Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045097.01.T04 | ANS11034.1 | 100 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 1.87E-19 | 82 |
| MsG0880045097.01.T01 | YP_010158523.1 | 95.745 | 47 | 2 | 0 | 1 | 47 | 1 | 47 | 3.00E-24 | 96.3 |
| MsG0880045097.01.T02 | QBS31917.1 | 97.222 | 72 | 2 | 0 | 1 | 72 | 22 | 93 | 5.31E-43 | 144 |
| MsG0880045097.01.T03 | QYB23389.1 | 100 | 32 | 0 | 0 | 7 | 38 | 2 | 33 | 4.24E-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045097.01.T02 | A0ZZ52 | 97.222 | 72 | 2 | 0 | 1 | 72 | 12 | 83 | 1.22E-45 | 143 |
| MsG0880045097.01.T04 | A0A351 | 100 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 3.70E-22 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045097.01.T01 | A0A7S9A1D7 | 95.745 | 47 | 2 | 0 | 1 | 47 | 1 | 47 | 1.43e-24 | 96.3 |
| MsG0880045097.01.T02 | A0A510BV48 | 98.611 | 72 | 1 | 0 | 1 | 72 | 12 | 83 | 3.37e-43 | 143 |
| MsG0880045097.01.T04 | A0A059PT55 | 100.000 | 39 | 0 | 0 | 1 | 39 | 1 | 39 | 1.42e-19 | 81.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0880045097.01 | 0.848006 | 8.066678e-60 | 1.459790e-56 |
| MsG0080048560.01 | MsG0880045097.01 | 0.856021 | 4.262292e-62 | 1.003367e-58 |
| MsG0080048690.01 | MsG0880045097.01 | 0.855351 | 6.688040e-62 | 1.539886e-58 |
| MsG0080048692.01 | MsG0880045097.01 | 0.868392 | 6.758769e-66 | 2.440653e-62 |
| MsG0080048693.01 | MsG0880045097.01 | 0.831215 | 1.894332e-55 | 2.042027e-52 |
| MsG0080048694.01 | MsG0880045097.01 | 0.871648 | 5.824678e-67 | 2.367678e-63 |
| MsG0080048695.01 | MsG0880045097.01 | 0.871441 | 6.817984e-67 | 2.751051e-63 |
| MsG0080048697.01 | MsG0880045097.01 | 0.871571 | 6.176899e-67 | 2.503757e-63 |
| MsG0080048698.01 | MsG0880045097.01 | 0.803787 | 2.951388e-49 | 1.496512e-46 |
| MsG0080048699.01 | MsG0880045097.01 | 0.817909 | 2.582620e-52 | 1.905166e-49 |
| MsG0080048800.01 | MsG0880045097.01 | 0.811524 | 6.705925e-51 | 4.160557e-48 |
| MsG0080048813.01 | MsG0880045097.01 | 0.811355 | 7.296170e-51 | 4.506249e-48 |
| MsG0080049066.01 | MsG0880045097.01 | 0.808351 | 3.232007e-50 | 1.843856e-47 |
| MsG0080049076.01 | MsG0880045097.01 | 0.879513 | 1.172250e-69 | 6.372772e-66 |
| MsG0180000417.01 | MsG0880045097.01 | 0.807591 | 4.690180e-50 | 2.622616e-47 |
| MsG0180000719.01 | MsG0880045097.01 | 0.811124 | 8.188111e-51 | 5.026728e-48 |
| MsG0180001072.01 | MsG0880045097.01 | 0.827040 | 1.948871e-54 | 1.859611e-51 |
| MsG0180001925.01 | MsG0880045097.01 | 0.861616 | 9.051211e-64 | 2.576441e-60 |
| MsG0180002099.01 | MsG0880045097.01 | 0.804490 | 2.106824e-49 | 1.087704e-46 |
| MsG0180002214.01 | MsG0880045097.01 | 0.818686 | 1.721768e-52 | 1.297632e-49 |
| MsG0180002425.01 | MsG0880045097.01 | 0.811045 | 8.519626e-51 | 5.219505e-48 |
| MsG0180002426.01 | MsG0880045097.01 | 0.800946 | 1.135200e-48 | 5.354580e-46 |
| MsG0180002439.01 | MsG0880045097.01 | 0.810518 | 1.107489e-50 | 6.689938e-48 |
| MsG0180002546.01 | MsG0880045097.01 | 0.803157 | 3.985192e-49 | 1.988294e-46 |
| MsG0880044968.01 | MsG0880045097.01 | 0.806637 | 7.466274e-50 | 4.072950e-47 |
| MsG0880045097.01 | MsG0880045188.01 | 0.815498 | 8.964533e-52 | 6.191166e-49 |
| MsG0880045097.01 | MsG0880045273.01 | 0.819279 | 1.262617e-52 | 9.672802e-50 |
| MsG0880045097.01 | MsG0880045274.01 | 0.817854 | 2.657227e-52 | 1.957365e-49 |
