Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736860 | XP_003616274.1 | 100.000 | 137 | 0 | 0 | 1 | 137 | 48 | 184 | 3.49e-95 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736860 | sp|Q8W4C8|ARL8C_ARATH | 92.647 | 136 | 10 | 0 | 1 | 136 | 48 | 183 | 4.27e-93 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736860 | G7K1N4 | 100.000 | 137 | 0 | 0 | 1 | 137 | 48 | 184 | 1.66e-95 | 282 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031340 | Msa0736860 | 0.801512 | 8.695588e-49 | -8.615850e-47 |
| Msa0037880 | Msa0736860 | 0.817750 | 2.803860e-52 | -8.615850e-47 |
| Msa0068680 | Msa0736860 | 0.806595 | 7.621687e-50 | -8.615850e-47 |
| Msa0077610 | Msa0736860 | 0.806243 | 9.041105e-50 | -8.615850e-47 |
| Msa0089360 | Msa0736860 | 0.812756 | 3.611633e-51 | -8.615850e-47 |
| Msa0092990 | Msa0736860 | 0.826554 | 2.545898e-54 | -8.615850e-47 |
| Msa0096450 | Msa0736860 | 0.806855 | 6.715138e-50 | -8.615850e-47 |
| Msa0112750 | Msa0736860 | 0.813485 | 2.499801e-51 | -8.615850e-47 |
| Msa0117770 | Msa0736860 | 0.807943 | 3.949071e-50 | -8.615850e-47 |
| Msa0120340 | Msa0736860 | 0.804937 | 1.699239e-49 | -8.615850e-47 |
| Msa0610590 | Msa0736860 | 0.819817 | 9.517077e-53 | -8.615850e-47 |
| Msa0626090 | Msa0736860 | 0.801021 | 1.096057e-48 | -8.615850e-47 |
| Msa0633060 | Msa0736860 | 0.815607 | 8.479423e-52 | -8.615850e-47 |
| Msa0640510 | Msa0736860 | -0.821550 | 3.803897e-53 | -8.615850e-47 |
| Msa0651190 | Msa0736860 | 0.815737 | 7.928756e-52 | -8.615850e-47 |
| Msa0662650 | Msa0736860 | 0.825670 | 4.131241e-54 | -8.615850e-47 |
| Msa0672690 | Msa0736860 | 0.829513 | 4.934930e-55 | -8.615850e-47 |
| Msa0688070 | Msa0736860 | 0.821944 | 3.083921e-53 | -8.615850e-47 |
| Msa0693600 | Msa0736860 | 0.824129 | 9.541288e-54 | -8.615850e-47 |
| Msa0696640 | Msa0736860 | 0.814375 | 1.591027e-51 | -8.615850e-47 |
| Msa0698360 | Msa0736860 | 0.821991 | 3.007803e-53 | -8.615850e-47 |
| Msa0708860 | Msa0736860 | 0.829131 | 6.112648e-55 | -8.615850e-47 |
| Msa0736860 | Msa0744170 | -0.810229 | 1.279048e-50 | -8.615850e-47 |
| Msa0736860 | Msa0778520 | 0.846066 | 2.743052e-59 | -8.615850e-47 |
| Msa0736860 | Msa0788070 | -0.826892 | 2.113309e-54 | -8.615850e-47 |
| Msa0736860 | Msa0788710 | 0.812805 | 3.523299e-51 | -8.615850e-47 |
| Msa0736860 | Msa0869100 | 0.812952 | 3.272985e-51 | -8.615850e-47 |
| Msa0736860 | Msa0869120 | 0.823881 | 1.090570e-53 | -8.615850e-47 |
| Msa0736860 | Msa0876850 | -0.800902 | 1.158838e-48 | -8.615850e-47 |
| Msa0736860 | Msa0891600 | -0.800477 | 1.415358e-48 | -8.615850e-47 |
| Msa0736860 | Msa0910980 | -0.856696 | 2.701277e-62 | -8.615850e-47 |
| Msa0736860 | Msa0927670 | 0.829400 | 5.257065e-55 | -8.615850e-47 |
| Msa0736860 | Msa0931520 | 0.823166 | 1.603538e-53 | -8.615850e-47 |
| Msa0736860 | Msa0933230 | 0.814211 | 1.729278e-51 | -8.615850e-47 |
| Msa0736860 | Msa0933310 | 0.826176 | 3.132077e-54 | -8.615850e-47 |
| Msa0736860 | Msa0942080 | -0.804008 | 2.654502e-49 | -8.615850e-47 |
| Msa0736860 | Msa0969520 | 0.800694 | 1.278053e-48 | -8.615850e-47 |
| Msa0736860 | Msa0971090 | 0.823362 | 1.442769e-53 | -8.615850e-47 |
| Msa0736860 | Msa0999040 | 0.816964 | 4.214048e-52 | -8.615850e-47 |
| Msa0736860 | Msa1010350 | 0.816103 | 6.569787e-52 | -8.615850e-47 |
| Msa0736860 | Msa1015730 | 0.817722 | 2.845358e-52 | -8.615850e-47 |
| Msa0736860 | Msa1015790 | 0.835858 | 1.313940e-56 | -8.615850e-47 |
| Msa0736860 | Msa1032440 | 0.802886 | 4.534774e-49 | -8.615850e-47 |
| Msa0736860 | Msa1037700 | -0.811017 | 8.639319e-51 | -8.615850e-47 |
| Msa0736860 | Msa1039880 | 0.816537 | 5.254284e-52 | -8.615850e-47 |
| Msa0736860 | Msa1041730 | 0.800341 | 1.508589e-48 | -8.615850e-47 |
| Msa0736860 | Msa1044420 | 0.841954 | 3.474150e-58 | -8.615850e-47 |
| Msa0736860 | Msa1059570 | 0.801766 | 7.712384e-49 | -8.615850e-47 |
| Msa0736860 | Msa1071070 | 0.805383 | 1.370705e-49 | -8.615850e-47 |
| Msa0736860 | Msa1075080 | -0.833945 | 3.982846e-56 | -8.615850e-47 |
| Msa0736860 | Msa1075220 | -0.809444 | 1.886634e-50 | -8.615850e-47 |
| Msa0736860 | Msa1081590 | 0.801597 | 8.352536e-49 | -8.615850e-47 |
| Msa0736860 | Msa1082500 | 0.821116 | 4.789475e-53 | -8.615850e-47 |
| Msa0736860 | Msa1085300 | 0.800403 | 1.465073e-48 | -8.615850e-47 |
| Msa0736860 | Msa1092090 | 0.813584 | 2.377163e-51 | -8.615850e-47 |
| Msa0736860 | Msa1104610 | 0.811799 | 5.844725e-51 | -8.615850e-47 |
| Msa0736860 | Msa1124540 | -0.802846 | 4.622538e-49 | -8.615850e-47 |
| Msa0736860 | Msa1131220 | 0.807639 | 4.580657e-50 | -8.615850e-47 |
| Msa0736860 | Msa1148050 | 0.802050 | 6.741235e-49 | -8.615850e-47 |
| Msa0736860 | Msa1162550 | -0.801063 | 1.074187e-48 | -8.615850e-47 |
| Msa0736860 | Msa1172670 | 0.800059 | 1.721289e-48 | -8.615850e-47 |
| Msa0736860 | Msa1179460 | 0.807223 | 5.614341e-50 | -8.615850e-47 |
| Msa0736860 | Msa1217810 | 0.800447 | 1.434893e-48 | -8.615850e-47 |
| Msa0736860 | Msa1224480 | 0.824332 | 8.548507e-54 | -8.615850e-47 |
| Msa0736860 | Msa1233500 | 0.822180 | 2.718936e-53 | -8.615850e-47 |
| Msa0736860 | Msa1267520 | 0.807317 | 5.362995e-50 | -8.615850e-47 |
| Msa0736860 | Msa1276440 | 0.802598 | 5.198626e-49 | -8.615850e-47 |
| Msa0736860 | Msa1279210 | 0.816996 | 4.146564e-52 | -8.615850e-47 |
| Msa0736860 | Msa1305340 | 0.819134 | 1.361846e-52 | -8.615850e-47 |
| Msa0736860 | Msa1329700 | 0.822883 | 1.865917e-53 | -8.615850e-47 |
| Msa0736860 | Msa1411020 | 0.805804 | 1.118432e-49 | -8.615850e-47 |
| Msa0736860 | Msa1420140 | 0.804814 | 1.803153e-49 | -8.615850e-47 |
| Msa0736860 | Msa1424290 | 0.801785 | 7.642551e-49 | -8.615850e-47 |
| Msa0736860 | Msa1425100 | 0.805143 | 1.539362e-49 | -8.615850e-47 |
| Msa0736860 | Msa1434350 | 0.803154 | 3.991113e-49 | -8.615850e-47 |
| Msa0736860 | Msa1439320 | 0.810856 | 9.362421e-51 | -8.615850e-47 |
| Msa0736860 | Msa1451620 | -0.831444 | 1.663450e-55 | -8.615850e-47 |
| Msa0736860 | Msa1453560 | 0.808521 | 2.973672e-50 | -8.615850e-47 |
| Msa0736860 | Msa1454860 | 0.809221 | 2.106216e-50 | -8.615850e-47 |
| Msa0736860 | Msa1457670 | -0.808019 | 3.803104e-50 | -8.615850e-47 |
| Msa0122590 | Msa0736860 | 0.824685 | 7.060619e-54 | -8.615850e-47 |
| Msa0157100 | Msa0736860 | 0.813711 | 2.228523e-51 | -8.615850e-47 |
| Msa0157310 | Msa0736860 | 0.809395 | 1.932986e-50 | -8.615850e-47 |
| Msa0166870 | Msa0736860 | 0.810077 | 1.378674e-50 | -8.615850e-47 |
| Msa0199800 | Msa0736860 | -0.826013 | 3.423434e-54 | -8.615850e-47 |
| Msa0205510 | Msa0736860 | 0.807975 | 3.887560e-50 | -8.615850e-47 |
