MTR_3g465800 | 28.223 | 287 | 187 | 7 | 59 | 332 | 15 | 295 | 8.98e-19 | 88.2 |
MS.gene68738.t1 | MTR_8g091660 | 25.373 | 335 | 219 | 11 | 47 | 363 | 82 | 403 | 2.09e-17 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68738.t1 | AT3G48730 | 83.182 | 440 | 72 | 1 | 1 | 440 | 35 | 472 | 0.0 | 767 |
MS.gene68738.t1 | AT5G63570 | 80.909 | 440 | 82 | 1 | 1 | 440 | 37 | 474 | 0.0 | 747 |
MS.gene68738.t1 | AT5G63570 | 82.725 | 411 | 71 | 0 | 30 | 440 | 1 | 411 | 0.0 | 717 |
MS.gene68738.t1 | AT5G46180 | 28.882 | 322 | 204 | 8 | 48 | 356 | 59 | 368 | 3.22e-30 | 122 |
MS.gene68738.t1 | AT1G80600 | 29.773 | 309 | 170 | 10 | 48 | 333 | 77 | 361 | 8.35e-26 | 109 |
MS.gene68738.t1 | AT3G08860 | 26.667 | 315 | 206 | 11 | 48 | 346 | 83 | 388 | 2.05e-20 | 93.6 |
MS.gene68738.t1 | AT3G08860 | 26.667 | 315 | 206 | 11 | 48 | 346 | 83 | 388 | 2.94e-20 | 93.2 |
MS.gene68738.t1 | AT4G39660 | 25.519 | 337 | 216 | 11 | 47 | 363 | 77 | 398 | 8.56e-20 | 92.0 |
MS.gene68738.t1 | AT4G39660 | 25.538 | 325 | 207 | 11 | 59 | 363 | 14 | 323 | 1.92e-19 | 90.1 |
MS.gene68738.t1 | AT2G38400 | 25.444 | 338 | 214 | 10 | 47 | 363 | 79 | 399 | 2.36e-16 | 81.6 |
MS.gene68738.t1 | AT2G38400 | 25.444 | 338 | 214 | 10 | 47 | 363 | 79 | 399 | 2.39e-16 | 81.6 |
Find 144 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGTTTGCTAAGTTCTTC+TGG | 0.125787 | 3.2:+93116578 | MS.gene68738:CDS |
TCTTGGGGTCCTGCAATTAT+TGG | 0.214742 | 3.2:+93115541 | MS.gene68738:CDS |
TTGACGGAATCAATGATAAT+TGG | 0.243448 | 3.2:-93115466 | None:intergenic |
TGGAGGTAGGAGAGATATTA+TGG | 0.268158 | 3.2:+93116279 | MS.gene68738:CDS |
CATTGACTATGTTGGTTCTT+GGG | 0.275476 | 3.2:+93115525 | MS.gene68738:CDS |
GTTTCATTGGTGGCAGCTTT+AGG | 0.281598 | 3.2:-93115956 | None:intergenic |
CTGCTGCTGAGAAGGTCTTT+AGG | 0.282740 | 3.2:+93116698 | MS.gene68738:CDS |
TGCTGCTGAGAAGGTCTTTA+GGG | 0.286640 | 3.2:+93116699 | MS.gene68738:CDS |
CTTGATGATCTTCTCTTTGC+CGG | 0.295779 | 3.2:-93115840 | None:intergenic |
CGCAAGGAACTAAGAAAATC+AGG | 0.299535 | 3.2:-93116100 | None:intergenic |
ATATGTGGTGGGCATATAAA+TGG | 0.309935 | 3.2:+93116487 | MS.gene68738:CDS |
TTCCCCAGAGTTGTTATATC+AGG | 0.310573 | 3.2:-93116223 | None:intergenic |
ACATTGACTATGTTGGTTCT+TGG | 0.314847 | 3.2:+93115524 | MS.gene68738:CDS |
CAAGTTTGCTAAGTTCTTCT+GGG | 0.335783 | 3.2:+93116579 | MS.gene68738:CDS |
AGAAACTCTGAAGCGTATTA+AGG | 0.338134 | 3.2:+93116378 | MS.gene68738:CDS |
GAACCTGTTGTTGGAAATTC+CGG | 0.340485 | 3.2:+93116061 | MS.gene68738:CDS |
GTTAGCAGAAGGTGTCTATT+TGG | 0.340874 | 3.2:+93116606 | MS.gene68738:CDS |
GAATACTTGGACAAAATTAC+AGG | 0.342820 | 3.2:+93116415 | MS.gene68738:CDS |
ATGGTCAGATTTGTCAATTC+CGG | 0.345817 | 3.2:+93115773 | MS.gene68738:CDS |
GGCATATAAATGGGATGTTT+GGG | 0.350134 | 3.2:+93116497 | MS.gene68738:CDS |
GGGCATATAAATGGGATGTT+TGG | 0.352503 | 3.2:+93116496 | MS.gene68738:CDS |
GCACCTTCACAGTTTGAGGC+TGG | 0.354758 | 3.2:+93116628 | MS.gene68738:CDS |
TCCAAGTATTCATAAGTTCC+TGG | 0.359322 | 3.2:-93116403 | None:intergenic |
TTAGGAACACCAGGGGAATC+AGG | 0.388149 | 3.2:-93115938 | None:intergenic |
TTTGGCACCTTCACAGTTTG+AGG | 0.388856 | 3.2:+93116624 | MS.gene68738:CDS |
GGCTGTAAGGGTTTCATTGG+TGG | 0.391375 | 3.2:-93115966 | None:intergenic |
GAACTAAGAAAATCAGGTTT+AGG | 0.397600 | 3.2:-93116094 | None:intergenic |
TACGGCTATCTCTCCTTTGT+TGG | 0.403214 | 3.2:-93116029 | None:intergenic |