| MsG0880045097.01 | MsG0880045321.01 | 0.812521 | 4.065583e-51 | 2.590743e-48 |
| MsG0880045097.01 | MsG0880045369.01 | 0.823541 | 1.310444e-53 | 1.131565e-50 |
| MsG0880045097.01 | MsG0880045385.01 | 0.830992 | 2.148826e-55 | 2.301246e-52 |
| MsG0880045097.01 | MsG0880045413.01 | 0.828560 | 8.399044e-55 | 8.378247e-52 |
| MsG0880045097.01 | MsG0880045414.01 | 0.813476 | 2.511102e-51 | 1.641595e-48 |
| MsG0880045097.01 | MsG0880045630.01 | 0.830181 | 3.394366e-55 | 3.549845e-52 |
| MsG0880045097.01 | MsG0880046219.01 | 0.826228 | 3.043396e-54 | 2.837198e-51 |
| MsG0880045097.01 | MsG0880046341.01 | 0.812182 | 4.821657e-51 | 3.044628e-48 |
| MsG0880045097.01 | MsG0880046469.01 | 0.853367 | 2.504654e-61 | 5.399090e-58 |
| MsG0880045097.01 | MsG0880047318.01 | 0.818572 | 1.828052e-52 | 1.373373e-49 |
| MsG0180003757.01 | MsG0880045097.01 | 0.834665 | 2.628440e-56 | 3.140187e-53 |
| MsG0180004124.01 | MsG0880045097.01 | 0.815837 | 7.532450e-52 | 5.250205e-49 |
| MsG0180004125.01 | MsG0880045097.01 | 0.814232 | 1.710929e-51 | 1.141623e-48 |
| MsG0180004322.01 | MsG0880045097.01 | 0.803448 | 3.468894e-49 | 1.743669e-46 |
| MsG0180004553.01 | MsG0880045097.01 | 0.813717 | 2.222314e-51 | 1.462335e-48 |
| MsG0180004586.01 | MsG0880045097.01 | 0.820333 | 7.250048e-53 | 5.719782e-50 |
| MsG0180005791.01 | MsG0880045097.01 | 0.817833 | 2.686466e-52 | 1.977771e-49 |
| MsG0180006212.01 | MsG0880045097.01 | 0.832053 | 1.177002e-55 | 1.300730e-52 |
| MsG0180006227.01 | MsG0880045097.01 | 0.815957 | 7.082353e-52 | 4.952813e-49 |
| MsG0280006452.01 | MsG0880045097.01 | 0.809189 | 2.139943e-50 | 1.248144e-47 |
| MsG0780040321.01 | MsG0880045097.01 | 0.809918 | 1.492043e-50 | 8.872271e-48 |
| MsG0780040429.01 | MsG0880045097.01 | 0.803386 | 3.574173e-49 | 1.793649e-46 |
| MsG0780040702.01 | MsG0880045097.01 | 0.804883 | 1.744052e-49 | 9.097233e-47 |
| MsG0780041121.01 | MsG0880045097.01 | 0.806897 | 6.579721e-50 | 3.613602e-47 |
| MsG0780041254.01 | MsG0880045097.01 | 0.804937 | 1.699730e-49 | 8.878040e-47 |
| MsG0780041620.01 | MsG0880045097.01 | 0.810081 | 1.376261e-50 | 8.218366e-48 |
| MsG0780041637.01 | MsG0880045097.01 | 0.813324 | 2.711870e-51 | 1.765496e-48 |
| MsG0780041720.01 | MsG0880045097.01 | 0.841519 | 4.524836e-58 | 6.665514e-55 |
| MsG0780041783.01 | MsG0880045097.01 | 0.840621 | 7.785435e-58 | 1.115285e-54 |
| MsG0880041855.01 | MsG0880045097.01 | 0.816111 | 6.545600e-52 | 4.596807e-49 |
| MsG0880042858.01 | MsG0880045097.01 | 0.834015 | 3.825834e-56 | 4.482831e-53 |
| MsG0880043069.01 | MsG0880045097.01 | 0.814241 | 1.703134e-51 | 1.136711e-48 |
| MsG0280010695.01 | MsG0880045097.01 | 0.806563 | 7.741192e-50 | 4.215161e-47 |
| MsG0280010780.01 | MsG0880045097.01 | 0.850509 | 1.621336e-60 | 3.182974e-57 |
| MsG0280011301.01 | MsG0880045097.01 | 0.832655 | 8.352120e-56 | 9.396215e-53 |
| MsG0280011475.01 | MsG0880045097.01 | 0.800115 | 1.677039e-48 | 7.744754e-46 |
| MsG0380012281.01 | MsG0880045097.01 | 0.802651 | 5.069915e-49 | 2.496955e-46 |
| MsG0380013114.01 | MsG0880045097.01 | 0.822681 | 2.080071e-53 | 1.753133e-50 |
| MsG0380013448.01 | MsG0880045097.01 | 0.845511 | 3.879303e-59 | 6.480081e-56 |
| MsG0380013473.01 | MsG0880045097.01 | 0.838322 | 3.080636e-57 | 4.111217e-54 |
| MsG0380013506.01 | MsG0880045097.01 | 0.801981 | 6.966399e-49 | 3.372819e-46 |
