Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017972.01.T01 | XP_003603866.1 | 97.656 | 256 | 6 | 0 | 25 | 280 | 73 | 328 | 0 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017972.01.T01 | Q8GWA7 | 66.055 | 218 | 69 | 4 | 37 | 249 | 119 | 336 | 2.14E-102 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017972.01.T01 | G7J6F8 | 97.656 | 256 | 6 | 0 | 25 | 280 | 73 | 328 | 0.0 | 515 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380017972.01 | 0.800195 | 1.615298e-48 | 7.474772e-46 |
| MsG0080048059.01 | MsG0380017972.01 | 0.805406 | 1.355433e-49 | 7.165206e-47 |
| MsG0080048697.01 | MsG0380017972.01 | 0.812366 | 4.395065e-51 | 2.789151e-48 |
| MsG0080048978.01 | MsG0380017972.01 | 0.820454 | 6.800086e-53 | 5.383191e-50 |
| MsG0080049015.01 | MsG0380017972.01 | 0.853766 | 1.923721e-61 | 4.201896e-58 |
| MsG0080049019.01 | MsG0380017972.01 | 0.802697 | 4.960329e-49 | 2.445954e-46 |
| MsG0080049038.01 | MsG0380017972.01 | 0.816176 | 6.328964e-52 | 4.452617e-49 |
| MsG0080049066.01 | MsG0380017972.01 | 0.819579 | 1.078485e-52 | 8.332237e-50 |
| MsG0180000194.01 | MsG0380017972.01 | 0.813207 | 2.876174e-51 | 1.866398e-48 |
| MsG0180000467.01 | MsG0380017972.01 | 0.813730 | 2.208182e-51 | 1.453509e-48 |
| MsG0180001111.01 | MsG0380017972.01 | 0.811175 | 7.985555e-51 | 4.908809e-48 |
| MsG0180001264.01 | MsG0380017972.01 | -0.808884 | 2.487308e-50 | 1.438830e-47 |
| MsG0180001614.01 | MsG0380017972.01 | 0.842881 | 1.971590e-58 | 3.030814e-55 |
| MsG0180002808.01 | MsG0380017972.01 | -0.800783 | 1.225446e-48 | 5.756008e-46 |
| MsG0180003324.01 | MsG0380017972.01 | 0.817530 | 3.144111e-52 | 2.295424e-49 |
| MsG0180003757.01 | MsG0380017972.01 | 0.823020 | 1.734235e-53 | 1.475792e-50 |
| MsG0180003759.01 | MsG0380017972.01 | 0.810758 | 9.830886e-51 | 5.976935e-48 |
| MsG0180003779.01 | MsG0380017972.01 | 0.839794 | 1.280069e-57 | 1.787213e-54 |
| MsG0180003904.01 | MsG0380017972.01 | 0.812812 | 3.511712e-51 | 2.254707e-48 |
| MsG0180003908.01 | MsG0380017972.01 | 0.817165 | 3.799363e-52 | 2.746253e-49 |
| MsG0180003985.01 | MsG0380017972.01 | 0.818972 | 1.482825e-52 | 1.126564e-49 |
| MsG0180004177.01 | MsG0380017972.01 | 0.822089 | 2.854251e-53 | 2.365240e-50 |
| MsG0180004292.01 | MsG0380017972.01 | 0.806884 | 6.623134e-50 | 3.636296e-47 |
| MsG0180004322.01 | MsG0380017972.01 | 0.816539 | 5.248350e-52 | 3.729084e-49 |
| MsG0180004507.01 | MsG0380017972.01 | 0.811034 | 8.568024e-51 | 5.247614e-48 |
| MsG0180004553.01 | MsG0380017972.01 | 0.805370 | 1.379536e-49 | 7.285638e-47 |
| MsG0180004957.01 | MsG0380017972.01 | 0.803918 | 2.771924e-49 | 1.410329e-46 |
| MsG0180005291.01 | MsG0380017972.01 | 0.817051 | 4.028911e-52 | 2.903239e-49 |
| MsG0180005369.01 | MsG0380017972.01 | 0.800586 | 1.344256e-48 | 6.282787e-46 |
| MsG0180005817.01 | MsG0380017972.01 | 0.831141 | 1.975143e-55 | 2.124504e-52 |
| MsG0180005848.01 | MsG0380017972.01 | 0.810288 | 1.241849e-50 | 7.455877e-48 |
| MsG0180006212.01 | MsG0380017972.01 | 0.828689 | 7.820036e-55 | 7.829497e-52 |
| MsG0280006336.01 | MsG0380017972.01 | 0.810867 | 9.308575e-51 | 5.675961e-48 |
| MsG0280010704.01 | MsG0380017972.01 | 0.817018 | 4.097955e-52 | 2.950390e-49 |
| MsG0280011200.01 | MsG0380017972.01 | 0.804730 | 1.877445e-49 | 9.754040e-47 |
| MsG0280011299.01 | MsG0380017972.01 | 0.827953 | 1.176554e-54 | 1.153061e-51 |
| MsG0280011301.01 | MsG0380017972.01 | 0.835436 | 1.680365e-56 | 2.054671e-53 |
| MsG0280011475.01 | MsG0380017972.01 | 0.833863 | 4.177711e-56 | 4.873112e-53 |
| MsG0380012065.01 | MsG0380017972.01 | 0.806940 | 6.443000e-50 | 3.542521e-47 |
| MsG0380012281.01 | MsG0380017972.01 | 0.869142 | 3.862734e-66 | 1.434138e-62 |
| MsG0380013278.01 | MsG0380017972.01 | -0.800186 | 1.621651e-48 | 7.502683e-46 |
| MsG0380013378.01 | MsG0380017972.01 | 0.805467 | 1.316448e-49 | 6.969952e-47 |
| MsG0380013473.01 | MsG0380017972.01 | 0.815753 | 7.866554e-52 | 5.470902e-49 |
| MsG0380013506.01 | MsG0380017972.01 | 0.808463 | 3.059191e-50 | 1.750368e-47 |
| MsG0380013925.01 | MsG0380017972.01 | 0.823167 | 1.602265e-53 | 1.369103e-50 |
| MsG0380013956.01 | MsG0380017972.01 | 0.811027 | 8.594983e-51 | 5.263320e-48 |
| MsG0380014017.01 | MsG0380017972.01 | 0.805686 | 1.184207e-49 | 6.305387e-47 |
| MsG0380014024.01 | MsG0380017972.01 | 0.817063 | 4.004312e-52 | 2.886424e-49 |
| MsG0380015111.01 | MsG0380017972.01 | 0.826671 | 2.386971e-54 | 2.253486e-51 |
| MsG0380015201.01 | MsG0380017972.01 | 0.834361 | 3.133856e-56 | 3.710509e-53 |
| MsG0380015271.01 | MsG0380017972.01 | 0.830783 | 2.417501e-55 | 2.573053e-52 |
| MsG0380015439.01 | MsG0380017972.01 | 0.803724 | 3.041345e-49 | 1.539581e-46 |
| MsG0380015530.01 | MsG0380017972.01 | 0.824215 | 9.106811e-54 | 8.015282e-51 |
| MsG0380015619.01 | MsG0380017972.01 | 0.828472 | 8.821560e-55 | 8.777025e-52 |
| MsG0380015752.01 | MsG0380017972.01 | 0.812461 | 4.191656e-51 | 2.666872e-48 |
| MsG0380016229.01 | MsG0380017972.01 | 0.809707 | 1.656134e-50 | 9.793645e-48 |
| MsG0380016241.01 | MsG0380017972.01 | 0.802772 | 4.788209e-49 | 2.365597e-46 |
| MsG0380016362.01 | MsG0380017972.01 | 0.841301 | 5.163544e-58 | 7.553995e-55 |
| MsG0380016424.01 | MsG0380017972.01 | 0.803011 | 4.273041e-49 | 2.123758e-46 |
| MsG0380016456.01 | MsG0380017972.01 | 0.807077 | 6.028775e-50 | 3.326405e-47 |
| MsG0380016790.01 | MsG0380017972.01 | 0.830492 | 2.848419e-55 | 3.005601e-52 |
| MsG0380016835.01 | MsG0380017972.01 | 0.832959 | 7.019544e-56 | 7.968925e-53 |