TATTGGTCACGCTGATGATC+AGG | 0.409676 | 3.2:+93115558 | MS.gene68738:CDS |
TGCTGTTCCCAGCATTGAAA+TGG | 0.417543 | 3.2:+93115754 | MS.gene68738:CDS |
CCAGAAGAACTTAGCAAACT+TGG | 0.420091 | 3.2:-93116578 | None:intergenic |
TTTCTTGTTAAGGCAGGTAG+TGG | 0.428022 | 3.2:+93115896 | MS.gene68738:CDS |
ATGAAGAAAGGAACCAGCTT+TGG | 0.429438 | 3.2:+93115686 | MS.gene68738:CDS |
GACGTTGAGTGGGAATCCTT+TGG | 0.430505 | 3.2:+93116339 | MS.gene68738:CDS |
GTCTTCCTCGAACCTGTTGT+TGG | 0.431603 | 3.2:+93116052 | MS.gene68738:CDS |
CACCTTCACAGTTTGAGGCT+GGG | 0.433643 | 3.2:+93116629 | MS.gene68738:CDS |
CTACCTGCCTTAACAAGAAA+AGG | 0.436782 | 3.2:-93115893 | None:intergenic |
GGTTTGCCAGTAGGTGCATA+TGG | 0.445263 | 3.2:+93116259 | MS.gene68738:CDS |
AAACCGGAATTTCCAACAAC+AGG | 0.445497 | 3.2:-93116064 | None:intergenic |
ACAACTCTGGGGAAGATCAT+TGG | 0.450763 | 3.2:+93116232 | MS.gene68738:CDS |
CCACATGCGAGCACCTTTGA+CGG | 0.452870 | 3.2:-93115482 | None:intergenic |
ACTGGATTCCGTTTGTCGTA+TGG | 0.457113 | 3.2:+93116172 | MS.gene68738:CDS |
TCAGCGTGACCAATAATTGC+AGG | 0.459493 | 3.2:-93115550 | None:intergenic |
ATTGACTATGTTGGTTCTTG+GGG | 0.459541 | 3.2:+93115526 | MS.gene68738:CDS |
TGAGGCTGGGTTCACCAGCT+TGG | 0.460390 | 3.2:+93116642 | MS.gene68738:CDS |
AAATCTGACCATTTCAATGC+TGG | 0.463786 | 3.2:-93115762 | None:intergenic |
CGCCTTGCCCGTGCTTATAC+CGG | 0.463976 | 3.2:+93115821 | MS.gene68738:CDS |
AACTCCTGATATAACAACTC+TGG | 0.465327 | 3.2:+93116219 | MS.gene68738:CDS |
CAGGGGAATCAGGAAGTCCT+AGG | 0.466845 | 3.2:-93115928 | None:intergenic |
TTTGATTAGGAATTGATGCC+TGG | 0.467656 | 3.2:+93115397 | MS.gene68738:intron |
ACTCCTGATATAACAACTCT+GGG | 0.468947 | 3.2:+93116220 | MS.gene68738:CDS |
ATTATCATTGATTCCGTCAA+AGG | 0.468966 | 3.2:+93115469 | MS.gene68738:CDS |
ATGGAGACCGTGGCTCCGGC+TGG | 0.468994 | 3.2:+93116298 | MS.gene68738:CDS |
AGAGAAGATCATCAAGTTTG+AGG | 0.471292 | 3.2:+93115847 | MS.gene68738:CDS |
ATTACAGGTGAGCTTGTTCA+AGG | 0.477356 | 3.2:+93116430 | MS.gene68738:CDS |
AAGACAAGGTGCACCAAAGC+TGG | 0.477394 | 3.2:-93115699 | None:intergenic |
TTCCGGCACTGAAGCATGCA+TGG | 0.479996 | 3.2:+93115790 | MS.gene68738:CDS |
GAGAAGATCATCAAGTTTGA+GGG | 0.481387 | 3.2:+93115848 | MS.gene68738:CDS |
GACCATTGCTGCTGCTGAGA+AGG | 0.485730 | 3.2:+93116690 | MS.gene68738:CDS |
CTCTTTGCCGGTATAAGCAC+GGG | 0.486208 | 3.2:-93115828 | None:intergenic |
TTCGGTGCTGGGCTTCTGGT+CGG | 0.486793 | 3.2:-93115233 | None:intergenic |
GTTCAAGGCATTGTTGAAGC+TGG | 0.489925 | 3.2:+93116445 | MS.gene68738:CDS |
AACCAACATAGTCAATGTAT+TGG | 0.491453 | 3.2:-93115519 | None:intergenic |
ACTGATTTGAAAGCACGAAC+AGG | 0.495762 | 3.2:-93115433 | None:intergenic |
GTGTTTGATGAAGTTATGAC+TGG | 0.497336 | 3.2:+93116154 | MS.gene68738:CDS |
GCCAGGAACTTATGAATACT+TGG | 0.499909 | 3.2:+93116402 | MS.gene68738:CDS |
GCTGGACCTATGTACCAGGC+TGG | 0.502027 | 3.2:+93116316 | MS.gene68738:CDS |
AACAGCAGCAAAGTCATTGA+AGG | 0.503512 | 3.2:-93115990 | None:intergenic |
AATCCTTTGGCAATGACTGC+AGG | 0.505080 | 3.2:+93116352 | MS.gene68738:CDS |
GTTCGTGCTTTCAAATCAGT+TGG | 0.507920 | 3.2:+93115436 | MS.gene68738:CDS |
GAGCACCTCCATACGACAAA+CGG | 0.508625 | 3.2:-93116180 | None:intergenic |
GTTGAAGCTGGTAAGAAGGC+AGG | 0.509704 | 3.2:+93116457 | MS.gene68738:CDS |
AACCAATACATTGACTATGT+TGG | 0.510475 | 3.2:+93115517 | MS.gene68738:CDS |
ACAGGAGAGTTCACACCTCC+AGG | 0.510938 | 3.2:-93115415 | None:intergenic |
