AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0750540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750540 MtrunA17_Chr5g0395801 99.136 463 4 0 1 463 1 463 0.0 953
Msa0750540 MtrunA17_Chr1g0147211 24.064 374 222 10 64 383 16 381 2.93e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0750540 AT5G62030.1 71.205 448 114 6 10 450 6 445 0.0 641
Msa0750540 AT3G59630.1 24.057 424 255 12 55 432 9 411 6.60e-24 104
Msa0750540 AT3G59630.2 24.057 424 255 12 55 432 9 411 6.60e-24 104

Find 119 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTAAGGATTTAGGGTTTA+TGG 0.120386 5_2:+3983244 Msa0750540:CDS
GGGACTATTCAGTTTGCTTC+TGG 0.141078 5_2:+3983287 Msa0750540:CDS
AAGTTGAATTCTAAGGATTT+AGG 0.180160 5_2:+3983236 Msa0750540:CDS
ACAAGGGAATCCTAAGATTT+TGG 0.190611 5_2:+3983658 Msa0750540:CDS
GCTGAGATTCTTATTCATTA+TGG 0.202025 5_2:+3983116 Msa0750540:CDS
GAAATTAGGGTTTAGGGTTT+TGG 0.208843 5_2:+3983337 Msa0750540:CDS
GGAGAGATTGGAAATGAAAA+TGG 0.217434 5_2:+3983679 Msa0750540:CDS
TTCAGTTTGCTTCTGGGATT+AGG 0.232646 5_2:+3983294 Msa0750540:CDS
AACCCTAATTTCTCCAATTC+AGG 0.233092 5_2:-3983326 None:intergenic
AAGCCTGAATTGGAGAAATT+AGG 0.233864 5_2:+3983323 Msa0750540:CDS
ATTTAGGGTTTATGGGTAAA+AGG 0.253235 5_2:+3983252 Msa0750540:CDS
TCCAATCTCTCCAAAATCTT+AGG 0.253400 5_2:-3983668 None:intergenic
AATTGGAGAAATTAGGGTTT+AGG 0.261421 5_2:+3983330 Msa0750540:CDS
GCCAAGGCGACTGAAGATTT+TGG 0.283970 5_2:+3983989 Msa0750540:CDS
TCAGTTTGCTTCTGGGATTA+GGG 0.286217 5_2:+3983295 Msa0750540:CDS
TCCTAGACTCTCTATTGATT+GGG 0.286257 5_2:+3983805 Msa0750540:CDS
ATTGGAGAAATTAGGGTTTA+GGG 0.295088 5_2:+3983331 Msa0750540:CDS
TCAAACAAAGAGATTCTATA+AGG 0.295399 5_2:-3983749 None:intergenic
AGTTGAATTCTAAGGATTTA+GGG 0.301959 5_2:+3983237 Msa0750540:CDS
TACTGTTAAGTTGAATTCTA+AGG 0.302039 5_2:+3983229 Msa0750540:CDS
GATAGCGAATCCGGGGATTA+AGG 0.306937 5_2:+3983496 Msa0750540:CDS
AGCCTGAATTGGAGAAATTA+GGG 0.313853 5_2:+3983324 Msa0750540:CDS
GGACTATTCAGTTTGCTTCT+GGG 0.318873 5_2:+3983288 Msa0750540:CDS
GAGTACATGAGAAGACCTTC+AGG 0.320308 5_2:-3982978 None:intergenic
TCTAAGGATTTAGGGTTTAT+GGG 0.324406 5_2:+3983245 Msa0750540:CDS
GTCCTAGACTCTCTATTGAT+TGG 0.343341 5_2:+3983804 Msa0750540:CDS
GGTAAAAGGGTTATTCTTGC+TGG 0.344947 5_2:+3983266 Msa0750540:CDS
TGAGGATTGAATCTGGGATT+TGG 0.359458 5_2:-3982839 None:intergenic
AAGCGAAGGAGGCGAGGAAT+TGG 0.363100 5_2:+3983609 Msa0750540:CDS
CAAGGTTGTGAAGATGTTAC+AGG 0.372583 5_2:+3983923 Msa0750540:CDS
AGCGAAGGAGGCGAGGAATT+GGG 0.382540 5_2:+3983610 Msa0750540:CDS
GAGAGATTGGAAATGAAAAT+GGG 0.385615 5_2:+3983680 Msa0750540:CDS
ACTTCGAAAGAGTAGTTTGA+TGG 0.388536 5_2:-3982897 None:intergenic
GATTTCTCTGCTATTGCTCT+TGG 0.396289 5_2:+3983092 Msa0750540:CDS
AGCGTTTATGATAGCGAATC+CGG 0.400296 5_2:+3983487 Msa0750540:CDS
CAAACAAAGAGATTCTATAA+GGG 0.414212 5_2:-3983748 None:intergenic
TCGAAGTTCACAAATGCGTT+TGG 0.417126 5_2:+3982913 Msa0750540:CDS
GGGTCGTTGAGGATTGAATC+TGG 0.417738 5_2:-3982846 None:intergenic
GTAACTCACTGTTACGTTCT+CGG 0.423153 5_2:+3983038 Msa0750540:CDS
TAGGGCTGTGAAGCCTGAAT+TGG 0.423463 5_2:+3983313 Msa0750540:CDS
GGGGAAAGAGTTGGATGATA+AGG 0.427023 5_2:+3983418 Msa0750540:CDS
TCCAACTCTTTCCCCACCTT+CGG 0.427625 5_2:-3983410 None:intergenic
CAGTCGAAGCCGTTGTCTGC+TGG 0.443942 5_2:+3983365 Msa0750540:CDS
CTCTTTGTTTGAAGATTCTG+TGG 0.444587 5_2:+3983760 Msa0750540:CDS
GGAATCTTAGTAGAATCAAT+AGG 0.450168 5_2:-3983155 None:intergenic
GCCTCAAAAGGAGTCAGAAC+TGG 0.454686 5_2:-3983845 None:intergenic
TTGAAGATTCTGTGGATGCT+TGG 0.461951 5_2:+3983768 Msa0750540:CDS
TTTAGGGTTTATGGGTAAAA+GGG 0.464356 5_2:+3983253 Msa0750540:CDS
GTTGCTCTAACGGTAGCTGC+GGG 0.466214 5_2:+3983963 Msa0750540:CDS
AGAAATAGTGATGGTGTTGT+TGG 0.468978 5_2:-3982778 None:intergenic
ACCAAAATCTTCAGTCGCCT+TGG 0.476477 5_2:-3983990 None:intergenic
TGATAAGGAAGAGAGTGTTT+TGG 0.478103 5_2:+3983433 Msa0750540:CDS
AGGTTGTTCTGGAAATTCCA+TGG 0.486487 5_2:-3982748 None:intergenic
ATATGATCATGTTGGTATGA+AGG 0.487854 5_2:+3983562 Msa0750540:CDS
TGGTGTTTGTGTCGGATGGA+AGG 0.488027 5_2:+3983453 Msa0750540:CDS
TGCGTTTAGCGGCGGTGGAA+CGG 0.489236 5_2:-3982941 None:intergenic
