AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1420520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420520 MtrunA17_Chr7g0267571 92.901 324 17 1 1 324 1 318 0.0 617
Msa1420520 MtrunA17_Chr1g0177101 56.688 314 112 8 12 319 11 306 1.21e-105 311
Msa1420520 MtrunA17_Chr1g0181111 38.246 285 141 7 27 297 12 275 2.21e-46 158
Msa1420520 MtrunA17_Chr3g0087481 32.982 285 140 5 10 294 2 235 5.50e-42 145
Msa1420520 MtrunA17_Chr3g0116631 35.636 275 142 9 41 297 28 285 2.47e-41 145
Msa1420520 MtrunA17_Chr4g0058151 39.560 182 101 2 116 297 123 295 2.29e-40 143
Msa1420520 MtrunA17_Chr4g0058151 46.341 82 44 0 219 300 123 204 4.97e-15 74.3
Msa1420520 MtrunA17_Chr1g0168601 37.576 165 91 1 133 297 80 232 4.46e-36 130
Msa1420520 MtrunA17_Chr1g0168601 35.417 96 59 1 97 192 138 230 3.41e-11 62.4
Msa1420520 MtrunA17_Chr5g0411091 33.333 183 113 4 117 298 98 272 2.13e-25 103
Msa1420520 MtrunA17_Chr1g0179701 32.044 181 118 3 117 297 243 418 9.73e-20 89.7
Msa1420520 MtrunA17_Chr1g0179701 26.957 230 149 5 62 289 8 220 5.55e-19 87.4
Msa1420520 MtrunA17_Chr1g0179701 26.596 188 117 5 115 298 150 320 2.27e-11 64.7
Msa1420520 MtrunA17_Chr2g0328791 26.178 191 126 3 110 297 10 188 1.46e-19 89.0
Msa1420520 MtrunA17_Chr4g0074711 26.733 202 131 4 100 297 59 247 1.80e-18 85.5
Msa1420520 MtrunA17_Chr3g0110211 30.168 179 106 4 118 294 28 189 2.06e-18 85.1
Msa1420520 MtrunA17_Chr7g0265341 30.387 181 119 4 117 294 251 427 8.67e-18 84.3
Msa1420520 MtrunA17_Chr7g0265341 27.513 189 118 3 117 302 72 244 7.19e-16 78.6
Msa1420520 MtrunA17_Chr3g0132451 28.351 194 121 5 105 291 74 256 1.08e-17 82.0
Msa1420520 MtrunA17_Chr3g0119311 36.559 93 59 0 219 311 37 129 1.08e-17 78.2
Msa1420520 MtrunA17_Chr3g0119311 39.024 82 49 1 116 196 37 118 4.57e-12 62.8
Msa1420520 MtrunA17_Chr2g0288251 27.179 195 129 4 106 297 51 235 1.62e-17 82.8
Msa1420520 MtrunA17_Chr7g0219021 43.529 85 48 0 216 300 38 122 5.04e-17 79.3
Msa1420520 MtrunA17_Chr7g0219021 35.294 85 54 1 106 190 32 115 8.23e-13 67.4
Msa1420520 MtrunA17_Chr4g0044541 28.235 170 98 3 117 282 36 185 2.34e-16 79.7
Msa1420520 MtrunA17_Chr4g0044541 31.319 182 116 6 117 294 215 391 4.92e-13 69.7
Msa1420520 MtrunA17_Chr4g0045221 27.461 193 124 4 117 303 118 300 1.38e-15 77.0
Msa1420520 MtrunA17_Chr3g0133651 26.500 200 113 4 113 299 91 269 1.46e-15 77.0
Msa1420520 MtrunA17_Chr3g0134141 26.554 177 106 3 117 289 26 182 1.96e-15 77.0
Msa1420520 MtrunA17_Chr3g0134141 32.124 193 121 7 101 289 190 376 3.71e-11 63.9
Msa1420520 MtrunA17_Chr4g0035051 37.500 80 50 0 215 294 5 84 3.67e-15 70.9
Msa1420520 MtrunA17_Chr1g0153871 26.344 186 122 4 117 299 99 272 1.09e-14 74.3
Msa1420520 MtrunA17_Chr4g0035001 37.500 80 50 0 215 294 3 82 1.70e-14 70.1
Msa1420520 MtrunA17_Chr4g0070231 28.302 212 115 8 116 303 132 330 2.02e-14 73.6
Msa1420520 MtrunA17_Chr4g0070231 25.581 215 134 4 117 323 48 244 4.45e-13 69.3
Msa1420520 MtrunA17_Chr3g0139111 25.822 213 128 5 117 308 147 350 2.62e-14 73.2
Msa1420520 MtrunA17_Chr3g0139111 26.404 178 113 2 117 294 62 221 9.84e-14 71.6
Msa1420520 MtrunA17_Chr2g0278661 42.105 76 44 0 219 294 8 83 3.01e-14 71.2
Msa1420520 MtrunA17_Chr1g0153181 30.457 197 130 5 101 294 198 390 3.60e-14 73.2
Msa1420520 MtrunA17_Chr1g0153181 25.714 175 106 3 117 287 34 188 5.79e-14 72.8
Msa1420520 MtrunA17_Chr4g0035031 39.759 83 50 0 212 294 2 84 4.52e-14 69.7
Msa1420520 MtrunA17_Chr1g0201151 26.923 208 125 5 117 316 32 220 5.47e-14 72.8
Msa1420520 MtrunA17_Chr1g0201151 27.320 194 109 6 117 294 211 388 1.90e-11 65.1
Msa1420520 MtrunA17_Chr3g0121631 41.463 82 47 1 216 297 34 114 6.64e-14 68.2
Msa1420520 MtrunA17_Chr4g0050781 38.961 77 47 0 218 294 7 83 1.01e-13 69.3
Msa1420520 MtrunA17_Chr8g0344491 28.638 213 122 6 117 308 149 352 1.12e-13 71.2
Msa1420520 MtrunA17_Chr8g0344491 26.291 213 131 5 117 321 64 258 6.39e-12 65.9
Msa1420520 MtrunA17_Chr2g0290191 27.411 197 128 6 113 302 2 190 1.52e-13 71.2
Msa1420520 MtrunA17_Chr4g0061451 40.741 81 47 1 116 195 43 123 1.56e-13 69.7
Msa1420520 MtrunA17_Chr4g0061451 37.975 79 49 0 219 297 43 121 2.24e-13 69.3
Msa1420520 MtrunA17_Chr0c09g0493511 30.435 184 116 6 117 294 120 297 3.46e-13 70.1
Msa1420520 MtrunA17_Chr7g0219031 46.154 65 35 0 216 280 38 102 4.18e-13 65.1
Msa1420520 MtrunA17_Chr4g0068631 27.381 168 107 5 116 282 89 242 7.25e-13 69.3
Msa1420520 MtrunA17_Chr6g0465691 29.891 184 117 6 117 294 120 297 1.07e-12 68.6
Msa1420520 MtrunA17_Chr6g0465691 28.571 168 97 6 117 281 33 180 3.28e-11 63.9
Msa1420520 MtrunA17_Chr1g0201001 38.554 83 51 0 117 199 31 113 1.07e-12 68.6
Msa1420520 MtrunA17_Chr6g0466501 29.891 184 117 6 117 294 202 379 1.51e-12 68.2
Msa1420520 MtrunA17_Chr6g0449481 24.868 189 127 4 115 303 45 218 1.63e-12 67.8
Msa1420520 MtrunA17_Chr6g0465751 24.747 198 128 5 111 303 16 197 2.54e-12 67.8
Msa1420520 MtrunA17_Chr6g0465751 27.513 189 115 5 117 294 202 379 9.29e-12 65.9
Msa1420520 MtrunA17_Chr8g0383661 28.108 185 121 5 113 292 200 377 3.94e-12 67.0
Msa1420520 MtrunA17_Chr3g0086861 37.500 88 54 1 211 297 36 123 6.31e-12 66.2
Msa1420520 MtrunA17_Chr3g0086861 38.667 75 46 0 116 190 45 119 4.07e-11 63.5
Msa1420520 MtrunA17_Chr3g0101061 27.885 208 126 8 113 308 38 233 8.81e-12 65.9
Msa1420520 MtrunA17_Chr6g0466451 26.943 193 111 5 117 294 107 284 9.08e-12 65.9
Msa1420520 MtrunA17_Chr6g0465631 26.943 193 111 5 117 294 107 284 9.16e-12 65.9
Msa1420520 MtrunA17_Chr1g0210241 36.585 82 52 0 218 299 7 88 1.09e-11 64.3
Msa1420520 MtrunA17_Chr5g0429941 40.000 90 54 0 117 206 18 107 1.42e-11 63.9
Msa1420520 MtrunA17_Chr4g0050441 39.362 94 57 0 111 204 12 105 1.65e-11 63.9
Msa1420520 MtrunA17_Chr1g0190211 31.132 106 72 1 218 323 132 236 2.78e-11 62.8
Msa1420520 MtrunA17_Chr7g0266751 34.177 79 52 0 114 192 31 109 8.06e-11 59.3
Msa1420520 MtrunA17_Chr6g0481071 41.111 90 50 1 116 205 96 182 9.70e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420520 AT3G52380.1 64.651 215 72 2 113 323 114 328 1.03e-99 297
Msa1420520 AT2G37220.1 39.583 192 106 2 116 297 92 283 2.33e-43 151
Msa1420520 AT1G60000.1 38.462 182 101 1 116 297 86 256 6.99e-42 146
Msa1420520 AT1G60000.1 38.384 99 59 1 97 195 161 257 9.02e-14 70.5
Msa1420520 AT5G50250.1 34.074 270 147 8 39 297 37 286 2.29e-38 138
Msa1420520 AT2G35410.1 34.586 266 147 6 41 294 21 271 1.00e-37 137