| Msa0220580 | Msa0736860 | 0.807905 | 4.022753e-50 | -8.615850e-47 |
| Msa0223740 | Msa0736860 | 0.804725 | 1.881637e-49 | -8.615850e-47 |
| Msa0233610 | Msa0736860 | 0.813290 | 2.758140e-51 | -8.615850e-47 |
| Msa0379640 | Msa0736860 | 0.842841 | 2.021102e-58 | -8.615850e-47 |
| Msa0442200 | Msa0736860 | 0.806610 | 7.565906e-50 | -8.615850e-47 |
| Msa0453890 | Msa0736860 | 0.802972 | 4.353601e-49 | -8.615850e-47 |
| Msa0464900 | Msa0736860 | 0.823076 | 1.682452e-53 | -8.615850e-47 |
| Msa0475490 | Msa0736860 | 0.813834 | 2.093785e-51 | -8.615850e-47 |
| Msa0477130 | Msa0736860 | -0.837768 | 4.277692e-57 | -8.615850e-47 |
| Msa0242430 | Msa0736860 | 0.802453 | 5.571178e-49 | -8.615850e-47 |
| Msa0258760 | Msa0736860 | 0.804042 | 2.611917e-49 | -8.615850e-47 |
| Msa0266690 | Msa0736860 | 0.819178 | 1.331141e-52 | -8.615850e-47 |
| Msa0266720 | Msa0736860 | 0.803680 | 3.104982e-49 | -8.615850e-47 |
| Msa0269450 | Msa0736860 | 0.825060 | 5.758936e-54 | -8.615850e-47 |
| Msa0287410 | Msa0736860 | 0.807913 | 4.007393e-50 | -8.615850e-47 |
| Msa0288100 | Msa0736860 | 0.810444 | 1.149187e-50 | -8.615850e-47 |
| Msa0296160 | Msa0736860 | 0.812967 | 3.248116e-51 | -8.615850e-47 |
| Msa0315290 | Msa0736860 | 0.810111 | 1.355610e-50 | -8.615850e-47 |
| Msa0334570 | Msa0736860 | 0.809771 | 1.604488e-50 | -8.615850e-47 |
| Msa0336250 | Msa0736860 | 0.806920 | 6.507305e-50 | -8.615850e-47 |
| Msa0351810 | Msa0736860 | 0.809202 | 2.126390e-50 | -8.615850e-47 |
| Msa0484780 | Msa0736860 | 0.817448 | 3.280170e-52 | -8.615850e-47 |
| Msa0493630 | Msa0736860 | 0.818289 | 2.118421e-52 | -8.615850e-47 |
| Msa0512900 | Msa0736860 | 0.810196 | 1.300171e-50 | -8.615850e-47 |
| Msa0523460 | Msa0736860 | 0.801726 | 7.860170e-49 | -8.615850e-47 |
| Msa0536220 | Msa0736860 | 0.812763 | 3.599502e-51 | -8.615850e-47 |
| Msa0578970 | Msa0736860 | 0.821686 | 3.538757e-53 | -8.615850e-47 |
| Msa0585230 | Msa0736860 | 0.809946 | 1.471193e-50 | -8.615850e-47 |
| Msa0599580 | Msa0736860 | 0.820157 | 7.956166e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736860 | MtrunA17_Chr5g0434561 | 100.000 | 137 | 0 | 0 | 1 | 137 | 48 | 184 | 3.21e-99 | 282 |
| Msa0736860 | MtrunA17_Chr5g0401071 | 81.481 | 135 | 25 | 0 | 1 | 135 | 48 | 182 | 3.26e-80 | 234 |
| Msa0736860 | MtrunA17_Chr4g0012371 | 76.642 | 137 | 32 | 0 | 1 | 137 | 29 | 165 | 5.96e-77 | 225 |
| Msa0736860 | MtrunA17_Chr4g0072861 | 36.719 | 128 | 81 | 0 | 2 | 129 | 46 | 173 | 1.65e-25 | 95.1 |
| Msa0736860 | MtrunA17_Chr5g0401761 | 35.156 | 128 | 83 | 0 | 2 | 129 | 46 | 173 | 5.10e-25 | 94.0 |
| Msa0736860 | MtrunA17_Chr1g0194261 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 5.67e-25 | 94.0 |
| Msa0736860 | MtrunA17_Chr7g0270301 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 5.79e-25 | 94.0 |
| Msa0736860 | MtrunA17_Chr5g0413451 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 6.24e-25 | 94.0 |
| Msa0736860 | MtrunA17_Chr5g0413441 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 6.24e-25 | 94.0 |
| Msa0736860 | MtrunA17_Chr6g0450081 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 6.73e-25 | 93.6 |
| Msa0736860 | MtrunA17_Chr2g0287721 | 34.351 | 131 | 86 | 0 | 1 | 131 | 52 | 182 | 7.03e-24 | 91.7 |
| Msa0736860 | MtrunA17_Chr1g0188111 | 39.623 | 106 | 64 | 0 | 3 | 108 | 47 | 152 | 1.05e-23 | 90.5 |
| Msa0736860 | MtrunA17_Chr4g0039591 | 36.449 | 107 | 68 | 0 | 2 | 108 | 46 | 152 | 1.46e-22 | 88.2 |
| Msa0736860 | MtrunA17_Chr5g0395631 | 33.645 | 107 | 71 | 0 | 2 | 108 | 46 | 152 | 4.66e-21 | 84.0 |
| Msa0736860 | MtrunA17_Chr8g0373271 | 32.061 | 131 | 86 | 2 | 3 | 131 | 46 | 175 | 9.98e-20 | 80.5 |
| Msa0736860 | MtrunA17_Chr4g0068171 | 39.216 | 102 | 62 | 0 | 3 | 104 | 50 | 151 | 3.21e-19 | 79.3 |
| Msa0736860 | MtrunA17_Chr5g0395641 | 35.780 | 109 | 68 | 1 | 2 | 108 | 46 | 154 | 3.74e-19 | 79.0 |
| Msa0736860 | MtrunA17_Chr7g0271761 | 39.216 | 102 | 62 | 0 | 3 | 104 | 50 | 151 | 1.68e-18 | 77.4 |
| Msa0736860 | MtrunA17_Chr2g0294701 | 38.235 | 102 | 63 | 0 | 3 | 104 | 50 | 151 | 5.83e-18 | 75.9 |
| Msa0736860 | MtrunA17_Chr4g0055651 | 38.532 | 109 | 57 | 4 | 2 | 101 | 38 | 145 | 2.54e-12 | 61.2 |
| Msa0736860 | MtrunA17_Chr7g0250531 | 34.351 | 131 | 68 | 6 | 2 | 123 | 38 | 159 | 1.49e-11 | 59.3 |
| Msa0736860 | MtrunA17_Chr2g0276931 | 31.298 | 131 | 72 | 5 | 2 | 123 | 39 | 160 | 6.50e-11 | 57.4 |
| Msa0736860 | MtrunA17_Chr8g0335471 | 33.588 | 131 | 69 | 6 | 2 | 123 | 38 | 159 | 7.35e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736860 | AT5G37680.2 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 2.16e-94 | 268 |
| Msa0736860 | AT5G37680.1 | 92.647 | 136 | 10 | 0 | 1 | 136 | 48 | 183 | 4.34e-94 | 270 |
| Msa0736860 | AT3G49870.2 | 78.102 | 137 | 30 | 0 | 1 | 137 | 29 | 165 | 6.55e-79 | 230 |
| Msa0736860 | AT3G49870.1 | 78.102 | 137 | 30 | 0 | 1 | 137 | 48 | 184 | 8.96e-79 | 231 |
| Msa0736860 | AT5G67560.1 | 77.372 | 137 | 31 | 0 | 1 | 137 | 48 | 184 | 3.27e-78 | 229 |
| Msa0736860 | AT3G49860.1 | 67.883 | 137 | 44 | 0 | 1 | 137 | 40 | 176 | 7.14e-67 | 200 |
| Msa0736860 | AT1G10630.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.08e-25 | 94.0 |
| Msa0736860 | AT1G10630.2 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.08e-25 | 94.0 |
| Msa0736860 | AT3G62290.3 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.53e-25 | 94.0 |
| Msa0736860 | AT3G62290.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.53e-25 | 94.0 |
| Msa0736860 | AT3G62290.2 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.53e-25 | 94.0 |
| Msa0736860 | AT2G47170.2 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.62e-25 | 94.0 |
| Msa0736860 | AT2G47170.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.62e-25 | 94.0 |
| Msa0736860 | AT2G47170.3 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.62e-25 | 94.0 |
| Msa0736860 | AT5G14670.2 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.62e-25 | 94.0 |
| Msa0736860 | AT5G14670.3 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 8.62e-25 | 94.0 |
| Msa0736860 | AT1G23490.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.2 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.7 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.4 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.3 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.6 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT1G70490.5 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 9.10e-25 | 93.6 |