| MsG0380013888.01 | MsG0880045097.01 | 0.847613 | 1.035376e-59 | 1.850535e-56 |
| MsG0380013892.01 | MsG0880045097.01 | 0.802309 | 5.962899e-49 | 2.911542e-46 |
| MsG0380013919.01 | MsG0880045097.01 | 0.808741 | 2.667915e-50 | 1.537492e-47 |
| MsG0380013921.01 | MsG0880045097.01 | 0.858278 | 9.194724e-63 | 2.334105e-59 |
| MsG0380013925.01 | MsG0880045097.01 | 0.821340 | 4.253957e-53 | 3.451406e-50 |
| MsG0380013926.01 | MsG0880045097.01 | 0.867361 | 1.448102e-65 | 5.042563e-62 |
| MsG0380013928.01 | MsG0880045097.01 | 0.870944 | 9.950648e-67 | 3.942377e-63 |
| MsG0380013929.01 | MsG0880045097.01 | 0.807219 | 5.623939e-50 | 3.114752e-47 |
| MsG0380013931.01 | MsG0880045097.01 | 0.819170 | 1.336751e-52 | 1.021018e-49 |
| MsG0380013940.01 | MsG0880045097.01 | 0.877461 | 6.168944e-69 | 3.104508e-65 |
| MsG0380013941.01 | MsG0880045097.01 | 0.861759 | 8.185051e-64 | 2.340678e-60 |
| MsG0380013942.01 | MsG0880045097.01 | 0.813030 | 3.145836e-51 | 2.031713e-48 |
| MsG0380013943.01 | MsG0880045097.01 | 0.877694 | 5.117159e-69 | 2.597912e-65 |
| MsG0380013945.01 | MsG0880045097.01 | 0.883665 | 3.702547e-71 | 2.369765e-67 |
| MsG0380013951.01 | MsG0880045097.01 | 0.820812 | 5.626612e-53 | 4.498629e-50 |
| MsG0380013952.01 | MsG0880045097.01 | 0.804663 | 1.939328e-49 | 1.005739e-46 |
| MsG0380013953.01 | MsG0880045097.01 | 0.856911 | 2.335284e-62 | 5.661999e-59 |
| MsG0380013954.01 | MsG0880045097.01 | 0.854968 | 8.640676e-62 | 1.963882e-58 |
| MsG0380013956.01 | MsG0880045097.01 | 0.867947 | 9.400029e-66 | 3.341123e-62 |
| MsG0380013957.01 | MsG0880045097.01 | 0.864818 | 9.248755e-65 | 2.942718e-61 |
| MsG0380013962.01 | MsG0880045097.01 | 0.830326 | 3.126937e-55 | 3.283810e-52 |
| MsG0380013966.01 | MsG0880045097.01 | 0.873162 | 1.820977e-67 | 7.824728e-64 |
| MsG0380013967.01 | MsG0880045097.01 | 0.867351 | 1.458693e-65 | 5.077283e-62 |
| MsG0380013968.01 | MsG0880045097.01 | 0.819600 | 1.066503e-52 | 8.244108e-50 |
| MsG0380013969.01 | MsG0880045097.01 | 0.802861 | 4.588069e-49 | 2.271855e-46 |
| MsG0380013971.01 | MsG0880045097.01 | 0.876631 | 1.197116e-68 | 5.845908e-65 |
| MsG0380013975.01 | MsG0880045097.01 | 0.869586 | 2.771235e-66 | 1.045519e-62 |
| MsG0380013976.01 | MsG0880045097.01 | 0.805245 | 1.465047e-49 | 7.712400e-47 |
| MsG0380013977.01 | MsG0880045097.01 | 0.873396 | 1.518554e-67 | 6.580495e-64 |
| MsG0380013986.01 | MsG0880045097.01 | 0.800626 | 1.319227e-48 | 6.172097e-46 |
| MsG0380013997.01 | MsG0880045097.01 | 0.804440 | 2.158030e-49 | 1.112712e-46 |
| MsG0380013999.01 | MsG0880045097.01 | 0.855580 | 5.735796e-62 | 1.330437e-58 |
| MsG0380014004.01 | MsG0880045097.01 | 0.850758 | 1.380711e-60 | 2.733069e-57 |
| MsG0380014005.01 | MsG0880045097.01 | 0.884647 | 1.603799e-71 | 1.066742e-67 |
| MsG0380014006.01 | MsG0880045097.01 | 0.849962 | 2.308062e-60 | 4.451352e-57 |
| MsG0380014016.01 | MsG0880045097.01 | 0.808746 | 2.662304e-50 | 1.534486e-47 |
| MsG0380014017.01 | MsG0880045097.01 | 0.859710 | 3.426702e-63 | 9.134480e-60 |
| MsG0380014018.01 | MsG0880045097.01 | 0.804716 | 1.890369e-49 | 9.817232e-47 |
| MsG0380014020.01 | MsG0880045097.01 | 0.855949 | 4.473325e-62 | 1.050568e-58 |
| MsG0380014021.01 | MsG0880045097.01 | 0.856163 | 3.872613e-62 | 9.158044e-59 |
| MsG0380014023.01 | MsG0880045097.01 | 0.850165 | 2.025059e-60 | 3.931628e-57 |
| MsG0380014024.01 | MsG0880045097.01 | 0.846757 | 1.776871e-59 | 3.090225e-56 |