Msa1420520 AT3G52150.2 37.755 196 116 2 103 294 60 253 2.56e-37 134
Msa1420520 AT3G52150.1 37.755 196 116 2 103 294 60 253 2.56e-37 134
Msa1420520 AT4G24770.1 38.462 182 103 2 116 297 151 323 3.96e-37 135
Msa1420520 AT4G24770.1 49.367 79 40 0 114 192 243 321 4.52e-18 84.0
Msa1420520 AT4G24770.2 38.462 182 103 2 116 297 151 323 3.96e-37 135
Msa1420520 AT4G24770.2 49.367 79 40 0 114 192 243 321 4.52e-18 84.0
Msa1420520 AT1G01080.1 37.931 174 102 3 117 287 110 280 6.91e-28 110
Msa1420520 AT1G01080.2 38.286 175 101 4 117 287 110 281 4.07e-27 108
Msa1420520 AT1G01080.3 38.095 168 98 3 117 281 110 274 3.81e-26 105
Msa1420520 AT3G16380.1 32.995 197 122 5 102 294 189 379 3.68e-22 97.4
Msa1420520 AT3G16380.1 29.714 175 109 4 115 289 21 181 6.61e-14 72.8
Msa1420520 AT1G11650.1 28.505 214 136 5 86 297 37 235 3.34e-20 89.7
Msa1420520 AT1G11650.2 28.505 214 136 5 86 297 37 235 2.27e-19 88.6
Msa1420520 AT3G53460.1 43.750 80 45 0 218 297 257 336 5.47e-19 86.7
Msa1420520 AT3G53460.1 47.253 91 47 1 116 205 100 190 2.63e-15 76.3
Msa1420520 AT3G53460.1 40.964 83 47 1 116 196 258 340 2.58e-13 70.1
Msa1420520 AT3G53460.1 42.718 103 48 3 207 308 92 184 2.03e-11 64.7
Msa1420520 AT3G53460.3 43.750 80 45 0 218 297 257 336 5.47e-19 86.7
Msa1420520 AT3G53460.3 47.253 91 47 1 116 205 100 190 2.63e-15 76.3
Msa1420520 AT3G53460.3 40.964 83 47 1 116 196 258 340 2.58e-13 70.1
Msa1420520 AT3G53460.3 42.718 103 48 3 207 308 92 184 2.03e-11 64.7
Msa1420520 AT3G53460.2 43.750 80 45 0 218 297 257 336 5.47e-19 86.7
Msa1420520 AT3G53460.2 47.253 91 47 1 116 205 100 190 2.63e-15 76.3
Msa1420520 AT3G53460.2 40.964 83 47 1 116 196 258 340 2.58e-13 70.1
Msa1420520 AT3G53460.2 42.718 103 48 3 207 308 92 184 2.03e-11 64.7
Msa1420520 AT3G53460.4 43.750 80 45 0 218 297 278 357 7.44e-19 86.7
Msa1420520 AT3G53460.4 40.964 83 47 1 116 196 279 361 3.26e-13 70.1
Msa1420520 AT3G53460.4 53.968 63 29 0 116 178 100 162 9.74e-13 68.6
Msa1420520 AT5G19350.1 26.000 200 136 3 99 297 8 196 1.87e-18 85.9
Msa1420520 AT5G19350.2 26.000 200 136 3 99 297 8 196 2.25e-18 85.5
Msa1420520 AT5G06210.1 43.902 82 46 0 114 195 33 114 4.82e-18 80.1
Msa1420520 AT5G54900.1 27.885 208 137 5 106 310 51 248 1.02e-17 83.6
Msa1420520 AT4G09040.1 26.182 275 165 8 18 291 26 263 1.11e-17 82.4
Msa1420520 AT2G36660.1 28.571 182 127 3 117 297 203 382 7.31e-17 81.6
Msa1420520 AT4G09040.2 27.684 177 119 4 116 291 35 203 7.89e-17 79.0
Msa1420520 AT4G13850.3 47.059 85 43 1 219 303 36 118 8.33e-17 76.6
Msa1420520 AT4G13850.2 47.059 85 43 1 219 303 36 118 1.03e-16 76.6
Msa1420520 AT4G13850.1 47.059 85 43 1 219 303 36 118 1.16e-16 76.6
Msa1420520 AT1G49760.1 30.723 166 99 3 117 282 47 196 2.23e-16 80.5
Msa1420520 AT1G49760.1 31.319 182 116 6 117 294 226 402 4.52e-13 70.5
Msa1420520 AT1G49760.1 29.940 167 104 5 115 281 133 286 3.08e-12 67.8
Msa1420520 AT1G49760.2 30.723 166 99 3 117 282 47 196 2.23e-16 80.5
Msa1420520 AT1G49760.2 31.319 182 116 6 117 294 226 402 4.52e-13 70.5
Msa1420520 AT1G49760.2 29.940 167 104 5 115 281 133 286 3.08e-12 67.8
Msa1420520 AT4G13850.4 46.835 79 42 0 219 297 36 114 3.28e-16 74.3
Msa1420520 AT4G13850.4 37.838 74 46 0 116 189 36 109 8.44e-11 59.3
Msa1420520 AT2G18510.1 27.322 183 114 4 117 297 27 192 5.91e-16 78.2
Msa1420520 AT3G19130.1 27.368 190 122 4 112 297 105 282 6.32e-16 78.6
Msa1420520 AT1G54080.1 30.899 178 105 4 117 294 65 224 8.41e-16 78.2
Msa1420520 AT1G54080.1 29.730 185 92 7 117 276 150 321 2.23e-11 64.7
Msa1420520 AT4G34110.1 30.120 166 100 3 117 282 38 187 1.05e-15 78.2
Msa1420520 AT4G34110.1 27.485 171 105 4 114 281 123 277 7.92e-13 69.7
Msa1420520 AT4G34110.1 28.022 182 122 5 117 294 217 393 2.56e-11 65.1
Msa1420520 AT3G08000.1 36.458 96 61 0 219 314 42 137 1.64e-15 72.8
Msa1420520 AT4G39260.3 39.024 82 50 0 218 299 6 87 1.88e-15 71.2
Msa1420520 AT3G23830.2 41.463 82 48 0 219 300 36 117 3.46e-15 72.0
Msa1420520 AT3G23830.2 36.842 76 48 0 116 191 36 111 5.24e-11 60.1
Msa1420520 AT3G23830.1 41.463 82 48 0 219 300 36 117 3.46e-15 72.0
Msa1420520 AT3G23830.1 36.842 76 48 0 116 191 36 111 5.24e-11 60.1
Msa1420520 AT4G39260.2 38.462 78 48 0 217 294 5 82 3.93e-15 71.2
Msa1420520 AT5G40490.1 23.318 223 152 5 75 297 6 209 6.03e-15 75.5
Msa1420520 AT2G23350.1 27.879 165 103 2 117 281 48 196 8.12e-15 75.5
Msa1420520 AT2G23350.1 31.522 184 113 6 117 294 227 403 5.19e-13 70.1
Msa1420520 AT2G23350.1 31.138 167 102 5 115 281 134 287 7.48e-13 69.7
Msa1420520 AT4G39260.1 38.462 78 48 0 217 294 5 82 1.05e-14 71.2
Msa1420520 AT1G47490.2 27.419 186 119 5 117 297 103 277 1.21e-14 73.9
Msa1420520 AT1G22760.1 28.177 181 109 5 109 284 130 294 1.73e-14 74.7
Msa1420520 AT1G22760.1 28.261 184 119 5 117 294 231 407 2.33e-11 65.1
Msa1420520 AT1G49600.3 29.255 188 121 4 112 297 116 293 2.00e-14 73.9
Msa1420520 AT1G49600.2 29.255 188 121 4 112 297 116 293 2.00e-14 73.9
Msa1420520 AT2G21660.2 37.500 80 50 0 215 294 5 84 2.06e-14 70.5
Msa1420520 AT2G21660.2 41.892 74 43 0 116 189 9 82 2.12e-11 62.0
Msa1420520 AT3G14100.1 28.788 198 123 4 117 314 61 240 2.09e-14 73.9
Msa1420520 AT1G49600.1 30.000 190 117 5 112 297 116 293 2.28e-14 73.9
Msa1420520 AT2G21660.1 37.500 80 50 0 215 294 5 84 2.93e-14 70.5
Msa1420520 AT2G21660.1 41.892 74 43 0 116 189 9 82 2.91e-11 62.0
Msa1420520 AT4G26650.1 27.363 201 118 6 104 285 4 195 3.58e-14 73.2
Msa1420520 AT1G54080.2 30.220 182 105 5 117 294 65 228 5.03e-14 72.8
Msa1420520 AT1G47490.1 27.273 187 118 5 117 297 103 277 8.10e-14 72.0
Msa1420520 AT5G61030.2 43.421 76 43 0 116 191 41 116 8.80e-14 71.2
Msa1420520 AT5G61030.2 36.585 82 52 0 216 297 38 119 6.16e-13 68.9
Msa1420520 AT5G61030.1 43.421 76 43 0 116 191 41 116 8.80e-14 71.2
Msa1420520 AT5G61030.1 36.585 82 52 0 216 297 38 119 6.16e-13 68.9
Msa1420520 AT4G13860.1 45.455 77 42 0 114 190 2 78 1.42e-13 65.9
Msa1420520 AT4G26650.2 27.000 200 118 6 105 285 2 192 2.02e-13 71.2
Msa1420520 AT1G17640.2 29.630 162 96 3 115 273 66 212 2.66e-13 70.5
Msa1420520 AT1G17640.1 29.630 162 96 3 115 273 66 212 2.66e-13 70.5
Msa1420520 AT1G17640.3 29.630 162 96 3 115 273 66 212 2.66e-13 70.5
Msa1420520 AT1G34140.1 29.843 191 114 5 117 297 121 301 3.50e-13 70.1
Msa1420520 AT1G34140.1 29.444 180 111 5 115 294 31 194 9.36e-12 65.9