| Msa0736860 | AT5G14670.1 | 34.375 | 128 | 84 | 0 | 2 | 129 | 46 | 173 | 1.10e-24 | 93.6 |
| Msa0736860 | AT2G24765.1 | 32.353 | 136 | 92 | 0 | 2 | 137 | 46 | 181 | 1.45e-23 | 90.5 |
| Msa0736860 | AT5G52210.1 | 35.385 | 130 | 84 | 0 | 1 | 130 | 52 | 181 | 1.49e-23 | 91.3 |
| Msa0736860 | AT5G52210.2 | 35.385 | 130 | 84 | 0 | 1 | 130 | 52 | 181 | 1.49e-23 | 91.3 |
| Msa0736860 | AT3G22950.1 | 38.679 | 106 | 65 | 0 | 3 | 108 | 47 | 152 | 1.35e-22 | 88.2 |
| Msa0736860 | AT3G22950.2 | 38.679 | 106 | 65 | 0 | 3 | 108 | 47 | 152 | 1.35e-22 | 88.2 |
| Msa0736860 | AT2G15310.1 | 32.500 | 120 | 78 | 1 | 2 | 121 | 46 | 162 | 2.53e-22 | 88.2 |
| Msa0736860 | AT5G17060.2 | 35.514 | 107 | 69 | 0 | 2 | 108 | 46 | 152 | 5.74e-22 | 86.7 |
| Msa0736860 | AT5G17060.1 | 35.514 | 107 | 69 | 0 | 2 | 108 | 46 | 152 | 5.74e-22 | 86.7 |
| Msa0736860 | AT3G03120.1 | 34.579 | 107 | 70 | 0 | 2 | 108 | 46 | 152 | 3.54e-21 | 84.7 |
| Msa0736860 | AT3G62560.1 | 39.216 | 102 | 62 | 0 | 3 | 104 | 50 | 151 | 2.64e-18 | 77.4 |
| Msa0736860 | AT2G24765.2 | 37.805 | 82 | 51 | 0 | 2 | 83 | 46 | 127 | 3.99e-18 | 75.5 |
| Msa0736860 | AT2G18390.1 | 32.061 | 131 | 86 | 2 | 3 | 131 | 46 | 175 | 5.32e-18 | 76.3 |
| Msa0736860 | AT4G02080.1 | 38.235 | 102 | 63 | 0 | 3 | 104 | 50 | 151 | 5.49e-18 | 76.6 |
| Msa0736860 | AT3G03120.2 | 35.714 | 84 | 54 | 0 | 2 | 85 | 46 | 129 | 1.05e-17 | 74.3 |
| Msa0736860 | AT1G56330.1 | 37.255 | 102 | 64 | 0 | 3 | 104 | 50 | 151 | 5.65e-17 | 73.9 |
| Msa0736860 | AT1G09180.1 | 38.235 | 102 | 63 | 0 | 3 | 104 | 50 | 151 | 1.21e-15 | 70.5 |
| Msa0736860 | AT1G02130.1 | 32.824 | 131 | 70 | 5 | 2 | 123 | 38 | 159 | 2.17e-11 | 59.3 |
| Msa0736860 | AT1G02440.1 | 26.761 | 142 | 95 | 4 | 2 | 134 | 47 | 188 | 3.49e-11 | 58.5 |
| Msa0736860 | AT3G11730.1 | 32.061 | 131 | 71 | 5 | 2 | 123 | 38 | 159 | 5.06e-11 | 58.2 |
| Msa0736860 | AT1G43890.3 | 33.333 | 138 | 74 | 8 | 3 | 130 | 43 | 172 | 6.28e-11 | 58.2 |
| Msa0736860 | AT1G43890.1 | 33.333 | 138 | 74 | 8 | 3 | 130 | 43 | 172 | 6.28e-11 | 58.2 |
| Msa0736860 | AT1G43890.2 | 33.333 | 138 | 74 | 8 | 3 | 130 | 43 | 172 | 6.28e-11 | 58.2 |
Find 57 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAATTCGCTTCGAGTTAT+TGG | 0.124309 | 5_1:+53502498 | None:intergenic |
| AACAAATTGCTTCGTTGATT+TGG | 0.213779 | 5_1:-53501808 | Msa0736860:three_prime_UTR |
| CTTGATATTGTACCAAGTTT+TGG | 0.243962 | 5_1:-53501985 | Msa0736860:three_prime_UTR |
| GGGATTCCTTTGCTTGTTCT+TGG | 0.246105 | 5_1:-53502447 | Msa0736860:CDS |
| ACAATAAAGCTTTGGGATCT+TGG | 0.278062 | 5_1:-53505480 | Msa0736860:CDS |
| AAGCAATTTGTTTAAATTGT+TGG | 0.310341 | 5_1:+53501819 | None:intergenic |
| TTCTTCCTATTCTCAACAAA+TGG | 0.313436 | 5_1:-53506189 | Msa0736860:five_prime_UTR |
| ATGGAAGATTTGACCAAGTT+TGG | 0.317834 | 5_1:+53502033 | None:intergenic |
| TCTGGGATTCTCTTCTCAAT+TGG | 0.329088 | 5_1:-53506163 | Msa0736860:five_prime_UTR |
| TTGACCCACAACTAAAATTA+AGG | 0.339003 | 5_1:+53502077 | None:intergenic |
| ATTCTCAACAAATGGGTCTC+TGG | 0.360022 | 5_1:-53506181 | Msa0736860:five_prime_UTR |
| GAAATGTCACAATAAAGCTT+TGG | 0.389200 | 5_1:-53505488 | Msa0736860:CDS |
| CTGACAAAGCCTTCCTTGAA+TGG | 0.389916 | 5_1:-53502468 | Msa0736860:CDS |
| ACATTCCACAAATCATTCAT+TGG | 0.391472 | 5_1:-53506230 | Msa0736860:five_prime_UTR |
| AGCGACCAATGAATGATTTG+TGG | 0.409384 | 5_1:+53506225 | None:intergenic |
| CATTCAAGGAAGGCTTTGTC+AGG | 0.415950 | 5_1:+53502469 | None:intergenic |
| TTGATCTACCAATGCTTGCT+TGG | 0.418148 | 5_1:+53502395 | None:intergenic |
| AAATGTCACAATAAAGCTTT+GGG | 0.418458 | 5_1:-53505487 | Msa0736860:CDS |
| CTCTTCTCAATTGGCTCCGC+AGG | 0.421148 | 5_1:-53506154 | Msa0736860:intron |
| GTTGAGAATAGGAAGAAAGA+AGG | 0.434689 | 5_1:+53506195 | None:intergenic |
| CTGTGTACAGTAACCAAACT+TGG | 0.443307 | 5_1:-53502046 | Msa0736860:three_prime_UTR |
| TGACAAAGCCTTCCTTGAAT+GGG | 0.453079 | 5_1:-53502467 | Msa0736860:CDS |
| GAATGATTTGTGGAATGTTA+AGG | 0.461935 | 5_1:+53506235 | None:intergenic |
| TTCTCAACAAATGGGTCTCT+GGG | 0.469026 | 5_1:-53506180 | Msa0736860:five_prime_UTR |
| TCTTCCTATTCTCAACAAAT+GGG | 0.470674 | 5_1:-53506188 | Msa0736860:five_prime_UTR |
| GAGACCCATTTGTTGAGAAT+AGG | 0.470753 | 5_1:+53506184 | None:intergenic |
| AATTGCTTCGTTGATTTGGA+AGG | 0.481442 | 5_1:-53501804 | None:intergenic |
| AACAGAAACCATCCAAAACT+TGG | 0.482714 | 5_1:+53501973 | None:intergenic |
| CCTAAGACAAGAATTGGAAA+GGG | 0.490397 | 5_1:-53506394 | None:intergenic |
| CTTGTAGGTCTTCAGAATGC+TGG | 0.494726 | 5_1:-53505814 | Msa0736860:intron |
| TTGTGGAATGTTAAGGAAGG+AGG | 0.497050 | 5_1:+53506242 | None:intergenic |
| TTGCTACATGATTTCATGCA+AGG | 0.505231 | 5_1:-53502202 | Msa0736860:CDS |
| AAGCAAAGGAATCCCATTCA+AGG | 0.513568 | 5_1:+53502455 | None:intergenic |
| AGCTCTTTCCAAGCAAGCAT+TGG | 0.513878 | 5_1:-53502403 | Msa0736860:CDS |
| TCCTAAGACAAGAATTGGAA+AGG | 0.529732 | 5_1:-53506395 | None:intergenic |
| ACATAGATGTGGTCATCGAC+TGG | 0.530688 | 5_1:-53502170 | Msa0736860:CDS |
| TTTGGGATCTTGGTGGTCAA+CGG | 0.548867 | 5_1:-53505470 | Msa0736860:CDS |
| AGTAAGATGTTGATACGATA+CGG | 0.558403 | 5_1:+53506282 | None:intergenic |
| ATAAAGCTTTGGGATCTTGG+TGG | 0.559424 | 5_1:-53505477 | Msa0736860:CDS |
| AATATGCGAAAAGTGACAAA+GGG | 0.561008 | 5_1:-53505510 | Msa0736860:CDS |
| TTGTTTCCAAGAACAAGCAA+AGG | 0.570676 | 5_1:+53502441 | None:intergenic |
| GTCTATGCATTACACTGGAA+AGG | 0.572286 | 5_1:+53502099 | None:intergenic |
| GTATTATTGTGATCTAAATG+TGG | 0.574237 | 5_1:-53501903 | Msa0736860:three_prime_UTR |
| TTAAGGTCTATGCATTACAC+TGG | 0.574461 | 5_1:+53502094 | None:intergenic |
| GTTTACTCAAGAACATTGCA+TGG | 0.579251 | 5_1:+53502014 | None:intergenic |
| ATGTGGGAGCGCTACTGTCG+CGG | 0.588919 | 5_1:-53505435 | Msa0736860:CDS |
| CAATATGCGAAAAGTGACAA+AGG | 0.599692 | 5_1:-53505511 | Msa0736860:CDS |
| GATTTGTGGAATGTTAAGGA+AGG | 0.602237 | 5_1:+53506239 | None:intergenic |
| GGGATCTTGGTGGTCAACGG+AGG | 0.604641 | 5_1:-53505467 | Msa0736860:CDS |
| AAAGGAATCCCATTCAAGGA+AGG | 0.619227 | 5_1:+53502459 | None:intergenic |
| CTAAGACAAGAATTGGAAAG+GGG | 0.625303 | 5_1:-53506393 | None:intergenic |
| ACGGAGGTTTCGAACAATGT+GGG | 0.644507 | 5_1:-53505451 | Msa0736860:CDS |
| GTAGATTCACACACAAAACA+AGG | 0.649203 | 5_1:-53506360 | Msa0736860:five_prime_UTR |
| GGATTCTGTAAACATAGATG+TGG | 0.658596 | 5_1:-53502181 | Msa0736860:CDS |
| AACGGAGGTTTCGAACAATG+TGG | 0.660702 | 5_1:-53505452 | Msa0736860:CDS |
| TAAGACAAGAATTGGAAAGG+GGG | 0.664668 | 5_1:-53506392 | None:intergenic |