GCGTTTATGATAGCGAATCC+GGG 0.502842 5_2:+3983488 Msa0750540:CDS
TATGATCATGTTGGTATGAA+GGG 0.506774 5_2:+3983563 Msa0750540:CDS
AGTGCTATCTCAGCCTCAAA+AGG 0.509062 5_2:-3983857 None:intergenic
CGGTAGCTGCGGGGATGCCA+AGG 0.510110 5_2:+3983973 Msa0750540:CDS
AAAACAACTTCCCCACATAA+GGG 0.512334 5_2:-3983532 None:intergenic
TTGAAGAGCTATGCGTTTAG+CGG 0.515595 5_2:-3982952 None:intergenic
GTAAAAGGGTTATTCTTGCT+GGG 0.516662 5_2:+3983267 Msa0750540:CDS
TAGGAAAATTTCAGTAACTT+CGG 0.516766 5_2:+3984093 Msa0750540:CDS
GAAATAGTGATGGTGTTGTT+GGG 0.517684 5_2:-3982777 None:intergenic
GGGTGTACTGCGCCGAAGGT+GGG 0.521160 5_2:+3983398 Msa0750540:CDS
GATATCTTCACCACCTTCGC+CGG 0.525270 5_2:+3983014 Msa0750540:CDS
TTGGAGGAATATGATCATGT+TGG 0.528489 5_2:+3983554 Msa0750540:CDS
GACTATTATGCTCAAGATGG+AGG 0.530446 5_2:+3984028 Msa0750540:CDS
CGAAAGAGTAGTTTGATGGA+AGG 0.531570 5_2:-3982893 None:intergenic
TTTAGGTATGACCCTTATGT+GGG 0.532658 5_2:+3983521 Msa0750540:CDS
GCGAAGGAGGCGAGGAATTG+GGG 0.533725 5_2:+3983611 Msa0750540:CDS
TGATGGAAGGATTGAGATTG+CGG 0.540466 5_2:-3982880 None:intergenic
TACCTAAAAGCCTTAATCCC+CGG 0.540870 5_2:-3983506 None:intergenic
GGTGTACTGCGCCGAAGGTG+GGG 0.546341 5_2:+3983399 Msa0750540:CDS
AGATTGCGGCGTTGAGAAGT+GGG 0.549039 5_2:-3982866 None:intergenic
GAGATTGCGGCGTTGAGAAG+TGG 0.551098 5_2:-3982867 None:intergenic
AAGAGCGATTGTTGCTCTAA+CGG 0.551801 5_2:+3983953 Msa0750540:CDS
GTTCTCGGTGATGTTACCTA+TGG 0.552000 5_2:+3983053 Msa0750540:CDS
TTTAGGGTGTACTGCGCCGA+AGG 0.552761 5_2:+3983394 Msa0750540:CDS
GGTCGTTGAGGATTGAATCT+GGG 0.555765 5_2:-3982845 None:intergenic
CGTTGAGAAGTGGGTCGTTG+AGG 0.563741 5_2:-3982857 None:intergenic
CCTAGACTCTCTATTGATTG+GGG 0.565888 5_2:+3983806 Msa0750540:CDS
ACTATTATGCTCAAGATGGA+GGG 0.566137 5_2:+3984029 Msa0750540:CDS
ATGCTCAAGATGGAGGGGAG+TGG 0.569680 5_2:+3984035 Msa0750540:CDS
TCTTGAGCATAATAGTCCAT+TGG 0.570183 5_2:-3984022 None:intergenic
GCAGACAACGGCTTCGACTG+CGG 0.570442 5_2:-3983362 None:intergenic
ATGGACTATTATGCTCAAGA+TGG 0.571439 5_2:+3984025 Msa0750540:CDS
TTCTTTGACAGAAATAGTGA+TGG 0.575244 5_2:-3982787 None:intergenic
TTTGAGGCTGAGATAGCACT+GGG 0.575711 5_2:+3983860 Msa0750540:CDS
CTATTATGCTCAAGATGGAG+GGG 0.577204 5_2:+3984030 Msa0750540:CDS
AAAAGCCTAGTCGTCCTGCT+AGG 0.588814 5_2:+3984074 Msa0750540:CDS
TGGGATTGATACCTGGATGG+TGG 0.589217 5_2:+3983879 Msa0750540:CDS
TAAAGGATTTGATTATACTG+TGG 0.592986 5_2:+3983706 Msa0750540:CDS
GGGATTGATACCTGGATGGT+GGG 0.594275 5_2:+3983880 Msa0750540:CDS
ATCGATACAACAAGCACCAT+AGG 0.598548 5_2:-3983069 None:intergenic
AGAGATTGGAAATGAAAATG+GGG 0.600592 5_2:+3983681 Msa0750540:CDS
ATAGCACTGGGATTGATACC+TGG 0.600649 5_2:+3983872 Msa0750540:CDS
TGTTGCTCTAACGGTAGCTG+CGG 0.603328 5_2:+3983962 Msa0750540:CDS
CCCCAATCAATAGAGAGTCT+AGG 0.603832 5_2:-3983806 None:intergenic
GCCGAAGGTGGGGAAAGAGT+TGG 0.608987 5_2:+3983409 Msa0750540:CDS
ATAGCTCTTCAATTCCCTGA+AGG 0.609428 5_2:+3982963 Msa0750540:CDS
GTGAGTTACACCGGCGAAGG+TGG 0.617454 5_2:-3983024 None:intergenic
ATGATCATGTTGGTATGAAG+GGG 0.622021 5_2:+3983564 Msa0750540:CDS
AAAACTCAGATGCAGAAACA+AGG 0.622881 5_2:+3983905 Msa0750540:CDS
ATGTTGGTATGAAGGGGTCG+AGG 0.623321 5_2:+3983570 Msa0750540:CDS
TTAGGGACTTTGGGTAGACA+AGG 0.624346 5_2:+3983641 Msa0750540:CDS
GAGATTGGAAATGAAAATGG+GGG 0.625888 5_2:+3983682 Msa0750540:CDS
AGTACATGAGAAGACCTTCA+GGG 0.626061 5_2:-3982977 None:intergenic
AAGAGCTATGCGTTTAGCGG+CGG 0.627002 5_2:-3982949 None:intergenic
ACAGTGAGTTACACCGGCGA+AGG 0.629851 5_2:-3983027 None:intergenic
AACGTAACAGTGAGTTACAC+CGG 0.640720 5_2:-3983033 None:intergenic
TAGGGACTTTGGGTAGACAA+GGG 0.641045 5_2:+3983642 Msa0750540:CDS
CGTTTATGATAGCGAATCCG+GGG 0.643038 5_2:+3983489 Msa0750540:CDS
CACTGGGATTGATACCTGGA+TGG 0.644522 5_2:+3983876 Msa0750540:CDS
AAAATCTCACCAGCAGACAA+CGG 0.661511 5_2:-3983374 None:intergenic
TTAGGTATGACCCTTATGTG+GGG 0.683162 5_2:+3983522 Msa0750540:CDS
TTGCTCTAACGGTAGCTGCG+GGG 0.685362 5_2:+3983964 Msa0750540:CDS
AGGTGGTGAAGATATCAGAG+AGG 0.733119 5_2:-3983007 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TCAACAAAAACATAAAGACA+AGG - chr5_2:3983179-3983198 None:intergenic 25.0%