Msa1420520 AT1G47500.2 26.738 187 119 5 117 297 105 279 3.90e-13 69.3
Msa1420520 AT1G17370.1 28.090 178 110 3 117 294 56 215 4.53e-13 70.1
Msa1420520 AT1G17370.2 28.090 178 110 3 117 294 56 215 5.02e-13 69.7
Msa1420520 AT3G26420.1 38.750 80 49 0 215 294 4 83 5.95e-13 68.2
Msa1420520 AT1G71770.1 29.787 188 111 5 117 294 241 417 9.69e-13 69.3
Msa1420520 AT1G71770.1 27.108 166 104 4 117 282 61 209 7.86e-11 63.5
Msa1420520 AT1G71770.2 29.787 188 111 5 117 294 241 417 9.69e-13 69.3
Msa1420520 AT1G71770.2 27.108 166 104 4 117 282 61 209 7.86e-11 63.5
Msa1420520 AT1G47500.1 26.738 187 119 5 117 297 105 279 1.02e-12 68.9
Msa1420520 AT5G19960.1 34.783 115 72 2 110 224 2 113 1.17e-12 68.2
Msa1420520 AT4G27000.1 23.153 203 138 4 117 316 82 269 2.07e-12 67.8
Msa1420520 AT1G74230.1 44.000 75 41 1 116 190 35 108 3.01e-12 66.6
Msa1420520 AT1G74230.1 37.975 79 48 1 216 294 32 109 6.35e-11 62.8
Msa1420520 AT5G09880.1 25.366 205 140 4 95 298 154 346 3.86e-12 67.4
Msa1420520 AT1G71800.1 38.554 83 51 0 117 199 11 93 4.68e-12 67.0
Msa1420520 AT3G13224.1 25.294 170 114 4 115 284 19 175 8.77e-12 64.3
Msa1420520 AT5G55550.2 25.269 186 120 5 113 285 4 183 1.06e-11 65.9
Msa1420520 AT5G55550.3 25.269 186 120 5 113 285 4 183 1.06e-11 65.9
Msa1420520 AT5G55550.6 25.269 186 120 5 113 285 4 183 1.06e-11 65.9
Msa1420520 AT5G55550.11 25.269 186 120 5 113 285 4 183 1.06e-11 65.9
Msa1420520 AT3G07810.2 28.743 167 112 4 113 276 4 166 1.31e-11 65.9
Msa1420520 AT3G07810.1 28.743 167 112 4 113 276 4 166 1.37e-11 65.5
Msa1420520 AT5G55550.5 25.269 186 120 5 113 285 4 183 1.47e-11 65.5
Msa1420520 AT5G55550.4 25.269 186 120 5 113 285 4 183 1.47e-11 65.5
Msa1420520 AT5G55550.9 25.269 186 120 5 113 285 4 183 1.47e-11 65.5
Msa1420520 AT5G55550.7 25.269 186 120 5 113 285 4 183 1.47e-11 65.5
Msa1420520 AT5G55550.1 25.269 186 120 5 113 285 4 183 1.47e-11 65.5
Msa1420520 AT2G16940.5 25.116 215 146 5 79 292 17 217 1.69e-11 65.1
Msa1420520 AT2G16940.4 25.116 215 146 5 79 292 17 217 1.69e-11 65.1
Msa1420520 AT5G64200.2 39.583 96 58 0 111 206 12 107 2.09e-11 64.3
Msa1420520 AT5G64200.1 39.583 96 58 0 111 206 12 107 2.09e-11 64.3
Msa1420520 AT5G47320.1 38.372 86 51 1 219 304 32 115 4.27e-11 62.0
Msa1420520 AT4G39260.4 38.095 63 39 0 218 280 6 68 4.52e-11 59.3
Msa1420520 AT3G13224.2 24.742 194 125 4 115 303 19 196 7.80e-11 62.8

Find 112 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTGAGATTGAAGGGTTTA+TGG 0.179399 tig0024822:-45043 None:intergenic
CCATTTCACTACTCAATTCT+TGG 0.181510 tig0024822:+44882 Msa1420520:five_prime_UTR
TTTGGTTTATCAGAGGTTTC+TGG 0.183455 tig0024822:-45206 None:intergenic
CCGGCCGTTGCGATTGAATT+TGG 0.193724 tig0024822:+46641 Msa1420520:CDS
TGCTGAACAGCCAGGCTTAC+TGG 0.195504 tig0024822:+46386 Msa1420520:CDS
AATGGAAGATCTCGGGGTTT+TGG 0.242272 tig0024822:+46435 Msa1420520:CDS
AGGGGTTGATGTCAATTATA+TGG 0.280558 tig0024822:+46898 Msa1420520:three_prime_UTR
TTCTGTTCTTCATCTTGCTT+TGG 0.296823 tig0024822:-45224 None:intergenic
CAGTCCCCAACCAAGGTTTC+CGG 0.310988 tig0024822:-46337 None:intergenic
TTCAATGACTTCTTCACAAT+TGG 0.314912 tig0024822:+45298 Msa1420520:CDS
TTCTTCAAGTTGGGAAACTA+TGG 0.330220 tig0024822:-45159 None:intergenic
ATTGAAGGGTTTATGGGAAA+TGG 0.332412 tig0024822:-45036 None:intergenic
TGATAGATAATATAACTTAT+AGG 0.334049 tig0024822:-46816 None:intergenic
TGTACTTACCACACCGTTCA+TGG 0.342393 tig0024822:-46505 None:intergenic
ACTAACCTTTCACCTCCTTT+TGG 0.342769 tig0024822:-46252 None:intergenic
CCAAGAATTGAGTAGTGAAA+TGG 0.346997 tig0024822:-44882 None:intergenic
CTGGTTCTGGTTCTTCAAGT+TGG 0.348111 tig0024822:-45169 None:intergenic
AGTTGTGAGATGTATCTATA+AGG 0.353962 tig0024822:+46878 Msa1420520:three_prime_UTR
GGTGAGATTGAAGGGTTTAT+GGG 0.357189 tig0024822:-45042 None:intergenic
TGGTTCTGGTTCTTCAAGTT+GGG 0.361409 tig0024822:-45168 None:intergenic
GAAGCAATTCGAATGTTTGA+TGG 0.364675 tig0024822:+45587 Msa1420520:CDS
TATACACTAACTAGACTTTC+CGG 0.375066 tig0024822:+46854 Msa1420520:three_prime_UTR
TTGAAGGGTTTATGGGAAAT+GGG 0.380980 tig0024822:-45035 None:intergenic
GTGGCATCAATTGTTGAGTT+GGG 0.386950 tig0024822:-44844 None:intergenic
ATTGAAACTTTGAGACTTGA+GGG 0.394912 tig0024822:-45063 None:intergenic
GAGTCTTCCAGCATCGTCTA+AGG 0.404520 tig0024822:-45255 None:intergenic
GTTGTGAGATGTATCTATAA+GGG 0.411194 tig0024822:+46879 Msa1420520:three_prime_UTR
ATCTATCAAACTAGTCATAC+TGG 0.411868 tig0024822:+46831 Msa1420520:three_prime_UTR
GGAGGTGAAAGGTTAGTAAT+GGG 0.413296 tig0024822:+46258 Msa1420520:CDS
AATGGGTCTTTGAGGGAAGT+TGG 0.413952 tig0024822:-45018 None:intergenic
TATGGGAAATGGGTCTTTGA+GGG 0.415795 tig0024822:-45025 None:intergenic
TATCTTTGTCACCTATCAAA+TGG 0.420814 tig0024822:+44815 Msa1420520:five_prime_UTR
AGACTTGAGGGTGAGATTGA+AGG 0.426724 tig0024822:-45051 None:intergenic
AAATGATAACCTTCTCTTGA+GGG 0.434451 tig0024822:+46991 Msa1420520:three_prime_UTR
GAAGGGAAGGAAAGCAATCA+AGG 0.435297 tig0024822:+44754 None:intergenic
GACTTGAGGGTGAGATTGAA+GGG 0.441582 tig0024822:-45050 None:intergenic
GCTGAACAGCCAGGCTTACT+GGG 0.446466 tig0024822:+46387 Msa1420520:CDS
TTATGGGAAATGGGTCTTTG+AGG 0.453800 tig0024822:-45026 None:intergenic
CAAGAATTGAGTAGTGAAAT+GGG 0.457008 tig0024822:-44881 None:intergenic
CTATGCCGGAAACCTTGGTT+GGG 0.458422 tig0024822:+46332 Msa1420520:CDS
GTTGGTGGTGGTGAGAGAAA+TGG 0.468222 tig0024822:-45000 None:intergenic
TCTTTGAGGGAAGTTGGTGG+TGG 0.468331 tig0024822:-45012 None:intergenic
TTTGATAGGTGACAAAGATA+AGG 0.469659 tig0024822:-44812 None:intergenic
AAGATCTATGCCGGAAACCT+TGG 0.470085 tig0024822:+46327 Msa1420520:CDS
ATATAACTTATAGGAGGAAA+AGG 0.471261 tig0024822:-46807 None:intergenic
TCTTCAATTACTGGAGGAGA+TGG 0.482825 tig0024822:-46681 None:intergenic
ACCTTAGCACCCAGTAAGCC+TGG 0.485093 tig0024822:-46396 None:intergenic
GAGGGACAATGGAAGATCTC+GGG 0.485772 tig0024822:+46428 Msa1420520:CDS
TGAAACTGCTGAGCATTTGG+AGG 0.489835 tig0024822:+46470 Msa1420520:CDS
GATTGAAACTTTGAGACTTG+AGG 0.492601 tig0024822:-45064 None:intergenic
AATCAAGGGAGAGGAACAAT+TGG 0.500363 tig0024822:+44769 Msa1420520:five_prime_UTR
TGTGAAGAAGTCATTGAAAA+CGG 0.503416 tig0024822:-45293 None:intergenic
GATGCCTTTGCTGAACAGCC+AGG 0.508427 tig0024822:+46378 Msa1420520:CDS
AATCATCTTTCTTCACGTGC+TGG 0.510076 tig0024822:-46748 None:intergenic
TGCAATGATATACAGCAAGT+TGG 0.512442 tig0024822:+46195 Msa1420520:intron