| MsG0380014026.01 | MsG0880045097.01 | 0.869845 | 2.281875e-66 | 8.689046e-63 |
| MsG0380014029.01 | MsG0880045097.01 | 0.864956 | 8.371167e-65 | 2.676960e-61 |
| MsG0380014032.01 | MsG0880045097.01 | 0.881278 | 2.740717e-70 | 1.595655e-66 |
| MsG0380014033.01 | MsG0880045097.01 | 0.882678 | 8.513841e-71 | 5.233127e-67 |
| MsG0380014050.01 | MsG0880045097.01 | 0.813967 | 1.957510e-51 | 1.296820e-48 |
| MsG0380014129.01 | MsG0880045097.01 | 0.801210 | 1.002367e-48 | 4.759622e-46 |
| MsG0380014642.01 | MsG0880045097.01 | 0.800581 | 1.347434e-48 | 6.296975e-46 |
| MsG0380014735.01 | MsG0880045097.01 | 0.804350 | 2.253461e-49 | 1.159267e-46 |
| MsG0680031813.01 | MsG0880045097.01 | 0.829426 | 5.181776e-55 | 5.301659e-52 |
| MsG0680034229.01 | MsG0880045097.01 | 0.839700 | 1.354760e-57 | 1.885837e-54 |
| MsG0480018628.01 | MsG0880045097.01 | 0.828448 | 8.939921e-55 | 8.888908e-52 |
| MsG0480019861.01 | MsG0880045097.01 | 0.823676 | 1.218699e-53 | 1.056524e-50 |
| MsG0480020052.01 | MsG0880045097.01 | 0.810729 | 9.970835e-51 | 6.057421e-48 |
| MsG0480021205.01 | MsG0880045097.01 | 0.819496 | 1.126339e-52 | 8.681924e-50 |
| MsG0480021327.01 | MsG0880045097.01 | 0.849479 | 3.148720e-60 | 5.976653e-57 |
| MsG0480021331.01 | MsG0880045097.01 | 0.854697 | 1.035692e-61 | 2.332868e-58 |
| MsG0480021912.01 | MsG0880045097.01 | 0.808760 | 2.643044e-50 | 1.523969e-47 |
| MsG0480022591.01 | MsG0880045097.01 | 0.833766 | 4.415525e-56 | 5.135462e-53 |
| MsG0480022765.01 | MsG0880045097.01 | 0.822038 | 2.932949e-53 | 2.426885e-50 |
| MsG0480023152.01 | MsG0880045097.01 | 0.815363 | 9.604890e-52 | 6.608468e-49 |
| MsG0480023187.01 | MsG0880045097.01 | 0.811292 | 7.531409e-51 | 4.643829e-48 |
| MsG0480023217.01 | MsG0880045097.01 | 0.805346 | 1.395503e-49 | 7.365521e-47 |
| MsG0580024309.01 | MsG0880045097.01 | 0.836026 | 1.190928e-56 | 1.482222e-53 |
| MsG0580024493.01 | MsG0880045097.01 | 0.817492 | 3.206365e-52 | 2.338546e-49 |
| MsG0580024678.01 | MsG0880045097.01 | 0.805712 | 1.169422e-49 | 6.230958e-47 |
| MsG0580025830.01 | MsG0880045097.01 | 0.805583 | 1.244606e-49 | 6.609254e-47 |
| MsG0380015200.01 | MsG0880045097.01 | 0.801110 | 1.051028e-48 | 4.978127e-46 |
| MsG0380015201.01 | MsG0880045097.01 | 0.836859 | 7.310185e-57 | 9.329971e-54 |
| MsG0380015348.01 | MsG0880045097.01 | 0.844624 | 6.738801e-59 | 1.094316e-55 |
| MsG0380015439.01 | MsG0880045097.01 | 0.809808 | 1.575360e-50 | 9.340864e-48 |
| MsG0380015752.01 | MsG0880045097.01 | 0.820242 | 7.608228e-53 | 5.987297e-50 |
| MsG0380016424.01 | MsG0880045097.01 | 0.802958 | 4.382244e-49 | 2.175218e-46 |
| MsG0380016790.01 | MsG0880045097.01 | 0.823746 | 1.173206e-53 | 1.019142e-50 |
| MsG0380016835.01 | MsG0880045097.01 | 0.803936 | 2.747796e-49 | 1.398727e-46 |
| MsG0380016881.01 | MsG0880045097.01 | 0.814412 | 1.561007e-51 | 1.046759e-48 |
| MsG0380016889.01 | MsG0880045097.01 | 0.811237 | 7.741830e-51 | 4.766821e-48 |
| MsG0380016931.01 | MsG0880045097.01 | 0.825484 | 4.572320e-54 | 4.172877e-51 |
| MsG0380016934.01 | MsG0880045097.01 | 0.806942 | 6.437656e-50 | 3.539735e-47 |
| MsG0380016935.01 | MsG0880045097.01 | 0.824916 | 6.227692e-54 | 5.593097e-51 |
| MsG0380017007.01 | MsG0880045097.01 | 0.805443 | 1.331552e-49 | 7.045550e-47 |
| MsG0380017405.01 | MsG0880045097.01 | 0.845532 | 3.830402e-59 | 6.402564e-56 |