!!! TACTGTTAAGTTGAATTCTA+AGG + chr5_2:3983229-3983248 Msa0750540:CDS 25.0%
!! AAGTTGAATTCTAAGGATTT+AGG + chr5_2:3983236-3983255 Msa0750540:CDS 25.0%
!! AGTTGAATTCTAAGGATTTA+GGG + chr5_2:3983237-3983256 Msa0750540:CDS 25.0%
! TAAAGGATTTGATTATACTG+TGG + chr5_2:3983706-3983725 Msa0750540:CDS 25.0%
! CAAACAAAGAGATTCTATAA+GGG - chr5_2:3983751-3983770 None:intergenic 25.0%
! TCAAACAAAGAGATTCTATA+AGG - chr5_2:3983752-3983771 None:intergenic 25.0%
! TAGGAAAATTTCAGTAACTT+CGG + chr5_2:3984093-3984112 Msa0750540:CDS 25.0%
! TCAACAAAAACATAAAGACA+AGG - chr5_2:3983179-3983198 None:intergenic 25.0%
!!! TACTGTTAAGTTGAATTCTA+AGG + chr5_2:3983229-3983248 Msa0750540:CDS 25.0%
!! AAGTTGAATTCTAAGGATTT+AGG + chr5_2:3983236-3983255 Msa0750540:CDS 25.0%
!! AGTTGAATTCTAAGGATTTA+GGG + chr5_2:3983237-3983256 Msa0750540:CDS 25.0%
! TAAAGGATTTGATTATACTG+TGG + chr5_2:3983706-3983725 Msa0750540:CDS 25.0%
! CAAACAAAGAGATTCTATAA+GGG - chr5_2:3983751-3983770 None:intergenic 25.0%
! TCAAACAAAGAGATTCTATA+AGG - chr5_2:3983752-3983771 None:intergenic 25.0%
! TAGGAAAATTTCAGTAACTT+CGG + chr5_2:3984093-3984112 Msa0750540:CDS 25.0%
TTCTTTGACAGAAATAGTGA+TGG - chr5_2:3982790-3982809 None:intergenic 30.0%
!!! TTGATGAATCGTTTTGGTTT+TGG - chr5_2:3982816-3982835 None:intergenic 30.0%
! TGGTTTTTGATGAATCGTTT+TGG - chr5_2:3982822-3982841 None:intergenic 30.0%
GCTGAGATTCTTATTCATTA+TGG + chr5_2:3983116-3983135 Msa0750540:CDS 30.0%
GGAATCTTAGTAGAATCAAT+AGG - chr5_2:3983158-3983177 None:intergenic 30.0%
! TTCTAAGGATTTAGGGTTTA+TGG + chr5_2:3983244-3983263 Msa0750540:CDS 30.0%
! TCTAAGGATTTAGGGTTTAT+GGG + chr5_2:3983245-3983264 Msa0750540:CDS 30.0%
! ATTTAGGGTTTATGGGTAAA+AGG + chr5_2:3983252-3983271 Msa0750540:CDS 30.0%
! TTTAGGGTTTATGGGTAAAA+GGG + chr5_2:3983253-3983272 Msa0750540:CDS 30.0%
AATTGGAGAAATTAGGGTTT+AGG + chr5_2:3983330-3983349 Msa0750540:CDS 30.0%
ATTGGAGAAATTAGGGTTTA+GGG + chr5_2:3983331-3983350 Msa0750540:CDS 30.0%
ATATGATCATGTTGGTATGA+AGG + chr5_2:3983562-3983581 Msa0750540:CDS 30.0%
TATGATCATGTTGGTATGAA+GGG + chr5_2:3983563-3983582 Msa0750540:CDS 30.0%
!! AAATGCAATTTTGAAAGCGA+AGG + chr5_2:3983595-3983614 Msa0750540:CDS 30.0%
GAGAGATTGGAAATGAAAAT+GGG + chr5_2:3983680-3983699 Msa0750540:CDS 30.0%
AGAGATTGGAAATGAAAATG+GGG + chr5_2:3983681-3983700 Msa0750540:CDS 30.0%
!!! ACTAGGCTTTTTCATATAAG+AGG - chr5_2:3984065-3984084 None:intergenic 30.0%
TTCTTTGACAGAAATAGTGA+TGG - chr5_2:3982790-3982809 None:intergenic 30.0%
!!! TTGATGAATCGTTTTGGTTT+TGG - chr5_2:3982816-3982835 None:intergenic 30.0%
! TGGTTTTTGATGAATCGTTT+TGG - chr5_2:3982822-3982841 None:intergenic 30.0%
GCTGAGATTCTTATTCATTA+TGG + chr5_2:3983116-3983135 Msa0750540:CDS 30.0%
GGAATCTTAGTAGAATCAAT+AGG - chr5_2:3983158-3983177 None:intergenic 30.0%
! TTCTAAGGATTTAGGGTTTA+TGG + chr5_2:3983244-3983263 Msa0750540:CDS 30.0%
! TCTAAGGATTTAGGGTTTAT+GGG + chr5_2:3983245-3983264 Msa0750540:CDS 30.0%
! ATTTAGGGTTTATGGGTAAA+AGG + chr5_2:3983252-3983271 Msa0750540:CDS 30.0%
! TTTAGGGTTTATGGGTAAAA+GGG + chr5_2:3983253-3983272 Msa0750540:CDS 30.0%
AATTGGAGAAATTAGGGTTT+AGG + chr5_2:3983330-3983349 Msa0750540:CDS 30.0%
ATTGGAGAAATTAGGGTTTA+GGG + chr5_2:3983331-3983350 Msa0750540:CDS 30.0%
ATATGATCATGTTGGTATGA+AGG + chr5_2:3983562-3983581 Msa0750540:CDS 30.0%
TATGATCATGTTGGTATGAA+GGG + chr5_2:3983563-3983582 Msa0750540:CDS 30.0%
!! AAATGCAATTTTGAAAGCGA+AGG + chr5_2:3983595-3983614 Msa0750540:CDS 30.0%
GAGAGATTGGAAATGAAAAT+GGG + chr5_2:3983680-3983699 Msa0750540:CDS 30.0%
AGAGATTGGAAATGAAAATG+GGG + chr5_2:3983681-3983700 Msa0750540:CDS 30.0%
!!! ACTAGGCTTTTTCATATAAG+AGG - chr5_2:3984065-3984084 None:intergenic 30.0%
!! GAAATAGTGATGGTGTTGTT+GGG - chr5_2:3982780-3982799 None:intergenic 35.0%
!! AGAAATAGTGATGGTGTTGT+TGG - chr5_2:3982781-3982800 None:intergenic 35.0%
ACTTCGAAAGAGTAGTTTGA+TGG - chr5_2:3982900-3982919 None:intergenic 35.0%
GTAAAAGGGTTATTCTTGCT+GGG + chr5_2:3983267-3983286 Msa0750540:CDS 35.0%
AAGCCTGAATTGGAGAAATT+AGG + chr5_2:3983323-3983342 Msa0750540:CDS 35.0%
AGCCTGAATTGGAGAAATTA+GGG + chr5_2:3983324-3983343 Msa0750540:CDS 35.0%