| TGAGTCAATTAAAGACAGAG+AGG | 0.706022 | 5_1:-53502229 | Msa0736860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAGAATTTAAATGTT+AGG | - | chr5_1:53503038-53503057 | Msa0736860:intron | 10.0% |
| !! | TTCATTTGTTTAAAAATATT+TGG | - | chr5_1:53506263-53506282 | Msa0736860:five_prime_UTR | 10.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+TGG | - | chr5_1:53503379-53503398 | Msa0736860:intron | 100.0% |
| !! | AAAGAAATAAGAATAAAGAA+AGG | + | chr5_1:53502073-53502092 | None:intergenic | 15.0% |
| !!! | TAATTTTAACTCATTATTAC+TGG | - | chr5_1:53502451-53502470 | Msa0736860:CDS | 15.0% |
| !! | AAATTTGAATTCAGAATTTA+AGG | - | chr5_1:53502599-53502618 | Msa0736860:intron | 15.0% |
| !! | ATAAGAAAAAGAAAATACTA+AGG | - | chr5_1:53503006-53503025 | Msa0736860:intron | 15.0% |
| !! | AGTAATTATAGATGATTATT+AGG | - | chr5_1:53503410-53503429 | Msa0736860:intron | 15.0% |
| !!! | TTTTATGAATAAATAGAGAA+AGG | + | chr5_1:53505482-53505501 | None:intergenic | 15.0% |
| !! | ATCATATGATATATAGTAAC+TGG | + | chr5_1:53502142-53502161 | None:intergenic | 20.0% |
| !! | TTACTCTAATACTAATTTAG+AGG | + | chr5_1:53502224-53502243 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTAAACAAGAGA+TGG | - | chr5_1:53502343-53502362 | Msa0736860:intron | 20.0% |
| !! | TTTATTATAAACCCTATAGT+TGG | - | chr5_1:53503322-53503341 | Msa0736860:intron | 20.0% |
| !! | TAAAGATAAAGTTACCTTAT+TGG | + | chr5_1:53504457-53504476 | None:intergenic | 20.0% |
| !!! | TAAAGTTTCATTTTTCAATG+AGG | - | chr5_1:53504707-53504726 | Msa0736860:intron | 20.0% |
| !!! | ATCTTGATAATAAAAAACAG+TGG | + | chr5_1:53505204-53505223 | None:intergenic | 20.0% |
| !! | TTTATTATCAAGATGTAGAT+TGG | - | chr5_1:53505210-53505229 | Msa0736860:intron | 20.0% |
| !! | AACATAGCATAGAAATATAA+AGG | - | chr5_1:53505260-53505279 | Msa0736860:intron | 20.0% |
| !! | ACAGAATTATAAGAAAACAA+AGG | - | chr5_1:53505355-53505374 | Msa0736860:intron | 20.0% |
| !! | GATAGTTATTAAATGGTTAT+GGG | + | chr5_1:53505439-53505458 | None:intergenic | 20.0% |
| !!! | ACAATAATGATGATGATTTT+CGG | + | chr5_1:53505844-53505863 | None:intergenic | 20.0% |
| !!! | AAGCAATTTGTTTAAATTGT+TGG | + | chr5_1:53506372-53506391 | None:intergenic | 20.0% |
| ! | AAGAATAAAGAAAGGAAAGT+GGG | + | chr5_1:53502065-53502084 | None:intergenic | 25.0% |
| ! | TAAGAATAAAGAAAGGAAAG+TGG | + | chr5_1:53502066-53502085 | None:intergenic | 25.0% |
| ! | ATGATATATAGTAACTGGAA+TGG | + | chr5_1:53502137-53502156 | None:intergenic | 25.0% |
| ! | AATTTAGAGGTTTAACATCA+AGG | + | chr5_1:53502211-53502230 | None:intergenic | 25.0% |
| ! | ATTAGAGTAAAGATCCAATT+TGG | - | chr5_1:53502234-53502253 | Msa0736860:CDS | 25.0% |
| ! | AAAATTGCGAATAACCAAAT+TGG | + | chr5_1:53502251-53502270 | None:intergenic | 25.0% |
| ! | CAAATTCACAATCATTACTT+AGG | + | chr5_1:53502310-53502329 | None:intergenic | 25.0% |
| ! | AAAGTAAAGATACTTACAGT+TGG | + | chr5_1:53502573-53502592 | None:intergenic | 25.0% |
| !!! | GAATTTTGCTATTGAACTTT+AGG | - | chr5_1:53502647-53502666 | Msa0736860:intron | 25.0% |
| ! | AAATGTCACAATAAAGCTTT+GGG | - | chr5_1:53502701-53502720 | Msa0736860:intron | 25.0% |
| !!! | TTCCTTTGTCATTTTTTTGA+AGG | - | chr5_1:53502853-53502872 | Msa0736860:intron | 25.0% |
| ! | AACCTTCAAAAAAATGACAA+AGG | + | chr5_1:53502858-53502877 | None:intergenic | 25.0% |
| !!! | TAGTTGTTTTATGTACAGTA+GGG | - | chr5_1:53503082-53503101 | Msa0736860:intron | 25.0% |
| ! | CAGCAATGATTGAATTAATA+TGG | - | chr5_1:53503133-53503152 | Msa0736860:intron | 25.0% |
| !!! | ATTAATATGGTGTTGTGATA+AGG | - | chr5_1:53503146-53503165 | Msa0736860:intron | 25.0% |
| ! | AAAAGGGCTATTAAGTAAAT+TGG | + | chr5_1:53503460-53503479 | None:intergenic | 25.0% |
| ! | TACTTGACATTCTTAGAATT+TGG | + | chr5_1:53503561-53503580 | None:intergenic | 25.0% |
| !! | AAATTCTAAGAATGTCAAGT+AGG | - | chr5_1:53503560-53503579 | Msa0736860:intron | 25.0% |
| !! | AATTCTAAGAATGTCAAGTA+GGG | - | chr5_1:53503561-53503580 | Msa0736860:intron | 25.0% |
| ! | AAAGCTAACAATTCTTCAAA+GGG | + | chr5_1:53504018-53504037 | None:intergenic | 25.0% |
| ! | AAAAGCTAACAATTCTTCAA+AGG | + | chr5_1:53504019-53504038 | None:intergenic | 25.0% |
| !!! | TATTGTTGTTAAGGTAGTTT+TGG | + | chr5_1:53504100-53504119 | None:intergenic | 25.0% |
| !! | TTCGGTTAGTCAAATATAAT+TGG | - | chr5_1:53504353-53504372 | Msa0736860:intron | 25.0% |
| !! | TCGGTTAGTCAAATATAATT+GGG | - | chr5_1:53504354-53504373 | Msa0736860:intron | 25.0% |
| ! | AATATAATTGGGTCAAAACT+TGG | - | chr5_1:53504365-53504384 | Msa0736860:intron | 25.0% |
| ! | TAAGGTAACTTTATCTTTAG+TGG | - | chr5_1:53504458-53504477 | Msa0736860:intron | 25.0% |
| ! | TCAACAGTTTGTCTATATAT+TGG | + | chr5_1:53504609-53504628 | None:intergenic | 25.0% |
| !!! | CTGATACTCTTTTTTTTGAA+CGG | - | chr5_1:53504782-53504801 | Msa0736860:intron | 25.0% |
| ! | TGGTTATAAAAACAAGTATC+AGG | + | chr5_1:53505184-53505203 | None:intergenic | 25.0% |
| ! | CAAAATTGTTCAATAGAAGT+CGG | + | chr5_1:53505292-53505311 | None:intergenic | 25.0% |
| ! | TCTTGAATTTCTTGAAGAAT+AGG | + | chr5_1:53505400-53505419 | None:intergenic | 25.0% |
| ! | GGATAGTTATTAAATGGTTA+TGG | + | chr5_1:53505440-53505459 | None:intergenic | 25.0% |
| ! | TGAATAAATAGAGAAAGGAA+AGG | + | chr5_1:53505477-53505496 | None:intergenic | 25.0% |
| ! | TCTTATCAGAGAACAATATA+AGG | + | chr5_1:53505520-53505539 | None:intergenic | 25.0% |
| !!! | ATAGACCTTAATTTTAGTTG+TGG | - | chr5_1:53506106-53506125 | Msa0736860:intron | 25.0% |
| !!! | TAGACCTTAATTTTAGTTGT+GGG | - | chr5_1:53506107-53506126 | Msa0736860:intron | 25.0% |
| ! | GTATTATTGTGATCTAAATG+TGG | - | chr5_1:53506285-53506304 | Msa0736860:five_prime_UTR | 25.0% |
| AGTAAGATGTTGATACGATA+CGG | + | chr5_1:53501909-53501928 | None:intergenic | 30.0% | |
| ! | GAATGATTTGTGGAATGTTA+AGG | + | chr5_1:53501956-53501975 | None:intergenic | 30.0% |
| ACATTCCACAAATCATTCAT+TGG | - | chr5_1:53501958-53501977 | Msa0736860:three_prime_UTR | 30.0% | |
| TTCTTCCTATTCTCAACAAA+TGG | - | chr5_1:53501999-53502018 | Msa0736860:three_prime_UTR | 30.0% | |
| TCTTCCTATTCTCAACAAAT+GGG | - | chr5_1:53502000-53502019 | Msa0736860:three_prime_UTR | 30.0% | |
| ! | GATTGTGAATTTGTGTGTTT+TGG | - | chr5_1:53502317-53502336 | Msa0736860:intron | 30.0% |
| !!! | TTTGTTTTGTTTGACAGACA+GGG | - | chr5_1:53502526-53502545 | Msa0736860:CDS | 30.0% |
| !! | TTTGCTATTGAACTTTAGGT+TGG | - | chr5_1:53502651-53502670 | Msa0736860:intron | 30.0% |
| ! | TTGCTATTGAACTTTAGGTT+GGG | - | chr5_1:53502652-53502671 | Msa0736860:intron | 30.0% |
| AATATGCGAAAAGTGACAAA+GGG | - | chr5_1:53502678-53502697 | Msa0736860:intron | 30.0% | |
| GAAATGTCACAATAAAGCTT+TGG | - | chr5_1:53502700-53502719 | Msa0736860:intron | 30.0% | |