| MsG0380017406.01 | MsG0880045097.01 | 0.833766 | 4.415525e-56 | 5.135462e-53 |
| MsG0380017812.01 | MsG0880045097.01 | 0.805567 | 1.254285e-49 | 6.657667e-47 |
| MsG0380017904.01 | MsG0880045097.01 | 0.805906 | 1.064372e-49 | 5.699342e-47 |
| MsG0380017962.01 | MsG0880045097.01 | 0.828055 | 1.112038e-54 | 1.093078e-51 |
| MsG0480018296.01 | MsG0880045097.01 | 0.864476 | 1.182919e-64 | 3.719013e-61 |
| MsG0580027677.01 | MsG0880045097.01 | 0.881685 | 1.954638e-70 | 1.156217e-66 |
| MsG0580030197.01 | MsG0880045097.01 | 0.833956 | 3.958195e-56 | 4.630197e-53 |
| MsG0580030237.01 | MsG0880045097.01 | 0.815350 | 9.668500e-52 | 6.649986e-49 |
| MsG0680030439.01 | MsG0880045097.01 | 0.848456 | 6.059567e-60 | 1.112742e-56 |
| MsG0680030658.01 | MsG0880045097.01 | 0.807074 | 6.036333e-50 | 3.330381e-47 |
| MsG0280007649.01 | MsG0880045097.01 | 0.807976 | 3.885059e-50 | 2.194525e-47 |
| MsG0280007650.01 | MsG0880045097.01 | 0.804880 | 1.746745e-49 | 9.110527e-47 |
| MsG0280008820.01 | MsG0880045097.01 | 0.812353 | 4.425315e-51 | 2.807370e-48 |
| MsG0280009541.01 | MsG0880045097.01 | 0.805319 | 1.413956e-49 | 7.457669e-47 |
| MsG0280009742.01 | MsG0880045097.01 | 0.843332 | 1.495663e-58 | 2.332580e-55 |
| MsG0280009776.01 | MsG0880045097.01 | 0.818656 | 1.749689e-52 | 1.317512e-49 |
| MsG0280009864.01 | MsG0880045097.01 | 0.822583 | 2.192316e-53 | 1.842710e-50 |
| MsG0280010137.01 | MsG0880045097.01 | 0.808007 | 3.827188e-50 | 2.163565e-47 |
| MsG0280010142.01 | MsG0880045097.01 | 0.864855 | 9.000738e-65 | 2.867442e-61 |
| MsG0280010143.01 | MsG0880045097.01 | 0.859638 | 3.602428e-63 | 9.579356e-60 |
| MsG0280010144.01 | MsG0880045097.01 | 0.846600 | 1.961719e-59 | 3.394377e-56 |
| MsG0280010145.01 | MsG0880045097.01 | 0.812526 | 4.054953e-51 | 2.584325e-48 |
| MsG0780036068.01 | MsG0880045097.01 | 0.805585 | 1.243393e-49 | 6.603121e-47 |
| MsG0780037698.01 | MsG0880045097.01 | 0.801663 | 8.098105e-49 | 3.889244e-46 |
| MsG0780038047.01 | MsG0880045097.01 | 0.842258 | 2.885563e-58 | 4.350502e-55 |
| MsG0780038197.01 | MsG0880045097.01 | 0.865258 | 6.728255e-65 | 2.175086e-61 |
| MsG0780038198.01 | MsG0880045097.01 | 0.816564 | 5.182113e-52 | 3.684625e-49 |
| MsG0780039821.01 | MsG0880045097.01 | 0.839189 | 1.838522e-57 | 2.519611e-54 |
| MsG0780039836.01 | MsG0880045097.01 | 0.829400 | 5.257228e-55 | 5.374982e-52 |
| MsG0780039838.01 | MsG0880045097.01 | 0.840287 | 9.524802e-58 | 1.350363e-54 |
| MsG0780039839.01 | MsG0880045097.01 | 0.825002 | 5.943471e-54 | 5.350972e-51 |
| MsG0780040121.01 | MsG0880045097.01 | 0.836819 | 7.484614e-57 | 9.540826e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045097.01.T04 | MTR_2g076050 | 92.593 | 27 | 2 | 0 | 1 | 27 | 1 | 27 | 1.34e-12 | 55.1 |
| MsG0880045097.01.T01 | MTR_2g076050 | 94.286 | 35 | 2 | 0 | 13 | 47 | 26 | 60 | 1.34e-17 | 69.7 |
| MsG0880045097.01.T02 | MTR_0002s0700 | 95.833 | 72 | 3 | 0 | 1 | 72 | 12 | 83 | 1.36e-45 | 140 |
| MsG0880045097.01.T02 | MTR_4g050850 | 97.143 | 70 | 2 | 0 | 1 | 70 | 12 | 81 | 3.87e-44 | 138 |
| MsG0880045097.01.T02 | MTR_5g055290 | 96.923 | 65 | 2 | 0 | 1 | 65 | 12 | 76 | 3.05e-40 | 127 |
| MsG0880045097.01.T02 | MTR_6g007780 | 92.105 | 38 | 3 | 0 | 13 | 50 | 75 | 112 | 6.59e-19 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045097.01.T04 | ATCG00570 | 97.436 | 39 | 1 | 0 | 1 | 39 | 1 | 39 | 4.57e-22 | 78.6 |