AACCCTAATTTCTCCAATTC+AGG - chr5_2:3983329-3983348 None:intergenic 35.0%
!! GAAATTAGGGTTTAGGGTTT+TGG + chr5_2:3983337-3983356 Msa0750540:CDS 35.0%
!!! TGATAAGGAAGAGAGTGTTT+TGG + chr5_2:3983433-3983452 Msa0750540:CDS 35.0%
!! TTTTAGGTATGACCCTTATG+TGG + chr5_2:3983520-3983539 Msa0750540:CDS 35.0%
TTTAGGTATGACCCTTATGT+GGG + chr5_2:3983521-3983540 Msa0750540:CDS 35.0%
AAAACAACTTCCCCACATAA+GGG - chr5_2:3983535-3983554 None:intergenic 35.0%
AAAAACAACTTCCCCACATA+AGG - chr5_2:3983536-3983555 None:intergenic 35.0%
!! TTATGTGGGGAAGTTGTTTT+TGG + chr5_2:3983535-3983554 Msa0750540:CDS 35.0%
TTGGAGGAATATGATCATGT+TGG + chr5_2:3983554-3983573 Msa0750540:CDS 35.0%
ATGATCATGTTGGTATGAAG+GGG + chr5_2:3983564-3983583 Msa0750540:CDS 35.0%
! ACAAGGGAATCCTAAGATTT+TGG + chr5_2:3983658-3983677 Msa0750540:CDS 35.0%
!! TCCTAAGATTTTGGAGAGAT+TGG + chr5_2:3983667-3983686 Msa0750540:CDS 35.0%
TCCAATCTCTCCAAAATCTT+AGG - chr5_2:3983671-3983690 None:intergenic 35.0%
GGAGAGATTGGAAATGAAAA+TGG + chr5_2:3983679-3983698 Msa0750540:CDS 35.0%
GAGATTGGAAATGAAAATGG+GGG + chr5_2:3983682-3983701 Msa0750540:CDS 35.0%
GAAATGAAAATGGGGGATAA+AGG + chr5_2:3983689-3983708 Msa0750540:CDS 35.0%
! CTCTTTGTTTGAAGATTCTG+TGG + chr5_2:3983760-3983779 Msa0750540:CDS 35.0%
! TCCTAGACTCTCTATTGATT+GGG + chr5_2:3983805-3983824 Msa0750540:CDS 35.0%
AAAACTCAGATGCAGAAACA+AGG + chr5_2:3983905-3983924 Msa0750540:CDS 35.0%
! TTTTGGTGGAGATTATCCAA+TGG + chr5_2:3984006-3984025 Msa0750540:CDS 35.0%
TCTTGAGCATAATAGTCCAT+TGG - chr5_2:3984025-3984044 None:intergenic 35.0%
! ATGGACTATTATGCTCAAGA+TGG + chr5_2:3984025-3984044 Msa0750540:CDS 35.0%
ACTATTATGCTCAAGATGGA+GGG + chr5_2:3984029-3984048 Msa0750540:CDS 35.0%
! GTTACTGAAATTTTCCTAGC+AGG - chr5_2:3984091-3984110 None:intergenic 35.0%
!! GAAATAGTGATGGTGTTGTT+GGG - chr5_2:3982780-3982799 None:intergenic 35.0%
!! AGAAATAGTGATGGTGTTGT+TGG - chr5_2:3982781-3982800 None:intergenic 35.0%
ACTTCGAAAGAGTAGTTTGA+TGG - chr5_2:3982900-3982919 None:intergenic 35.0%
GTAAAAGGGTTATTCTTGCT+GGG + chr5_2:3983267-3983286 Msa0750540:CDS 35.0%
AAGCCTGAATTGGAGAAATT+AGG + chr5_2:3983323-3983342 Msa0750540:CDS 35.0%
AGCCTGAATTGGAGAAATTA+GGG + chr5_2:3983324-3983343 Msa0750540:CDS 35.0%
AACCCTAATTTCTCCAATTC+AGG - chr5_2:3983329-3983348 None:intergenic 35.0%
!! GAAATTAGGGTTTAGGGTTT+TGG + chr5_2:3983337-3983356 Msa0750540:CDS 35.0%
!!! TGATAAGGAAGAGAGTGTTT+TGG + chr5_2:3983433-3983452 Msa0750540:CDS 35.0%
!! TTTTAGGTATGACCCTTATG+TGG + chr5_2:3983520-3983539 Msa0750540:CDS 35.0%
TTTAGGTATGACCCTTATGT+GGG + chr5_2:3983521-3983540 Msa0750540:CDS 35.0%
AAAACAACTTCCCCACATAA+GGG - chr5_2:3983535-3983554 None:intergenic 35.0%
AAAAACAACTTCCCCACATA+AGG - chr5_2:3983536-3983555 None:intergenic 35.0%
!! TTATGTGGGGAAGTTGTTTT+TGG + chr5_2:3983535-3983554 Msa0750540:CDS 35.0%
TTGGAGGAATATGATCATGT+TGG + chr5_2:3983554-3983573 Msa0750540:CDS 35.0%
ATGATCATGTTGGTATGAAG+GGG + chr5_2:3983564-3983583 Msa0750540:CDS 35.0%
! ACAAGGGAATCCTAAGATTT+TGG + chr5_2:3983658-3983677 Msa0750540:CDS 35.0%
!! TCCTAAGATTTTGGAGAGAT+TGG + chr5_2:3983667-3983686 Msa0750540:CDS 35.0%
TCCAATCTCTCCAAAATCTT+AGG - chr5_2:3983671-3983690 None:intergenic 35.0%
GGAGAGATTGGAAATGAAAA+TGG + chr5_2:3983679-3983698 Msa0750540:CDS 35.0%
GAGATTGGAAATGAAAATGG+GGG + chr5_2:3983682-3983701 Msa0750540:CDS 35.0%
GAAATGAAAATGGGGGATAA+AGG + chr5_2:3983689-3983708 Msa0750540:CDS 35.0%
! CTCTTTGTTTGAAGATTCTG+TGG + chr5_2:3983760-3983779 Msa0750540:CDS 35.0%
! TCCTAGACTCTCTATTGATT+GGG + chr5_2:3983805-3983824 Msa0750540:CDS 35.0%
AAAACTCAGATGCAGAAACA+AGG + chr5_2:3983905-3983924 Msa0750540:CDS 35.0%
! TTTTGGTGGAGATTATCCAA+TGG + chr5_2:3984006-3984025 Msa0750540:CDS 35.0%
TCTTGAGCATAATAGTCCAT+TGG - chr5_2:3984025-3984044 None:intergenic 35.0%
! ATGGACTATTATGCTCAAGA+TGG + chr5_2:3984025-3984044 Msa0750540:CDS 35.0%
ACTATTATGCTCAAGATGGA+GGG + chr5_2:3984029-3984048 Msa0750540:CDS 35.0%
! GTTACTGAAATTTTCCTAGC+AGG - chr5_2:3984091-3984110 None:intergenic 35.0%
!!! TTGGGTTTTTCAGGTTGTTC+TGG - chr5_2:3982762-3982781 None:intergenic 40.0%