| MsG0380016931.01 | MsG0380017972.01 | 0.837864 | 4.041756e-57 | 5.319674e-54 |
| MsG0380016934.01 | MsG0380017972.01 | 0.813571 | 2.392391e-51 | 1.567988e-48 |
| MsG0380016935.01 | MsG0380017972.01 | 0.808556 | 2.922220e-50 | 1.676012e-47 |
| MsG0380016960.01 | MsG0380017972.01 | 0.814522 | 1.476315e-51 | 9.928895e-49 |
| MsG0380017141.01 | MsG0380017972.01 | 0.842339 | 2.747471e-58 | 4.152924e-55 |
| MsG0380017405.01 | MsG0380017972.01 | 0.814871 | 1.235323e-51 | 8.385863e-49 |
| MsG0380017406.01 | MsG0380017972.01 | 0.815419 | 9.334831e-52 | 6.432469e-49 |
| MsG0380017472.01 | MsG0380017972.01 | 0.808905 | 2.461212e-50 | 1.424535e-47 |
| MsG0380017474.01 | MsG0380017972.01 | 0.805386 | 1.368679e-49 | 7.231227e-47 |
| MsG0380017566.01 | MsG0380017972.01 | 0.809650 | 1.703881e-50 | 1.006098e-47 |
| MsG0380017895.01 | MsG0380017972.01 | 0.828733 | 7.630445e-55 | 7.648905e-52 |
| MsG0380017962.01 | MsG0380017972.01 | 0.833158 | 6.260713e-56 | 7.150042e-53 |
| MsG0380017972.01 | MsG0380018072.01 | 0.830704 | 2.528182e-55 | 2.684607e-52 |
| MsG0380017972.01 | MsG0480018203.01 | 0.801163 | 1.024901e-48 | 4.860847e-46 |
| MsG0380017972.01 | MsG0480018626.01 | 0.833369 | 5.549121e-56 | 6.377523e-53 |
| MsG0380017972.01 | MsG0480019183.01 | 0.806467 | 8.111561e-50 | 4.406043e-47 |
| MsG0380017972.01 | MsG0480019376.01 | 0.809477 | 1.856125e-50 | 1.090888e-47 |
| MsG0380017972.01 | MsG0480019923.01 | -0.801690 | 7.992775e-49 | 3.841353e-46 |
| MsG0380017972.01 | MsG0480021205.01 | 0.806512 | 7.934880e-50 | 4.314979e-47 |
| MsG0380017972.01 | MsG0480021912.01 | 0.840068 | 1.086315e-57 | 1.529915e-54 |
| MsG0380017972.01 | MsG0480022295.01 | 0.823802 | 1.138392e-53 | 9.903942e-51 |
| MsG0380017972.01 | MsG0480022296.01 | 0.819147 | 1.352904e-52 | 1.032663e-49 |
| MsG0380017972.01 | MsG0480022837.01 | 0.808659 | 2.778335e-50 | 1.597692e-47 |
| MsG0380017972.01 | MsG0480023482.01 | 0.814558 | 1.449595e-51 | 9.758225e-49 |
| MsG0380017972.01 | MsG0480023749.01 | 0.807736 | 4.368678e-50 | 2.452279e-47 |
| MsG0380017972.01 | MsG0580024140.01 | 0.807654 | 4.547165e-50 | 2.546917e-47 |
| MsG0380017972.01 | MsG0580024309.01 | 0.849446 | 3.217498e-60 | 6.100764e-57 |
| MsG0380017972.01 | MsG0580024493.01 | 0.822777 | 1.975643e-53 | 1.669702e-50 |
| MsG0380017972.01 | MsG0580024571.01 | 0.814914 | 1.208606e-51 | 8.213954e-49 |
| MsG0380017972.01 | MsG0580024678.01 | 0.833150 | 6.292433e-56 | 7.184565e-53 |
| MsG0380017972.01 | MsG0580025486.01 | 0.801700 | 7.957266e-49 | 3.825166e-46 |
| MsG0380017972.01 | MsG0580026073.01 | 0.807418 | 5.104969e-50 | 2.841906e-47 |
| MsG0380017972.01 | MsG0580027095.01 | 0.835701 | 1.439366e-56 | 1.774184e-53 |
| MsG0380017972.01 | MsG0580027325.01 | 0.807282 | 5.455442e-50 | 3.026353e-47 |
| MsG0380017972.01 | MsG0580028226.01 | 0.803289 | 3.742394e-49 | 1.873397e-46 |
| MsG0380017972.01 | MsG0580029177.01 | 0.815905 | 7.276123e-52 | 5.080841e-49 |
| MsG0380017972.01 | MsG0580030197.01 | 0.814541 | 1.461739e-51 | 9.835601e-49 |
| MsG0380017972.01 | MsG0680030439.01 | 0.811252 | 7.684822e-51 | 4.733602e-48 |
| MsG0380017972.01 | MsG0680030635.01 | 0.836748 | 7.802115e-57 | 9.924654e-54 |
| MsG0380017972.01 | MsG0680031813.01 | 0.817633 | 2.980013e-52 | 2.181792e-49 |
| MsG0380017972.01 | MsG0680034229.01 | 0.822488 | 2.305831e-53 | 1.932789e-50 |
| MsG0380017972.01 | MsG0680035841.01 | -0.805375 | 1.375785e-49 | 7.266965e-47 |
| MsG0380017972.01 | MsG0780036064.01 | 0.810312 | 1.227321e-50 | 7.373295e-48 |
| MsG0380017972.01 | MsG0780036068.01 | 0.815336 | 9.738167e-52 | 6.695362e-49 |
| MsG0380017972.01 | MsG0780036909.01 | 0.808050 | 3.746804e-50 | 2.120493e-47 |
| MsG0380017972.01 | MsG0780037698.01 | 0.801660 | 8.106348e-49 | 3.893002e-46 |
| MsG0380017972.01 | MsG0780038047.01 | 0.813422 | 2.580120e-51 | 1.684224e-48 |
| MsG0380017972.01 | MsG0780038496.01 | 0.812745 | 3.631895e-51 | 2.327991e-48 |
| MsG0380017972.01 | MsG0780039821.01 | 0.814220 | 1.721338e-51 | 1.148157e-48 |
| MsG0380017972.01 | MsG0780039836.01 | 0.817189 | 3.750963e-52 | 2.712999e-49 |
| MsG0380017972.01 | MsG0780039860.01 | 0.809609 | 1.739169e-50 | 1.025825e-47 |
| MsG0380017972.01 | MsG0780040121.01 | 0.841851 | 3.697202e-58 | 5.503103e-55 |
| MsG0380017972.01 | MsG0780040321.01 | 0.815278 | 1.003397e-51 | 6.887647e-49 |
| MsG0380017972.01 | MsG0780040685.01 | 0.816360 | 5.757250e-52 | 4.070818e-49 |
| MsG0380017972.01 | MsG0780040702.01 | 0.812779 | 3.570170e-51 | 2.290341e-48 |
| MsG0380017972.01 | MsG0780040804.01 | 0.824310 | 8.653023e-54 | 7.635557e-51 |
| MsG0380017972.01 | MsG0780040977.01 | -0.807954 | 3.927516e-50 | 2.217159e-47 |
| MsG0380017972.01 | MsG0780041007.01 | 0.860202 | 2.435271e-63 | 6.603740e-60 |
| MsG0380017972.01 | MsG0780041106.01 | 0.839939 | 1.173415e-57 | 1.645828e-54 |
| MsG0380017972.01 | MsG0780041121.01 | 0.803748 | 3.005773e-49 | 1.522570e-46 |
| MsG0380017972.01 | MsG0780041173.01 | 0.833691 | 4.610594e-56 | 5.349660e-53 |
| MsG0380017972.01 | MsG0780041254.01 | 0.835108 | 2.032440e-56 | 2.460697e-53 |
| MsG0380017972.01 | MsG0780041620.01 | 0.821914 | 3.133655e-53 | 2.583937e-50 |
| MsG0380017972.01 | MsG0780041720.01 | 0.837388 | 5.354266e-57 | 6.943620e-54 |
| MsG0380017972.01 | MsG0780041783.01 | 0.833115 | 6.417244e-56 | 7.320064e-53 |
| MsG0380017972.01 | MsG0780041809.01 | 0.800670 | 1.292797e-48 | 6.055124e-46 |
| MsG0380017972.01 | MsG0880041835.01 | 0.801637 | 8.197521e-49 | 3.934422e-46 |