| MsG0880045097.01.T02 | ATCG00580 | 95.833 | 72 | 3 | 0 | 1 | 72 | 12 | 83 | 8.23e-46 | 141 |
Find 32 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTAGCTTACGATGTATT+TGG | 0.244623 | 8:-54164216 | MsG0880045097.01.T02:CDS |
| CGAATACTGGTAATAATATC+AGG | 0.301237 | 8:+54164306 | None:intergenic |
| TCAAAACGGCCAGTTATTAA+TGG | 0.307608 | 8:+54164147 | None:intergenic |
| GTAGCTCTATAATTCGGATT+AGG | 0.338134 | 8:+54163954 | None:intergenic |
| ATAACCAACCCGCAATGAAT+AGG | 0.348030 | 8:+54164250 | None:intergenic |
| TTATTACCAGTATTCGATAC+TGG | 0.348418 | 8:-54164299 | MsG0880045097.01.T02:CDS |
| ATACCCTCCCTATTCATTGC+GGG | 0.391873 | 8:-54164258 | MsG0880045097.01.T02:CDS |
| CTTTCTGTAAAATACTCGTT+TGG | 0.393697 | 8:+54164183 | None:intergenic |
| TAACCAACCCGCAATGAATA+GGG | 0.406851 | 8:+54164251 | None:intergenic |
| TGAATCGTACCAGTCTCTAC+TGG | 0.407751 | 8:-54163897 | MsG0880045097.01.T01:CDS |
| CAAGGAATTCCATTAATAAC+TGG | 0.412082 | 8:-54164156 | MsG0880045097.01.T02:CDS |
| TGTGTCGTAGCTCTATAATT+CGG | 0.415726 | 8:+54163948 | None:intergenic |
| AATAATCCAGTATCGAATAC+TGG | 0.423687 | 8:+54164293 | None:intergenic |
| TTATTAATGGAATTCCTTGT+CGG | 0.434610 | 8:+54164160 | None:intergenic |
| AATGGGATAGGTCCTATCTA+TGG | 0.452739 | 8:+54164071 | None:intergenic |
| AGGCTCTAATGACCATAGAT+AGG | 0.488577 | 8:-54164083 | None:intergenic |
| GTAAAATACTCGTTTGGAAG+GGG | 0.495265 | 8:+54164189 | None:intergenic |
| CTGTAAAATACTCGTTTGGA+AGG | 0.503673 | 8:+54164187 | None:intergenic |
| ATTCGGATTAGGTTTATCGT+TGG | 0.512045 | 8:+54163965 | None:intergenic |
| GTACGATGGTTGGCTGTTCA+CGG | 0.514822 | 8:-54164042 | MsG0880045097.01.T04:CDS |
| GAATCGTACCAGTCTCTACT+GGG | 0.521784 | 8:-54163896 | MsG0880045097.01.T01:CDS |
| GGTTGGTTATTTGTCAGCAC+GGG | 0.523918 | 8:-54164237 | MsG0880045097.01.T02:CDS |
| GGGTTGGTTATTTGTCAGCA+CGG | 0.532372 | 8:-54164238 | MsG0880045097.01.T02:CDS |
| TGTAAAATACTCGTTTGGAA+GGG | 0.534074 | 8:+54164188 | None:intergenic |
| CCTCCCTATTCATTGCGGGT+TGG | 0.536548 | 8:-54164254 | MsG0880045097.01.T02:CDS |
| GTTGTTCCAAAGAATCAAAA+CGG | 0.551629 | 8:+54164133 | None:intergenic |
| TAATAAACCCCAGTAGAGAC+TGG | 0.572062 | 8:+54163888 | None:intergenic |
| TATACCCTCCCTATTCATTG+CGG | 0.586067 | 8:-54164259 | MsG0880045097.01.T02:CDS |
| GTTGGCTGTTCACGGACTAG+CGG | 0.657866 | 8:-54164034 | MsG0880045097.01.T01:CDS |
| CAACCCGCAATGAATAGGGA+GGG | 0.665638 | 8:+54164255 | None:intergenic |
| CCAACCCGCAATGAATAGGG+AGG | 0.678708 | 8:+54164254 | None:intergenic |
| AATCGTACCAGTCTCTACTG+GGG | 0.739139 | 8:-54163895 | MsG0880045097.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATATATATATATT+AGG | - | Chr8:54164304-54164323 | MsG0880045097.01.T02:CDS | 0.0% |
| !! | TATTGATCCCAAAAAAAAAA+CGG | + | Chr8:54164106-54164125 | None:intergenic | 20.0% |
| !!! | ATTCAACATTTTGTTCATTT+GGG | + | Chr8:54164192-54164211 | None:intergenic | 20.0% |
| !!! | TGAATTTAGTAGATCTTTTT+AGG | - | Chr8:54164002-54164021 | MsG0880045097.01.T01:CDS | 20.0% |
| ! | TTATTAATGGAATTCCTTGT+CGG | + | Chr8:54163951-54163970 | None:intergenic | 25.0% |
| !! | CATTCAACATTTTGTTCATT+TGG | + | Chr8:54164193-54164212 | None:intergenic | 25.0% |
| !!! | ATTTAGTAGATCTTTTTAGG+AGG | - | Chr8:54164005-54164024 | MsG0880045097.01.T01:CDS | 25.0% |