TATTATGGAGACCGTGGCTC+CGG | 0.513114 | 3.2:+93116294 | MS.gene68738:CDS |
AACGTCCCAGCCTGGTACAT+AGG | 0.518158 | 3.2:-93116322 | None:intergenic |
GCCTGGTACATAGGTCCAGC+CGG | 0.518203 | 3.2:-93116313 | None:intergenic |
TTCTGGGGTATGTTAGCAGA+AGG | 0.519712 | 3.2:+93116595 | MS.gene68738:CDS |
GACCTTCTCAGCAGCAGCAA+TGG | 0.522852 | 3.2:-93116692 | None:intergenic |
CTAGGACTTCCTGATTCCCC+TGG | 0.524552 | 3.2:+93115929 | MS.gene68738:CDS |
GGTGCTGGGCTTCTGGTCGG+TGG | 0.527286 | 3.2:-93115230 | None:intergenic |
TGAAAACACTCTAGCTGAGA+TGG | 0.530589 | 3.2:+93115724 | MS.gene68738:CDS |
ACCCATGCATGCTTCAGTGC+CGG | 0.530882 | 3.2:-93115792 | None:intergenic |
CTACCTCCATATGCACCTAC+TGG | 0.530999 | 3.2:-93116265 | None:intergenic |
CGTGCTTTCAAATCAGTTGG+TGG | 0.531486 | 3.2:+93115439 | MS.gene68738:CDS |
CCGTCAAAGGTGCTCGCATG+TGG | 0.532480 | 3.2:+93115482 | MS.gene68738:CDS |
TACCAGGCTGGGACGTTGAG+TGG | 0.532692 | 3.2:+93116328 | MS.gene68738:CDS |
GAGAAGGGCATTGTTCTCCT+TGG | 0.539822 | 3.2:-93116131 | None:intergenic |
CATTGTTGAAGCTGGTAAGA+AGG | 0.540418 | 3.2:+93116453 | MS.gene68738:CDS |
AGGTTTAGGAGTAATGAAAC+CGG | 0.540434 | 3.2:-93116080 | None:intergenic |
GGAGGTGCTCAACAATACTT+TGG | 0.540803 | 3.2:+93116193 | MS.gene68738:CDS |
CTGAAGCGTATTAAGGAGCC+AGG | 0.542721 | 3.2:+93116385 | MS.gene68738:CDS |
CTGGACCTATGTACCAGGCT+GGG | 0.542962 | 3.2:+93116317 | MS.gene68738:CDS |
AATTTCCAACAACAGGTTCG+AGG | 0.544211 | 3.2:-93116057 | None:intergenic |
TGCCGGTATAAGCACGGGCA+AGG | 0.545023 | 3.2:-93115823 | None:intergenic |
ATCAGAAGTATGTGCCAAGC+TGG | 0.549286 | 3.2:-93116656 | None:intergenic |
TCCGGCTGGACCTATGTACC+AGG | 0.550164 | 3.2:+93116312 | MS.gene68738:CDS |
AATCTGACCATTTCAATGCT+GGG | 0.551104 | 3.2:-93115761 | None:intergenic |
GCTCGCATGTGGGACATTGA+TGG | 0.552562 | 3.2:+93115493 | MS.gene68738:CDS |
GGTAGTGGAGTTGCCACCCT+AGG | 0.552592 | 3.2:+93115911 | MS.gene68738:CDS |
TCCCACTCAACGTCCCAGCC+TGG | 0.554590 | 3.2:-93116330 | None:intergenic |
CTTGCTGAGACAATGAAGAA+AGG | 0.555611 | 3.2:+93115674 | MS.gene68738:CDS |
TCTCTTTGCCGGTATAAGCA+CGG | 0.568722 | 3.2:-93115829 | None:intergenic |
CATAGGTCCAGCCGGAGCCA+CGG | 0.570397 | 3.2:-93116305 | None:intergenic |
GTGGCAGCTTTAGGAACACC+AGG | 0.571077 | 3.2:-93115947 | None:intergenic |
ACAGCAGCAAAGTCATTGAA+GGG | 0.578728 | 3.2:-93115989 | None:intergenic |
GCAGGGCATGCAATATGTGG+TGG | 0.581592 | 3.2:+93116475 | MS.gene68738:CDS |
TATGTGGTGGGCATATAAAT+GGG | 0.582602 | 3.2:+93116488 | MS.gene68738:CDS |
AAGTTTGCTAAGTTCTTCTG+GGG | 0.584115 | 3.2:+93116580 | MS.gene68738:CDS |
TAACTTCATCAAACACGAGA+AGG | 0.585499 | 3.2:-93116147 | None:intergenic |
TTGAAGCTGGTAAGAAGGCA+GGG | 0.585619 | 3.2:+93116458 | MS.gene68738:CDS |
AGGGGAATCAGGAAGTCCTA+GGG | 0.587377 | 3.2:-93115927 | None:intergenic |
GGATTCCGTTTGTCGTATGG+AGG | 0.588634 | 3.2:+93116175 | MS.gene68738:CDS |
AAGTTTGAGGGATGTTATCA+CGG | 0.591307 | 3.2:+93115860 | MS.gene68738:CDS |
AAGGCAGGGCATGCAATATG+TGG | 0.593656 | 3.2:+93116472 | MS.gene68738:CDS |
CTTCATTGTCTCAGCAAGAG+CGG | 0.594962 | 3.2:-93115669 | None:intergenic |
ATGCCTGCAGTCATTGCCAA+AGG | 0.596171 | 3.2:-93116355 | None:intergenic |
ACTCTGGGGAAGATCATTGG+AGG | 0.600178 | 3.2:+93116235 | MS.gene68738:CDS |
CAGTAGGTGCATATGGAGGT+AGG | 0.601307 | 3.2:+93116266 | MS.gene68738:CDS |
AGAAGCTTTCGCAGCTGCAA+AGG | 0.604865 | 3.2:+93115279 | MS.gene68738:CDS |