| MsG0380017972.01 | MsG0880041855.01 | 0.826080 | 3.300226e-54 | 3.063554e-51 |
| MsG0380017972.01 | MsG0880041908.01 | 0.813557 | 2.409303e-51 | 1.578495e-48 |
| MsG0380017972.01 | MsG0880042500.01 | 0.802414 | 5.674668e-49 | 2.778135e-46 |
| MsG0380017972.01 | MsG0880042858.01 | 0.803040 | 4.214520e-49 | 2.096308e-46 |
| MsG0380017972.01 | MsG0880043069.01 | 0.808622 | 2.829613e-50 | 1.625562e-47 |
| MsG0380017972.01 | MsG0880043364.01 | -0.813458 | 2.533723e-51 | 1.655640e-48 |
| MsG0380017972.01 | MsG0880044312.01 | 0.807348 | 5.280577e-50 | 2.934360e-47 |
| MsG0380017972.01 | MsG0880044339.01 | 0.827025 | 1.964688e-54 | 1.873925e-51 |
| MsG0380017972.01 | MsG0880044352.01 | 0.806739 | 7.105449e-50 | 3.886581e-47 |
| MsG0380017972.01 | MsG0880044715.01 | 0.835679 | 1.458517e-56 | 1.796473e-53 |
| MsG0380017972.01 | MsG0880045188.01 | 0.833941 | 3.993944e-56 | 4.669966e-53 |
| MsG0380017972.01 | MsG0880045385.01 | 0.813206 | 2.878006e-51 | 1.867524e-48 |
| MsG0380017972.01 | MsG0880045413.01 | 0.831570 | 1.548612e-55 | 1.687283e-52 |
| MsG0380017972.01 | MsG0880045778.01 | 0.807283 | 5.452091e-50 | 3.024573e-47 |
| MsG0380017972.01 | MsG0880045968.01 | 0.813981 | 1.943910e-51 | 1.288211e-48 |
| MsG0380017972.01 | MsG0880046040.01 | 0.814492 | 1.498777e-51 | 1.007185e-48 |
| MsG0380017972.01 | MsG0880046151.01 | 0.814025 | 1.900876e-51 | 1.261258e-48 |
| MsG0380017972.01 | MsG0880046167.01 | 0.821861 | 3.223277e-53 | 2.653965e-50 |
| MsG0380017972.01 | MsG0880046219.01 | 0.807578 | 4.721214e-50 | 2.639033e-47 |
| MsG0380017972.01 | MsG0880046469.01 | 0.822672 | 2.089637e-53 | 1.760774e-50 |
| MsG0380017972.01 | MsG0880046838.01 | 0.801240 | 9.884691e-49 | 4.697141e-46 |
| MsG0380017972.01 | MsG0880046876.01 | 0.800978 | 1.118116e-48 | 5.278515e-46 |
| MsG0380017972.01 | MsG0880047318.01 | 0.849756 | 2.635651e-60 | 5.048428e-57 |
| MsG0380017972.01 | MsG0880047628.01 | 0.818728 | 1.684293e-52 | 1.270871e-49 |
| MsG0380017972.01 | MsG0880047661.01 | 0.809316 | 2.010011e-50 | 1.176283e-47 |
| MsG0280007136.01 | MsG0380017972.01 | 0.806948 | 6.419332e-50 | 3.530162e-47 |
| MsG0280007233.01 | MsG0380017972.01 | 0.805812 | 1.114226e-49 | 5.951854e-47 |
| MsG0280007649.01 | MsG0380017972.01 | 0.804060 | 2.589366e-49 | 1.322238e-46 |
| MsG0280007650.01 | MsG0380017972.01 | 0.800249 | 1.574831e-48 | 7.297658e-46 |
| MsG0280009094.01 | MsG0380017972.01 | 0.812177 | 4.834321e-51 | 3.052191e-48 |
| MsG0280009167.01 | MsG0380017972.01 | -0.816234 | 6.143764e-52 | 4.329083e-49 |
| MsG0280009742.01 | MsG0380017972.01 | 0.811995 | 5.297541e-51 | 3.328017e-48 |
| MsG0280009776.01 | MsG0380017972.01 | 0.809119 | 2.214684e-50 | 1.289314e-47 |
| MsG0280010143.01 | MsG0380017972.01 | 0.826279 | 2.959404e-54 | 2.762902e-51 |
| MsG0280010144.01 | MsG0380017972.01 | 0.805029 | 1.626219e-49 | 8.513295e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017972.01.T01 | MTR_3g116050 | 97.656 | 256 | 6 | 0 | 25 | 280 | 73 | 328 | 0.0 | 515 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017972.01.T01 | AT1G20830 | 66.055 | 218 | 69 | 4 | 37 | 249 | 20 | 237 | 1.67e-104 | 304 |
| MsG0380017972.01.T01 | AT1G20830 | 66.055 | 218 | 69 | 4 | 37 | 249 | 119 | 336 | 2.18e-103 | 305 |
Find 76 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTGTTGCTGTTGTAATTT+TGG | 0.111441 | 3:+102744332 | MsG0380017972.01.T01:CDS |
| ATCATGGGGCCTTGAAGTTT+TGG | 0.266399 | 3:-102742869 | None:intergenic |
| TTGGGAGCAATTTACCGATT+TGG | 0.287214 | 3:+102744307 | MsG0380017972.01.T01:CDS |
| TTTAGGCAGGCTATAAATTT+CGG | 0.311174 | 3:+102746451 | MsG0380017972.01.T01:three_prime_UTR |
| GGGAAACTCCTAATGAAATC+TGG | 0.319923 | 3:-102746601 | None:intergenic |
| TGGGAGCAATTTACCGATTT+GGG | 0.323263 | 3:+102744308 | MsG0380017972.01.T01:CDS |
| GCTGTTACCCAGATTTCATT+AGG | 0.345285 | 3:+102746593 | MsG0380017972.01.T01:three_prime_UTR |
| GGGCTTCAAGCTTTCTCTGC+AGG | 0.352570 | 3:-102745567 | None:intergenic |
| TCAAATTCTTTAGCATTGAT+AGG | 0.353758 | 3:-102746265 | None:intergenic |
| GATGCACTTCCAAAGTTATT+CGG | 0.363736 | 3:-102746388 | None:intergenic |
| GAAGAGCTCTTTAAACAATC+AGG | 0.385369 | 3:+102746330 | MsG0380017972.01.T01:CDS |
| CATGATATTGACGGCTCTAC+TGG | 0.389084 | 3:+102742886 | MsG0380017972.01.T01:CDS |
| TCCTCTTGAGTAAGTGTGAC+AGG | 0.397039 | 3:-102745313 | None:intergenic |
| AGATGTGTGGAAAGGTTTAC+CGG | 0.414408 | 3:+102745284 | MsG0380017972.01.T01:CDS |
| GACAGCAGGCCGAATAACTT+TGG | 0.423013 | 3:+102746379 | MsG0380017972.01.T01:CDS |
| GCAACCACCTCTACAGATAT+CGG | 0.441091 | 3:+102745472 | MsG0380017972.01.T01:CDS |
| CACACTTACTCAAGAGGAAC+AGG | 0.447227 | 3:+102745318 | MsG0380017972.01.T01:CDS |
| TTTGGAAGTGCATCATCATC+TGG | 0.449415 | 3:+102746397 | MsG0380017972.01.T01:CDS |
| TAAGTGTGACAGGGGCTAAC+CGG | 0.458683 | 3:-102745303 | None:intergenic |
| CAGTAGAGCCGTCAATATCA+TGG | 0.462033 | 3:-102742885 | None:intergenic |
| GGCTTCAAGCTTTCTCTGCA+GGG | 0.469067 | 3:-102745566 | None:intergenic |
| ATCTGTAGAGGTGGTTGCAA+AGG | 0.470698 | 3:-102745467 | None:intergenic |
| GAACTGAGTCTCCTTCCTTA+AGG | 0.471097 | 3:-102745396 | None:intergenic |
| GGGCTGGGGCCAAAACTTCA+AGG | 0.474257 | 3:+102742860 | MsG0380017972.01.T01:CDS |
| TGTAGACTAATCGAAACATT+GGG | 0.478399 | 3:+102744289 | MsG0380017972.01.T01:intron |
| ATTGTATCGGGATCAACATC+TGG | 0.478900 | 3:-102745421 | None:intergenic |
| ACAGCAACACAGACCCAAAT+CGG | 0.483257 | 3:-102744321 | None:intergenic |
| CCTCATGCTCAGCTTGAATA+CGG | 0.491562 | 3:-102745543 | None:intergenic |