| AACCATCGTACTGTAAAAAT+GGG | + | Chr8:54164057-54164076 | None:intergenic | 30.0% | |
| CAAGGAATTCCATTAATAAC+TGG | - | Chr8:54163952-54163971 | MsG0880045097.01.T01:CDS | 30.0% | |
| CTTTCTGTAAAATACTCGTT+TGG | + | Chr8:54163928-54163947 | None:intergenic | 30.0% | |
| GTTGTTCCAAAGAATCAAAA+CGG | + | Chr8:54163978-54163997 | None:intergenic | 30.0% | |
| TGTAAAATACTCGTTTGGAA+GGG | + | Chr8:54163923-54163942 | None:intergenic | 30.0% | |
| TTATTACCAGTATTCGATAC+TGG | - | Chr8:54163809-54163828 | MsG0880045097.01.T01:CDS | 30.0% | |
| ! | AATAATCCAGTATCGAATAC+TGG | + | Chr8:54163818-54163837 | None:intergenic | 30.0% |
| CAACCATCGTACTGTAAAAA+TGG | + | Chr8:54164058-54164077 | None:intergenic | 35.0% | |
| CTGTAAAATACTCGTTTGGA+AGG | + | Chr8:54163924-54163943 | None:intergenic | 35.0% | |
| GATCCCAAAAAAAAAACGGT+GGG | + | Chr8:54164102-54164121 | None:intergenic | 35.0% | |
| GTAAAATACTCGTTTGGAAG+GGG | + | Chr8:54163922-54163941 | None:intergenic | 35.0% | |
| TCAAAACGGCCAGTTATTAA+TGG | + | Chr8:54163964-54163983 | None:intergenic | 35.0% | |
| TCGTACTGTAAAAATGGGAT+AGG | + | Chr8:54164052-54164071 | None:intergenic | 35.0% | |
| TGATCCCAAAAAAAAAACGG+TGG | + | Chr8:54164103-54164122 | None:intergenic | 35.0% | |
| ! | ATTCGGATTAGGTTTATCGT+TGG | + | Chr8:54164146-54164165 | None:intergenic | 35.0% |
| ! | CATTTTTACAGTACGATGGT+TGG | - | Chr8:54164056-54164075 | MsG0880045097.01.T04:CDS | 35.0% |
| ! | GGTTTAGCTTACGATGTATT+TGG | - | Chr8:54163892-54163911 | MsG0880045097.01.T01:CDS | 35.0% |
| ! | GTAGCTCTATAATTCGGATT+AGG | + | Chr8:54164157-54164176 | None:intergenic | 35.0% |
| ! | TATTTTACAGAAAGCCGACA+AGG | - | Chr8:54163934-54163953 | MsG0880045097.01.T01:CDS | 35.0% |
| ! | TGTGTCGTAGCTCTATAATT+CGG | + | Chr8:54164163-54164182 | None:intergenic | 35.0% |
| !! | ATCCCATTTTTACAGTACGA+TGG | - | Chr8:54164052-54164071 | MsG0880045097.01.T04:CDS | 35.0% |
| !!! | GTACCCACCGTTTTTTTTTT+GGG | - | Chr8:54164096-54164115 | None:intergenic | 35.0% |
| AATGGGATAGGTCCTATCTA+TGG | + | Chr8:54164040-54164059 | None:intergenic | 40.0% | |
| ATAACCAACCCGCAATGAAT+AGG | + | Chr8:54163861-54163880 | None:intergenic | 40.0% | |
| TAACCAACCCGCAATGAATA+GGG | + | Chr8:54163860-54163879 | None:intergenic | 40.0% | |
| TAATAAACCCCAGTAGAGAC+TGG | + | Chr8:54164223-54164242 | None:intergenic | 40.0% | |
| TATACCCTCCCTATTCATTG+CGG | - | Chr8:54163849-54163868 | MsG0880045097.01.T01:CDS | 40.0% | |
| ! | AGGCTCTAATGACCATAGAT+AGG | - | Chr8:54164025-54164044 | MsG0880045097.01.T01:CDS | 40.0% |
| !!! | AACTGGCCGTTTTGATTCTT+TGG | - | Chr8:54163969-54163988 | MsG0880045097.01.T01:CDS | 40.0% |
| !!! | GGTACCCACCGTTTTTTTTT+TGG | - | Chr8:54164095-54164114 | None:intergenic | 40.0% |
| AATCGTACCAGTCTCTACTG+GGG | - | Chr8:54164213-54164232 | MsG0880045097.01.T02:CDS | 45.0% | |
| ATACCCTCCCTATTCATTGC+GGG | - | Chr8:54163850-54163869 | MsG0880045097.01.T01:CDS | 45.0% | |
| GAATCGTACCAGTCTCTACT+GGG | - | Chr8:54164212-54164231 | MsG0880045097.01.T02:CDS | 45.0% | |
| TGAATCGTACCAGTCTCTAC+TGG | - | Chr8:54164211-54164230 | MsG0880045097.01.T02:CDS | 45.0% | |
| ! | GGTTGGTTATTTGTCAGCAC+GGG | - | Chr8:54163871-54163890 | MsG0880045097.01.T01:CDS | 45.0% |
| !! | GGGTTGGTTATTTGTCAGCA+CGG | - | Chr8:54163870-54163889 | MsG0880045097.01.T01:CDS | 45.0% |
| CAACCCGCAATGAATAGGGA+GGG | + | Chr8:54163856-54163875 | None:intergenic | 50.0% | |
