Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744030 | KEH28468.1 | 76.190 | 105 | 11 | 1 | 20 | 124 | 1 | 91 | 5.01e-38 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744030 | A0A072UH81 | 76.190 | 105 | 11 | 1 | 20 | 124 | 1 | 91 | 2.39e-38 | 134 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0744030 | 0.810111 | 1.356173e-50 | -8.615850e-47 |
| Msa0004860 | Msa0744030 | 0.806917 | 6.516138e-50 | -8.615850e-47 |
| Msa0004920 | Msa0744030 | 0.809544 | 1.795467e-50 | -8.615850e-47 |
| Msa0007540 | Msa0744030 | 0.813200 | 2.886614e-51 | -8.615850e-47 |
| Msa0007650 | Msa0744030 | 0.804808 | 1.808194e-49 | -8.615850e-47 |
| Msa0018620 | Msa0744030 | 0.805894 | 1.070940e-49 | -8.615850e-47 |
| Msa0020930 | Msa0744030 | 0.830767 | 2.440185e-55 | -8.615850e-47 |
| Msa0040450 | Msa0744030 | 0.805758 | 1.143872e-49 | -8.615850e-47 |
| Msa0044020 | Msa0744030 | 0.821293 | 4.360487e-53 | -8.615850e-47 |
| Msa0045790 | Msa0744030 | 0.802650 | 5.071905e-49 | -8.615850e-47 |
| Msa0046160 | Msa0744030 | 0.806601 | 7.600207e-50 | -8.615850e-47 |
| Msa0068680 | Msa0744030 | 0.812949 | 3.276887e-51 | -8.615850e-47 |
| Msa0076000 | Msa0744030 | 0.814934 | 1.196234e-51 | -8.615850e-47 |
| Msa0078650 | Msa0744030 | 0.819511 | 1.117873e-52 | -8.615850e-47 |
| Msa0094120 | Msa0744030 | 0.810545 | 1.092803e-50 | -8.615850e-47 |
| Msa0617580 | Msa0744030 | 0.819871 | 9.250912e-53 | -8.615850e-47 |
| Msa0623700 | Msa0744030 | 0.823662 | 1.227849e-53 | -8.615850e-47 |
| Msa0638070 | Msa0744030 | 0.801371 | 9.294580e-49 | -8.615850e-47 |
| Msa0639430 | Msa0744030 | 0.810241 | 1.271283e-50 | -8.615850e-47 |
| Msa0641140 | Msa0744030 | 0.814260 | 1.687083e-51 | -8.615850e-47 |
| Msa0679680 | Msa0744030 | 0.802750 | 4.837402e-49 | -8.615850e-47 |
| Msa0682330 | Msa0744030 | 0.826049 | 3.357295e-54 | -8.615850e-47 |
| Msa0693380 | Msa0744030 | 0.814054 | 1.872643e-51 | -8.615850e-47 |
| Msa0703230 | Msa0744030 | 0.806087 | 9.754059e-50 | -8.615850e-47 |
| Msa0737560 | Msa0744030 | 0.823849 | 1.110125e-53 | -8.615850e-47 |
| Msa0737570 | Msa0744030 | 0.813193 | 2.897387e-51 | -8.615850e-47 |
| Msa0744000 | Msa0744030 | 0.812853 | 3.440322e-51 | -8.615850e-47 |
| Msa0744030 | Msa0744040 | 0.854816 | 9.564742e-62 | -8.615850e-47 |
| Msa0744030 | Msa0750880 | 0.803912 | 2.779151e-49 | -8.615850e-47 |
| Msa0744030 | Msa0760380 | 0.816848 | 4.476490e-52 | -8.615850e-47 |
| Msa0744030 | Msa0777990 | 0.811336 | 7.368160e-51 | -8.615850e-47 |
| Msa0744030 | Msa0795680 | 0.803691 | 3.089341e-49 | -8.615850e-47 |
| Msa0744030 | Msa0814320 | 0.814657 | 1.378081e-51 | -8.615850e-47 |
| Msa0744030 | Msa0816700 | 0.802109 | 6.555719e-49 | -8.615850e-47 |
| Msa0744030 | Msa0824660 | 0.814433 | 1.544175e-51 | -8.615850e-47 |
| Msa0744030 | Msa0825340 | 0.896660 | 2.979917e-76 | -8.615850e-47 |
| Msa0744030 | Msa0850960 | 0.812140 | 4.924254e-51 | -8.615850e-47 |
| Msa0744030 | Msa0856910 | 0.811970 | 5.362051e-51 | -8.615850e-47 |