| GGAAACTCCTAATGAAATCT+GGG | 0.501084 | 3:-102746600 | None:intergenic |
| ATGTTGATCCCGATACAATC+AGG | 0.507636 | 3:+102745425 | MsG0380017972.01.T01:CDS |
| GGAATCCACCTGATTGTATC+GGG | 0.511366 | 3:-102745433 | None:intergenic |
| ACGCACGTGATCTCCTTCTC+TGG | 0.511994 | 3:-102745348 | None:intergenic |
| GTACTATTATCGGTGAGCAT+TGG | 0.513680 | 3:+102746507 | MsG0380017972.01.T01:three_prime_UTR |
| CATGATCATTTAATCTGCCA+TGG | 0.520486 | 3:-102746303 | None:intergenic |
| CCTCTTGAGTAAGTGTGACA+GGG | 0.528748 | 3:-102745312 | None:intergenic |
| ACAAGATCAGCTACGGAACC+AGG | 0.529125 | 3:-102744402 | None:intergenic |
| CGGCTCTACTGGCAAGGCAA+TGG | 0.530536 | 3:+102742897 | MsG0380017972.01.T01:CDS |
| AGGAATCCACCTGATTGTAT+CGG | 0.532431 | 3:-102745434 | None:intergenic |
| TCTCCTCAAAATTAGACAGC+AGG | 0.532874 | 3:+102746365 | MsG0380017972.01.T01:CDS |
| GTTGCAAAGGGATGATTCGC+AGG | 0.533369 | 3:-102745454 | None:intergenic |
| TTGTAGACTAATCGAAACAT+TGG | 0.537325 | 3:+102744288 | MsG0380017972.01.T01:intron |
| ACTGTCTATTTGTATAGCTA+AGG | 0.541900 | 3:+102746531 | MsG0380017972.01.T01:three_prime_UTR |
| AGTAGAGCCGTCAATATCAT+GGG | 0.542437 | 3:-102742884 | None:intergenic |
| AACAGGCGGTTCACCAGAGA+AGG | 0.544520 | 3:+102745335 | MsG0380017972.01.T01:CDS |
| TCAAGGCCCCATGATATTGA+CGG | 0.545206 | 3:+102742877 | MsG0380017972.01.T01:CDS |
| GGAGATCACGTGCGTATCAG+TGG | 0.548992 | 3:+102745356 | MsG0380017972.01.T01:CDS |
| TCTGTAGAGGTGGTTGCAAA+GGG | 0.561104 | 3:-102745466 | None:intergenic |
| CCCTGTCACACTTACTCAAG+AGG | 0.564938 | 3:+102745312 | MsG0380017972.01.T01:CDS |
| ATTCGATAATCCCTTGGTCA+AGG | 0.575622 | 3:+102745237 | MsG0380017972.01.T01:CDS |
| GAGAGACCATTCGACTCCCA+TGG | 0.588483 | 3:+102746286 | MsG0380017972.01.T01:CDS |
| AGATCCATTCGATAATCCCT+TGG | 0.593415 | 3:+102745231 | MsG0380017972.01.T01:CDS |
| TAGACGCGGTCAATTGAGAT+CGG | 0.593965 | 3:+102744425 | MsG0380017972.01.T01:CDS |
| CCGTATTCAAGCTGAGCATG+AGG | 0.599509 | 3:+102745543 | MsG0380017972.01.T01:CDS |
| CTCGCCGATATCTGTAGAGG+TGG | 0.601270 | 3:-102745476 | None:intergenic |
| TCTACTGGCAAGGCAATGGA+AGG | 0.603372 | 3:+102742901 | MsG0380017972.01.T01:CDS |
| AAGTGTAGAGATGTGTGGAA+AGG | 0.612784 | 3:+102745276 | MsG0380017972.01.T01:CDS |
| TGCTCAGCTTGAATACGGAA+AGG | 0.619175 | 3:-102745538 | None:intergenic |
| ATGATCATTTAATCTGCCAT+GGG | 0.621182 | 3:-102746302 | None:intergenic |
| TTGACCAAGGGATTATCGAA+TGG | 0.627921 | 3:-102745235 | None:intergenic |
| GTTAGTCTCGTAGCACGAAG+TGG | 0.633315 | 3:-102746622 | None:intergenic |
| TATTGACGGCTCTACTGGCA+AGG | 0.634073 | 3:+102742891 | MsG0380017972.01.T01:CDS |
| GCGTCTAACAAGATCAGCTA+CGG | 0.634159 | 3:-102744409 | None:intergenic |
| TTAGTCTCGTAGCACGAAGT+GGG | 0.634287 | 3:-102746621 | None:intergenic |
| GTCCTCGCCGATATCTGTAG+AGG | 0.664154 | 3:-102745479 | None:intergenic |
| TTGATCCCGATACAATCAGG+TGG | 0.673066 | 3:+102745428 | MsG0380017972.01.T01:CDS |
| CCTTCCTTAAGGAAAACTGT+GGG | 0.676647 | 3:-102745385 | None:intergenic |
| CTCTTGAGTAAGTGTGACAG+GGG | 0.681129 | 3:-102745311 | None:intergenic |
| TCCTTCCTTAAGGAAAACTG+TGG | 0.681803 | 3:-102745386 | None:intergenic |
| AAATCAAGTGTAGAGATGTG+TGG | 0.686378 | 3:+102745271 | MsG0380017972.01.T01:CDS |
| CAATTGAGATCGGATAGAAG+AGG | 0.688587 | 3:+102744435 | MsG0380017972.01.T01:CDS |
| GTATCGGGATCAACATCTGG+AGG | 0.693969 | 3:-102745418 | None:intergenic |
| GTAGCTGATCTTGTTAGACG+CGG | 0.705664 | 3:+102744411 | MsG0380017972.01.T01:CDS |
| GTAGAGCCGTCAATATCATG+GGG | 0.707143 | 3:-102742883 | None:intergenic |
| ACTTACTCAAGAGGAACAGG+CGG | 0.707329 | 3:+102745321 | MsG0380017972.01.T01:CDS |
| AATCTGCCATGGGAGTCGAA+TGG | 0.713980 | 3:-102746292 | None:intergenic |
| CACCTCTACAGATATCGGCG+AGG | 0.722742 | 3:+102745477 | MsG0380017972.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCTTGATTAAATTTAAAT+TGG | - | Chr3:102746158-102746177 | None:intergenic | 10.0% |
| !! | TAATAATATATATTACTACT+AGG | + | Chr3:102745108-102745127 | MsG0380017972.01.T01:intron | 10.0% |
| !!! | GATTGTTTTTTTTTTTTTTA+TGG | - | Chr3:102743172-102743191 | None:intergenic | 10.0% |
| !!! | TAAAAATTTTGTACTATTAT+CGG | + | Chr3:102746497-102746516 | MsG0380017972.01.T01:three_prime_UTR | 10.0% |
| !!! | TTTTCTTTTTTTATTAATAG+CGG | + | Chr3:102743551-102743570 | MsG0380017972.01.T01:intron | 10.0% |
| !! | TAAATTCATGTATATTTCTT+TGG | - | Chr3:102745082-102745101 | None:intergenic | 15.0% |
| !! | TGTCTGAATAAAAAAATTAA+TGG | + | Chr3:102745986-102746005 | MsG0380017972.01.T01:intron | 15.0% |
| !!! | AATTTTATAATCCAAATCTA+AGG | - | Chr3:102744872-102744891 | None:intergenic | 15.0% |
| !!! | AGAAAAATAAAAAAGTGTTT+GGG | + | Chr3:102743787-102743806 | MsG0380017972.01.T01:intron | 15.0% |
| !!! | TCTTATTTTAATTCAGATTA+GGG | + | Chr3:102744234-102744253 | MsG0380017972.01.T01:intron | 15.0% |
| !!! | TTCTTATTTTAATTCAGATT+AGG | + | Chr3:102744233-102744252 | MsG0380017972.01.T01:intron | 15.0% |
| !!! | TTCTTCATTAACAATAATTT+TGG | + | Chr3:102742938-102742957 | MsG0380017972.01.T01:intron | 15.0% |
| !! | AATCAAGAATATCAAGAAAT+TGG | + | Chr3:102746168-102746187 | MsG0380017972.01.T01:intron | 20.0% |
| !! | ATAAAACAAAAGTGATTGAA+AGG | + | Chr3:102743755-102743774 | MsG0380017972.01.T01:intron | 20.0% |
| !! | TGCAGAATAAATAATACAAA+AGG | - | Chr3:102746214-102746233 | None:intergenic | 20.0% |