ATTATTAGCTCATCAAACTC+TGG 0.513244 tig0024822:-46945 None:intergenic
CCAAATTCAATCGCAACGGC+CGG 0.515657 tig0024822:-46641 None:intergenic
GGGTCTTTGAGGGAAGTTGG+TGG 0.516382 tig0024822:-45015 None:intergenic
GAGGGTGAAGAGATTGAAGT+GGG 0.520228 tig0024822:-45097 None:intergenic
AGAGGGACAATGGAAGATCT+CGG 0.522954 tig0024822:+46427 Msa1420520:CDS
GTAACAACCTTAGACGATGC+TGG 0.523165 tig0024822:+45248 Msa1420520:CDS
TAGATACATCTCACAACTGC+CGG 0.523547 tig0024822:-46873 None:intergenic
GCCAGGCTTACTGGGTGCTA+AGG 0.524031 tig0024822:+46395 Msa1420520:CDS
ATCTTGCTTTGGTTTATCAG+AGG 0.528721 tig0024822:-45213 None:intergenic
TCATCTGTGGCAACGAATGG+AGG 0.531859 tig0024822:-45116 None:intergenic
TCTATGCCGGAAACCTTGGT+TGG 0.535060 tig0024822:+46331 Msa1420520:CDS
GGAGGGTGAAGAGATTGAAG+TGG 0.537121 tig0024822:-45098 None:intergenic
TAGTGTTTAAATAGATGCGA+AGG 0.538430 tig0024822:+47021 Msa1420520:three_prime_UTR
TGGCATCAATTGTTGAGTTG+GGG 0.541038 tig0024822:-44843 None:intergenic
AGGAGGTGAAAGGTTAGTAA+TGG 0.541569 tig0024822:+46257 Msa1420520:CDS
GAAATGATAACCTTCTCTTG+AGG 0.541771 tig0024822:+46990 Msa1420520:three_prime_UTR
TGTGGCATCAATTGTTGAGT+TGG 0.543007 tig0024822:-44845 None:intergenic
GCATCAATTGTTGAGTTGGG+GGG 0.543503 tig0024822:-44841 None:intergenic
GGCATCAATTGTTGAGTTGG+GGG 0.544127 tig0024822:-44842 None:intergenic
TGGCACAGTTGTGTCTGTTG+AGG 0.545137 tig0024822:+45340 Msa1420520:CDS
AACTTCCCAGAAGTGCCAAA+AGG 0.552002 tig0024822:+46237 Msa1420520:CDS
AATTCATCTGTGGCAACGAA+TGG 0.552971 tig0024822:-45119 None:intergenic
AGCCCTCACAAGATCTATGC+CGG 0.567319 tig0024822:+46318 Msa1420520:CDS
TGGTTGGGGACTGAACTCTC+AGG 0.577275 tig0024822:+46347 Msa1420520:CDS
AAGGAAAGCAATCAAGGGAG+AGG 0.577296 tig0024822:+44760 None:intergenic
GTCATCTATGAGAGGGACAA+TGG 0.578967 tig0024822:+46417 Msa1420520:CDS
GATGCTGGAAGACTCTATGT+TGG 0.579187 tig0024822:+45263 Msa1420520:CDS
TGGAAGAGTGTGTGAATGAG+AGG 0.581907 tig0024822:-44980 None:intergenic
TGCAAATCCTCTGCTTCTGT+CGG 0.584206 tig0024822:-45531 None:intergenic
AATGATATACAGCAAGTTGG+TGG 0.588262 tig0024822:+46198 Msa1420520:intron
TGCTAAGGTCATCTATGAGA+GGG 0.594561 tig0024822:+46410 Msa1420520:CDS
GCTGCTTTGAACGCCATGAA+CGG 0.600524 tig0024822:+46492 Msa1420520:CDS
ATATACAGCAAGTTGGTGGT+AGG 0.600597 tig0024822:+46202 Msa1420520:intron
TTTCCGGCATAGATCTTGTG+AGG 0.602123 tig0024822:-46321 None:intergenic
TATTTAATACCCTCAAGAGA+AGG 0.610124 tig0024822:-47000 None:intergenic
TATGCCGGAAACCTTGGTTG+GGG 0.610260 tig0024822:+46333 Msa1420520:CDS
CGAGTTACCGACAGAAGCAG+AGG 0.610690 tig0024822:+45524 Msa1420520:CDS
TAGATAATATAACTTATAGG+AGG 0.614619 tig0024822:-46813 None:intergenic
TAAGCCTGGCTGTTCAGCAA+AGG 0.618059 tig0024822:-46382 None:intergenic
AAGTGCCAAAAGGAGGTGAA+AGG 0.618488 tig0024822:+46247 Msa1420520:CDS
CATCTGTGGCAACGAATGGA+GGG 0.620430 tig0024822:-45115 None:intergenic
AGTTGGTGGTAGGAGTGCTA+AGG 0.622193 tig0024822:+46212 Msa1420520:CDS
AAGGGAAGGAAAGCAATCAA+GGG 0.622467 tig0024822:+44755 None:intergenic
TTGTGAGATGTATCTATAAG+GGG 0.624673 tig0024822:+46880 Msa1420520:three_prime_UTR
AGTGTTTAAATAGATGCGAA+GGG 0.627349 tig0024822:+47022 Msa1420520:three_prime_UTR
GAGAGTTCAGTCCCCAACCA+AGG 0.628580 tig0024822:-46344 None:intergenic
GTGCTAAGGTCATCTATGAG+AGG 0.629825 tig0024822:+46409 Msa1420520:CDS
TTCCGGCATAGATCTTGTGA+GGG 0.633745 tig0024822:-46320 None:intergenic
GCAGCCAAATTCAATCGCAA+CGG 0.634188 tig0024822:-46645 None:intergenic
TTCCCAGAAGTGCCAAAAGG+AGG 0.636421 tig0024822:+46240 Msa1420520:CDS
AAAGTAAGGAACAGCTACAG+AGG 0.638782 tig0024822:+46285 Msa1420520:CDS
AGATGTTTGAAATTCATCTG+TGG 0.653328 tig0024822:-45129 None:intergenic
GAGGTGAAAGGTTAGTAATG+GGG 0.654669 tig0024822:+46259 Msa1420520:CDS
AGGGACAATGGAAGATCTCG+GGG 0.654949 tig0024822:+46429 Msa1420520:CDS
ATGGGAGAAGTGTTGTAATG+TGG 0.671093 tig0024822:-44863 None:intergenic
GATTGAATTTGGCTGCAGCG+AGG 0.729863 tig0024822:+46652 Msa1420520:CDS
TTTGAACGCCATGAACGGTG+TGG 0.764216 tig0024822:+46497 Msa1420520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTAAATAATCAATTTATC+AGG + tig0024822:46069-46088 Msa1420520:intron 15.0%
!! TGATAGATAATATAACTTAT+AGG - tig0024822:46819-46838 None:intergenic 15.0%
!! ATCTAAATAATCAATTTATC+AGG + tig0024822:46069-46088 Msa1420520:intron 15.0%
!! TGATAGATAATATAACTTAT+AGG - tig0024822:46819-46838 None:intergenic 15.0%
!!! TACTTAGTTTTATTTGATTC+AGG + tig0024822:45636-45655 Msa1420520:intron 20.0%
!!! TTTGTATTTTCTTCAATTAC+TGG - tig0024822:46693-46712 None:intergenic 20.0%
!! AATACAAAAAACAATGTTGA+AGG + tig0024822:46705-46724 Msa1420520:CDS 20.0%
!! TAGATAATATAACTTATAGG+AGG - tig0024822:46816-46835 None:intergenic 20.0%
!!! TACTTAGTTTTATTTGATTC+AGG + tig0024822:45636-45655 Msa1420520:intron 20.0%
!!! TTTGTATTTTCTTCAATTAC+TGG - tig0024822:46693-46712 None:intergenic 20.0%
!! AATACAAAAAACAATGTTGA+AGG + tig0024822:46705-46724 Msa1420520:CDS 20.0%
!! TAGATAATATAACTTATAGG+AGG - tig0024822:46816-46835 None:intergenic 20.0%
! ACTCAAAAAACAAAACACAA+TGG + tig0024822:44908-44927 Msa1420520:exon 25.0%
!! TTATTTGATTCAGGTTTCAT+AGG + tig0024822:45645-45664 Msa1420520:intron 25.0%
! AAGTATTTACTATTGTGACT+TGG + tig0024822:45718-45737 Msa1420520:intron 25.0%
! AAAGAAAGAGATATATTTGC+TGG - tig0024822:45831-45850 None:intergenic 25.0%
!! TTATCAGGATCTTTTATAGT+TGG + tig0024822:46084-46103 Msa1420520:intron 25.0%
!!! TTTGTTTTGCAATTTCAAGT+TGG + tig0024822:46542-46561 Msa1420520:intron 25.0%
! ATATAACTTATAGGAGGAAA+AGG - tig0024822:46810-46829 None:intergenic 25.0%
! ACTCAAAAAACAAAACACAA+TGG + tig0024822:44908-44927 Msa1420520:exon 25.0%
!! TTATTTGATTCAGGTTTCAT+AGG + tig0024822:45645-45664 Msa1420520:intron 25.0%
! AAGTATTTACTATTGTGACT+TGG + tig0024822:45718-45737 Msa1420520:intron 25.0%
! AAAGAAAGAGATATATTTGC+TGG - tig0024822:45831-45850 None:intergenic 25.0%
!! TTATCAGGATCTTTTATAGT+TGG + tig0024822:46084-46103 Msa1420520:intron 25.0%
!!! TTTGTTTTGCAATTTCAAGT+TGG + tig0024822:46542-46561 Msa1420520:intron 25.0%
! ATATAACTTATAGGAGGAAA+AGG - tig0024822:46810-46829 None:intergenic 25.0%
TTTGATAGGTGACAAAGATA+AGG - tig0024822:44815-44834 None:intergenic 30.0%
TATCTTTGTCACCTATCAAA+TGG + tig0024822:44815-44834 Msa1420520:five_prime_UTR 30.0%
CAAGAATTGAGTAGTGAAAT+GGG - tig0024822:44884-44903 None:intergenic 30.0%
!! ATTGAAACTTTGAGACTTGA+GGG - tig0024822:45066-45085 None:intergenic 30.0%