| Msa0744030 | Msa0856920 | 0.826426 | 2.729973e-54 | -8.615850e-47 |
| Msa0744030 | Msa0863930 | 0.822757 | 1.997327e-53 | -8.615850e-47 |
| Msa0744030 | Msa0864300 | 0.822259 | 2.606682e-53 | -8.615850e-47 |
| Msa0744030 | Msa0880950 | 0.801606 | 8.318735e-49 | -8.615850e-47 |
| Msa0744030 | Msa0881020 | 0.806601 | 7.600207e-50 | -8.615850e-47 |
| Msa0744030 | Msa0906690 | 0.820423 | 6.911987e-53 | -8.615850e-47 |
| Msa0744030 | Msa0937670 | 0.805576 | 1.248727e-49 | -8.615850e-47 |
| Msa0744030 | Msa0953150 | 0.807922 | 3.988567e-50 | -8.615850e-47 |
| Msa0744030 | Msa1040890 | 0.805042 | 1.615729e-49 | -8.615850e-47 |
| Msa0744030 | Msa1041210 | 0.803204 | 3.897698e-49 | -8.615850e-47 |
| Msa0744030 | Msa1041520 | 0.827305 | 1.683525e-54 | -8.615850e-47 |
| Msa0744030 | Msa1081560 | 0.820305 | 7.356235e-53 | -8.615850e-47 |
| Msa0744030 | Msa1082500 | 0.805960 | 1.037360e-49 | -8.615850e-47 |
| Msa0744030 | Msa1083210 | 0.810544 | 1.093672e-50 | -8.615850e-47 |
| Msa0744030 | Msa1097640 | 0.800344 | 1.506438e-48 | -8.615850e-47 |
| Msa0744030 | Msa1111110 | 0.804627 | 1.972831e-49 | -8.615850e-47 |
| Msa0744030 | Msa1124310 | 0.815086 | 1.107132e-51 | -8.615850e-47 |
| Msa0744030 | Msa1127130 | 0.807957 | 3.921673e-50 | -8.615850e-47 |
| Msa0744030 | Msa1127650 | 0.822475 | 2.322903e-53 | -8.615850e-47 |
| Msa0744030 | Msa1127830 | 0.840517 | 8.291484e-58 | -8.615850e-47 |
| Msa0744030 | Msa1127890 | 0.839378 | 1.642646e-57 | -8.615850e-47 |
| Msa0744030 | Msa1139810 | 0.806931 | 6.472247e-50 | -8.615850e-47 |
| Msa0744030 | Msa1165520 | 0.818841 | 1.588396e-52 | -8.615850e-47 |
| Msa0744030 | Msa1165740 | 0.805675 | 1.190225e-49 | -8.615850e-47 |
| Msa0744030 | Msa1166410 | 0.839257 | 1.765078e-57 | -8.615850e-47 |
| Msa0744030 | Msa1187840 | 0.814839 | 1.256010e-51 | -8.615850e-47 |
| Msa0744030 | Msa1199570 | 0.803618 | 3.199337e-49 | -8.615850e-47 |
| Msa0744030 | Msa1203250 | 0.813939 | 1.985212e-51 | -8.615850e-47 |
| Msa0744030 | Msa1252190 | 0.832233 | 1.062686e-55 | -8.615850e-47 |
| Msa0744030 | Msa1254710 | 0.801129 | 1.041493e-48 | -8.615850e-47 |
| Msa0744030 | Msa1292830 | 0.837091 | 6.377156e-57 | -8.615850e-47 |
| Msa0744030 | Msa1295910 | 0.817925 | 2.560336e-52 | -8.615850e-47 |
| Msa0744030 | Msa1307950 | 0.807825 | 4.184106e-50 | -8.615850e-47 |
| Msa0744030 | Msa1311960 | 0.825955 | 3.533802e-54 | -8.615850e-47 |
| Msa0744030 | Msa1316830 | 0.801490 | 8.786016e-49 | -8.615850e-47 |
| Msa0744030 | Msa1328710 | 0.808953 | 2.403764e-50 | -8.615850e-47 |
| Msa0744030 | Msa1343070 | 0.802817 | 4.686180e-49 | -8.615850e-47 |
| Msa0744030 | Msa1351730 | 0.829807 | 4.187182e-55 | -8.615850e-47 |
| Msa0744030 | Msa1353060 | 0.805490 | 1.301719e-49 | -8.615850e-47 |
| Msa0744030 | Msa1366600 | 0.831045 | 2.084552e-55 | -8.615850e-47 |
| Msa0744030 | Msa1373330 | 0.815425 | 9.308682e-52 | -8.615850e-47 |
| Msa0744030 | Msa1397810 | 0.833109 | 6.442080e-56 | -8.615850e-47 |