| !!! | CATTTTTTTGAAGGTTGTGT+TGG | - | chr5_1:53502862-53502881 | Msa0736860:intron | 30.0% |
| !! | CTAGTTGTTTTATGTACAGT+AGG | - | chr5_1:53503081-53503100 | Msa0736860:intron | 30.0% |
| ACATTCTTAGAATTTGGACT+AGG | + | chr5_1:53503555-53503574 | None:intergenic | 30.0% | |
| AGATTGAAGAAAAACTGACT+TGG | - | chr5_1:53503938-53503957 | Msa0736860:intron | 30.0% | |
| ! | GATTGAAGAAAAACTGACTT+GGG | - | chr5_1:53503939-53503958 | Msa0736860:intron | 30.0% |
| TAGACTCTTATAGAACAGTA+TGG | - | chr5_1:53503973-53503992 | Msa0736860:intron | 30.0% | |
| AGACTCTTATAGAACAGTAT+GGG | - | chr5_1:53503974-53503993 | Msa0736860:intron | 30.0% | |
| ! | TATCTCACGTATTGTTGTTA+AGG | + | chr5_1:53504109-53504128 | None:intergenic | 30.0% |
| ! | TGAACCTTTCACTTTAAAGA+TGG | + | chr5_1:53504151-53504170 | None:intergenic | 30.0% |
| AGTTCATCCCAAAATGATTT+CGG | - | chr5_1:53504335-53504354 | Msa0736860:intron | 30.0% | |
| ! | TGACTAACCGAAATCATTTT+GGG | + | chr5_1:53504345-53504364 | None:intergenic | 30.0% |
| ! | TTGACTAACCGAAATCATTT+TGG | + | chr5_1:53504346-53504365 | None:intergenic | 30.0% |
| AACTTAGAATGTAGAGCTAA+AGG | - | chr5_1:53504544-53504563 | Msa0736860:intron | 30.0% | |
| ACTTAGAATGTAGAGCTAAA+GGG | - | chr5_1:53504545-53504564 | Msa0736860:intron | 30.0% | |
| !! | TTCATTTTTCAATGAGGAAG+AGG | - | chr5_1:53504713-53504732 | Msa0736860:intron | 30.0% |
| CCTTAATGTTTGAAAGAATG+AGG | + | chr5_1:53504753-53504772 | None:intergenic | 30.0% | |
| CCTCATTCTTTCAAACATTA+AGG | - | chr5_1:53504750-53504769 | Msa0736860:intron | 30.0% | |
| !! | CGTTCAAAAAAAAGAGTATC+AGG | + | chr5_1:53504784-53504803 | None:intergenic | 30.0% |
| TATCAGGAAGTGGTAAAATA+AGG | + | chr5_1:53505168-53505187 | None:intergenic | 30.0% | |
| TAAAAACAAGTATCAGGAAG+TGG | + | chr5_1:53505178-53505197 | None:intergenic | 30.0% | |
| ! | CGACTTCTATTGAACAATTT+TGG | - | chr5_1:53505290-53505309 | Msa0736860:intron | 30.0% |
| !!! | TTGAACAATTTTGGTTACTG+AGG | - | chr5_1:53505299-53505318 | Msa0736860:intron | 30.0% |
| TTCAAGAAATTCAAGAGTCT+TGG | - | chr5_1:53505404-53505423 | Msa0736860:intron | 30.0% | |
| AGTTATTAAATGGTTATGGG+AGG | + | chr5_1:53505436-53505455 | None:intergenic | 30.0% | |
| ! | GTGATGGGATAGTTATTAAA+TGG | + | chr5_1:53505446-53505465 | None:intergenic | 30.0% |
| TTAACACATGCTTCATATTG+TGG | - | chr5_1:53505544-53505563 | Msa0736860:intron | 30.0% | |
| ! | GTTTGTTCTTTCGAGTAATT+AGG | - | chr5_1:53505574-53505593 | Msa0736860:intron | 30.0% |
| TAATTAGGAGTTGCATTTCT+TGG | - | chr5_1:53505589-53505608 | Msa0736860:intron | 30.0% | |
| AGTTGTGTTTGCTTTAATCA+TGG | - | chr5_1:53505621-53505640 | Msa0736860:intron | 30.0% | |
| ! | TTTAATTCGCTTCGAGTTAT+TGG | + | chr5_1:53505693-53505712 | None:intergenic | 30.0% |
| TTGACCCACAACTAAAATTA+AGG | + | chr5_1:53506114-53506133 | None:intergenic | 30.0% | |
| ! | CTTGATATTGTACCAAGTTT+TGG | - | chr5_1:53506203-53506222 | Msa0736860:five_prime_UTR | 30.0% |
| !!! | ATATTGTACCAAGTTTTGGA+TGG | - | chr5_1:53506207-53506226 | Msa0736860:five_prime_UTR | 30.0% |
| TGGAAAAAAGATCAGTATTG+AGG | - | chr5_1:53506305-53506324 | Msa0736860:five_prime_UTR | 30.0% | |
| ! | ATTGTTGGCACATTTTCATA+TGG | + | chr5_1:53506357-53506376 | None:intergenic | 30.0% |
| ! | AACAAATTGCTTCGTTGATT+TGG | - | chr5_1:53506380-53506399 | Msa0736860:five_prime_UTR | 30.0% |
| GTAGATTCACACACAAAACA+AGG | - | chr5_1:53501828-53501847 | Msa0736860:three_prime_UTR | 35.0% | |
| TAAAAACACAGAACGAACGT+AGG | + | chr5_1:53501881-53501900 | None:intergenic | 35.0% | |
| GATTTGTGGAATGTTAAGGA+AGG | + | chr5_1:53501952-53501971 | None:intergenic | 35.0% | |
| GTTGAGAATAGGAAGAAAGA+AGG | + | chr5_1:53501996-53502015 | None:intergenic | 35.0% | |
| TGAGGTATGGTTTCATAGTT+TGG | - | chr5_1:53502490-53502509 | Msa0736860:CDS | 35.0% | |
| !!! | GTTTGTTTTGTTTGACAGAC+AGG | - | chr5_1:53502525-53502544 | Msa0736860:CDS | 35.0% |
| !!! | TTGTTTTGTTTGACAGACAG+GGG | - | chr5_1:53502527-53502546 | Msa0736860:CDS | 35.0% |
| CAATATGCGAAAAGTGACAA+AGG | - | chr5_1:53502677-53502696 | Msa0736860:intron | 35.0% | |
| !! | ACAATAAAGCTTTGGGATCT+TGG | - | chr5_1:53502708-53502727 | Msa0736860:intron | 35.0% |
| TTCTGTTAGAACCCAAAGTT+AGG | - | chr5_1:53502929-53502948 | Msa0736860:intron | 35.0% | |
| CAGAAAACACACCTAAAATG+TGG | - | chr5_1:53502964-53502983 | Msa0736860:intron | 35.0% | |
| !! | AATATGGTGTTGTGATAAGG+AGG | - | chr5_1:53503149-53503168 | Msa0736860:intron | 35.0% |
| !! | ATATGGTGTTGTGATAAGGA+GGG | - | chr5_1:53503150-53503169 | Msa0736860:intron | 35.0% |
| ! | CGTGATAATTGTTTTCTCGT+AGG | - | chr5_1:53503218-53503237 | Msa0736860:intron | 35.0% |
| AAGTTCATCTATCATATCCG+TGG | - | chr5_1:53503268-53503287 | Msa0736860:intron | 35.0% | |
| AGTTCATCTATCATATCCGT+GGG | - | chr5_1:53503269-53503288 | Msa0736860:intron | 35.0% | |
| ! | GCTATATTTCAAGTCGATGT+CGG | + | chr5_1:53503438-53503457 | None:intergenic | 35.0% |
| ! | TTAATAGCCCTTTTAAGCCT+TGG | - | chr5_1:53503466-53503485 | Msa0736860:intron | 35.0% |
| !! | TATTTCTAGTCGATACCACT+TGG | + | chr5_1:53503492-53503511 | None:intergenic | 35.0% |
| AGATTCATCCTTCTGTTGAT+AGG | - | chr5_1:53503674-53503693 | Msa0736860:intron | 35.0% | |
| ! | TGTGATTTTCTTGATACTGG+TGG | + | chr5_1:53503706-53503725 | None:intergenic | 35.0% |
| ! | CCTTGTGATTTTCTTGATAC+TGG | + | chr5_1:53503709-53503728 | None:intergenic | 35.0% |
| CCAGTATCAAGAAAATCACA+AGG | - | chr5_1:53503706-53503725 | Msa0736860:intron | 35.0% | |
| GTATCAAGAAAATCACAAGG+CGG | - | chr5_1:53503709-53503728 | Msa0736860:intron | 35.0% | |
| AAAATCACAAGGCGGTTATT+GGG | - | chr5_1:53503717-53503736 | Msa0736860:intron | 35.0% | |
| CTAACTGTTCTGTCAAACAT+AGG | + | chr5_1:53503765-53503784 | None:intergenic | 35.0% | |
| !!! | GTTCTGTCAAACGAGTTTTT+TGG | + | chr5_1:53503789-53503808 | None:intergenic | 35.0% |
| AAACACAACTGAAGAAGTCA+AGG | - | chr5_1:53503855-53503874 | Msa0736860:intron | 35.0% | |
| AATTAGCTGGCCATATATGA+AGG | - | chr5_1:53503882-53503901 | Msa0736860:intron | 35.0% | |
| ATTAGCTGGCCATATATGAA+GGG | - | chr5_1:53503883-53503902 | Msa0736860:intron | 35.0% | |
| GACTCTTATAGAACAGTATG+GGG | - | chr5_1:53503975-53503994 | Msa0736860:intron | 35.0% | |
| ACTCTTATAGAACAGTATGG+GGG | - | chr5_1:53503976-53503995 | Msa0736860:intron | 35.0% | |
| !!! | TTGTTAGCTTTTCGACTGTT+CGG | - | chr5_1:53504027-53504046 | Msa0736860:intron | 35.0% |
| GGTACTATTGAGCAATATAG+AGG | - | chr5_1:53504048-53504067 | Msa0736860:intron | 35.0% | |
| !!! | TTTTGTGTTGATTTCCTCCA+AGG | - | chr5_1:53504072-53504091 | Msa0736860:intron | 35.0% |