! AGATGTTTGAAATTCATCTG+TGG - tig0024822:45132-45151 None:intergenic 30.0%
TGTGAAGAAGTCATTGAAAA+CGG - tig0024822:45296-45315 None:intergenic 30.0%
TTCAATGACTTCTTCACAAT+TGG + tig0024822:45298-45317 Msa1420520:CDS 30.0%
TTACTGTTGTCTGTTTGATT+AGG + tig0024822:45412-45431 Msa1420520:intron 30.0%
!!! GGATTTTTTTTTTGTGTGTG+TGG + tig0024822:45433-45452 Msa1420520:intron 30.0%
! TTTTGTGTGTGTGGATTTTA+TGG + tig0024822:45442-45461 Msa1420520:intron 30.0%
! TGTTGTGTGTTTCATCATTT+TGG + tig0024822:45789-45808 Msa1420520:intron 30.0%
TTTAATAGTTGTCGCAGTAA+TGG + tig0024822:45849-45868 Msa1420520:intron 30.0%
TGCAATTCTCTGTCATATAA+AGG - tig0024822:45893-45912 None:intergenic 30.0%
! TTTGATTAGAGTATGGACTA+GGG - tig0024822:46024-46043 None:intergenic 30.0%
! TCAAAGCTTTGATTAGAGTA+TGG - tig0024822:46031-46050 None:intergenic 30.0%
!!! AGTTGGTTTTATGCAAAGTT+AGG + tig0024822:46101-46120 Msa1420520:intron 30.0%
! TAATGTGATGCAATGTTTTC+AGG + tig0024822:46608-46627 Msa1420520:intron 30.0%
! GTATTTTCTTCAATTACTGG+AGG - tig0024822:46690-46709 None:intergenic 30.0%
AAAAAACAATGTTGAAGGCT+CGG + tig0024822:46710-46729 Msa1420520:CDS 30.0%
! CTAAATGATGTGTATTTTCC+GGG - tig0024822:46787-46806 None:intergenic 30.0%
! GCTAAATGATGTGTATTTTC+CGG - tig0024822:46788-46807 None:intergenic 30.0%
ATCTATCAAACTAGTCATAC+TGG + tig0024822:46831-46850 Msa1420520:three_prime_UTR 30.0%
TATACACTAACTAGACTTTC+CGG + tig0024822:46854-46873 Msa1420520:three_prime_UTR 30.0%
AGTTGTGAGATGTATCTATA+AGG + tig0024822:46878-46897 Msa1420520:three_prime_UTR 30.0%
GTTGTGAGATGTATCTATAA+GGG + tig0024822:46879-46898 Msa1420520:three_prime_UTR 30.0%
TTGTGAGATGTATCTATAAG+GGG + tig0024822:46880-46899 Msa1420520:three_prime_UTR 30.0%
ATTATTAGCTCATCAAACTC+TGG - tig0024822:46948-46967 None:intergenic 30.0%
AAATGATAACCTTCTCTTGA+GGG + tig0024822:46991-47010 Msa1420520:three_prime_UTR 30.0%
TATTTAATACCCTCAAGAGA+AGG - tig0024822:47003-47022 None:intergenic 30.0%
TAGTGTTTAAATAGATGCGA+AGG + tig0024822:47021-47040 Msa1420520:three_prime_UTR 30.0%
AGTGTTTAAATAGATGCGAA+GGG + tig0024822:47022-47041 Msa1420520:three_prime_UTR 30.0%
TATTAGCATAATCTCAGAGA+CGG + tig0024822:47055-47074 Msa1420520:three_prime_UTR 30.0%
TTTGATAGGTGACAAAGATA+AGG - tig0024822:44815-44834 None:intergenic 30.0%
TATCTTTGTCACCTATCAAA+TGG + tig0024822:44815-44834 Msa1420520:five_prime_UTR 30.0%
CAAGAATTGAGTAGTGAAAT+GGG - tig0024822:44884-44903 None:intergenic 30.0%
!! ATTGAAACTTTGAGACTTGA+GGG - tig0024822:45066-45085 None:intergenic 30.0%
! AGATGTTTGAAATTCATCTG+TGG - tig0024822:45132-45151 None:intergenic 30.0%
TGTGAAGAAGTCATTGAAAA+CGG - tig0024822:45296-45315 None:intergenic 30.0%
TTCAATGACTTCTTCACAAT+TGG + tig0024822:45298-45317 Msa1420520:CDS 30.0%
TTACTGTTGTCTGTTTGATT+AGG + tig0024822:45412-45431 Msa1420520:intron 30.0%
!!! GGATTTTTTTTTTGTGTGTG+TGG + tig0024822:45433-45452 Msa1420520:intron 30.0%
! TTTTGTGTGTGTGGATTTTA+TGG + tig0024822:45442-45461 Msa1420520:intron 30.0%
! TGTTGTGTGTTTCATCATTT+TGG + tig0024822:45789-45808 Msa1420520:intron 30.0%
TTTAATAGTTGTCGCAGTAA+TGG + tig0024822:45849-45868 Msa1420520:intron 30.0%
TGCAATTCTCTGTCATATAA+AGG - tig0024822:45893-45912 None:intergenic 30.0%
! TTTGATTAGAGTATGGACTA+GGG - tig0024822:46024-46043 None:intergenic 30.0%
! TCAAAGCTTTGATTAGAGTA+TGG - tig0024822:46031-46050 None:intergenic 30.0%
!!! AGTTGGTTTTATGCAAAGTT+AGG + tig0024822:46101-46120 Msa1420520:intron 30.0%
! TAATGTGATGCAATGTTTTC+AGG + tig0024822:46608-46627 Msa1420520:intron 30.0%
! GTATTTTCTTCAATTACTGG+AGG - tig0024822:46690-46709 None:intergenic 30.0%
AAAAAACAATGTTGAAGGCT+CGG + tig0024822:46710-46729 Msa1420520:CDS 30.0%
! CTAAATGATGTGTATTTTCC+GGG - tig0024822:46787-46806 None:intergenic 30.0%
! GCTAAATGATGTGTATTTTC+CGG - tig0024822:46788-46807 None:intergenic 30.0%
ATCTATCAAACTAGTCATAC+TGG + tig0024822:46831-46850 Msa1420520:three_prime_UTR 30.0%
TATACACTAACTAGACTTTC+CGG + tig0024822:46854-46873 Msa1420520:three_prime_UTR 30.0%
AGTTGTGAGATGTATCTATA+AGG + tig0024822:46878-46897 Msa1420520:three_prime_UTR 30.0%
GTTGTGAGATGTATCTATAA+GGG + tig0024822:46879-46898 Msa1420520:three_prime_UTR 30.0%
TTGTGAGATGTATCTATAAG+GGG + tig0024822:46880-46899 Msa1420520:three_prime_UTR 30.0%
ATTATTAGCTCATCAAACTC+TGG - tig0024822:46948-46967 None:intergenic 30.0%
AAATGATAACCTTCTCTTGA+GGG + tig0024822:46991-47010 Msa1420520:three_prime_UTR 30.0%
TATTTAATACCCTCAAGAGA+AGG - tig0024822:47003-47022 None:intergenic 30.0%
TAGTGTTTAAATAGATGCGA+AGG + tig0024822:47021-47040 Msa1420520:three_prime_UTR 30.0%
AGTGTTTAAATAGATGCGAA+GGG + tig0024822:47022-47041 Msa1420520:three_prime_UTR 30.0%
CCAAGAATTGAGTAGTGAAA+TGG - tig0024822:44885-44904 None:intergenic 35.0%
CCATTTCACTACTCAATTCT+TGG + tig0024822:44882-44901 Msa1420520:five_prime_UTR 35.0%
TTGAAGGGTTTATGGGAAAT+GGG - tig0024822:45038-45057 None:intergenic 35.0%
ATTGAAGGGTTTATGGGAAA+TGG - tig0024822:45039-45058 None:intergenic 35.0%
!! GATTGAAACTTTGAGACTTG+AGG - tig0024822:45067-45086 None:intergenic 35.0%
!! TTCTTCAAGTTGGGAAACTA+TGG - tig0024822:45162-45181 None:intergenic 35.0%
!!! TCTGTTTTTTGTTCTGGTTC+TGG - tig0024822:45185-45204 None:intergenic 35.0%
!!! TCTGGTTCTGTTTTTTGTTC+TGG - tig0024822:45191-45210 None:intergenic 35.0%
! TTTGGTTTATCAGAGGTTTC+TGG - tig0024822:45209-45228 None:intergenic 35.0%
! ATCTTGCTTTGGTTTATCAG+AGG - tig0024822:45216-45235 None:intergenic 35.0%
TTCTGTTCTTCATCTTGCTT+TGG - tig0024822:45227-45246 None:intergenic 35.0%
GAAGCAATTCGAATGTTTGA+TGG + tig0024822:45587-45606 Msa1420520:CDS 35.0%
! TTTGATTCAGGTTTCATAGG+AGG + tig0024822:45648-45667 Msa1420520:intron 35.0%
! TTGATTCAGGTTTCATAGGA+GGG + tig0024822:45649-45668 Msa1420520:intron 35.0%
! GTGTGTTTCATCATTTTGGA+TGG + tig0024822:45793-45812 Msa1420520:intron 35.0%
TGGTTGCAAAAACTGCAAAA+CGG - tig0024822:45948-45967 None:intergenic 35.0%
!! TGGACTAGGGCTTTAAATAA+AGG - tig0024822:46011-46030 None:intergenic 35.0%
CTTTGATTAGAGTATGGACT+AGG - tig0024822:46025-46044 None:intergenic 35.0%
TGCAATGATATACAGCAAGT+TGG + tig0024822:46195-46214 Msa1420520:intron 35.0%
! AATGATATACAGCAAGTTGG+TGG + tig0024822:46198-46217 Msa1420520:intron 35.0%
! TAGTAATGGGGCAAAAAGTA+AGG + tig0024822:46271-46290 Msa1420520:CDS 35.0%
!!! TTTTGAAACTGCTGAGCATT+TGG + tig0024822:46467-46486 Msa1420520:CDS 35.0%