!!! ATGGTGTTGTTGGGTTTTTC+AGG - chr5_2:3982771-3982790 None:intergenic 40.0%
! TGAGGATTGAATCTGGGATT+TGG - chr5_2:3982842-3982861 None:intergenic 40.0%
TGATGGAAGGATTGAGATTG+CGG - chr5_2:3982883-3982902 None:intergenic 40.0%
CGAAAGAGTAGTTTGATGGA+AGG - chr5_2:3982896-3982915 None:intergenic 40.0%
TCGAAGTTCACAAATGCGTT+TGG + chr5_2:3982913-3982932 Msa0750540:CDS 40.0%
TTGAAGAGCTATGCGTTTAG+CGG - chr5_2:3982955-3982974 None:intergenic 40.0%
ATAGCTCTTCAATTCCCTGA+AGG + chr5_2:3982963-3982982 Msa0750540:CDS 40.0%
AGTACATGAGAAGACCTTCA+GGG - chr5_2:3982980-3982999 None:intergenic 40.0%
AACGTAACAGTGAGTTACAC+CGG - chr5_2:3983036-3983055 None:intergenic 40.0%
GTAACTCACTGTTACGTTCT+CGG + chr5_2:3983038-3983057 Msa0750540:CDS 40.0%
ATCGATACAACAAGCACCAT+AGG - chr5_2:3983072-3983091 None:intergenic 40.0%
GATTTCTCTGCTATTGCTCT+TGG + chr5_2:3983092-3983111 Msa0750540:CDS 40.0%
GGTAAAAGGGTTATTCTTGC+TGG + chr5_2:3983266-3983285 Msa0750540:CDS 40.0%
! GGACTATTCAGTTTGCTTCT+GGG + chr5_2:3983288-3983307 Msa0750540:CDS 40.0%
!! TTCAGTTTGCTTCTGGGATT+AGG + chr5_2:3983294-3983313 Msa0750540:CDS 40.0%
!! TCAGTTTGCTTCTGGGATTA+GGG + chr5_2:3983295-3983314 Msa0750540:CDS 40.0%
AAAATCTCACCAGCAGACAA+CGG - chr5_2:3983377-3983396 None:intergenic 40.0%
! TTGTCTGCTGGTGAGATTTT+AGG + chr5_2:3983377-3983396 Msa0750540:CDS 40.0%
! TGTCTGCTGGTGAGATTTTA+GGG + chr5_2:3983378-3983397 Msa0750540:CDS 40.0%
!!! GAGTGTTTTGGTGTTTGTGT+CGG + chr5_2:3983445-3983464 Msa0750540:CDS 40.0%
! AGCGTTTATGATAGCGAATC+CGG + chr5_2:3983487-3983506 Msa0750540:CDS 40.0%
TACCTAAAAGCCTTAATCCC+CGG - chr5_2:3983509-3983528 None:intergenic 40.0%
TTAGGTATGACCCTTATGTG+GGG + chr5_2:3983522-3983541 Msa0750540:CDS 40.0%
!! TGCAATTTTGAAAGCGAAGG+AGG + chr5_2:3983598-3983617 Msa0750540:CDS 40.0%
TTGAAGATTCTGTGGATGCT+TGG + chr5_2:3983768-3983787 Msa0750540:CDS 40.0%
GTCCTAGACTCTCTATTGAT+TGG + chr5_2:3983804-3983823 Msa0750540:CDS 40.0%
! CCTAGACTCTCTATTGATTG+GGG + chr5_2:3983806-3983825 Msa0750540:CDS 40.0%
CAAGGTTGTGAAGATGTTAC+AGG + chr5_2:3983923-3983942 Msa0750540:CDS 40.0%
AAGAGCGATTGTTGCTCTAA+CGG + chr5_2:3983953-3983972 Msa0750540:CDS 40.0%
GACTATTATGCTCAAGATGG+AGG + chr5_2:3984028-3984047 Msa0750540:CDS 40.0%
CTATTATGCTCAAGATGGAG+GGG + chr5_2:3984030-3984049 Msa0750540:CDS 40.0%
!!! TTGGGTTTTTCAGGTTGTTC+TGG - chr5_2:3982762-3982781 None:intergenic 40.0%
!!! ATGGTGTTGTTGGGTTTTTC+AGG - chr5_2:3982771-3982790 None:intergenic 40.0%
! TGAGGATTGAATCTGGGATT+TGG - chr5_2:3982842-3982861 None:intergenic 40.0%
TGATGGAAGGATTGAGATTG+CGG - chr5_2:3982883-3982902 None:intergenic 40.0%
CGAAAGAGTAGTTTGATGGA+AGG - chr5_2:3982896-3982915 None:intergenic 40.0%
TCGAAGTTCACAAATGCGTT+TGG + chr5_2:3982913-3982932 Msa0750540:CDS 40.0%
TTGAAGAGCTATGCGTTTAG+CGG - chr5_2:3982955-3982974 None:intergenic 40.0%
ATAGCTCTTCAATTCCCTGA+AGG + chr5_2:3982963-3982982 Msa0750540:CDS 40.0%
AGTACATGAGAAGACCTTCA+GGG - chr5_2:3982980-3982999 None:intergenic 40.0%
AACGTAACAGTGAGTTACAC+CGG - chr5_2:3983036-3983055 None:intergenic 40.0%
GTAACTCACTGTTACGTTCT+CGG + chr5_2:3983038-3983057 Msa0750540:CDS 40.0%
ATCGATACAACAAGCACCAT+AGG - chr5_2:3983072-3983091 None:intergenic 40.0%
GATTTCTCTGCTATTGCTCT+TGG + chr5_2:3983092-3983111 Msa0750540:CDS 40.0%
GGTAAAAGGGTTATTCTTGC+TGG + chr5_2:3983266-3983285 Msa0750540:CDS 40.0%
! GGACTATTCAGTTTGCTTCT+GGG + chr5_2:3983288-3983307 Msa0750540:CDS 40.0%
!! TTCAGTTTGCTTCTGGGATT+AGG + chr5_2:3983294-3983313 Msa0750540:CDS 40.0%
!! TCAGTTTGCTTCTGGGATTA+GGG + chr5_2:3983295-3983314 Msa0750540:CDS 40.0%
AAAATCTCACCAGCAGACAA+CGG - chr5_2:3983377-3983396 None:intergenic 40.0%
! TTGTCTGCTGGTGAGATTTT+AGG + chr5_2:3983377-3983396 Msa0750540:CDS 40.0%
! TGTCTGCTGGTGAGATTTTA+GGG + chr5_2:3983378-3983397 Msa0750540:CDS 40.0%
!!! GAGTGTTTTGGTGTTTGTGT+CGG + chr5_2:3983445-3983464 Msa0750540:CDS 40.0%
! AGCGTTTATGATAGCGAATC+CGG + chr5_2:3983487-3983506 Msa0750540:CDS 40.0%
TACCTAAAAGCCTTAATCCC+CGG - chr5_2:3983509-3983528 None:intergenic 40.0%
TTAGGTATGACCCTTATGTG+GGG + chr5_2:3983522-3983541 Msa0750540:CDS 40.0%
!! TGCAATTTTGAAAGCGAAGG+AGG + chr5_2:3983598-3983617 Msa0750540:CDS 40.0%