TCCGGCACTGAAGCATGCAT+GGG | 0.605633 | 3.2:+93115791 | MS.gene68738:CDS |
CAGGGCATGCAATATGTGGT+GGG | 0.605835 | 3.2:+93116476 | MS.gene68738:CDS |
ACCAGGCTGGGACGTTGAGT+GGG | 0.609650 | 3.2:+93116329 | MS.gene68738:CDS |
CTGGGGAAGATCATTGGAGG+GGG | 0.612965 | 3.2:+93116238 | MS.gene68738:CDS |
AACTTCATCAAACACGAGAA+GGG | 0.614126 | 3.2:-93116146 | None:intergenic |
AACAGGTTCGAGGAAGACTA+CGG | 0.621214 | 3.2:-93116047 | None:intergenic |
CGTCAAAGGTGCTCGCATGT+GGG | 0.625959 | 3.2:+93115483 | MS.gene68738:CDS |
AACCCAGCCTCAAACTGTGA+AGG | 0.634803 | 3.2:-93116631 | None:intergenic |
AAGATCTTTGAAGCCAACAA+AGG | 0.638698 | 3.2:+93116016 | MS.gene68738:CDS |
GCATCTGTGAAATTGTACAC+AGG | 0.641026 | 3.2:-93116538 | None:intergenic |
GGAATCAGGAAGTCCTAGGG+TGG | 0.643441 | 3.2:-93115924 | None:intergenic |
CGGTATAAGCACGGGCAAGG+CGG | 0.653099 | 3.2:-93115820 | None:intergenic |
CAGCAGCAAAGTCATTGAAG+GGG | 0.654908 | 3.2:-93115988 | None:intergenic |
GAGAGATATTATGGAGACCG+TGG | 0.661183 | 3.2:+93116288 | MS.gene68738:CDS |
TCTGGGGAAGATCATTGGAG+GGG | 0.662523 | 3.2:+93116237 | MS.gene68738:CDS |
AGCAGCAAAGTCATTGAAGG+GGG | 0.664856 | 3.2:-93115987 | None:intergenic |
CTCTGGGGAAGATCATTGGA+GGG | 0.675119 | 3.2:+93116236 | MS.gene68738:CDS |
TAACAAGAAAAGGATCAGCA+TGG | 0.678181 | 3.2:-93115883 | None:intergenic |
TTCCTTGCGCAAAATCACCA+AGG | 0.686509 | 3.2:+93116114 | MS.gene68738:CDS |
TTGCCAGTAGGTGCATATGG+AGG | 0.697062 | 3.2:+93116262 | MS.gene68738:CDS |
GGCAGCTTTAGGAACACCAG+GGG | 0.703847 | 3.2:-93115945 | None:intergenic |
TGGCAGCTTTAGGAACACCA+GGG | 0.708271 | 3.2:-93115946 | None:intergenic |
GATTAGGAATTGATGCCTGG+AGG | 0.717601 | 3.2:+93115400 | MS.gene68738:intron |
CTCCTGATATAACAACTCTG+GGG | 0.744293 | 3.2:+93116221 | MS.gene68738:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAACATAAAAGTTTGA+AGG | - | chr3.2:93115638-93115657 | None:intergenic | 15.0% |
!!! | AAACTTTTATGTTTAATTTC+AGG | + | chr3.2:93115640-93115659 | MS.gene68738:intron | 15.0% |
!!! | ATGTAATAATCGATTTGATT+AGG | + | chr3.2:93115384-93115403 | MS.gene68738:intron | 20.0% |
! | AATATATGAGAGAATTGAAG+AGG | - | chr3.2:93115603-93115622 | None:intergenic | 25.0% |
AACCAACATAGTCAATGTAT+TGG | - | chr3.2:93115522-93115541 | None:intergenic | 30.0% | |
GAACTAAGAAAATCAGGTTT+AGG | - | chr3.2:93116097-93116116 | None:intergenic | 30.0% | |
GAATACTTGGACAAAATTAC+AGG | + | chr3.2:93116415-93116434 | MS.gene68738:CDS | 30.0% | |
TTGACGGAATCAATGATAAT+TGG | - | chr3.2:93115469-93115488 | None:intergenic | 30.0% | |
! | AACCAATACATTGACTATGT+TGG | + | chr3.2:93115517-93115536 | MS.gene68738:CDS | 30.0% |
!! | ATTATCATTGATTCCGTCAA+AGG | + | chr3.2:93115469-93115488 | MS.gene68738:CDS | 30.0% |
AAATCTGACCATTTCAATGC+TGG | - | chr3.2:93115765-93115784 | None:intergenic | 35.0% | |
AACTCCTGATATAACAACTC+TGG | + | chr3.2:93116219-93116238 | MS.gene68738:CDS | 35.0% | |
AACTTCATCAAACACGAGAA+GGG | - | chr3.2:93116149-93116168 | None:intergenic | 35.0% | |
AAGTTTGAGGGATGTTATCA+CGG | + | chr3.2:93115860-93115879 | MS.gene68738:CDS | 35.0% | |
AATCTGACCATTTCAATGCT+GGG | - | chr3.2:93115764-93115783 | None:intergenic | 35.0% | |
ACTCCTGATATAACAACTCT+GGG | + | chr3.2:93116220-93116239 | MS.gene68738:CDS | 35.0% | |
AGAGAAGATCATCAAGTTTG+AGG | + | chr3.2:93115847-93115866 | MS.gene68738:CDS | 35.0% | |
AGGTTTAGGAGTAATGAAAC+CGG | - | chr3.2:93116083-93116102 | None:intergenic | 35.0% | |