| !!! | AAAAATAAAAAAGTGTTTGG+GGG | + | Chr3:102743789-102743808 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | AATTGATTTTTCCTTAGATT+TGG | + | Chr3:102744858-102744877 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | ACTTTAATTTTTTTTTAGGC+AGG | + | Chr3:102746438-102746457 | MsG0380017972.01.T01:exon | 20.0% |
| !!! | AGTTTTTTTCTTTTCTCAAA+GGG | - | Chr3:102743415-102743434 | None:intergenic | 20.0% |
| !!! | CAAACACTTTTTTATTTTTC+TGG | - | Chr3:102743788-102743807 | None:intergenic | 20.0% |
| !!! | CAGAAAAATAAAAAAGTGTT+TGG | + | Chr3:102743786-102743805 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | GAAAAATAAAAAAGTGTTTG+GGG | + | Chr3:102743788-102743807 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | TTATCTAAATTGACTTATCT+AGG | - | Chr3:102744522-102744541 | None:intergenic | 20.0% |
| !!! | TTTTGTATTATTTATTCTGC+AGG | + | Chr3:102746213-102746232 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | TTTTTACCCTCTTTTTTTAT+TGG | + | Chr3:102746098-102746117 | MsG0380017972.01.T01:intron | 20.0% |
| !!! | TTTTTTATTCAGACATTACT+TGG | - | Chr3:102745981-102746000 | None:intergenic | 20.0% |
| ! | AAAAATGTTAGTCAAAAGCA+TGG | + | Chr3:102745511-102745530 | MsG0380017972.01.T01:CDS | 25.0% |
| ! | AAAGACAACAATGTAATAAC+GGG | - | Chr3:102745163-102745182 | None:intergenic | 25.0% |
| ! | ACAAAACATTAGACATAACA+TGG | + | Chr3:102745793-102745812 | MsG0380017972.01.T01:intron | 25.0% |
| ! | GAAAGACAACAATGTAATAA+CGG | - | Chr3:102745164-102745183 | None:intergenic | 25.0% |
| ! | TAAATAATACAAAAGGTGAG+TGG | - | Chr3:102746207-102746226 | None:intergenic | 25.0% |
| ! | TACGTCATTAAATTCTCAAA+TGG | + | Chr3:102743455-102743474 | MsG0380017972.01.T01:intron | 25.0% |
| ! | TCCAGGAAAAAAAAGATATA+CGG | - | Chr3:102743220-102743239 | None:intergenic | 25.0% |
| ! | TTAGAGCTTGAACAAAATTA+TGG | + | Chr3:102744631-102744650 | MsG0380017972.01.T01:intron | 25.0% |
| !! | GGTTTTTATGGTATTTGATA+TGG | + | Chr3:102744262-102744281 | MsG0380017972.01.T01:intron | 25.0% |
| !! | TAAAAGGCAAAAGTGATTTT+TGG | + | Chr3:102744785-102744804 | MsG0380017972.01.T01:intron | 25.0% |
| !! | TTAATTCAGATTAGGGTTTT+GGG | + | Chr3:102744241-102744260 | MsG0380017972.01.T01:intron | 25.0% |
| !! | TTTAATTCAGATTAGGGTTT+TGG | + | Chr3:102744240-102744259 | MsG0380017972.01.T01:intron | 25.0% |
| !!! | AAGAAGTTGATGATGAAATT+TGG | - | Chr3:102744147-102744166 | None:intergenic | 25.0% |
| !!! | ATCTATTGATGTTAGTTTTG+AGG | + | Chr3:102743189-102743208 | MsG0380017972.01.T01:intron | 25.0% |
| !!! | CAGTTTTTTTCTTTTCTCAA+AGG | - | Chr3:102743416-102743435 | None:intergenic | 25.0% |
| !!! | TCAAATTCTTTAGCATTGAT+AGG | - | Chr3:102746268-102746287 | None:intergenic | 25.0% |
| !!! | TCTATTGATGTTAGTTTTGA+GGG | + | Chr3:102743190-102743209 | MsG0380017972.01.T01:intron | 25.0% |
| !!! | TTCTTTTTTCCTGGAAAATT+TGG | - | Chr3:102744379-102744398 | None:intergenic | 25.0% |
| !!! | TTGATGATGAAATTTGGAAA+TGG | - | Chr3:102744141-102744160 | None:intergenic | 25.0% |
| AACTCTTTCTTTGCTGAATT+TGG | + | Chr3:102743019-102743038 | MsG0380017972.01.T01:intron | 30.0% | |
| ACTGTCTATTTGTATAGCTA+AGG | + | Chr3:102746531-102746550 | MsG0380017972.01.T01:three_prime_UTR | 30.0% | |
| ATGATCATTTAATCTGCCAT+GGG | - | Chr3:102746305-102746324 | None:intergenic | 30.0% | |
| ATGTAAGTCTTAGCAGAATA+AGG | + | Chr3:102745596-102745615 | MsG0380017972.01.T01:intron | 30.0% | |
| ATTATTTATTCTGCAGGAAG+AGG | + | Chr3:102746219-102746238 | MsG0380017972.01.T01:intron | 30.0% | |
| ATTTAGATTAACCGTTAGTG+TGG | + | Chr3:102744548-102744567 | MsG0380017972.01.T01:intron | 30.0% | |
| CTATCTATCGATCTTCAATT+AGG | + | Chr3:102743925-102743944 | MsG0380017972.01.T01:intron | 30.0% | |
| CTTCTGCCAATAAAAAAAGA+GGG | - | Chr3:102746107-102746126 | None:intergenic | 30.0% | |
| TATCCATACACTCTTCATTA+GGG | - | Chr3:102746014-102746033 | None:intergenic | 30.0% | |
| TCAACATAACTCAATCGTTA+AGG | - | Chr3:102743682-102743701 | None:intergenic | 30.0% | |
| TGATCACCAATAATATTTCC+TGG | - | Chr3:102743055-102743074 | None:intergenic | 30.0% | |
| TGTAGACTAATCGAAACATT+GGG | + | Chr3:102744289-102744308 | MsG0380017972.01.T01:intron | 30.0% | |
| TTGGAATTCCATTTGTGATA+AGG | - | Chr3:102744088-102744107 | None:intergenic | 30.0% | |
| TTGTAGACTAATCGAAACAT+TGG | + | Chr3:102744288-102744307 | MsG0380017972.01.T01:intron | 30.0% | |
| TTTAGGCAGGCTATAAATTT+CGG | + | Chr3:102746451-102746470 | MsG0380017972.01.T01:three_prime_UTR | 30.0% | |
| ! | AAATTGACTTATCTAGGCAA+TGG | - | Chr3:102744516-102744535 | None:intergenic | 30.0% |
| ! | AATTGACTTATCTAGGCAAT+GGG | - | Chr3:102744515-102744534 | None:intergenic | 30.0% |
| ! | GCTAAGACTTACATTTTGTA+GGG | - | Chr3:102745590-102745609 | None:intergenic | 30.0% |
| ! | TGCTAAGACTTACATTTTGT+AGG | - | Chr3:102745591-102745610 | None:intergenic | 30.0% |
| ! | TGGACTTATCTTGACATTTT+TGG | + | Chr3:102745871-102745890 | MsG0380017972.01.T01:intron | 30.0% |
| ! | TGTTGTTTGAATTGTTGAGT+TGG | - | Chr3:102744107-102744126 | None:intergenic | 30.0% |
| !! | AAGAGTGTATGGATACATTT+TGG | + | Chr3:102746019-102746038 | MsG0380017972.01.T01:intron | 30.0% |
| !!! | AATTTTGGTTGCTTCTTTGA+GGG | + | Chr3:102744347-102744366 | MsG0380017972.01.T01:CDS | 30.0% |
| !!! | ATTAGGGTTTTGGGTTTTTA+TGG | + | Chr3:102744250-102744269 | MsG0380017972.01.T01:intron | 30.0% |
| !!! | ATTTTGATTGCTGTTTAGTC+TGG | - | Chr3:102744673-102744692 | None:intergenic | 30.0% |
| !!! | GTTTGGCTTCACTTTTTAAA+AGG | + | Chr3:102744769-102744788 | MsG0380017972.01.T01:intron | 30.0% |
| !!! | TAATTTTGGTTGCTTCTTTG+AGG | + | Chr3:102744346-102744365 | MsG0380017972.01.T01:CDS | 30.0% |