AACATTGCATCACATTAGCA+AGG - tig0024822:46605-46624 None:intergenic 35.0%
! TGATTGATCAAAGTTTTGCC+CGG + tig0024822:46766-46785 Msa1420520:three_prime_UTR 35.0%
!! AGGGGTTGATGTCAATTATA+TGG + tig0024822:46898-46917 Msa1420520:three_prime_UTR 35.0%
GAAATGATAACCTTCTCTTG+AGG + tig0024822:46990-47009 Msa1420520:three_prime_UTR 35.0%
CCAAGAATTGAGTAGTGAAA+TGG - tig0024822:44885-44904 None:intergenic 35.0%
CCATTTCACTACTCAATTCT+TGG + tig0024822:44882-44901 Msa1420520:five_prime_UTR 35.0%
TTGAAGGGTTTATGGGAAAT+GGG - tig0024822:45038-45057 None:intergenic 35.0%
ATTGAAGGGTTTATGGGAAA+TGG - tig0024822:45039-45058 None:intergenic 35.0%
!! GATTGAAACTTTGAGACTTG+AGG - tig0024822:45067-45086 None:intergenic 35.0%
!! TTCTTCAAGTTGGGAAACTA+TGG - tig0024822:45162-45181 None:intergenic 35.0%
!!! TCTGTTTTTTGTTCTGGTTC+TGG - tig0024822:45185-45204 None:intergenic 35.0%
!!! TCTGGTTCTGTTTTTTGTTC+TGG - tig0024822:45191-45210 None:intergenic 35.0%
! TTTGGTTTATCAGAGGTTTC+TGG - tig0024822:45209-45228 None:intergenic 35.0%
! ATCTTGCTTTGGTTTATCAG+AGG - tig0024822:45216-45235 None:intergenic 35.0%
TTCTGTTCTTCATCTTGCTT+TGG - tig0024822:45227-45246 None:intergenic 35.0%
GAAGCAATTCGAATGTTTGA+TGG + tig0024822:45587-45606 Msa1420520:CDS 35.0%
! TTTGATTCAGGTTTCATAGG+AGG + tig0024822:45648-45667 Msa1420520:intron 35.0%
! TTGATTCAGGTTTCATAGGA+GGG + tig0024822:45649-45668 Msa1420520:intron 35.0%
! GTGTGTTTCATCATTTTGGA+TGG + tig0024822:45793-45812 Msa1420520:intron 35.0%
TGGTTGCAAAAACTGCAAAA+CGG - tig0024822:45948-45967 None:intergenic 35.0%
!! TGGACTAGGGCTTTAAATAA+AGG - tig0024822:46011-46030 None:intergenic 35.0%
CTTTGATTAGAGTATGGACT+AGG - tig0024822:46025-46044 None:intergenic 35.0%
TGCAATGATATACAGCAAGT+TGG + tig0024822:46195-46214 Msa1420520:intron 35.0%
! AATGATATACAGCAAGTTGG+TGG + tig0024822:46198-46217 Msa1420520:intron 35.0%
! TAGTAATGGGGCAAAAAGTA+AGG + tig0024822:46271-46290 Msa1420520:CDS 35.0%
!!! TTTTGAAACTGCTGAGCATT+TGG + tig0024822:46467-46486 Msa1420520:CDS 35.0%
AACATTGCATCACATTAGCA+AGG - tig0024822:46605-46624 None:intergenic 35.0%
! TGATTGATCAAAGTTTTGCC+CGG + tig0024822:46766-46785 Msa1420520:three_prime_UTR 35.0%
!! AGGGGTTGATGTCAATTATA+TGG + tig0024822:46898-46917 Msa1420520:three_prime_UTR 35.0%
GAAATGATAACCTTCTCTTG+AGG + tig0024822:46990-47009 Msa1420520:three_prime_UTR 35.0%
AATCAAGGGAGAGGAACAAT+TGG + tig0024822:44769-44788 Msa1420520:five_prime_UTR 40.0%
! TGGCATCAATTGTTGAGTTG+GGG - tig0024822:44846-44865 None:intergenic 40.0%
GTGGCATCAATTGTTGAGTT+GGG - tig0024822:44847-44866 None:intergenic 40.0%
TGTGGCATCAATTGTTGAGT+TGG - tig0024822:44848-44867 None:intergenic 40.0%
!! ATGGGAGAAGTGTTGTAATG+TGG - tig0024822:44866-44885 None:intergenic 40.0%
TATGGGAAATGGGTCTTTGA+GGG - tig0024822:45028-45047 None:intergenic 40.0%
TTATGGGAAATGGGTCTTTG+AGG - tig0024822:45029-45048 None:intergenic 40.0%
GGTGAGATTGAAGGGTTTAT+GGG - tig0024822:45045-45064 None:intergenic 40.0%
AATTCATCTGTGGCAACGAA+TGG - tig0024822:45122-45141 None:intergenic 40.0%
!! TGGTTCTGGTTCTTCAAGTT+GGG - tig0024822:45171-45190 None:intergenic 40.0%
! GTGACTTGGCAAAACAATGT+TGG + tig0024822:45732-45751 Msa1420520:intron 40.0%
CAGAGAATTGCAGTCAAATG+CGG + tig0024822:45901-45920 Msa1420520:intron 40.0%
!! ATATACAGCAAGTTGGTGGT+AGG + tig0024822:46202-46221 Msa1420520:intron 40.0%
! ACTAACCTTTCACCTCCTTT+TGG - tig0024822:46255-46274 None:intergenic 40.0%
AGGAGGTGAAAGGTTAGTAA+TGG + tig0024822:46257-46276 Msa1420520:CDS 40.0%
GGAGGTGAAAGGTTAGTAAT+GGG + tig0024822:46258-46277 Msa1420520:CDS 40.0%
GAGGTGAAAGGTTAGTAATG+GGG + tig0024822:46259-46278 Msa1420520:CDS 40.0%
AAAGTAAGGAACAGCTACAG+AGG + tig0024822:46285-46304 Msa1420520:CDS 40.0%
TGCTAAGGTCATCTATGAGA+GGG + tig0024822:46410-46429 Msa1420520:CDS 40.0%
!! TGTGATGCAATGTTTTCAGG+AGG + tig0024822:46611-46630 Msa1420520:intron 40.0%
!! CAATGTTTTCAGGAGGTTCA+AGG + tig0024822:46618-46637 Msa1420520:intron 40.0%
TCTTCAATTACTGGAGGAGA+TGG - tig0024822:46684-46703 None:intergenic 40.0%
AATCATCTTTCTTCACGTGC+TGG - tig0024822:46751-46770 None:intergenic 40.0%
TAGATACATCTCACAACTGC+CGG - tig0024822:46876-46895 None:intergenic 40.0%
AATCAAGGGAGAGGAACAAT+TGG + tig0024822:44769-44788 Msa1420520:five_prime_UTR 40.0%
! TGGCATCAATTGTTGAGTTG+GGG - tig0024822:44846-44865 None:intergenic 40.0%
GTGGCATCAATTGTTGAGTT+GGG - tig0024822:44847-44866 None:intergenic 40.0%
TGTGGCATCAATTGTTGAGT+TGG - tig0024822:44848-44867 None:intergenic 40.0%
!! ATGGGAGAAGTGTTGTAATG+TGG - tig0024822:44866-44885 None:intergenic 40.0%
TATGGGAAATGGGTCTTTGA+GGG - tig0024822:45028-45047 None:intergenic 40.0%
TTATGGGAAATGGGTCTTTG+AGG - tig0024822:45029-45048 None:intergenic 40.0%
GGTGAGATTGAAGGGTTTAT+GGG - tig0024822:45045-45064 None:intergenic 40.0%
AATTCATCTGTGGCAACGAA+TGG - tig0024822:45122-45141 None:intergenic 40.0%
!! TGGTTCTGGTTCTTCAAGTT+GGG - tig0024822:45171-45190 None:intergenic 40.0%
! GTGACTTGGCAAAACAATGT+TGG + tig0024822:45732-45751 Msa1420520:intron 40.0%
CAGAGAATTGCAGTCAAATG+CGG + tig0024822:45901-45920 Msa1420520:intron 40.0%
!! ATATACAGCAAGTTGGTGGT+AGG + tig0024822:46202-46221 Msa1420520:intron 40.0%
! ACTAACCTTTCACCTCCTTT+TGG - tig0024822:46255-46274 None:intergenic 40.0%
AGGAGGTGAAAGGTTAGTAA+TGG + tig0024822:46257-46276 Msa1420520:CDS 40.0%
GGAGGTGAAAGGTTAGTAAT+GGG + tig0024822:46258-46277 Msa1420520:CDS 40.0%
GAGGTGAAAGGTTAGTAATG+GGG + tig0024822:46259-46278 Msa1420520:CDS 40.0%
AAAGTAAGGAACAGCTACAG+AGG + tig0024822:46285-46304 Msa1420520:CDS 40.0%
TGCTAAGGTCATCTATGAGA+GGG + tig0024822:46410-46429 Msa1420520:CDS 40.0%
!! TGTGATGCAATGTTTTCAGG+AGG + tig0024822:46611-46630 Msa1420520:intron 40.0%
!! CAATGTTTTCAGGAGGTTCA+AGG + tig0024822:46618-46637 Msa1420520:intron 40.0%
TCTTCAATTACTGGAGGAGA+TGG - tig0024822:46684-46703 None:intergenic 40.0%
AATCATCTTTCTTCACGTGC+TGG - tig0024822:46751-46770 None:intergenic 40.0%
TAGATACATCTCACAACTGC+CGG - tig0024822:46876-46895 None:intergenic 40.0%
TTGGGGGGTTTCCATTTGAT+AGG - tig0024822:44829-44848 None:intergenic 45.0%
!! GCATCAATTGTTGAGTTGGG+GGG - tig0024822:44844-44863 None:intergenic 45.0%
!! GGCATCAATTGTTGAGTTGG+GGG - tig0024822:44845-44864 None:intergenic 45.0%
! TGGAAGAGTGTGTGAATGAG+AGG - tig0024822:44983-45002 None:intergenic 45.0%
! AATGGGTCTTTGAGGGAAGT+TGG - tig0024822:45021-45040 None:intergenic 45.0%