ATGGTCAGATTTGTCAATTC+CGG | + | chr3.2:93115773-93115792 | MS.gene68738:CDS | 35.0% | |
GAGAAGATCATCAAGTTTGA+GGG | + | chr3.2:93115848-93115867 | MS.gene68738:CDS | 35.0% | |
GGCATATAAATGGGATGTTT+GGG | + | chr3.2:93116497-93116516 | MS.gene68738:CDS | 35.0% | |
GTGTTTGATGAAGTTATGAC+TGG | + | chr3.2:93116154-93116173 | MS.gene68738:CDS | 35.0% | |
TAACAAGAAAAGGATCAGCA+TGG | - | chr3.2:93115886-93115905 | None:intergenic | 35.0% | |
TAACTTCATCAAACACGAGA+AGG | - | chr3.2:93116150-93116169 | None:intergenic | 35.0% | |
TCCAAGTATTCATAAGTTCC+TGG | - | chr3.2:93116406-93116425 | None:intergenic | 35.0% | |
TTTGATTAGGAATTGATGCC+TGG | + | chr3.2:93115397-93115416 | MS.gene68738:intron | 35.0% | |
! | TGCTGATCCTTTTCTTGTTA+AGG | + | chr3.2:93115886-93115905 | MS.gene68738:CDS | 35.0% |
! | TTTGCGAAGAGTGAGTTTTT+CGG | - | chr3.2:93115254-93115273 | None:intergenic | 35.0% |
!! | AAGATCTTTGAAGCCAACAA+AGG | + | chr3.2:93116016-93116035 | MS.gene68738:CDS | 35.0% |
!! | AAGTTTGCTAAGTTCTTCTG+GGG | + | chr3.2:93116580-93116599 | MS.gene68738:CDS | 35.0% |
!! | ACATTGACTATGTTGGTTCT+TGG | + | chr3.2:93115524-93115543 | MS.gene68738:CDS | 35.0% |
!! | AGAAACTCTGAAGCGTATTA+AGG | + | chr3.2:93116378-93116397 | MS.gene68738:CDS | 35.0% |
!! | AGAGTGTTTTCAAGAAGACA+AGG | - | chr3.2:93115716-93115735 | None:intergenic | 35.0% |
!! | ATATGTGGTGGGCATATAAA+TGG | + | chr3.2:93116487-93116506 | MS.gene68738:CDS | 35.0% |
!! | ATTGACTATGTTGGTTCTTG+GGG | + | chr3.2:93115526-93115545 | MS.gene68738:CDS | 35.0% |
!! | CAAGTTTGCTAAGTTCTTCT+GGG | + | chr3.2:93116579-93116598 | MS.gene68738:CDS | 35.0% |
!! | CATTGACTATGTTGGTTCTT+GGG | + | chr3.2:93115525-93115544 | MS.gene68738:CDS | 35.0% |
!! | TATGTGGTGGGCATATAAAT+GGG | + | chr3.2:93116488-93116507 | MS.gene68738:CDS | 35.0% |
!! | TTTGGGTTTTTCTTCACAGA+AGG | + | chr3.2:93116514-93116533 | MS.gene68738:CDS | 35.0% |
AAACCGGAATTTCCAACAAC+AGG | - | chr3.2:93116067-93116086 | None:intergenic | 40.0% | |
AACAGCAGCAAAGTCATTGA+AGG | - | chr3.2:93115993-93116012 | None:intergenic | 40.0% | |
AATTTCCAACAACAGGTTCG+AGG | - | chr3.2:93116060-93116079 | None:intergenic | 40.0% | |
ACAGCAGCAAAGTCATTGAA+GGG | - | chr3.2:93115992-93116011 | None:intergenic | 40.0% | |
ATGAAGAAAGGAACCAGCTT+TGG | + | chr3.2:93115686-93115705 | MS.gene68738:CDS | 40.0% | |
CATTGTTGAAGCTGGTAAGA+AGG | + | chr3.2:93116453-93116472 | MS.gene68738:CDS | 40.0% | |
CCAGAAGAACTTAGCAAACT+TGG | - | chr3.2:93116581-93116600 | None:intergenic | 40.0% | |
CGCAAGGAACTAAGAAAATC+AGG | - | chr3.2:93116103-93116122 | None:intergenic | 40.0% | |
CTACCTGCCTTAACAAGAAA+AGG | - | chr3.2:93115896-93115915 | None:intergenic | 40.0% | |
CTCCTGATATAACAACTCTG+GGG | + | chr3.2:93116221-93116240 | MS.gene68738:CDS | 40.0% | |
CTTGCTGAGACAATGAAGAA+AGG | + | chr3.2:93115674-93115693 | MS.gene68738:CDS | 40.0% | |
GAACCTGTTGTTGGAAATTC+CGG | + | chr3.2:93116061-93116080 | MS.gene68738:CDS | 40.0% | |
GCATCTGTGAAATTGTACAC+AGG | - | chr3.2:93116541-93116560 | None:intergenic | 40.0% | |
GCCAGGAACTTATGAATACT+TGG | + | chr3.2:93116402-93116421 | MS.gene68738:CDS | 40.0% | |
GGGCATATAAATGGGATGTT+TGG | + | chr3.2:93116496-93116515 | MS.gene68738:CDS | 40.0% | |
GTTCGTGCTTTCAAATCAGT+TGG | + | chr3.2:93115436-93115455 | MS.gene68738:CDS | 40.0% | |
TGAAAACACTCTAGCTGAGA+TGG | + | chr3.2:93115724-93115743 | MS.gene68738:CDS | 40.0% | |