| !!! | TTAAGGTAGTTTTGGTACCT+TGG | + | chr5_1:53504092-53504111 | None:intergenic | 35.0% |
| TACGTGAGATATTTCATGAG+TGG | - | chr5_1:53504118-53504137 | Msa0736860:intron | 35.0% | |
| !! | TCAGCCATCTTTAAAGTGAA+AGG | - | chr5_1:53504144-53504163 | Msa0736860:intron | 35.0% |
| ! | ATCAACTGCACTCTATTTTG+AGG | + | chr5_1:53504184-53504203 | None:intergenic | 35.0% |
| TAGAGTGCAGTTGATTAGAA+TGG | - | chr5_1:53504189-53504208 | Msa0736860:intron | 35.0% | |
| GATTAGAATGGCTAAAGATG+TGG | - | chr5_1:53504201-53504220 | Msa0736860:intron | 35.0% | |
| TGGGTGATGAAGAAATTCAA+AGG | - | chr5_1:53504236-53504255 | Msa0736860:intron | 35.0% | |
| !! | AAAGGAAAAGTGTCAAGAGA+TGG | - | chr5_1:53504254-53504273 | Msa0736860:intron | 35.0% |
| AAGTGTCAAGAGATGGTTAT+TGG | - | chr5_1:53504261-53504280 | Msa0736860:intron | 35.0% | |
| AGTGTCAAGAGATGGTTATT+GGG | - | chr5_1:53504262-53504281 | Msa0736860:intron | 35.0% | |
| CTTGCTAGAACTTGAATCTA+CGG | + | chr5_1:53504394-53504413 | None:intergenic | 35.0% | |
| ACACGTGATCATACAAATTG+AGG | - | chr5_1:53504414-53504433 | Msa0736860:intron | 35.0% | |
| AAATTGAGGAGCAATTAGTG+TGG | - | chr5_1:53504428-53504447 | Msa0736860:intron | 35.0% | |
| AATTAGTGTGGCTTCCAATA+AGG | - | chr5_1:53504440-53504459 | Msa0736860:intron | 35.0% | |
| GTGGTGAATAATTCCATTCA+CGG | - | chr5_1:53504581-53504600 | Msa0736860:intron | 35.0% | |
| ACTGTTGATGTTGTTAGTGT+TGG | - | chr5_1:53504621-53504640 | Msa0736860:intron | 35.0% | |
| ! | TGTAACTTTGCTCCATTTTC+GGG | + | chr5_1:53504849-53504868 | None:intergenic | 35.0% |
| ! | CTGTAACTTTGCTCCATTTT+CGG | + | chr5_1:53504850-53504869 | None:intergenic | 35.0% |
| TTATGACTCTTGTCTTGCTT+TGG | + | chr5_1:53504966-53504985 | None:intergenic | 35.0% | |
| ATGAAAGAACCGAAACGTTA+AGG | - | chr5_1:53504992-53505011 | Msa0736860:intron | 35.0% | |
| ! | TTCCGCTAGTTTCAAGAATT+TGG | - | chr5_1:53505110-53505129 | Msa0736860:intron | 35.0% |
| ! | TCCGCTAGTTTCAAGAATTT+GGG | - | chr5_1:53505111-53505130 | Msa0736860:intron | 35.0% |
| TAGTTTCAAGAATTTGGGCA+GGG | - | chr5_1:53505116-53505135 | Msa0736860:intron | 35.0% | |
| TAATAGTTTGGGTCGAACTA+CGG | - | chr5_1:53505142-53505161 | Msa0736860:intron | 35.0% | |
| TCCTGTAGTAATCTATAGTC+TGG | + | chr5_1:53505325-53505344 | None:intergenic | 35.0% | |
| TAGAGAAAGGAAAGGAGAAA+GGG | + | chr5_1:53505469-53505488 | None:intergenic | 35.0% | |
| ATAGAGAAAGGAAAGGAGAA+AGG | + | chr5_1:53505470-53505489 | None:intergenic | 35.0% | |
| TTAATCATGGATGCAATTGC+AGG | - | chr5_1:53505634-53505653 | Msa0736860:intron | 35.0% | |
| TTGTTTCCAAGAACAAGCAA+AGG | + | chr5_1:53505750-53505769 | None:intergenic | 35.0% | |
| AACCTTTGATTGTTCGACTT+TGG | - | chr5_1:53505920-53505939 | Msa0736860:intron | 35.0% | |
| AACCAAAGTCGAACAATCAA+AGG | + | chr5_1:53505925-53505944 | None:intergenic | 35.0% | |
| TGAGTCAATTAAAGACAGAG+AGG | - | chr5_1:53505959-53505978 | Msa0736860:intron | 35.0% | |
| TTGCTACATGATTTCATGCA+AGG | - | chr5_1:53505986-53506005 | Msa0736860:intron | 35.0% | |
| GGATTCTGTAAACATAGATG+TGG | - | chr5_1:53506007-53506026 | Msa0736860:intron | 35.0% | |
| TTAAGGTCTATGCATTACAC+TGG | + | chr5_1:53506097-53506116 | None:intergenic | 35.0% | |
| ATGGAAGATTTGACCAAGTT+TGG | + | chr5_1:53506158-53506177 | None:intergenic | 35.0% | |
| GTTTACTCAAGAACATTGCA+TGG | + | chr5_1:53506177-53506196 | None:intergenic | 35.0% | |
| AACAGAAACCATCCAAAACT+TGG | + | chr5_1:53506218-53506237 | None:intergenic | 35.0% | |
| !! | GAAGGAGGAGATGTTTTGTT+TGG | + | chr5_1:53501934-53501953 | None:intergenic | 40.0% |
| TTGTGGAATGTTAAGGAAGG+AGG | + | chr5_1:53501949-53501968 | None:intergenic | 40.0% | |
| AGCGACCAATGAATGATTTG+TGG | + | chr5_1:53501966-53501985 | None:intergenic | 40.0% | |
| ! | GAGACCCATTTGTTGAGAAT+AGG | + | chr5_1:53502007-53502026 | None:intergenic | 40.0% |
| ATTCTCAACAAATGGGTCTC+TGG | - | chr5_1:53502007-53502026 | Msa0736860:three_prime_UTR | 40.0% | |
| TTCTCAACAAATGGGTCTCT+GGG | - | chr5_1:53502008-53502027 | Msa0736860:three_prime_UTR | 40.0% | |
| ! | TCTGGGATTCTCTTCTCAAT+TGG | - | chr5_1:53502025-53502044 | Msa0736860:three_prime_UTR | 40.0% |
| !!! | GGTTTTGTTGCTTGTTCTTG+AGG | - | chr5_1:53502472-53502491 | Msa0736860:CDS | 40.0% |
| ! | TGTTGCTTGTTCTTGAGGTA+TGG | - | chr5_1:53502477-53502496 | Msa0736860:CDS | 40.0% |
| !!! | TGTTTTGTTTGACAGACAGG+GGG | - | chr5_1:53502528-53502547 | Msa0736860:CDS | 40.0% |
| !! | ATAAAGCTTTGGGATCTTGG+TGG | - | chr5_1:53502711-53502730 | Msa0736860:intron | 40.0% |
| ATGATCCAGGACCTAACTTT+GGG | + | chr5_1:53502943-53502962 | None:intergenic | 40.0% | |
| ! | GAGTACACAAGCCACATTTT+AGG | + | chr5_1:53502978-53502997 | None:intergenic | 40.0% |
| ! | AAATGTGGCTTGTGTACTCT+AGG | - | chr5_1:53502979-53502998 | Msa0736860:intron | 40.0% |
| GAACTTCCCTATTACCCTTA+AGG | + | chr5_1:53503254-53503273 | None:intergenic | 40.0% | |
| CTAAAGTCGGACCAACTATA+GGG | + | chr5_1:53503336-53503355 | None:intergenic | 40.0% | |
| ACTAAAGTCGGACCAACTAT+AGG | + | chr5_1:53503337-53503356 | None:intergenic | 40.0% | |
| TCGGATTGCATGACTAAAGT+CGG | + | chr5_1:53503349-53503368 | None:intergenic | 40.0% | |
| ! | AATGTGACTGAACGAGCTTT+TGG | - | chr5_1:53503517-53503536 | Msa0736860:intron | 40.0% |
| ! | ATGTGACTGAACGAGCTTTT+GGG | - | chr5_1:53503518-53503537 | Msa0736860:intron | 40.0% |
| ATCTGTTGGAAGAATGCAAG+AGG | - | chr5_1:53503587-53503606 | Msa0736860:intron | 40.0% | |
| TCTGTTGGAAGAATGCAAGA+GGG | - | chr5_1:53503588-53503607 | Msa0736860:intron | 40.0% | |
| GCATATGTGTCACAATACTG+AGG | - | chr5_1:53503623-53503642 | Msa0736860:intron | 40.0% | |
| TCACAATACTGAGGATTGCA+GGG | - | chr5_1:53503632-53503651 | Msa0736860:intron | 40.0% | |
| GAAGGATGAATCTCTAACTG+AGG | + | chr5_1:53503667-53503686 | None:intergenic | 40.0% | |
| GAAAATCACAAGGCGGTTAT+TGG | - | chr5_1:53503716-53503735 | Msa0736860:intron | 40.0% | |
| !! | AACACATAGCATCGATCACT+AGG | - | chr5_1:53503809-53503828 | Msa0736860:intron | 40.0% |
| AAGTCAAGGTGAGAATTAGC+TGG | - | chr5_1:53503869-53503888 | Msa0736860:intron | 40.0% | |
| GTTGTTCCTCCCTTCATATA+TGG | + | chr5_1:53503895-53503914 | None:intergenic | 40.0% | |
| TTATAGAACAGTATGGGGGA+TGG | - | chr5_1:53503980-53503999 | Msa0736860:intron | 40.0% | |
| TATAGAACAGTATGGGGGAT+GGG | - | chr5_1:53503981-53504000 | Msa0736860:intron | 40.0% | |
| TAGAATGGCTAAAGATGTGG+AGG | - | chr5_1:53504204-53504223 | Msa0736860:intron | 40.0% | |
| AGATGTGGAGGAGGATTTAT+TGG | - | chr5_1:53504216-53504235 | Msa0736860:intron | 40.0% | |