GGGTGAGATTGAAGGGTTTA+TGG - tig0024822:45046-45065 None:intergenic 45.0%
GACTTGAGGGTGAGATTGAA+GGG - tig0024822:45053-45072 None:intergenic 45.0%
AGACTTGAGGGTGAGATTGA+AGG - tig0024822:45054-45073 None:intergenic 45.0%
GAGGGTGAAGAGATTGAAGT+GGG - tig0024822:45100-45119 None:intergenic 45.0%
!! CTGGTTCTGGTTCTTCAAGT+TGG - tig0024822:45172-45191 None:intergenic 45.0%
GTAACAACCTTAGACGATGC+TGG + tig0024822:45248-45267 Msa1420520:CDS 45.0%
GATGCTGGAAGACTCTATGT+TGG + tig0024822:45263-45282 Msa1420520:CDS 45.0%
! GCTGAGATTTTTGCAGAAGC+TGG + tig0024822:45320-45339 Msa1420520:CDS 45.0%
TGCAAATCCTCTGCTTCTGT+CGG - tig0024822:45534-45553 None:intergenic 45.0%
! ATTCAGGTTTCATAGGAGGG+TGG + tig0024822:45652-45671 Msa1420520:intron 45.0%
! CTGCAAAACGGTTCTGATTG+AGG - tig0024822:45936-45955 None:intergenic 45.0%
AAAGGTCTACAGCCGCAATA+TGG - tig0024822:45993-46012 None:intergenic 45.0%
!! AACTTCCCAGAAGTGCCAAA+AGG + tig0024822:46237-46256 Msa1420520:CDS 45.0%
AAGTGCCAAAAGGAGGTGAA+AGG + tig0024822:46247-46266 Msa1420520:CDS 45.0%
TTCCGGCATAGATCTTGTGA+GGG - tig0024822:46323-46342 None:intergenic 45.0%
TTTCCGGCATAGATCTTGTG+AGG - tig0024822:46324-46343 None:intergenic 45.0%
AAGATCTATGCCGGAAACCT+TGG + tig0024822:46327-46346 Msa1420520:CDS 45.0%
GTGCTAAGGTCATCTATGAG+AGG + tig0024822:46409-46428 Msa1420520:CDS 45.0%
GTCATCTATGAGAGGGACAA+TGG + tig0024822:46417-46436 Msa1420520:CDS 45.0%
AGAGGGACAATGGAAGATCT+CGG + tig0024822:46427-46446 Msa1420520:CDS 45.0%
! AATGGAAGATCTCGGGGTTT+TGG + tig0024822:46435-46454 Msa1420520:CDS 45.0%
TGAAACTGCTGAGCATTTGG+AGG + tig0024822:46470-46489 Msa1420520:CDS 45.0%
TGTACTTACCACACCGTTCA+TGG - tig0024822:46508-46527 None:intergenic 45.0%
! CGGTGTGGTAAGTACAGTTT+TGG + tig0024822:46512-46531 Msa1420520:intron 45.0%
CATCACATTAGCAAGGAACG+AGG - tig0024822:46598-46617 None:intergenic 45.0%
GCAGCCAAATTCAATCGCAA+CGG - tig0024822:46648-46667 None:intergenic 45.0%
TTGGGGGGTTTCCATTTGAT+AGG - tig0024822:44829-44848 None:intergenic 45.0%
!! GCATCAATTGTTGAGTTGGG+GGG - tig0024822:44844-44863 None:intergenic 45.0%
!! GGCATCAATTGTTGAGTTGG+GGG - tig0024822:44845-44864 None:intergenic 45.0%
! TGGAAGAGTGTGTGAATGAG+AGG - tig0024822:44983-45002 None:intergenic 45.0%
! AATGGGTCTTTGAGGGAAGT+TGG - tig0024822:45021-45040 None:intergenic 45.0%
GGGTGAGATTGAAGGGTTTA+TGG - tig0024822:45046-45065 None:intergenic 45.0%
GACTTGAGGGTGAGATTGAA+GGG - tig0024822:45053-45072 None:intergenic 45.0%
AGACTTGAGGGTGAGATTGA+AGG - tig0024822:45054-45073 None:intergenic 45.0%
GAGGGTGAAGAGATTGAAGT+GGG - tig0024822:45100-45119 None:intergenic 45.0%
!! CTGGTTCTGGTTCTTCAAGT+TGG - tig0024822:45172-45191 None:intergenic 45.0%
GTAACAACCTTAGACGATGC+TGG + tig0024822:45248-45267 Msa1420520:CDS 45.0%
GATGCTGGAAGACTCTATGT+TGG + tig0024822:45263-45282 Msa1420520:CDS 45.0%
! GCTGAGATTTTTGCAGAAGC+TGG + tig0024822:45320-45339 Msa1420520:CDS 45.0%
TGCAAATCCTCTGCTTCTGT+CGG - tig0024822:45534-45553 None:intergenic 45.0%
! ATTCAGGTTTCATAGGAGGG+TGG + tig0024822:45652-45671 Msa1420520:intron 45.0%
! CTGCAAAACGGTTCTGATTG+AGG - tig0024822:45936-45955 None:intergenic 45.0%
AAAGGTCTACAGCCGCAATA+TGG - tig0024822:45993-46012 None:intergenic 45.0%
!! AACTTCCCAGAAGTGCCAAA+AGG + tig0024822:46237-46256 Msa1420520:CDS 45.0%
AAGTGCCAAAAGGAGGTGAA+AGG + tig0024822:46247-46266 Msa1420520:CDS 45.0%
TTCCGGCATAGATCTTGTGA+GGG - tig0024822:46323-46342 None:intergenic 45.0%
TTTCCGGCATAGATCTTGTG+AGG - tig0024822:46324-46343 None:intergenic 45.0%
AAGATCTATGCCGGAAACCT+TGG + tig0024822:46327-46346 Msa1420520:CDS 45.0%
GTGCTAAGGTCATCTATGAG+AGG + tig0024822:46409-46428 Msa1420520:CDS 45.0%
GTCATCTATGAGAGGGACAA+TGG + tig0024822:46417-46436 Msa1420520:CDS 45.0%
AGAGGGACAATGGAAGATCT+CGG + tig0024822:46427-46446 Msa1420520:CDS 45.0%
! AATGGAAGATCTCGGGGTTT+TGG + tig0024822:46435-46454 Msa1420520:CDS 45.0%
TGAAACTGCTGAGCATTTGG+AGG + tig0024822:46470-46489 Msa1420520:CDS 45.0%
TGTACTTACCACACCGTTCA+TGG - tig0024822:46508-46527 None:intergenic 45.0%
! CGGTGTGGTAAGTACAGTTT+TGG + tig0024822:46512-46531 Msa1420520:intron 45.0%
CATCACATTAGCAAGGAACG+AGG - tig0024822:46598-46617 None:intergenic 45.0%
GCAGCCAAATTCAATCGCAA+CGG - tig0024822:46648-46667 None:intergenic 45.0%
!! GTTGGTGGTGGTGAGAGAAA+TGG - tig0024822:45003-45022 None:intergenic 50.0%
!! TCTTTGAGGGAAGTTGGTGG+TGG - tig0024822:45015-45034 None:intergenic 50.0%
GGAGGGTGAAGAGATTGAAG+TGG - tig0024822:45101-45120 None:intergenic 50.0%
CATCTGTGGCAACGAATGGA+GGG - tig0024822:45118-45137 None:intergenic 50.0%
TCATCTGTGGCAACGAATGG+AGG - tig0024822:45119-45138 None:intergenic 50.0%
GAGTCTTCCAGCATCGTCTA+AGG - tig0024822:45258-45277 None:intergenic 50.0%
TGGCACAGTTGTGTCTGTTG+AGG + tig0024822:45340-45359 Msa1420520:CDS 50.0%
! GGTTCTGATTGAGGCCACAT+CGG - tig0024822:45927-45946 None:intergenic 50.0%
! GCTGCGACACAACAGTCTTT+TGG - tig0024822:45968-45987 None:intergenic 50.0%
!! AGTTGGTGGTAGGAGTGCTA+AGG + tig0024822:46212-46231 Msa1420520:CDS 50.0%
!! TTCCCAGAAGTGCCAAAAGG+AGG + tig0024822:46240-46259 Msa1420520:CDS 50.0%
! CACCTCCTTTTGGCACTTCT+GGG - tig0024822:46245-46264 None:intergenic 50.0%
! TCACCTCCTTTTGGCACTTC+TGG - tig0024822:46246-46265 None:intergenic 50.0%
AGCCCTCACAAGATCTATGC+CGG + tig0024822:46318-46337 Msa1420520:CDS 50.0%
TCTATGCCGGAAACCTTGGT+TGG + tig0024822:46331-46350 Msa1420520:CDS 50.0%
CTATGCCGGAAACCTTGGTT+GGG + tig0024822:46332-46351 Msa1420520:CDS 50.0%
TATGCCGGAAACCTTGGTTG+GGG + tig0024822:46333-46352 Msa1420520:CDS 50.0%
TAAGCCTGGCTGTTCAGCAA+AGG - tig0024822:46385-46404 None:intergenic 50.0%
GAGGGACAATGGAAGATCTC+GGG + tig0024822:46428-46447 Msa1420520:CDS 50.0%
AGGGACAATGGAAGATCTCG+GGG + tig0024822:46429-46448 Msa1420520:CDS 50.0%
! GCTGCTTTGAACGCCATGAA+CGG + tig0024822:46492-46511 Msa1420520:CDS 50.0%
TTTGAACGCCATGAACGGTG+TGG + tig0024822:46497-46516 Msa1420520:CDS 50.0%
!! GTTTTCAGGAGGTTCAAGGC+CGG + tig0024822:46622-46641 Msa1420520:intron 50.0%
CCAAATTCAATCGCAACGGC+CGG - tig0024822:46644-46663 None:intergenic 50.0%
GATTGAATTTGGCTGCAGCG+AGG + tig0024822:46652-46671 Msa1420520:CDS 50.0%
!! GTTGGTGGTGGTGAGAGAAA+TGG - tig0024822:45003-45022 None:intergenic 50.0%
!! TCTTTGAGGGAAGTTGGTGG+TGG - tig0024822:45015-45034 None:intergenic 50.0%
GGAGGGTGAAGAGATTGAAG+TGG - tig0024822:45101-45120 None:intergenic 50.0%