TGGAGGTAGGAGAGATATTA+TGG | + | chr3.2:93116279-93116298 | MS.gene68738:CDS | 40.0% | |
TTCCCCAGAGTTGTTATATC+AGG | - | chr3.2:93116226-93116245 | None:intergenic | 40.0% | |
TTTCTTGTTAAGGCAGGTAG+TGG | + | chr3.2:93115896-93115915 | MS.gene68738:CDS | 40.0% | |
! | ATTACAGGTGAGCTTGTTCA+AGG | + | chr3.2:93116430-93116449 | MS.gene68738:CDS | 40.0% |
! | CTTGATGATCTTCTCTTTGC+CGG | - | chr3.2:93115843-93115862 | None:intergenic | 40.0% |
! | GATCCTTTTCTTGTTAAGGC+AGG | + | chr3.2:93115890-93115909 | MS.gene68738:CDS | 40.0% |
!! | ACTGATTTGAAAGCACGAAC+AGG | - | chr3.2:93115436-93115455 | None:intergenic | 40.0% |
!! | CCAAGTTTGCTAAGTTCTTC+TGG | + | chr3.2:93116578-93116597 | MS.gene68738:CDS | 40.0% |
!! | GTTAGCAGAAGGTGTCTATT+TGG | + | chr3.2:93116606-93116625 | MS.gene68738:CDS | 40.0% |
AACAGGTTCGAGGAAGACTA+CGG | - | chr3.2:93116050-93116069 | None:intergenic | 45.0% | |
AATCCTTTGGCAATGACTGC+AGG | + | chr3.2:93116352-93116371 | MS.gene68738:CDS | 45.0% | |
ACTGGATTCCGTTTGTCGTA+TGG | + | chr3.2:93116172-93116191 | MS.gene68738:CDS | 45.0% | |
AGCAGCAAAGTCATTGAAGG+GGG | - | chr3.2:93115990-93116009 | None:intergenic | 45.0% | |
CAGCAGCAAAGTCATTGAAG+GGG | - | chr3.2:93115991-93116010 | None:intergenic | 45.0% | |
CGTGCTTTCAAATCAGTTGG+TGG | + | chr3.2:93115439-93115458 | MS.gene68738:CDS | 45.0% | |
CTTCATTGTCTCAGCAAGAG+CGG | - | chr3.2:93115672-93115691 | None:intergenic | 45.0% | |
GAGAGATATTATGGAGACCG+TGG | + | chr3.2:93116288-93116307 | MS.gene68738:CDS | 45.0% | |
GATTAGGAATTGATGCCTGG+AGG | + | chr3.2:93115400-93115419 | MS.gene68738:intron | 45.0% | |
TACGGCTATCTCTCCTTTGT+TGG | - | chr3.2:93116032-93116051 | None:intergenic | 45.0% | |
TATTGGTCACGCTGATGATC+AGG | + | chr3.2:93115558-93115577 | MS.gene68738:CDS | 45.0% | |
TCAGCGTGACCAATAATTGC+AGG | - | chr3.2:93115553-93115572 | None:intergenic | 45.0% | |
TCTCTTTGCCGGTATAAGCA+CGG | - | chr3.2:93115832-93115851 | None:intergenic | 45.0% | |
TCTTGGGGTCCTGCAATTAT+TGG | + | chr3.2:93115541-93115560 | MS.gene68738:CDS | 45.0% | |
TGCTGCTGAGAAGGTCTTTA+GGG | + | chr3.2:93116699-93116718 | MS.gene68738:CDS | 45.0% | |
TTCCTTGCGCAAAATCACCA+AGG | + | chr3.2:93116114-93116133 | MS.gene68738:CDS | 45.0% | |
TTGAAGCTGGTAAGAAGGCA+GGG | + | chr3.2:93116458-93116477 | MS.gene68738:CDS | 45.0% | |
TTTGGCACCTTCACAGTTTG+AGG | + | chr3.2:93116624-93116643 | MS.gene68738:CDS | 45.0% | |
! | ACAACTCTGGGGAAGATCAT+TGG | + | chr3.2:93116232-93116251 | MS.gene68738:CDS | 45.0% |
! | ATCAGAAGTATGTGCCAAGC+TGG | - | chr3.2:93116659-93116678 | None:intergenic | 45.0% |
! | GTTTCATTGGTGGCAGCTTT+AGG | - | chr3.2:93115959-93115978 | None:intergenic | 45.0% |
! | TGCTGTTCCCAGCATTGAAA+TGG | + | chr3.2:93115754-93115773 | MS.gene68738:CDS | 45.0% |
!! | AAGAGTGAGTTTTTCGGTGC+TGG | - | chr3.2:93115248-93115267 | None:intergenic | 45.0% |
!! | GGAGGTGCTCAACAATACTT+TGG | + | chr3.2:93116193-93116212 | MS.gene68738:CDS | 45.0% |
!! | GTTCAAGGCATTGTTGAAGC+TGG | + | chr3.2:93116445-93116464 | MS.gene68738:CDS | 45.0% |
!! | TTCTGGGGTATGTTAGCAGA+AGG | + | chr3.2:93116595-93116614 | MS.gene68738:CDS | 45.0% |
!!! | AGAGTGAGTTTTTCGGTGCT+GGG | - | chr3.2:93115247-93115266 | None:intergenic | 45.0% |
AACCCAGCCTCAAACTGTGA+AGG | - | chr3.2:93116634-93116653 | None:intergenic | 50.0% | |
AAGACAAGGTGCACCAAAGC+TGG | - | chr3.2:93115702-93115721 | None:intergenic | 50.0% | |