| AAATCAAGTGTAGAGATGTG+TGG | + | Chr3:102745271-102745290 | MsG0380017972.01.T01:CDS | 35.0% | |
| ACCAATAATATTTCCTGGTC+AGG | - | Chr3:102743050-102743069 | None:intergenic | 35.0% | |
| ACCTGACCAGGAAATATTAT+TGG | + | Chr3:102743046-102743065 | MsG0380017972.01.T01:intron | 35.0% | |
| ATCCATACACTCTTCATTAG+GGG | - | Chr3:102746013-102746032 | None:intergenic | 35.0% | |
| ATCCTAGTTGCTAAGGATTT+GGG | + | Chr3:102745679-102745698 | MsG0380017972.01.T01:intron | 35.0% | |
| ATTTGTGATAAGGAAGCGAT+GGG | - | Chr3:102744078-102744097 | None:intergenic | 35.0% | |
| CATGATCATTTAATCTGCCA+TGG | - | Chr3:102746306-102746325 | None:intergenic | 35.0% | |
| CCTTCTGCCAATAAAAAAAG+AGG | - | Chr3:102746108-102746127 | None:intergenic | 35.0% | |
| CTATGTTTGATGCAGTTTAG+AGG | + | Chr3:102745632-102745651 | MsG0380017972.01.T01:intron | 35.0% | |
| CTCTAAACTGCATCAAACAT+AGG | - | Chr3:102745634-102745653 | None:intergenic | 35.0% | |
| GAAGAGCTCTTTAAACAATC+AGG | + | Chr3:102746330-102746349 | MsG0380017972.01.T01:CDS | 35.0% | |
| GATGCACTTCCAAAGTTATT+CGG | - | Chr3:102746391-102746410 | None:intergenic | 35.0% | |
| GCAATAGCAATAGCAAATCA+TGG | + | Chr3:102743849-102743868 | MsG0380017972.01.T01:intron | 35.0% | |
| GGAAACTCCTAATGAAATCT+GGG | - | Chr3:102746603-102746622 | None:intergenic | 35.0% | |
| GTATCCATACACTCTTCATT+AGG | - | Chr3:102746015-102746034 | None:intergenic | 35.0% | |
| TAGCAACTAGGATAAAGACA+TGG | - | Chr3:102745672-102745691 | None:intergenic | 35.0% | |
| TATCCTAGTTGCTAAGGATT+TGG | + | Chr3:102745678-102745697 | MsG0380017972.01.T01:intron | 35.0% | |
| TCCAAAAAATGTCGTTCATG+AGG | + | Chr3:102743251-102743270 | MsG0380017972.01.T01:intron | 35.0% | |
| TGTCTTTATCCTAGTTGCTA+AGG | + | Chr3:102745672-102745691 | MsG0380017972.01.T01:intron | 35.0% | |
| TGTTTAGTCTGGCAAAATTG+TGG | - | Chr3:102744662-102744681 | None:intergenic | 35.0% | |
| !! | AATAAAAAAGTGTTTGGGGG+AGG | + | Chr3:102743792-102743811 | MsG0380017972.01.T01:intron | 35.0% |
| !! | ATAAAAAAGTGTTTGGGGGA+GGG | + | Chr3:102743793-102743812 | MsG0380017972.01.T01:intron | 35.0% |
| !! | CTGTGTTGCTGTTGTAATTT+TGG | + | Chr3:102744332-102744351 | MsG0380017972.01.T01:CDS | 35.0% |
| !! | TGTGCATGTTTTTCAGATCA+AGG | + | Chr3:102745194-102745213 | MsG0380017972.01.T01:intron | 35.0% |
| !! | TTTGTTCAAGCTCTAAAGTG+TGG | - | Chr3:102744627-102744646 | None:intergenic | 35.0% |
| !!! | ATTGATGTTAGTTTTGAGGG+AGG | + | Chr3:102743193-102743212 | MsG0380017972.01.T01:intron | 35.0% |
| !!! | CCTCTTTTTTTATTGGCAGA+AGG | + | Chr3:102746105-102746124 | MsG0380017972.01.T01:intron | 35.0% |
| !!! | GCCGTATATCTTTTTTTTCC+TGG | + | Chr3:102743216-102743235 | MsG0380017972.01.T01:intron | 35.0% |
| !!! | TCCTCATGAACGACATTTTT+TGG | - | Chr3:102743255-102743274 | None:intergenic | 35.0% |
| !!! | TTGATGTTAGTTTTGAGGGA+GGG | + | Chr3:102743194-102743213 | MsG0380017972.01.T01:intron | 35.0% |
| AAGTGTAGAGATGTGTGGAA+AGG | + | Chr3:102745276-102745295 | MsG0380017972.01.T01:CDS | 40.0% | |
| ACGGGAAGCTAAATCTCAAT+AGG | - | Chr3:102745145-102745164 | None:intergenic | 40.0% | |
| AGATCCATTCGATAATCCCT+TGG | + | Chr3:102745231-102745250 | MsG0380017972.01.T01:CDS | 40.0% | |
| AGATGTGTGGAAAGGTTTAC+CGG | + | Chr3:102745284-102745303 | MsG0380017972.01.T01:CDS | 40.0% | |
| AGCAAATCATGGCGTCAATT+TGG | + | Chr3:102743860-102743879 | MsG0380017972.01.T01:intron | 40.0% | |
| AGGAATCCACCTGATTGTAT+CGG | - | Chr3:102745437-102745456 | None:intergenic | 40.0% | |
| AGTAGAGCCGTCAATATCAT+GGG | - | Chr3:102742887-102742906 | None:intergenic | 40.0% | |
| ATGAAAGCCTACCAGAATTG+CGG | - | Chr3:102744191-102744210 | None:intergenic | 40.0% | |
| ATGTTGATCCCGATACAATC+AGG | + | Chr3:102745425-102745444 | MsG0380017972.01.T01:CDS | 40.0% | |
| ATTCGATAATCCCTTGGTCA+AGG | + | Chr3:102745237-102745256 | MsG0380017972.01.T01:CDS | 40.0% | |
| ATTCTGTTCTGCCACACTAA+CGG | - | Chr3:102744562-102744581 | None:intergenic | 40.0% | |
| ATTGTATCGGGATCAACATC+TGG | - | Chr3:102745424-102745443 | None:intergenic | 40.0% | |
| CAATTGAGATCGGATAGAAG+AGG | + | Chr3:102744435-102744454 | MsG0380017972.01.T01:CDS | 40.0% | |
| CATCGCTTCCTTATCACAAA+TGG | + | Chr3:102744077-102744096 | MsG0380017972.01.T01:intron | 40.0% | |
| CATTTGTGATAAGGAAGCGA+TGG | - | Chr3:102744079-102744098 | None:intergenic | 40.0% | |
| CCTTCCTTAAGGAAAACTGT+GGG | - | Chr3:102745388-102745407 | None:intergenic | 40.0% | |
| GAAGCACATACTTCTACATG+AGG | - | Chr3:102746073-102746092 | None:intergenic | 40.0% | |
| GCTGTTACCCAGATTTCATT+AGG | + | Chr3:102746593-102746612 | MsG0380017972.01.T01:three_prime_UTR | 40.0% | |
| GGGAAACTCCTAATGAAATC+TGG | - | Chr3:102746604-102746623 | None:intergenic | 40.0% | |
| GTACTATTATCGGTGAGCAT+TGG | + | Chr3:102746507-102746526 | MsG0380017972.01.T01:three_prime_UTR | 40.0% | |
| TAACAATGCCACGTGTACTT+TGG | - | Chr3:102743349-102743368 | None:intergenic | 40.0% | |
| TCCTAGTTGCTAAGGATTTG+GGG | + | Chr3:102745680-102745699 | MsG0380017972.01.T01:intron | 40.0% | |
| TCCTTCCTTAAGGAAAACTG+TGG | - | Chr3:102745389-102745408 | None:intergenic | 40.0% | |
| TCTCCTCAAAATTAGACAGC+AGG | + | Chr3:102746365-102746384 | MsG0380017972.01.T01:CDS | 40.0% | |
| TTGACCAAGGGATTATCGAA+TGG | - | Chr3:102745238-102745257 | None:intergenic | 40.0% | |
| ! | ACTTCTTCTTGTGCTACTAC+TGG | - | Chr3:102744036-102744055 | None:intergenic | 40.0% |
| ! | CTTTTGCTAACCTTGACCAA+GGG | - | Chr3:102745250-102745269 | None:intergenic | 40.0% |
| ! | TACATGAGGTGTAAGAGTGT+TGG | - | Chr3:102746059-102746078 | None:intergenic | 40.0% |