CATCTGTGGCAACGAATGGA+GGG - tig0024822:45118-45137 None:intergenic 50.0%
TCATCTGTGGCAACGAATGG+AGG - tig0024822:45119-45138 None:intergenic 50.0%
GAGTCTTCCAGCATCGTCTA+AGG - tig0024822:45258-45277 None:intergenic 50.0%
TGGCACAGTTGTGTCTGTTG+AGG + tig0024822:45340-45359 Msa1420520:CDS 50.0%
! GGTTCTGATTGAGGCCACAT+CGG - tig0024822:45927-45946 None:intergenic 50.0%
! GCTGCGACACAACAGTCTTT+TGG - tig0024822:45968-45987 None:intergenic 50.0%
!! AGTTGGTGGTAGGAGTGCTA+AGG + tig0024822:46212-46231 Msa1420520:CDS 50.0%
!! TTCCCAGAAGTGCCAAAAGG+AGG + tig0024822:46240-46259 Msa1420520:CDS 50.0%
! CACCTCCTTTTGGCACTTCT+GGG - tig0024822:46245-46264 None:intergenic 50.0%
! TCACCTCCTTTTGGCACTTC+TGG - tig0024822:46246-46265 None:intergenic 50.0%
AGCCCTCACAAGATCTATGC+CGG + tig0024822:46318-46337 Msa1420520:CDS 50.0%
TCTATGCCGGAAACCTTGGT+TGG + tig0024822:46331-46350 Msa1420520:CDS 50.0%
CTATGCCGGAAACCTTGGTT+GGG + tig0024822:46332-46351 Msa1420520:CDS 50.0%
TATGCCGGAAACCTTGGTTG+GGG + tig0024822:46333-46352 Msa1420520:CDS 50.0%
TAAGCCTGGCTGTTCAGCAA+AGG - tig0024822:46385-46404 None:intergenic 50.0%
GAGGGACAATGGAAGATCTC+GGG + tig0024822:46428-46447 Msa1420520:CDS 50.0%
AGGGACAATGGAAGATCTCG+GGG + tig0024822:46429-46448 Msa1420520:CDS 50.0%
! GCTGCTTTGAACGCCATGAA+CGG + tig0024822:46492-46511 Msa1420520:CDS 50.0%
TTTGAACGCCATGAACGGTG+TGG + tig0024822:46497-46516 Msa1420520:CDS 50.0%
!! GTTTTCAGGAGGTTCAAGGC+CGG + tig0024822:46622-46641 Msa1420520:intron 50.0%
CCAAATTCAATCGCAACGGC+CGG - tig0024822:46644-46663 None:intergenic 50.0%
GATTGAATTTGGCTGCAGCG+AGG + tig0024822:46652-46671 Msa1420520:CDS 50.0%
! GGGTCTTTGAGGGAAGTTGG+TGG - tig0024822:45018-45037 None:intergenic 55.0%
CGAGTTACCGACAGAAGCAG+AGG + tig0024822:45524-45543 Msa1420520:CDS 55.0%
GTGTCGCAGCCACCATATTG+CGG + tig0024822:45978-45997 Msa1420520:intron 55.0%
GGTCTACAGCCGCAATATGG+TGG - tig0024822:45990-46009 None:intergenic 55.0%
CAGTCCCCAACCAAGGTTTC+CGG - tig0024822:46340-46359 None:intergenic 55.0%
GAGAGTTCAGTCCCCAACCA+AGG - tig0024822:46347-46366 None:intergenic 55.0%
TGGTTGGGGACTGAACTCTC+AGG + tig0024822:46347-46366 Msa1420520:CDS 55.0%
GATGCCTTTGCTGAACAGCC+AGG + tig0024822:46378-46397 Msa1420520:CDS 55.0%
TGCTGAACAGCCAGGCTTAC+TGG + tig0024822:46386-46405 Msa1420520:CDS 55.0%
GCTGAACAGCCAGGCTTACT+GGG + tig0024822:46387-46406 Msa1420520:CDS 55.0%
ACCTTAGCACCCAGTAAGCC+TGG - tig0024822:46399-46418 None:intergenic 55.0%
CCGGCCGTTGCGATTGAATT+TGG + tig0024822:46641-46660 Msa1420520:CDS 55.0%
! GGGTCTTTGAGGGAAGTTGG+TGG - tig0024822:45018-45037 None:intergenic 55.0%
CGAGTTACCGACAGAAGCAG+AGG + tig0024822:45524-45543 Msa1420520:CDS 55.0%
GTGTCGCAGCCACCATATTG+CGG + tig0024822:45978-45997 Msa1420520:intron 55.0%
GGTCTACAGCCGCAATATGG+TGG - tig0024822:45990-46009 None:intergenic 55.0%
CAGTCCCCAACCAAGGTTTC+CGG - tig0024822:46340-46359 None:intergenic 55.0%
GAGAGTTCAGTCCCCAACCA+AGG - tig0024822:46347-46366 None:intergenic 55.0%
TGGTTGGGGACTGAACTCTC+AGG + tig0024822:46347-46366 Msa1420520:CDS 55.0%
GATGCCTTTGCTGAACAGCC+AGG + tig0024822:46378-46397 Msa1420520:CDS 55.0%
TGCTGAACAGCCAGGCTTAC+TGG + tig0024822:46386-46405 Msa1420520:CDS 55.0%
GCTGAACAGCCAGGCTTACT+GGG + tig0024822:46387-46406 Msa1420520:CDS 55.0%
ACCTTAGCACCCAGTAAGCC+TGG - tig0024822:46399-46418 None:intergenic 55.0%
CCGGCCGTTGCGATTGAATT+TGG + tig0024822:46641-46660 Msa1420520:CDS 55.0%
GCAGTCAAATGCGGCCGATG+TGG + tig0024822:45910-45929 Msa1420520:intron 60.0%
GCCAGGCTTACTGGGTGCTA+AGG + tig0024822:46395-46414 Msa1420520:CDS 60.0%
GCAGTCAAATGCGGCCGATG+TGG + tig0024822:45910-45929 Msa1420520:intron 60.0%
GCCAGGCTTACTGGGTGCTA+AGG + tig0024822:46395-46414 Msa1420520:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0024822 gene 44762 47075 44762 ID=Msa1420520;Name=Msa1420520
tig0024822 mRNA 44762 47075 44762 ID=Msa1420520-mRNA-1;Parent=Msa1420520;Name=Msa1420520-mRNA-1;_AED=0.09;_eAED=0.09;_QI=165|1|1|1|1|1|4|317|324
tig0024822 exon 44762 45361 44762 ID=Msa1420520-mRNA-1:exon:1541;Parent=Msa1420520-mRNA-1
tig0024822 exon 45512 45613 45512 ID=Msa1420520-mRNA-1:exon:1542;Parent=Msa1420520-mRNA-1
tig0024822 exon 46210 46518 46210 ID=Msa1420520-mRNA-1:exon:1543;Parent=Msa1420520-mRNA-1
tig0024822 exon 46630 47075 46630 ID=Msa1420520-mRNA-1:exon:1544;Parent=Msa1420520-mRNA-1
tig0024822 five_prime_UTR 44762 44926 44762 ID=Msa1420520-mRNA-1:five_prime_utr;Parent=Msa1420520-mRNA-1
tig0024822 CDS 44927 45361 44927 ID=Msa1420520-mRNA-1:cds;Parent=Msa1420520-mRNA-1
tig0024822 CDS 45512 45613 45512 ID=Msa1420520-mRNA-1:cds;Parent=Msa1420520-mRNA-1
tig0024822 CDS 46210 46518 46210 ID=Msa1420520-mRNA-1:cds;Parent=Msa1420520-mRNA-1
tig0024822 CDS 46630 46758 46630 ID=Msa1420520-mRNA-1:cds;Parent=Msa1420520-mRNA-1
tig0024822 three_prime_UTR 46759 47075 46759 ID=Msa1420520-mRNA-1:three_prime_utr;Parent=Msa1420520-mRNA-1
Gene Sequence

>Msa1420520

ATGGCTACTGCAACAGCTTATGTTTCATCTTCAATCTTCAATAGAATCAATAACCTCTCATTCACACACTCTTCCATTTCTCTCACCACCACCAACTTCCCTCAAAGACCCATTTCCCATAAACCCTTCAATCTCACCCTCAAGTCTCAAAGTTTCAATCTTTCATCTCTCCCACTTCAATCTCTTCACCCTCCATTCGTTGCCACAGATGAATTTCAAACATCTCAAGACACCATAGTTTCCCAACTTGAAGAACCAGAACCAGAACAAAAAACAGAACCAGAAACCTCTGATAAACCAAAGCAAGATGAAGAACAGAAAGTAACAACCTTAGACGATGCTGGAAGACTCTATGTTGGAAATTTGCCGTTTTCAATGACTTCTTCACAATTGGCTGAGATTTTTGCAGAAGCTGGCACAGTTGTGTCTGTTGAGATTGTGTATGATCGAGTTACCGACAGAAGCAGAGGATTTGCATTTGTTACGATGAAAAGTGCTGAAGAAGCTAAAGAAGCAATTCGAATGTTTGATGGCTCTCAAGTTGGTGGTAGGAGTGCTAAGGTAAACTTCCCAGAAGTGCCAAAAGGAGGTGAAAGGTTAGTAATGGGGCAAAAAGTAAGGAACAGCTACAGAGGCTTTGTAGACAGCCCTCACAAGATCTATGCCGGAAACCTTGGTTGGGGACTGAACTCTCAGGATCTTAGAGATGCCTTTGCTGAACAGCCAGGCTTACTGGGTGCTAAGGTCATCTATGAGAGGGACAATGGAAGATCTCGGGGTTTTGGATTTGTCACTTTTGAAACTGCTGAGCATTTGGAGGCTGCTTTGAACGCCATGAACGGTGTGGAGGTTCAAGGCCGGCCGTTGCGATTGAATTTGGCTGCAGCGAGGATATCTCCATCTCCTCCAGTAATTGAAGAAAATACAAAAAACAATGTTGAAGGCTCGGAATTGATGTCTAGTGCCAGCACGTGA
Protein sequence

>Msa1420520

MATATAYVSSSIFNRINNLSFTHSSISLTTTNFPQRPISHKPFNLTLKSQSFNLSSLPLQSLHPPFVATDEFQTSQDTIVSQLEEPEPEQKTEPETSDKPKQDEEQKVTTLDDAGRLYVGNLPFSMTSSQLAEIFAEAGTVVSVEIVYDRVTDRSRGFAFVTMKSAEEAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMGQKVRNSYRGFVDSPHKIYAGNLGWGLNSQDLRDAFAEQPGLLGAKVIYERDNGRSRGFGFVTFETAEHLEAALNAMNGVEVQGRPLRLNLAAARISPSPPVIEENTKNNVEGSELMSSAST*