AAGGCAGGGCATGCAATATG+TGG | + | chr3.2:93116472-93116491 | MS.gene68738:CDS | 50.0% | |
AGAAGCTTTCGCAGCTGCAA+AGG | + | chr3.2:93115279-93115298 | MS.gene68738:CDS | 50.0% | |
AGGGGAATCAGGAAGTCCTA+GGG | - | chr3.2:93115930-93115949 | None:intergenic | 50.0% | |
AGTCATTGAAGGGGGCTGTA+AGG | - | chr3.2:93115982-93116001 | None:intergenic | 50.0% | |
ATGCCTGCAGTCATTGCCAA+AGG | - | chr3.2:93116358-93116377 | None:intergenic | 50.0% | |
CAGGGCATGCAATATGTGGT+GGG | + | chr3.2:93116476-93116495 | MS.gene68738:CDS | 50.0% | |
CAGTAGGTGCATATGGAGGT+AGG | + | chr3.2:93116266-93116285 | MS.gene68738:CDS | 50.0% | |
CTACCTCCATATGCACCTAC+TGG | - | chr3.2:93116268-93116287 | None:intergenic | 50.0% | |
CTCTTTGCCGGTATAAGCAC+GGG | - | chr3.2:93115831-93115850 | None:intergenic | 50.0% | |
CTGAAGCGTATTAAGGAGCC+AGG | + | chr3.2:93116385-93116404 | MS.gene68738:CDS | 50.0% | |
CTGCTGCTGAGAAGGTCTTT+AGG | + | chr3.2:93116698-93116717 | MS.gene68738:CDS | 50.0% | |
GACGTTGAGTGGGAATCCTT+TGG | + | chr3.2:93116339-93116358 | MS.gene68738:CDS | 50.0% | |
GAGCACCTCCATACGACAAA+CGG | - | chr3.2:93116183-93116202 | None:intergenic | 50.0% | |
GGATTCCGTTTGTCGTATGG+AGG | + | chr3.2:93116175-93116194 | MS.gene68738:CDS | 50.0% | |
GGCTGTAAGGGTTTCATTGG+TGG | - | chr3.2:93115969-93115988 | None:intergenic | 50.0% | |
GGTTTGCCAGTAGGTGCATA+TGG | + | chr3.2:93116259-93116278 | MS.gene68738:CDS | 50.0% | |
GTCATTGAAGGGGGCTGTAA+GGG | - | chr3.2:93115981-93116000 | None:intergenic | 50.0% | |
GTCTTCCTCGAACCTGTTGT+TGG | + | chr3.2:93116052-93116071 | MS.gene68738:CDS | 50.0% | |
GTTGAAGCTGGTAAGAAGGC+AGG | + | chr3.2:93116457-93116476 | MS.gene68738:CDS | 50.0% | |
TATTATGGAGACCGTGGCTC+CGG | + | chr3.2:93116294-93116313 | MS.gene68738:CDS | 50.0% | |
TCTGGGGAAGATCATTGGAG+GGG | + | chr3.2:93116237-93116256 | MS.gene68738:CDS | 50.0% | |
TTAGGAACACCAGGGGAATC+AGG | - | chr3.2:93115941-93115960 | None:intergenic | 50.0% | |
TTGCCAGTAGGTGCATATGG+AGG | + | chr3.2:93116262-93116281 | MS.gene68738:CDS | 50.0% | |
! | ACTCTGGGGAAGATCATTGG+AGG | + | chr3.2:93116235-93116254 | MS.gene68738:CDS | 50.0% |
! | CACCTTCACAGTTTGAGGCT+GGG | + | chr3.2:93116629-93116648 | MS.gene68738:CDS | 50.0% |
! | CTCTGGGGAAGATCATTGGA+GGG | + | chr3.2:93116236-93116255 | MS.gene68738:CDS | 50.0% |
!! | CTCCTTGGTGATTTTGCGCA+AGG | - | chr3.2:93116119-93116138 | None:intergenic | 50.0% |
!! | GAGAAGGGCATTGTTCTCCT+TGG | - | chr3.2:93116134-93116153 | None:intergenic | 50.0% |
!! | TGGCAGCTTTAGGAACACCA+GGG | - | chr3.2:93115949-93115968 | None:intergenic | 50.0% |
AACGTCCCAGCCTGGTACAT+AGG | - | chr3.2:93116325-93116344 | None:intergenic | 55.0% | |
ACAGGAGAGTTCACACCTCC+AGG | - | chr3.2:93115418-93115437 | None:intergenic | 55.0% | |
ACCCATGCATGCTTCAGTGC+CGG | - | chr3.2:93115795-93115814 | None:intergenic | 55.0% | |
ATTGGAGGGGGTTTGCCAGT+AGG | + | chr3.2:93116250-93116269 | MS.gene68738:CDS | 55.0% | |
CAGGGGAATCAGGAAGTCCT+AGG | - | chr3.2:93115931-93115950 | None:intergenic | 55.0% | |
CCACATGCGAGCACCTTTGA+CGG | - | chr3.2:93115485-93115504 | None:intergenic | 55.0% | |
CTAGGACTTCCTGATTCCCC+TGG | + | chr3.2:93115929-93115948 | MS.gene68738:CDS | 55.0% | |
CTGGACCTATGTACCAGGCT+GGG | + | chr3.2:93116317-93116336 | MS.gene68738:CDS | 55.0% | |
CTGGGGAAGATCATTGGAGG+GGG | + | chr3.2:93116238-93116257 | MS.gene68738:CDS | 55.0% | |