| Msa0744030 | Msa1409700 | 0.807206 | 5.659664e-50 | -8.615850e-47 |
| Msa0744030 | Msa1415940 | 0.801213 | 1.000936e-48 | -8.615850e-47 |
| Msa0744030 | Msa1427060 | 0.827239 | 1.746135e-54 | -8.615850e-47 |
| Msa0744030 | Msa1435890 | 0.816432 | 5.545927e-52 | -8.615850e-47 |
| Msa0744030 | Msa1436480 | 0.812275 | 4.601413e-51 | -8.615850e-47 |
| Msa0744030 | Msa1442850 | 0.822134 | 2.787272e-53 | -8.615850e-47 |
| Msa0744030 | Msa1460020 | 0.831748 | 1.400160e-55 | -8.615850e-47 |
| Msa0744030 | Msa1466300 | 0.822249 | 2.620116e-53 | -8.615850e-47 |
| Msa0124340 | Msa0744030 | 0.803542 | 3.317667e-49 | -8.615850e-47 |
| Msa0126370 | Msa0744030 | 0.800428 | 1.448189e-48 | -8.615850e-47 |
| Msa0135420 | Msa0744030 | 0.808232 | 3.427300e-50 | -8.615850e-47 |
| Msa0142950 | Msa0744030 | 0.803372 | 3.597379e-49 | -8.615850e-47 |
| Msa0159930 | Msa0744030 | 0.809902 | 1.504292e-50 | -8.615850e-47 |
| Msa0186890 | Msa0744030 | 0.806391 | 8.414047e-50 | -8.615850e-47 |
| Msa0198530 | Msa0744030 | 0.802846 | 4.622165e-49 | -8.615850e-47 |
| Msa0205850 | Msa0744030 | 0.801631 | 8.219711e-49 | -8.615850e-47 |
| Msa0216240 | Msa0744030 | 0.806154 | 9.440144e-50 | -8.615850e-47 |
| Msa0225740 | Msa0744030 | 0.814662 | 1.374450e-51 | -8.615850e-47 |
| Msa0227400 | Msa0744030 | 0.814118 | 1.813259e-51 | -8.615850e-47 |
| Msa0366240 | Msa0744030 | 0.817239 | 3.655365e-52 | -8.615850e-47 |
| Msa0369850 | Msa0744030 | 0.824166 | 9.353489e-54 | -8.615850e-47 |
| Msa0402330 | Msa0744030 | 0.841851 | 3.697586e-58 | -8.615850e-47 |
| Msa0413450 | Msa0744030 | 0.800068 | 1.713864e-48 | -8.615850e-47 |
| Msa0414170 | Msa0744030 | 0.808170 | 3.532820e-50 | -8.615850e-47 |
| Msa0417270 | Msa0744030 | 0.803294 | 3.733794e-49 | -8.615850e-47 |
| Msa0417880 | Msa0744030 | 0.815623 | 8.410221e-52 | -8.615850e-47 |
| Msa0423900 | Msa0744030 | 0.809602 | 1.744813e-50 | -8.615850e-47 |
| Msa0424920 | Msa0744030 | 0.811351 | 7.312275e-51 | -8.615850e-47 |
| Msa0479170 | Msa0744030 | 0.813501 | 2.478793e-51 | -8.615850e-47 |
| Msa0309770 | Msa0744030 | 0.820911 | 5.340811e-53 | -8.615850e-47 |
| Msa0317730 | Msa0744030 | 0.817341 | 3.467090e-52 | -8.615850e-47 |
| Msa0355270 | Msa0744030 | 0.854816 | 9.569136e-62 | -8.615850e-47 |
| Msa0484780 | Msa0744030 | 0.804736 | 1.872098e-49 | -8.615850e-47 |
| Msa0505770 | Msa0744030 | 0.850506 | 1.625296e-60 | -8.615850e-47 |
| Msa0509610 | Msa0744030 | 0.807328 | 5.332954e-50 | -8.615850e-47 |
| Msa0516320 | Msa0744030 | 0.804815 | 1.802460e-49 | -8.615850e-47 |
| Msa0521500 | Msa0744030 | 0.810502 | 1.116556e-50 | -8.615850e-47 |
| Msa0521880 | Msa0744030 | 0.811426 | 7.042354e-51 | -8.615850e-47 |
| Msa0526890 | Msa0744030 | 0.839281 | 1.740928e-57 | -8.615850e-47 |
| Msa0541860 | Msa0744030 | 0.806697 | 7.251694e-50 | -8.615850e-47 |
| Msa0545060 | Msa0744030 | 0.839446 | 1.576839e-57 | -8.615850e-47 |
| Msa0546680 | Msa0744030 | 0.821180 | 4.630288e-53 | -8.615850e-47 |