| ! | TTGGGAGCAATTTACCGATT+TGG | + | Chr3:102744307-102744326 | MsG0380017972.01.T01:CDS | 40.0% |
| ! | TTTGGAAGTGCATCATCATC+TGG | + | Chr3:102746397-102746416 | MsG0380017972.01.T01:CDS | 40.0% |
| !! | CTGTCTAATTTTGAGGAGAG+GGG | - | Chr3:102746364-102746383 | None:intergenic | 40.0% |
| !! | GCTGTCTAATTTTGAGGAGA+GGG | - | Chr3:102746365-102746384 | None:intergenic | 40.0% |
| !! | TGCTGTCTAATTTTGAGGAG+AGG | - | Chr3:102746366-102746385 | None:intergenic | 40.0% |
| !! | TGGGAGCAATTTACCGATTT+GGG | + | Chr3:102744308-102744327 | MsG0380017972.01.T01:CDS | 40.0% |
| ACAGCAACACAGACCCAAAT+CGG | - | Chr3:102744324-102744343 | None:intergenic | 45.0% | |
| ACCCCAAATCCTTAGCAACT+AGG | - | Chr3:102745684-102745703 | None:intergenic | 45.0% | |
| ACTTACTCAAGAGGAACAGG+CGG | + | Chr3:102745321-102745340 | MsG0380017972.01.T01:CDS | 45.0% | |
| ATCTGTAGAGGTGGTTGCAA+AGG | - | Chr3:102745470-102745489 | None:intergenic | 45.0% | |
| CACACTTACTCAAGAGGAAC+AGG | + | Chr3:102745318-102745337 | MsG0380017972.01.T01:CDS | 45.0% | |
| CAGTAGAGCCGTCAATATCA+TGG | - | Chr3:102742888-102742907 | None:intergenic | 45.0% | |
| CATGATATTGACGGCTCTAC+TGG | + | Chr3:102742886-102742905 | MsG0380017972.01.T01:CDS | 45.0% | |
| CCTCATGCTCAGCTTGAATA+CGG | - | Chr3:102745546-102745565 | None:intergenic | 45.0% | |
| CCTCTATTCCAAAGTACACG+TGG | + | Chr3:102743338-102743357 | MsG0380017972.01.T01:intron | 45.0% | |
| CCTCTTGAGTAAGTGTGACA+GGG | - | Chr3:102745315-102745334 | None:intergenic | 45.0% | |
| CGTTCAACTCACTCTTACGT+AGG | + | Chr3:102744947-102744966 | MsG0380017972.01.T01:intron | 45.0% | |
| CTCTTGAGTAAGTGTGACAG+GGG | - | Chr3:102745314-102745333 | None:intergenic | 45.0% | |
| GAACTGAGTCTCCTTCCTTA+AGG | - | Chr3:102745399-102745418 | None:intergenic | 45.0% | |
| GCAACCACCTCTACAGATAT+CGG | + | Chr3:102745472-102745491 | MsG0380017972.01.T01:CDS | 45.0% | |
| GCGTCTAACAAGATCAGCTA+CGG | - | Chr3:102744412-102744431 | None:intergenic | 45.0% | |
| GCTTGACATTGAGACACTTG+TGG | + | Chr3:102745851-102745870 | MsG0380017972.01.T01:intron | 45.0% | |
| GGAATCCACCTGATTGTATC+GGG | - | Chr3:102745436-102745455 | None:intergenic | 45.0% | |
| GTAGAGCCGTCAATATCATG+GGG | - | Chr3:102742886-102742905 | None:intergenic | 45.0% | |
| GTAGCTGATCTTGTTAGACG+CGG | + | Chr3:102744411-102744430 | MsG0380017972.01.T01:CDS | 45.0% | |
| TAGACGCGGTCAATTGAGAT+CGG | + | Chr3:102744425-102744444 | MsG0380017972.01.T01:CDS | 45.0% | |
| TCAAGGCCCCATGATATTGA+CGG | + | Chr3:102742877-102742896 | MsG0380017972.01.T01:CDS | 45.0% | |
| TCCAGGAAAAAAGAACGTCC+TGG | + | Chr3:102744384-102744403 | MsG0380017972.01.T01:CDS | 45.0% | |
| TCCTCTTGAGTAAGTGTGAC+AGG | - | Chr3:102745316-102745335 | None:intergenic | 45.0% | |
| TCTGTAGAGGTGGTTGCAAA+GGG | - | Chr3:102745469-102745488 | None:intergenic | 45.0% | |
| TGCTCAGCTTGAATACGGAA+AGG | - | Chr3:102745541-102745560 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGCGTATGTT+TGG | + | Chr3:102744589-102744608 | MsG0380017972.01.T01:intron | 45.0% | |
| TTAGTCTCGTAGCACGAAGT+GGG | - | Chr3:102746624-102746643 | None:intergenic | 45.0% | |
| TTGATCCCGATACAATCAGG+TGG | + | Chr3:102745428-102745447 | MsG0380017972.01.T01:CDS | 45.0% | |
| TTTGGATCTGTCACTGTTCC+AGG | - | Chr3:102743237-102743256 | None:intergenic | 45.0% | |
| ! | ATCACTTGTGTTGATGCGTG+TGG | - | Chr3:102745819-102745838 | None:intergenic | 45.0% |
| ! | ATCATGGGGCCTTGAAGTTT+TGG | - | Chr3:102742872-102742891 | None:intergenic | 45.0% |
| ! | CCCACAGTTTTCCTTAAGGA+AGG | + | Chr3:102745385-102745404 | MsG0380017972.01.T01:CDS | 45.0% |
| ! | CCTTTTTGCCCCTTTGTCAT+CGG | + | Chr3:102744008-102744027 | MsG0380017972.01.T01:intron | 45.0% |
| ! | GACCCCTAATGAAGAGTGTA+TGG | + | Chr3:102746008-102746027 | MsG0380017972.01.T01:intron | 45.0% |
| ! | GCTTTTGCTAACCTTGACCA+AGG | - | Chr3:102745251-102745270 | None:intergenic | 45.0% |
| ! | GGGCTCTTTCCAAATTTTCC+AGG | + | Chr3:102744367-102744386 | MsG0380017972.01.T01:CDS | 45.0% |
| ! | GTTGCTAAGGATTTGGGGTT+TGG | + | Chr3:102745685-102745704 | MsG0380017972.01.T01:intron | 45.0% |
| !! | ACTACTGGTACCGATGACAA+AGG | - | Chr3:102744021-102744040 | None:intergenic | 45.0% |
| !! | AGTTAGTGCTGTTTGAGTCG+TGG | + | Chr3:102744697-102744716 | MsG0380017972.01.T01:intron | 45.0% |
| !! | CCACGTGTACTTTGGAATAG+AGG | - | Chr3:102743341-102743360 | None:intergenic | 45.0% |
| !! | CTACTGGTACCGATGACAAA+GGG | - | Chr3:102744020-102744039 | None:intergenic | 45.0% |
| !! | GTTAGTGCTGTTTGAGTCGT+GGG | + | Chr3:102744698-102744717 | MsG0380017972.01.T01:intron | 45.0% |
| !! | TACTGGTACCGATGACAAAG+GGG | - | Chr3:102744019-102744038 | None:intergenic | 45.0% |
| !!! | ACCAGGACGTTCTTTTTTCC+TGG | - | Chr3:102744388-102744407 | None:intergenic | 45.0% |
| !!! | AGGATTTGGGGTTTGGCTTT+TGG | + | Chr3:102745692-102745711 | MsG0380017972.01.T01:intron | 45.0% |
| !!! | GGCAATGGAAGGCATTTTCA+AGG | + | Chr3:102742912-102742931 | MsG0380017972.01.T01:CDS | 45.0% |
| !!! | ATTGTTTTTTTTTTTTTTAT+GGG | - | Chr3:102743171-102743190 | None:intergenic | 5.0% |
| !!! | TTAAACTTTAATTTTTTTTT+AGG | + | Chr3:102746434-102746453 | MsG0380017972.01.T01:exon | 5.0% |
| AAACATCCACCAGGGGAATC+GGG | - | Chr3:102744753-102744772 | None:intergenic | 50.0% | |
| AAAGTGGGTCACCAGGGATA+AGG | - | Chr3:102744728-102744747 | None:intergenic | 50.0% | |
| AATCTGCCATGGGAGTCGAA+TGG | - | Chr3:102746295-102746314 | None:intergenic | 50.0% | |
| ACAAGATCAGCTACGGAACC+AGG | - | Chr3:102744405-102744424 | None:intergenic | 50.0% | |