GACCATTGCTGCTGCTGAGA+AGG | + | chr3.2:93116690-93116709 | MS.gene68738:CDS | 55.0% | |
GACCTTCTCAGCAGCAGCAA+TGG | - | chr3.2:93116695-93116714 | None:intergenic | 55.0% | |
GCAGGGCATGCAATATGTGG+TGG | + | chr3.2:93116475-93116494 | MS.gene68738:CDS | 55.0% | |
GCTCGCATGTGGGACATTGA+TGG | + | chr3.2:93115493-93115512 | MS.gene68738:CDS | 55.0% | |
GGAATCAGGAAGTCCTAGGG+TGG | - | chr3.2:93115927-93115946 | None:intergenic | 55.0% | |
GGGGGCTGTAAGGGTTTCAT+TGG | - | chr3.2:93115972-93115991 | None:intergenic | 55.0% | |
! | GCACCTTCACAGTTTGAGGC+TGG | + | chr3.2:93116628-93116647 | MS.gene68738:CDS | 55.0% |
! | TCCGGCACTGAAGCATGCAT+GGG | + | chr3.2:93115791-93115810 | MS.gene68738:CDS | 55.0% |
! | TTCCGGCACTGAAGCATGCA+TGG | + | chr3.2:93115790-93115809 | MS.gene68738:CDS | 55.0% |
!! | CGTCAAAGGTGCTCGCATGT+GGG | + | chr3.2:93115483-93115502 | MS.gene68738:CDS | 55.0% |
!! | GGCAGCTTTAGGAACACCAG+GGG | - | chr3.2:93115948-93115967 | None:intergenic | 55.0% |
!! | GTGGCAGCTTTAGGAACACC+AGG | - | chr3.2:93115950-93115969 | None:intergenic | 55.0% |
!!! | GTTTTTCGGTGCTGGGCTTC+TGG | - | chr3.2:93115240-93115259 | None:intergenic | 55.0% |
ACCAGGCTGGGACGTTGAGT+GGG | + | chr3.2:93116329-93116348 | MS.gene68738:CDS | 60.0% | |
CGCCTTGCCCGTGCTTATAC+CGG | + | chr3.2:93115821-93115840 | MS.gene68738:CDS | 60.0% | |
CGGTATAAGCACGGGCAAGG+CGG | - | chr3.2:93115823-93115842 | None:intergenic | 60.0% | |
GCCTGGTACATAGGTCCAGC+CGG | - | chr3.2:93116316-93116335 | None:intergenic | 60.0% | |
GCTGGACCTATGTACCAGGC+TGG | + | chr3.2:93116316-93116335 | MS.gene68738:CDS | 60.0% | |
TACCAGGCTGGGACGTTGAG+TGG | + | chr3.2:93116328-93116347 | MS.gene68738:CDS | 60.0% | |
TCCGGCTGGACCTATGTACC+AGG | + | chr3.2:93116312-93116331 | MS.gene68738:CDS | 60.0% | |
TGAGGCTGGGTTCACCAGCT+TGG | + | chr3.2:93116642-93116661 | MS.gene68738:CDS | 60.0% | |
TGCCGGTATAAGCACGGGCA+AGG | - | chr3.2:93115826-93115845 | None:intergenic | 60.0% | |
!! | CCGTCAAAGGTGCTCGCATG+TGG | + | chr3.2:93115482-93115501 | MS.gene68738:CDS | 60.0% |
!! | GGTAGTGGAGTTGCCACCCT+AGG | + | chr3.2:93115911-93115930 | MS.gene68738:CDS | 60.0% |
!! | TTCGGTGCTGGGCTTCTGGT+CGG | - | chr3.2:93115236-93115255 | None:intergenic | 60.0% |
CATAGGTCCAGCCGGAGCCA+CGG | - | chr3.2:93116308-93116327 | None:intergenic | 65.0% | |
TCCCACTCAACGTCCCAGCC+TGG | - | chr3.2:93116333-93116352 | None:intergenic | 65.0% | |
ATGGAGACCGTGGCTCCGGC+TGG | + | chr3.2:93116298-93116317 | MS.gene68738:CDS | 70.0% | |
! | GGTGCTGGGCTTCTGGTCGG+TGG | - | chr3.2:93115233-93115252 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 93115220 | 93116729 | 93115220 | ID=MS.gene68738 |
chr3.2 | mRNA | 93115220 | 93116729 | 93115220 | ID=MS.gene68738.t1;Parent=MS.gene68738 |
chr3.2 | exon | 93115220 | 93115300 | 93115220 | ID=MS.gene68738.t1.exon1;Parent=MS.gene68738.t1 |
chr3.2 | CDS | 93115220 | 93115300 | 93115220 | ID=cds.MS.gene68738.t1;Parent=MS.gene68738.t1 |
chr3.2 | exon | 93115406 | 93115579 | 93115406 | ID=MS.gene68738.t1.exon2;Parent=MS.gene68738.t1 |
chr3.2 | CDS | 93115406 | 93115579 | 93115406 | ID=cds.MS.gene68738.t1;Parent=MS.gene68738.t1 |
chr3.2 | exon | 93115662 | 93116729 | 93115662 | ID=MS.gene68738.t1.exon3;Parent=MS.gene68738.t1 |
chr3.2 | CDS | 93115662 | 93116729 | 93115662 | ID=cds.MS.gene68738.t1;Parent=MS.gene68738.t1 |
Gene Sequence |
Protein sequence |