TTGAAGATTCTGTGGATGCT+TGG + chr5_2:3983768-3983787 Msa0750540:CDS 40.0%
GTCCTAGACTCTCTATTGAT+TGG + chr5_2:3983804-3983823 Msa0750540:CDS 40.0%
! CCTAGACTCTCTATTGATTG+GGG + chr5_2:3983806-3983825 Msa0750540:CDS 40.0%
CAAGGTTGTGAAGATGTTAC+AGG + chr5_2:3983923-3983942 Msa0750540:CDS 40.0%
AAGAGCGATTGTTGCTCTAA+CGG + chr5_2:3983953-3983972 Msa0750540:CDS 40.0%
GACTATTATGCTCAAGATGG+AGG + chr5_2:3984028-3984047 Msa0750540:CDS 40.0%
CTATTATGCTCAAGATGGAG+GGG + chr5_2:3984030-3984049 Msa0750540:CDS 40.0%
GGTCGTTGAGGATTGAATCT+GGG - chr5_2:3982848-3982867 None:intergenic 45.0%
GAGTACATGAGAAGACCTTC+AGG - chr5_2:3982981-3983000 None:intergenic 45.0%
AGGTGGTGAAGATATCAGAG+AGG - chr5_2:3983010-3983029 None:intergenic 45.0%
GTTCTCGGTGATGTTACCTA+TGG + chr5_2:3983053-3983072 Msa0750540:CDS 45.0%
! GGGACTATTCAGTTTGCTTC+TGG + chr5_2:3983287-3983306 Msa0750540:CDS 45.0%
GGGGAAAGAGTTGGATGATA+AGG + chr5_2:3983418-3983437 Msa0750540:CDS 45.0%
!!! GTTTTGGTGTTTGTGTCGGA+TGG + chr5_2:3983449-3983468 Msa0750540:CDS 45.0%
! GCGTTTATGATAGCGAATCC+GGG + chr5_2:3983488-3983507 Msa0750540:CDS 45.0%
! CGTTTATGATAGCGAATCCG+GGG + chr5_2:3983489-3983508 Msa0750540:CDS 45.0%
! ATCCGGGGATTAAGGCTTTT+AGG + chr5_2:3983504-3983523 Msa0750540:CDS 45.0%
!!! TGTGGGGAAGTTGTTTTTGG+AGG + chr5_2:3983538-3983557 Msa0750540:CDS 45.0%
!!! AGGAATTGGGGCGTTGTTTT+AGG + chr5_2:3983623-3983642 Msa0750540:CDS 45.0%
!!! GGAATTGGGGCGTTGTTTTA+GGG + chr5_2:3983624-3983643 Msa0750540:CDS 45.0%
!!! GGCGTTGTTTTAGGGACTTT+GGG + chr5_2:3983632-3983651 Msa0750540:CDS 45.0%
TTAGGGACTTTGGGTAGACA+AGG + chr5_2:3983641-3983660 Msa0750540:CDS 45.0%
TAGGGACTTTGGGTAGACAA+GGG + chr5_2:3983642-3983661 Msa0750540:CDS 45.0%
CCCCAATCAATAGAGAGTCT+AGG - chr5_2:3983809-3983828 None:intergenic 45.0%
!! ACCAGTTCTGACTCCTTTTG+AGG + chr5_2:3983844-3983863 Msa0750540:CDS 45.0%
AGTGCTATCTCAGCCTCAAA+AGG - chr5_2:3983860-3983879 None:intergenic 45.0%
!!! TTTTGAGGCTGAGATAGCAC+TGG + chr5_2:3983859-3983878 Msa0750540:CDS 45.0%
! TTTGAGGCTGAGATAGCACT+GGG + chr5_2:3983860-3983879 Msa0750540:CDS 45.0%
! ATAGCACTGGGATTGATACC+TGG + chr5_2:3983872-3983891 Msa0750540:CDS 45.0%
ACCAAAATCTTCAGTCGCCT+TGG - chr5_2:3983993-3984012 None:intergenic 45.0%
! AAGGCGACTGAAGATTTTGG+TGG + chr5_2:3983992-3984011 Msa0750540:CDS 45.0%
! ATTTTCCTAGCAGGACGACT+AGG - chr5_2:3984082-3984101 None:intergenic 45.0%
GGTCGTTGAGGATTGAATCT+GGG - chr5_2:3982848-3982867 None:intergenic 45.0%
GAGTACATGAGAAGACCTTC+AGG - chr5_2:3982981-3983000 None:intergenic 45.0%
AGGTGGTGAAGATATCAGAG+AGG - chr5_2:3983010-3983029 None:intergenic 45.0%
GTTCTCGGTGATGTTACCTA+TGG + chr5_2:3983053-3983072 Msa0750540:CDS 45.0%
! GGGACTATTCAGTTTGCTTC+TGG + chr5_2:3983287-3983306 Msa0750540:CDS 45.0%
GGGGAAAGAGTTGGATGATA+AGG + chr5_2:3983418-3983437 Msa0750540:CDS 45.0%
!!! GTTTTGGTGTTTGTGTCGGA+TGG + chr5_2:3983449-3983468 Msa0750540:CDS 45.0%
! GCGTTTATGATAGCGAATCC+GGG + chr5_2:3983488-3983507 Msa0750540:CDS 45.0%
! CGTTTATGATAGCGAATCCG+GGG + chr5_2:3983489-3983508 Msa0750540:CDS 45.0%
! ATCCGGGGATTAAGGCTTTT+AGG + chr5_2:3983504-3983523 Msa0750540:CDS 45.0%
!!! TGTGGGGAAGTTGTTTTTGG+AGG + chr5_2:3983538-3983557 Msa0750540:CDS 45.0%
!!! AGGAATTGGGGCGTTGTTTT+AGG + chr5_2:3983623-3983642 Msa0750540:CDS 45.0%
!!! GGAATTGGGGCGTTGTTTTA+GGG + chr5_2:3983624-3983643 Msa0750540:CDS 45.0%
!!! GGCGTTGTTTTAGGGACTTT+GGG + chr5_2:3983632-3983651 Msa0750540:CDS 45.0%
TTAGGGACTTTGGGTAGACA+AGG + chr5_2:3983641-3983660 Msa0750540:CDS 45.0%
TAGGGACTTTGGGTAGACAA+GGG + chr5_2:3983642-3983661 Msa0750540:CDS 45.0%
CCCCAATCAATAGAGAGTCT+AGG - chr5_2:3983809-3983828 None:intergenic 45.0%
!! ACCAGTTCTGACTCCTTTTG+AGG + chr5_2:3983844-3983863 Msa0750540:CDS 45.0%
AGTGCTATCTCAGCCTCAAA+AGG - chr5_2:3983860-3983879 None:intergenic 45.0%
!!! TTTTGAGGCTGAGATAGCAC+TGG + chr5_2:3983859-3983878 Msa0750540:CDS 45.0%
! TTTGAGGCTGAGATAGCACT+GGG + chr5_2:3983860-3983879 Msa0750540:CDS 45.0%
! ATAGCACTGGGATTGATACC+TGG + chr5_2:3983872-3983891 Msa0750540:CDS 45.0%
ACCAAAATCTTCAGTCGCCT+TGG - chr5_2:3983993-3984012 None:intergenic 45.0%