| GATGTGGAGGAGGATTTATT+GGG | - | chr5_1:53504217-53504236 | Msa0736860:intron | 40.0% | |
| AGATGGTTATTGGGAAACAG+TGG | - | chr5_1:53504271-53504290 | Msa0736860:intron | 40.0% | |
| TTATTGGGAAACAGTGGTTG+TGG | - | chr5_1:53504277-53504296 | Msa0736860:intron | 40.0% | |
| GATGAACTGAACCTTAGGTT+AGG | + | chr5_1:53504323-53504342 | None:intergenic | 40.0% | |
| ! | TTTGGGATGAACTGAACCTT+AGG | + | chr5_1:53504328-53504347 | None:intergenic | 40.0% |
| TATCTTTAGTGGCGTCAACA+AGG | - | chr5_1:53504469-53504488 | Msa0736860:intron | 40.0% | |
| CGTCAACAAGGAAATGAGAA+GGG | - | chr5_1:53504481-53504500 | Msa0736860:intron | 40.0% | |
| GTCAACAAGGAAATGAGAAG+GGG | - | chr5_1:53504482-53504501 | Msa0736860:intron | 40.0% | |
| TCAACAAGGAAATGAGAAGG+GGG | - | chr5_1:53504483-53504502 | Msa0736860:intron | 40.0% | |
| AAAGGGTTGTGATTCAAGTG+TGG | - | chr5_1:53504562-53504581 | Msa0736860:intron | 40.0% | |
| !! | CTATATATTGGTGCCGTGAA+TGG | + | chr5_1:53504597-53504616 | None:intergenic | 40.0% |
| ! | GTTGATGTTGTTAGTGTTGG+AGG | - | chr5_1:53504624-53504643 | Msa0736860:intron | 40.0% |
| TTCAATGAGGAAGAGGTGAT+TGG | - | chr5_1:53504720-53504739 | Msa0736860:intron | 40.0% | |
| TCAATGAGGAAGAGGTGATT+GGG | - | chr5_1:53504721-53504740 | Msa0736860:intron | 40.0% | |
| GGTTCATCTTGTGCTCAATT+TGG | + | chr5_1:53504828-53504847 | None:intergenic | 40.0% | |
| !!! | TGCTTTGGTCTTGGTGTTTT+GGG | + | chr5_1:53504951-53504970 | None:intergenic | 40.0% |
| !!! | TTGCTTTGGTCTTGGTGTTT+TGG | + | chr5_1:53504952-53504971 | None:intergenic | 40.0% |
| AGACAAAGGCCTTAACGTTT+CGG | + | chr5_1:53505004-53505023 | None:intergenic | 40.0% | |
| ATTCTTGAAACTAGCGGAAG+TGG | + | chr5_1:53505109-53505128 | None:intergenic | 40.0% | |
| GCCCAAATTCTTGAAACTAG+CGG | + | chr5_1:53505115-53505134 | None:intergenic | 40.0% | |
| CTAGTTTCAAGAATTTGGGC+AGG | - | chr5_1:53505115-53505134 | Msa0736860:intron | 40.0% | |
| GCCAGACTATAGATTACTAC+AGG | - | chr5_1:53505321-53505340 | Msa0736860:intron | 40.0% | |
| AGAGAAAGGAAAGGAGAAAG+GGG | + | chr5_1:53505468-53505487 | None:intergenic | 40.0% | |
| TGACAAAGCCTTCCTTGAAT+GGG | - | chr5_1:53505721-53505740 | Msa0736860:intron | 40.0% | |
| AAAGGAATCCCATTCAAGGA+AGG | + | chr5_1:53505732-53505751 | None:intergenic | 40.0% | |
| AAGCAAAGGAATCCCATTCA+AGG | + | chr5_1:53505736-53505755 | None:intergenic | 40.0% | |
| TTGATCTACCAATGCTTGCT+TGG | + | chr5_1:53505796-53505815 | None:intergenic | 40.0% | |
| ! | TCGACTTTGGTTGATTTCAG+AGG | - | chr5_1:53505933-53505952 | Msa0736860:intron | 40.0% |
| GTCTATGCATTACACTGGAA+AGG | + | chr5_1:53506092-53506111 | None:intergenic | 40.0% | |
| CTGTGTACAGTAACCAAACT+TGG | - | chr5_1:53506142-53506161 | Msa0736860:intron | 40.0% | |
| !! | AGGAAAGTGGGTTTTACCTG+CGG | + | chr5_1:53502053-53502072 | None:intergenic | 45.0% |
| CTTGTAGGTCTTCAGAATGC+TGG | - | chr5_1:53502374-53502393 | Msa0736860:intron | 45.0% | |
| ! | TTTGGGATCTTGGTGGTCAA+CGG | - | chr5_1:53502718-53502737 | Msa0736860:intron | 45.0% |
| AACGGAGGTTTCGAACAATG+TGG | - | chr5_1:53502736-53502755 | Msa0736860:intron | 45.0% | |
| ACGGAGGTTTCGAACAATGT+GGG | - | chr5_1:53502737-53502756 | Msa0736860:intron | 45.0% | |
| TAGAACCCAAAGTTAGGTCC+TGG | - | chr5_1:53502935-53502954 | Msa0736860:intron | 45.0% | |
| CATGATCCAGGACCTAACTT+TGG | + | chr5_1:53502944-53502963 | None:intergenic | 45.0% | |
| ! | GTGTGTTTTCTGCATGATCC+AGG | + | chr5_1:53502956-53502975 | None:intergenic | 45.0% |
| ! | GGAGGGCTTGTGTAAGTTTT+TGG | - | chr5_1:53503167-53503186 | Msa0736860:intron | 45.0% |
| !! | TCCTGGCCTTAAGGGTAATA+GGG | - | chr5_1:53503245-53503264 | Msa0736860:intron | 45.0% |
| CATCTATCATATCCGTGGGT+TGG | - | chr5_1:53503273-53503292 | Msa0736860:intron | 45.0% | |
| ! | ACAAAGAGTACACCAACCCA+CGG | + | chr5_1:53503288-53503307 | None:intergenic | 45.0% |
| GACTTTAGTCATGCAATCCG+AGG | - | chr5_1:53503348-53503367 | Msa0736860:intron | 45.0% | |
| CACTTGGCCAAGGCTTAAAA+GGG | + | chr5_1:53503476-53503495 | None:intergenic | 45.0% | |
| ! | TGTGACTGAACGAGCTTTTG+GGG | - | chr5_1:53503519-53503538 | Msa0736860:intron | 45.0% |
| ! | GTCAAGTAGGGTTGATCTGT+TGG | - | chr5_1:53503573-53503592 | Msa0736860:intron | 45.0% |
| AGAATGCAAGAGGGCAAACA+TGG | - | chr5_1:53503597-53503616 | Msa0736860:intron | 45.0% | |
| GTCACAATACTGAGGATTGC+AGG | - | chr5_1:53503631-53503650 | Msa0736860:intron | 45.0% | |
| GGATGAGACCTATCAACAGA+AGG | + | chr5_1:53503685-53503704 | None:intergenic | 45.0% | |
| TGAAGGGAGGAACAACTCAT+TGG | - | chr5_1:53503899-53503918 | Msa0736860:intron | 45.0% | |
| !!! | AGGTAGTTTTGGTACCTTGG+AGG | + | chr5_1:53504089-53504108 | None:intergenic | 45.0% |
| AATGGCTAAAGATGTGGAGG+AGG | - | chr5_1:53504207-53504226 | Msa0736860:intron | 45.0% | |
| TAGGTTAGGCCGAAAACAAC+AGG | + | chr5_1:53504309-53504328 | None:intergenic | 45.0% | |
| !! | GTTGTTTTCGGCCTAACCTA+AGG | - | chr5_1:53504309-53504328 | Msa0736860:intron | 45.0% |
| GCGTCAACAAGGAAATGAGA+AGG | - | chr5_1:53504480-53504499 | Msa0736860:intron | 45.0% | |
| GCACAAGATGAACCCGAAAA+TGG | - | chr5_1:53504834-53504853 | Msa0736860:intron | 45.0% | |
| AGAACAAAACACCCAGCCAA+AGG | - | chr5_1:53504876-53504895 | Msa0736860:intron | 45.0% | |
| !!! | GTCTTGGTGTTTTGGGATCT+TGG | + | chr5_1:53504944-53504963 | None:intergenic | 45.0% |
| CTCTTGTCTTGCTTTGGTCT+TGG | + | chr5_1:53504960-53504979 | None:intergenic | 45.0% | |
| ! | ATCAAGATGTAGATTGGCCG+TGG | - | chr5_1:53505216-53505235 | Msa0736860:intron | 45.0% |
| CCAGTTTCTATCAGCATCCA+CGG | + | chr5_1:53505236-53505255 | None:intergenic | 45.0% | |
| ! | CATTCAAGGAAGGCTTTGTC+AGG | + | chr5_1:53505722-53505741 | None:intergenic | 45.0% |
| CTGACAAAGCCTTCCTTGAA+TGG | - | chr5_1:53505720-53505739 | Msa0736860:intron | 45.0% | |
| GGGATTCCTTTGCTTGTTCT+TGG | - | chr5_1:53505741-53505760 | Msa0736860:intron | 45.0% | |
| AGCTCTTTCCAAGCAAGCAT+TGG | - | chr5_1:53505785-53505804 | Msa0736860:intron | 45.0% | |
| ACATAGATGTGGTCATCGAC+TGG | - | chr5_1:53506018-53506037 | Msa0736860:intron | 45.0% | |
| GAGATGGAGCTGTCTCTTGT+AGG | - | chr5_1:53502359-53502378 | Msa0736860:intron | 50.0% | |
| ! | GTTTTCTCGTAGGAGAGTCC+TGG | - | chr5_1:53503228-53503247 | Msa0736860:intron | 50.0% |
| !! | TAGGAGAGTCCTGGCCTTAA+GGG | - | chr5_1:53503237-53503256 | Msa0736860:intron | 50.0% |
| !! | GTCCTGGCCTTAAGGGTAAT+AGG | - | chr5_1:53503244-53503263 | Msa0736860:intron | 50.0% |
| TCCCTATTACCCTTAAGGCC+AGG | + | chr5_1:53503249-53503268 | None:intergenic | 50.0% | |
| !! | GTGGGTTGGTGTACTCTTTG+TGG | - | chr5_1:53503287-53503306 | Msa0736860:intron | 50.0% |