| ! | GTACGATGGTTGGCTGTTCA+CGG | - | Chr8:54164066-54164085 | MsG0880045097.01.T04:CDS | 50.0% |
| CCAACCCGCAATGAATAGGG+AGG | + | Chr8:54163857-54163876 | None:intergenic | 55.0% | |
| CCTCCCTATTCATTGCGGGT+TGG | - | Chr8:54163854-54163873 | MsG0880045097.01.T01:CDS | 55.0% | |
| !! | GTTGGCTGTTCACGGACTAG+CGG | - | Chr8:54164074-54164093 | MsG0880045097.01.T04:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 54163805 | 54164325 | 54163805 | ID=MsG0880045097.01;Name=MsG0880045097.01 |
| Chr8 | mRNA | 54163805 | 54164059 | 54163805 | ID=MsG0880045097.01.T01;Parent=MsG0880045097.01;Name=MsG0880045097.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|84 |
| Chr8 | exon | 54163805 | 54164059 | 54163805 | ID=MsG0880045097.01.T01:exon:23391;Parent=MsG0880045097.01.T01 |
| Chr8 | CDS | 54163805 | 54164059 | 54163805 | ID=MsG0880045097.01.T01:cds;Parent=MsG0880045097.01.T01 |
| Chr8 | mRNA | 54164107 | 54164325 | 54164107 | ID=MsG0880045097.01.T02;Parent=MsG0880045097.01;Name=MsG0880045097.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|72 |
| Chr8 | exon | 54164107 | 54164325 | 54164107 | ID=MsG0880045097.01.T02:exon:23392;Parent=MsG0880045097.01.T02 |
| Chr8 | CDS | 54164107 | 54164325 | 54164107 | ID=MsG0880045097.01.T02:cds;Parent=MsG0880045097.01.T02 |
| Chr8 | mRNA | 54163805 | 54163936 | 54163805 | ID=MsG0880045097.01.T03;Parent=MsG0880045097.01;Name=MsG0880045097.01.T03;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|43 |
| Chr8 | exon | 54163805 | 54163936 | 54163805 | ID=MsG0880045097.01.T03:exon:23393;Parent=MsG0880045097.01.T03 |
| Chr8 | CDS | 54163805 | 54163936 | 54163805 | ID=MsG0880045097.01.T03:cds;Parent=MsG0880045097.01.T03 |
| Chr8 | mRNA | 54163978 | 54164097 | 54163978 | ID=MsG0880045097.01.T04;Parent=MsG0880045097.01;Name=MsG0880045097.01.T04;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|39 |
| Chr8 | exon | 54163978 | 54164097 | 54163978 | ID=MsG0880045097.01.T04:exon:23394;Parent=MsG0880045097.01.T04 |
| Chr8 | CDS | 54163978 | 54164097 | 54163978 | ID=MsG0880045097.01.T04:cds;Parent=MsG0880045097.01.T04 |
| Chr8 | mRNA | 54164163 | 54164225 | 54164163 | ID=MsG0880045097.01.T05;Parent=MsG0880045097.01;Name=MsG0880045097.01.T05;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|20 |
| Chr8 | exon | 54164163 | 54164225 | 54164163 | ID=MsG0880045097.01.T05:exon:23395;Parent=MsG0880045097.01.T05 |
| Chr8 | CDS | 54164163 | 54164225 | 54164163 | ID=MsG0880045097.01.T05:cds;Parent=MsG0880045097.01.T05 |
| Chr8 | mRNA | 54164097 | 54164129 | 54164097 | ID=MsG0880045097.01.T06;Parent=MsG0880045097.01;Name=MsG0880045097.01.T06;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|10 |
| Chr8 | exon | 54164097 | 54164129 | 54164097 | ID=MsG0880045097.01.T06:exon:23396;Parent=MsG0880045097.01.T06 |
| Chr8 | CDS | 54164097 | 54164129 | 54164097 | ID=MsG0880045097.01.T06:cds;Parent=MsG0880045097.01.T06 |
| Chr8 | mRNA | 54163978 | 54163998 | 54163978 | ID=MsG0880045097.01.T07;Parent=MsG0880045097.01;Name=MsG0880045097.01.T07;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|6 |
| Chr8 | exon | 54163978 | 54163998 | 54163978 | ID=MsG0880045097.01.T07:exon:23397;Parent=MsG0880045097.01.T07 |
| Chr8 | CDS | 54163978 | 54163998 | 54163978 | ID=MsG0880045097.01.T07:cds;Parent=MsG0880045097.01.T07 |
| Gene Sequence |
| Protein sequence |