! AAGGCGACTGAAGATTTTGG+TGG + chr5_2:3983992-3984011 Msa0750540:CDS 45.0%
! ATTTTCCTAGCAGGACGACT+AGG - chr5_2:3984082-3984101 None:intergenic 45.0%
GGGTCGTTGAGGATTGAATC+TGG - chr5_2:3982849-3982868 None:intergenic 50.0%
! AGATTGCGGCGTTGAGAAGT+GGG - chr5_2:3982869-3982888 None:intergenic 50.0%
AAGAGCTATGCGTTTAGCGG+CGG - chr5_2:3982952-3982971 None:intergenic 50.0%
GATATCTTCACCACCTTCGC+CGG + chr5_2:3983014-3983033 Msa0750540:CDS 50.0%
TAGGGCTGTGAAGCCTGAAT+TGG + chr5_2:3983313-3983332 Msa0750540:CDS 50.0%
TCCAACTCTTTCCCCACCTT+CGG - chr5_2:3983413-3983432 None:intergenic 50.0%
TGGTGTTTGTGTCGGATGGA+AGG + chr5_2:3983453-3983472 Msa0750540:CDS 50.0%
GATAGCGAATCCGGGGATTA+AGG + chr5_2:3983496-3983515 Msa0750540:CDS 50.0%
ATGTTGGTATGAAGGGGTCG+AGG + chr5_2:3983570-3983589 Msa0750540:CDS 50.0%
!! TTTTGAAAGCGAAGGAGGCG+AGG + chr5_2:3983603-3983622 Msa0750540:CDS 50.0%
!!! GGGCGTTGTTTTAGGGACTT+TGG + chr5_2:3983631-3983650 Msa0750540:CDS 50.0%
GCCTCAAAAGGAGTCAGAAC+TGG - chr5_2:3983848-3983867 None:intergenic 50.0%
CACTGGGATTGATACCTGGA+TGG + chr5_2:3983876-3983895 Msa0750540:CDS 50.0%
TGGGATTGATACCTGGATGG+TGG + chr5_2:3983879-3983898 Msa0750540:CDS 50.0%
GGGATTGATACCTGGATGGT+GGG + chr5_2:3983880-3983899 Msa0750540:CDS 50.0%
! TGAGTTTTCTCCCACCATCC+AGG - chr5_2:3983893-3983912 None:intergenic 50.0%
TGTTGCTCTAACGGTAGCTG+CGG + chr5_2:3983962-3983981 Msa0750540:CDS 50.0%
! GCCAAGGCGACTGAAGATTT+TGG + chr5_2:3983989-3984008 Msa0750540:CDS 50.0%
AAAAGCCTAGTCGTCCTGCT+AGG + chr5_2:3984074-3984093 Msa0750540:CDS 50.0%
GGGTCGTTGAGGATTGAATC+TGG - chr5_2:3982849-3982868 None:intergenic 50.0%
! AGATTGCGGCGTTGAGAAGT+GGG - chr5_2:3982869-3982888 None:intergenic 50.0%
AAGAGCTATGCGTTTAGCGG+CGG - chr5_2:3982952-3982971 None:intergenic 50.0%
GATATCTTCACCACCTTCGC+CGG + chr5_2:3983014-3983033 Msa0750540:CDS 50.0%
TAGGGCTGTGAAGCCTGAAT+TGG + chr5_2:3983313-3983332 Msa0750540:CDS 50.0%
TCCAACTCTTTCCCCACCTT+CGG - chr5_2:3983413-3983432 None:intergenic 50.0%
TGGTGTTTGTGTCGGATGGA+AGG + chr5_2:3983453-3983472 Msa0750540:CDS 50.0%
GATAGCGAATCCGGGGATTA+AGG + chr5_2:3983496-3983515 Msa0750540:CDS 50.0%
ATGTTGGTATGAAGGGGTCG+AGG + chr5_2:3983570-3983589 Msa0750540:CDS 50.0%
!! TTTTGAAAGCGAAGGAGGCG+AGG + chr5_2:3983603-3983622 Msa0750540:CDS 50.0%
!!! GGGCGTTGTTTTAGGGACTT+TGG + chr5_2:3983631-3983650 Msa0750540:CDS 50.0%
GCCTCAAAAGGAGTCAGAAC+TGG - chr5_2:3983848-3983867 None:intergenic 50.0%
CACTGGGATTGATACCTGGA+TGG + chr5_2:3983876-3983895 Msa0750540:CDS 50.0%
TGGGATTGATACCTGGATGG+TGG + chr5_2:3983879-3983898 Msa0750540:CDS 50.0%
GGGATTGATACCTGGATGGT+GGG + chr5_2:3983880-3983899 Msa0750540:CDS 50.0%
! TGAGTTTTCTCCCACCATCC+AGG - chr5_2:3983893-3983912 None:intergenic 50.0%
TGTTGCTCTAACGGTAGCTG+CGG + chr5_2:3983962-3983981 Msa0750540:CDS 50.0%
! GCCAAGGCGACTGAAGATTT+TGG + chr5_2:3983989-3984008 Msa0750540:CDS 50.0%
AAAAGCCTAGTCGTCCTGCT+AGG + chr5_2:3984074-3984093 Msa0750540:CDS 50.0%
CGTTGAGAAGTGGGTCGTTG+AGG - chr5_2:3982860-3982879 None:intergenic 55.0%
! GAGATTGCGGCGTTGAGAAG+TGG - chr5_2:3982870-3982889 None:intergenic 55.0%
ACAGTGAGTTACACCGGCGA+AGG - chr5_2:3983030-3983049 None:intergenic 55.0%
! TTTAGGGTGTACTGCGCCGA+AGG + chr5_2:3983394-3983413 Msa0750540:CDS 55.0%
AAGCGAAGGAGGCGAGGAAT+TGG + chr5_2:3983609-3983628 Msa0750540:CDS 55.0%
AGCGAAGGAGGCGAGGAATT+GGG + chr5_2:3983610-3983629 Msa0750540:CDS 55.0%
GTTGCTCTAACGGTAGCTGC+GGG + chr5_2:3983963-3983982 Msa0750540:CDS 55.0%
TTGCTCTAACGGTAGCTGCG+GGG + chr5_2:3983964-3983983 Msa0750540:CDS 55.0%
ATGCTCAAGATGGAGGGGAG+TGG + chr5_2:3984035-3984054 Msa0750540:CDS 55.0%
CGTTGAGAAGTGGGTCGTTG+AGG - chr5_2:3982860-3982879 None:intergenic 55.0%
! GAGATTGCGGCGTTGAGAAG+TGG - chr5_2:3982870-3982889 None:intergenic 55.0%
ACAGTGAGTTACACCGGCGA+AGG - chr5_2:3983030-3983049 None:intergenic 55.0%
! TTTAGGGTGTACTGCGCCGA+AGG + chr5_2:3983394-3983413 Msa0750540:CDS 55.0%
AAGCGAAGGAGGCGAGGAAT+TGG + chr5_2:3983609-3983628 Msa0750540:CDS 55.0%
AGCGAAGGAGGCGAGGAATT+GGG + chr5_2:3983610-3983629 Msa0750540:CDS 55.0%
GTTGCTCTAACGGTAGCTGC+GGG + chr5_2:3983963-3983982 Msa0750540:CDS 55.0%