| TAGTCATGCAATCCGAGGAG+AGG | - | chr5_1:53503353-53503372 | Msa0736860:intron | 50.0% | |
| CCACTTGGCCAAGGCTTAAA+AGG | + | chr5_1:53503477-53503496 | None:intergenic | 50.0% | |
| ! | CCTTTTAAGCCTTGGCCAAG+TGG | - | chr5_1:53503474-53503493 | Msa0736860:intron | 50.0% |
| TAGTCGATACCACTTGGCCA+AGG | + | chr5_1:53503486-53503505 | None:intergenic | 50.0% | |
| AGCTGGCCATATATGAAGGG+AGG | - | chr5_1:53503886-53503905 | Msa0736860:intron | 50.0% | |
| TTGGGAAACAGTGGTTGTGG+AGG | - | chr5_1:53504280-53504299 | Msa0736860:intron | 50.0% | |
| !!! | TGGAGGCAGCCTGTTGTTTT+CGG | - | chr5_1:53504297-53504316 | Msa0736860:intron | 50.0% |
| CAAAGAAGCCATAGCGTCAC+AGG | + | chr5_1:53505037-53505056 | None:intergenic | 50.0% | |
| CTGTGACGCTATGGCTTCTT+TGG | - | chr5_1:53505035-53505054 | Msa0736860:intron | 50.0% | |
| CTAGCGGAAGTGGTCAAAGA+AGG | + | chr5_1:53505099-53505118 | None:intergenic | 50.0% | |
| TGGGCAGGGTCGTAATAGTT+TGG | - | chr5_1:53505130-53505149 | Msa0736860:intron | 50.0% | |
| GGGCAGGGTCGTAATAGTTT+GGG | - | chr5_1:53505131-53505150 | Msa0736860:intron | 50.0% | |
| CCGTGGATGCTGATAGAAAC+TGG | - | chr5_1:53505233-53505252 | Msa0736860:intron | 50.0% | |
| GGAAAGGAGAAAGGGGTGAT+GGG | + | chr5_1:53505461-53505480 | None:intergenic | 50.0% | |
| AGGAAAGGAGAAAGGGGTGA+TGG | + | chr5_1:53505462-53505481 | None:intergenic | 50.0% | |
| ! | CTCTTCTCAATTGGCTCCGC+AGG | - | chr5_1:53502034-53502053 | Msa0736860:three_prime_UTR | 55.0% |
| ACAGACAGGGGGATACAGTG+AGG | - | chr5_1:53502539-53502558 | Msa0736860:intron | 55.0% | |
| !! | GTAGGAGAGTCCTGGCCTTA+AGG | - | chr5_1:53503236-53503255 | Msa0736860:intron | 55.0% |
| TGCAATCCGAGGAGAGGAAG+CGG | - | chr5_1:53503359-53503378 | Msa0736860:intron | 55.0% | |
| TGACTCGTGACGTGAGCCTT+TGG | + | chr5_1:53504895-53504914 | None:intergenic | 55.0% | |
| AGAAGCCATAGCGTCACAGG+CGG | + | chr5_1:53505034-53505053 | None:intergenic | 55.0% | |
| AAGAAGGCGGTGTAGGTGGT+AGG | + | chr5_1:53505083-53505102 | None:intergenic | 55.0% | |
| GTCAAAGAAGGCGGTGTAGG+TGG | + | chr5_1:53505087-53505106 | None:intergenic | 55.0% | |
| GTGGTCAAAGAAGGCGGTGT+AGG | + | chr5_1:53505090-53505109 | None:intergenic | 55.0% | |
| GCGGAAGTGGTCAAAGAAGG+CGG | + | chr5_1:53505096-53505115 | None:intergenic | 55.0% | |
| ! | GGGATCTTGGTGGTCAACGG+AGG | - | chr5_1:53502721-53502740 | Msa0736860:intron | 60.0% |
| !! | ATGTGGGAGCGCTACTGTCG+CGG | - | chr5_1:53502753-53502772 | Msa0736860:intron | 60.0% |
| GCAATCCGAGGAGAGGAAGC+GGG | - | chr5_1:53503360-53503379 | Msa0736860:intron | 60.0% | |
| CAATCCGAGGAGAGGAAGCG+GGG | - | chr5_1:53503361-53503380 | Msa0736860:intron | 60.0% | |
| AATCCGAGGAGAGGAAGCGG+GGG | - | chr5_1:53503362-53503381 | Msa0736860:intron | 60.0% | |
| CGTGACGTGAGCCTTTGGCT+GGG | + | chr5_1:53504890-53504909 | None:intergenic | 60.0% | |
| TCGTGACGTGAGCCTTTGGC+TGG | + | chr5_1:53504891-53504910 | None:intergenic | 60.0% | |
| CAGGCGGAGGTCAGAGACAA+AGG | + | chr5_1:53505018-53505037 | None:intergenic | 60.0% | |
| !! | GTGTAGGTGGTAGGCGTCGA+AGG | + | chr5_1:53505074-53505093 | None:intergenic | 60.0% |
| ATCCGAGGAGAGGAAGCGGG+GGG | - | chr5_1:53503363-53503382 | Msa0736860:intron | 65.0% | |
| GACCTCCGCCTGTGACGCTA+TGG | - | chr5_1:53505026-53505045 | Msa0736860:intron | 65.0% | |
| AGCCATAGCGTCACAGGCGG+AGG | + | chr5_1:53505031-53505050 | None:intergenic | 65.0% | |
| TCCGAGGAGAGGAAGCGGGG+GGG | - | chr5_1:53503364-53503383 | Msa0736860:intron | 70.0% | |
| CCCCCCCCGCTTCCTCTCCT+CGG | + | chr5_1:53503368-53503387 | None:intergenic | 75.0% | |
| CCGAGGAGAGGAAGCGGGGG+GGG | - | chr5_1:53503365-53503384 | Msa0736860:intron | 75.0% | |
| CGAGGAGAGGAAGCGGGGGG+GGG | - | chr5_1:53503366-53503385 | Msa0736860:intron | 75.0% | |
| GAGGAGAGGAAGCGGGGGGG+GGG | - | chr5_1:53503367-53503386 | Msa0736860:intron | 75.0% | |
| AGGAGAGGAAGCGGGGGGGG+GGG | - | chr5_1:53503368-53503387 | Msa0736860:intron | 75.0% | |
| ! | GGAGAGGAAGCGGGGGGGGG+GGG | - | chr5_1:53503369-53503388 | Msa0736860:intron | 80.0% |
| ! | GAGAGGAAGCGGGGGGGGGG+GGG | - | chr5_1:53503370-53503389 | Msa0736860:intron | 80.0% |
| ! | AGAGGAAGCGGGGGGGGGGG+GGG | - | chr5_1:53503371-53503390 | Msa0736860:intron | 80.0% |
| ! | GAGGAAGCGGGGGGGGGGGG+GGG | - | chr5_1:53503372-53503391 | Msa0736860:intron | 85.0% |
| ! | AGGAAGCGGGGGGGGGGGGG+GGG | - | chr5_1:53503373-53503392 | Msa0736860:intron | 85.0% |
| ! | GGAAGCGGGGGGGGGGGGGG+GGG | - | chr5_1:53503374-53503393 | Msa0736860:intron | 90.0% |
| ! | GAAGCGGGGGGGGGGGGGGG+GGG | - | chr5_1:53503375-53503394 | Msa0736860:intron | 90.0% |
| ! | AAGCGGGGGGGGGGGGGGGG+GGG | - | chr5_1:53503376-53503395 | Msa0736860:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 53501807 | 53506403 | 53501807 | ID=Msa0736860;Name=Msa0736860 |
| chr5_1 | mRNA | 53501807 | 53506403 | 53501807 | ID=Msa0736860-mRNA-1;Parent=Msa0736860;Name=Msa0736860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=314|0.8|0.83|1|1|1|6|333|137 |
| chr5_1 | exon | 53501807 | 53502257 | 53501807 | ID=Msa0736860-mRNA-1:exon:15090;Parent=Msa0736860-mRNA-1 |
| chr5_1 | exon | 53502393 | 53502554 | 53502393 | ID=Msa0736860-mRNA-1:exon:15089;Parent=Msa0736860-mRNA-1 |
| chr5_1 | exon | 53505420 | 53505541 | 53505420 | ID=Msa0736860-mRNA-1:exon:15088;Parent=Msa0736860-mRNA-1 |
| chr5_1 | exon | 53505635 | 53505667 | 53505635 | ID=Msa0736860-mRNA-1:exon:15087;Parent=Msa0736860-mRNA-1 |
| chr5_1 | exon | 53505786 | 53505829 | 53505786 | ID=Msa0736860-mRNA-1:exon:15086;Parent=Msa0736860-mRNA-1 |
| chr5_1 | exon | 53506155 | 53506403 | 53506155 | ID=Msa0736860-mRNA-1:exon:15085;Parent=Msa0736860-mRNA-1 |
| chr5_1 | five_prime_UTR | 53506155 | 53506403 | 53506155 | ID=Msa0736860-mRNA-1:five_prime_utr;Parent=Msa0736860-mRNA-1 |
| chr5_1 | five_prime_UTR | 53505786 | 53505829 | 53505786 | ID=Msa0736860-mRNA-1:five_prime_utr;Parent=Msa0736860-mRNA-1 |
| chr5_1 | five_prime_UTR | 53505647 | 53505667 | 53505647 | ID=Msa0736860-mRNA-1:five_prime_utr;Parent=Msa0736860-mRNA-1 |
| chr5_1 | CDS | 53505635 | 53505646 | 53505635 | ID=Msa0736860-mRNA-1:cds;Parent=Msa0736860-mRNA-1 |
| chr5_1 | CDS | 53505420 | 53505541 | 53505420 | ID=Msa0736860-mRNA-1:cds;Parent=Msa0736860-mRNA-1 |
| chr5_1 | CDS | 53502393 | 53502554 | 53502393 | ID=Msa0736860-mRNA-1:cds;Parent=Msa0736860-mRNA-1 |
| chr5_1 | CDS | 53502140 | 53502257 | 53502140 | ID=Msa0736860-mRNA-1:cds;Parent=Msa0736860-mRNA-1 |
| chr5_1 | three_prime_UTR | 53501807 | 53502139 | 53501807 | ID=Msa0736860-mRNA-1:three_prime_utr;Parent=Msa0736860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