| AGTGAAGCCAAACATCCACC+AGG | - | Chr3:102744762-102744781 | None:intergenic | 50.0% | |
| CAAACATCCACCAGGGGAAT+CGG | - | Chr3:102744754-102744773 | None:intergenic | 50.0% | |
| CAGGGGAATCGGGTAAAAGT+GGG | - | Chr3:102744743-102744762 | None:intergenic | 50.0% | |
| CCCTGTCACACTTACTCAAG+AGG | + | Chr3:102745312-102745331 | MsG0380017972.01.T01:CDS | 50.0% | |
| CCGATGACAAAGGGGCAAAA+AGG | - | Chr3:102744011-102744030 | None:intergenic | 50.0% | |
| CCGTATTCAAGCTGAGCATG+AGG | + | Chr3:102745543-102745562 | MsG0380017972.01.T01:CDS | 50.0% | |
| CCTACCAGAATTGCGGCATT+GGG | - | Chr3:102744184-102744203 | None:intergenic | 50.0% | |
| GAATTTGGCAACACCTGACC+AGG | + | Chr3:102743034-102743053 | MsG0380017972.01.T01:intron | 50.0% | |
| GACAGCAGGCCGAATAACTT+TGG | + | Chr3:102746379-102746398 | MsG0380017972.01.T01:CDS | 50.0% | |
| GGCTTCAAGCTTTCTCTGCA+GGG | - | Chr3:102745569-102745588 | None:intergenic | 50.0% | |
| GTATCGGGATCAACATCTGG+AGG | - | Chr3:102745421-102745440 | None:intergenic | 50.0% | |
| GTGAAGCCAAACATCCACCA+GGG | - | Chr3:102744761-102744780 | None:intergenic | 50.0% | |
| GTTGCAAAGGGATGATTCGC+AGG | - | Chr3:102745457-102745476 | None:intergenic | 50.0% | |
| TAAGTGTGACAGGGGCTAAC+CGG | - | Chr3:102745306-102745325 | None:intergenic | 50.0% | |
| TATTGACGGCTCTACTGGCA+AGG | + | Chr3:102742891-102742910 | MsG0380017972.01.T01:CDS | 50.0% | |
| TCTACTGGCAAGGCAATGGA+AGG | + | Chr3:102742901-102742920 | MsG0380017972.01.T01:CDS | 50.0% | |
| TGAAGCCAAACATCCACCAG+GGG | - | Chr3:102744760-102744779 | None:intergenic | 50.0% | |
| ! | CGGCCTGCTGTCTAATTTTG+AGG | - | Chr3:102746371-102746390 | None:intergenic | 50.0% |
| ! | GCGTCCCACAGTTTTCCTTA+AGG | + | Chr3:102745381-102745400 | MsG0380017972.01.T01:CDS | 50.0% |
| ! | GTTAGTCTCGTAGCACGAAG+TGG | - | Chr3:102746625-102746644 | None:intergenic | 50.0% |
| !!! | GGGGTTTGGCTTTTGGCTTT+TGG | + | Chr3:102745699-102745718 | MsG0380017972.01.T01:intron | 50.0% |
| AACAGGCGGTTCACCAGAGA+AGG | + | Chr3:102745335-102745354 | MsG0380017972.01.T01:CDS | 55.0% | |
| ACGCACGTGATCTCCTTCTC+TGG | - | Chr3:102745351-102745370 | None:intergenic | 55.0% | |
| CACCTCTACAGATATCGGCG+AGG | + | Chr3:102745477-102745496 | MsG0380017972.01.T01:CDS | 55.0% | |
| CCAGGGGAATCGGGTAAAAG+TGG | - | Chr3:102744744-102744763 | None:intergenic | 55.0% | |
| CCATCCCAATGCCGCAATTC+TGG | + | Chr3:102744177-102744196 | MsG0380017972.01.T01:intron | 55.0% | |
| CCCAATGCCGCAATTCTGGT+AGG | + | Chr3:102744181-102744200 | MsG0380017972.01.T01:intron | 55.0% | |
| CGGGTAAAAGTGGGTCACCA+GGG | - | Chr3:102744734-102744753 | None:intergenic | 55.0% | |
| CTCGCCGATATCTGTAGAGG+TGG | - | Chr3:102745479-102745498 | None:intergenic | 55.0% | |
| GAGAGACCATTCGACTCCCA+TGG | + | Chr3:102746286-102746305 | MsG0380017972.01.T01:CDS | 55.0% | |
| GCCTACCAGAATTGCGGCAT+TGG | - | Chr3:102744185-102744204 | None:intergenic | 55.0% | |
| GGAGATCACGTGCGTATCAG+TGG | + | Chr3:102745356-102745375 | MsG0380017972.01.T01:CDS | 55.0% | |
| GGGCTTCAAGCTTTCTCTGC+AGG | - | Chr3:102745570-102745589 | None:intergenic | 55.0% | |
| GGGGGAGGGAGCAATGAAAA+TGG | + | Chr3:102743807-102743826 | MsG0380017972.01.T01:intron | 55.0% | |
| GTCCTCGCCGATATCTGTAG+AGG | - | Chr3:102745482-102745501 | None:intergenic | 55.0% | |
| TCGGGTAAAAGTGGGTCACC+AGG | - | Chr3:102744735-102744754 | None:intergenic | 55.0% | |
| ! | CCAGAATTGCGGCATTGGGA+TGG | - | Chr3:102744180-102744199 | None:intergenic | 55.0% |
| ! | CGATTCCCCTGGTGGATGTT+TGG | + | Chr3:102744752-102744771 | MsG0380017972.01.T01:intron | 55.0% |
| ! | CTTTTACCCGATTCCCCTGG+TGG | + | Chr3:102744744-102744763 | MsG0380017972.01.T01:intron | 55.0% |
| ! | TCGTGGGCTAACCTTATCCC+TGG | + | Chr3:102744714-102744733 | MsG0380017972.01.T01:intron | 55.0% |
| !! | CCACTTTTACCCGATTCCCC+TGG | + | Chr3:102744741-102744760 | MsG0380017972.01.T01:intron | 55.0% |
| CGGCTCTACTGGCAAGGCAA+TGG | + | Chr3:102742897-102742916 | MsG0380017972.01.T01:CDS | 60.0% | |
| GGGCTGGGGCCAAAACTTCA+AGG | + | Chr3:102742860-102742879 | MsG0380017972.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 102742856 | 102746649 | 102742856 | ID=MsG0380017972.01;Name=MsG0380017972.01 |
| Chr3 | mRNA | 102742856 | 102746649 | 102742856 | ID=MsG0380017972.01.T01;Parent=MsG0380017972.01;Name=MsG0380017972.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.66|0.75|0.75|1|0.75|4|205|280 |
| Chr3 | exon | 102742856 | 102742933 | 102742856 | ID=MsG0380017972.01.T01:exon:13435;Parent=MsG0380017972.01.T01 |
| Chr3 | exon | 102744294 | 102744460 | 102744294 | ID=MsG0380017972.01.T01:exon:13436;Parent=MsG0380017972.01.T01 |
| Chr3 | exon | 102745210 | 102745597 | 102745210 | ID=MsG0380017972.01.T01:exon:13437;Parent=MsG0380017972.01.T01 |
| Chr3 | exon | 102746235 | 102746649 | 102746235 | ID=MsG0380017972.01.T01:exon:13438;Parent=MsG0380017972.01.T01 |
| Chr3 | CDS | 102742856 | 102742933 | 102742856 | ID=MsG0380017972.01.T01:cds;Parent=MsG0380017972.01.T01 |
| Chr3 | CDS | 102744294 | 102744460 | 102744294 | ID=MsG0380017972.01.T01:cds;Parent=MsG0380017972.01.T01 |
| Chr3 | CDS | 102745210 | 102745597 | 102745210 | ID=MsG0380017972.01.T01:cds;Parent=MsG0380017972.01.T01 |
| Chr3 | CDS | 102746235 | 102746444 | 102746235 | ID=MsG0380017972.01.T01:cds;Parent=MsG0380017972.01.T01 |
| Chr3 | three_prime_UTR | 102746445 | 102746649 | 102746445 | ID=MsG0380017972.01.T01:three_prime_utr;Parent=MsG0380017972.01.T01 |
| Gene Sequence |
| Protein sequence |