TTGCTCTAACGGTAGCTGCG+GGG + chr5_2:3983964-3983983 Msa0750540:CDS 55.0%
ATGCTCAAGATGGAGGGGAG+TGG + chr5_2:3984035-3984054 Msa0750540:CDS 55.0%
TGCGTTTAGCGGCGGTGGAA+CGG - chr5_2:3982944-3982963 None:intergenic 60.0%
AGCTATGCGTTTAGCGGCGG+TGG - chr5_2:3982949-3982968 None:intergenic 60.0%
GTGAGTTACACCGGCGAAGG+TGG - chr5_2:3983027-3983046 None:intergenic 60.0%
GCAGACAACGGCTTCGACTG+CGG - chr5_2:3983365-3983384 None:intergenic 60.0%
CAGTCGAAGCCGTTGTCTGC+TGG + chr5_2:3983365-3983384 Msa0750540:CDS 60.0%
GCCGAAGGTGGGGAAAGAGT+TGG + chr5_2:3983409-3983428 Msa0750540:CDS 60.0%
GCGAAGGAGGCGAGGAATTG+GGG + chr5_2:3983611-3983630 Msa0750540:CDS 60.0%
TGCGTTTAGCGGCGGTGGAA+CGG - chr5_2:3982944-3982963 None:intergenic 60.0%
AGCTATGCGTTTAGCGGCGG+TGG - chr5_2:3982949-3982968 None:intergenic 60.0%
GTGAGTTACACCGGCGAAGG+TGG - chr5_2:3983027-3983046 None:intergenic 60.0%
GCAGACAACGGCTTCGACTG+CGG - chr5_2:3983365-3983384 None:intergenic 60.0%
CAGTCGAAGCCGTTGTCTGC+TGG + chr5_2:3983365-3983384 Msa0750540:CDS 60.0%
GCCGAAGGTGGGGAAAGAGT+TGG + chr5_2:3983409-3983428 Msa0750540:CDS 60.0%
GCGAAGGAGGCGAGGAATTG+GGG + chr5_2:3983611-3983630 Msa0750540:CDS 60.0%
AGGGTGTACTGCGCCGAAGG+TGG + chr5_2:3983397-3983416 Msa0750540:CDS 65.0%
GGGTGTACTGCGCCGAAGGT+GGG + chr5_2:3983398-3983417 Msa0750540:CDS 65.0%
GGTGTACTGCGCCGAAGGTG+GGG + chr5_2:3983399-3983418 Msa0750540:CDS 65.0%
AGGGTGTACTGCGCCGAAGG+TGG + chr5_2:3983397-3983416 Msa0750540:CDS 65.0%
GGGTGTACTGCGCCGAAGGT+GGG + chr5_2:3983398-3983417 Msa0750540:CDS 65.0%
GGTGTACTGCGCCGAAGGTG+GGG + chr5_2:3983399-3983418 Msa0750540:CDS 65.0%
CGGTAGCTGCGGGGATGCCA+AGG + chr5_2:3983973-3983992 Msa0750540:CDS 70.0%
CGGTAGCTGCGGGGATGCCA+AGG + chr5_2:3983973-3983992 Msa0750540:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 3982750 3984141 3982750 ID=Msa0750540;Name=Msa0750540
chr5_2 mRNA 3982750 3984141 3982750 ID=Msa0750540-mRNA-1;Parent=Msa0750540;Name=Msa0750540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|463
chr5_2 exon 3982750 3984141 3982750 ID=Msa0750540-mRNA-1:exon:1465;Parent=Msa0750540-mRNA-1
chr5_2 CDS 3982750 3984141 3982750 ID=Msa0750540-mRNA-1:cds;Parent=Msa0750540-mRNA-1
Gene Sequence

>Msa0750540

ATGGAATTTCCAGAACAACCTGAAAAACCCAACAACACCATCACTATTTCTGTCAAAGAAAAACCAAAACCAAAACGATTCATCAAAAACCAAATCCCAGATTCAATCCTCAACGACCCACTTCTCAACGCCGCAATCTCAATCCTTCCATCAAACTACTCTTTCGAAGTTCACAAATGCGTTTGGCGCGTCCGTTCCACCGCCGCTAAACGCATAGCTCTTCAATTCCCTGAAGGTCTTCTCATGTACTCTCTTATCCTCTCTGATATCTTCACCACCTTCGCCGGTGTAACTCACTGTTACGTTCTCGGTGATGTTACCTATGGTGCTTGTTGTATCGATGATTTCTCTGCTATTGCTCTTGGTGCTGAGATTCTTATTCATTATGGTCATAGTTGTTTAGTTCCTATTGATTCTACTAAGATTCCTTGTCTTTATGTTTTTGTTGATATTAAGATTGATGTTGATCATTTAGTTGATACTGTTAAGTTGAATTCTAAGGATTTAGGGTTTATGGGTAAAAGGGTTATTCTTGCTGGGACTATTCAGTTTGCTTCTGGGATTAGGGCTGTGAAGCCTGAATTGGAGAAATTAGGGTTTAGGGTTTTGGTTCCGCAGTCGAAGCCGTTGTCTGCTGGTGAGATTTTAGGGTGTACTGCGCCGAAGGTGGGGAAAGAGTTGGATGATAAGGAAGAGAGTGTTTTGGTGTTTGTGTCGGATGGAAGGTTTCATCTTGAAGCGTTTATGATAGCGAATCCGGGGATTAAGGCTTTTAGGTATGACCCTTATGTGGGGAAGTTGTTTTTGGAGGAATATGATCATGTTGGTATGAAGGGGTCGAGGAAAAATGCAATTTTGAAAGCGAAGGAGGCGAGGAATTGGGGCGTTGTTTTAGGGACTTTGGGTAGACAAGGGAATCCTAAGATTTTGGAGAGATTGGAAATGAAAATGGGGGATAAAGGATTTGATTATACTGTGGTTTTGATGTCTGAGCTAAGCCCTTATAGAATCTCTTTGTTTGAAGATTCTGTGGATGCTTGGATTCAGATTGCTTGTCCTAGACTCTCTATTGATTGGGGAGATGCTTTTGTAAAACCAGTTCTGACTCCTTTTGAGGCTGAGATAGCACTGGGATTGATACCTGGATGGTGGGAGAAAACTCAGATGCAGAAACAAGGTTGTGAAGATGTTACAGGTTGCAATAAGAGCGATTGTTGCTCTAACGGTAGCTGCGGGGATGCCAAGGCGACTGAAGATTTTGGTGGAGATTATCCAATGGACTATTATGCTCAAGATGGAGGGGAGTGGAATTCCTCTTATATGAAAAAGCCTAGTCGTCCTGCTAGGAAAATTTCAGTAACTTCGGTTGCTAACAGTGTCACTTCTCAATAG

Protein sequence

>Msa0750540

MEFPEQPEKPNNTITISVKEKPKPKRFIKNQIPDSILNDPLLNAAISILPSNYSFEVHKCVWRVRSTAAKRIALQFPEGLLMYSLILSDIFTTFAGVTHCYVLGDVTYGACCIDDFSAIALGAEILIHYGHSCLVPIDSTKIPCLYVFVDIKIDVDHLVDTVKLNSKDLGFMGKRVILAGTIQFASGIRAVKPELEKLGFRVLVPQSKPLSAGEILGCTAPKVGKELDDKEESVLVFVSDGRFHLEAFMIANPGIKAFRYDPYVGKLFLEEYDHVGMKGSRKNAILKAKEARNWGVVLGTLGRQGNPKILERLEMKMGDKGFDYTVVLMSELSPYRISLFEDSVDAWIQIACPRLSIDWGDAFVKPVLTPFEAEIALGLIPGWWEKTQMQKQGCEDVTGCNKSDCCSNGSCGDAKATEDFGGDYPMDYYAQDGGEWNSSYMKKPSRPARKISVTSVANSVTSQ*