| Msa0547360 | Msa0744030 | 0.806473 | 8.086230e-50 | -8.615850e-47 |
| Msa0557070 | Msa0744030 | 0.806909 | 6.541191e-50 | -8.615850e-47 |
| Msa0577500 | Msa0744030 | 0.801033 | 1.089884e-48 | -8.615850e-47 |
| Msa0600600 | Msa0744030 | 0.803268 | 3.780396e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744030 | MtrunA17_Chr5g0446481 | 56.250 | 112 | 30 | 3 | 3 | 95 | 269 | 380 | 1.33e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCCTCATCGTTGTCTTC+AGG | 0.242628 | 5_1:+64693669 | None:intergenic |
| TTCTTCCATGACTTCTAATT+CGG | 0.254904 | 5_1:+64693701 | None:intergenic |
| CTGTTCTCACATTTGACTTC+AGG | 0.259207 | 5_1:+64693487 | None:intergenic |
| TACCATCCAACTCCTCTTCT+CGG | 0.356543 | 5_1:+64693449 | None:intergenic |
| TGCCCTCATCGTTGTCTTCA+GGG | 0.390187 | 5_1:+64693670 | None:intergenic |
| TCTTCCATGACTTCTAATTC+GGG | 0.395461 | 5_1:+64693702 | None:intergenic |
| GGAGTTGGATGGTAAGGATA+AGG | 0.416898 | 5_1:-64693440 | Msa0744030:CDS |
| TGTTCTCACATTTGACTTCA+GGG | 0.423382 | 5_1:+64693488 | None:intergenic |
| AAGGAGAAAAGTCAAGAAGA+GGG | 0.437816 | 5_1:-64693642 | Msa0744030:CDS |
| GAAGATATTGAAGTTGAGAA+AGG | 0.451322 | 5_1:-64693385 | Msa0744030:CDS |
| TGTCAAAGTGGAGGAAGGAT+TGG | 0.460101 | 5_1:-64693595 | Msa0744030:CDS |
| GAAACCCGAATTAGAAGTCA+TGG | 0.483277 | 5_1:-64693706 | Msa0744030:CDS |
| GAAAAGCCGAGAAGAGGAGT+TGG | 0.483883 | 5_1:-64693455 | Msa0744030:CDS |
| CAACGATGAGGGCAGTGAAA+AGG | 0.510264 | 5_1:-64693661 | Msa0744030:CDS |
| CAAATGTGAGAACAGTGAAA+AGG | 0.511793 | 5_1:-64693479 | Msa0744030:CDS |
| GAGAGGAGGAAACAACCATT+AGG | 0.513456 | 5_1:-64693347 | None:intergenic |
| AGAAGAGGAGTTGGATGGTA+AGG | 0.515883 | 5_1:-64693446 | Msa0744030:CDS |
| GACGATAAGTCAAATGAAGA+TGG | 0.529347 | 5_1:-64693415 | Msa0744030:CDS |
| GGAGAAAAGTCAAGAAGAGG+GGG | 0.533848 | 5_1:-64693640 | Msa0744030:CDS |
| AGGAGAAAAGTCAAGAAGAG+GGG | 0.535131 | 5_1:-64693641 | Msa0744030:CDS |
| GAAGATGTCAAAGTGGAGGA+AGG | 0.545672 | 5_1:-64693600 | Msa0744030:CDS |
| AAAGGAGAAAAGTCAAGAAG+AGG | 0.574837 | 5_1:-64693643 | Msa0744030:CDS |
| TGCAGGAAAGGAAAGGTCGA+AGG | 0.593802 | 5_1:-64693567 | Msa0744030:CDS |
| GTCAAATGAAGATGTCAAAG+TGG | 0.615078 | 5_1:-64693607 | Msa0744030:CDS |
| AAAGGAGAAAAGCCGAGAAG+AGG | 0.615277 | 5_1:-64693461 | Msa0744030:CDS |
| ATCCCTGAAGACAACGATGA+GGG | 0.622827 | 5_1:-64693672 | Msa0744030:CDS |
| AAATGAAGATGTCAAAGTGG+AGG | 0.626631 | 5_1:-64693604 | Msa0744030:CDS |
| AGCCGAGAAGAGGAGTTGGA+TGG | 0.655744 | 5_1:-64693451 | Msa0744030:CDS |
| GCAGGAAAGGAAAGGTCGAA+GGG | 0.655802 | 5_1:-64693566 | Msa0744030:intron |
| TATCCCTGAAGACAACGATG+AGG | 0.692736 | 5_1:-64693673 | Msa0744030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAGGAATAAAAAAGTGT+GGG | - | chr5_1:64693723-64693742 | Msa0744030:CDS | 25.0% |
| TTCTTCCATGACTTCTAATT+CGG | + | chr5_1:64693394-64693413 | None:intergenic | 30.0% | |
| AAGGTGAAAAAGGAAAACAA+AGG | - | chr5_1:64693552-64693571 | Msa0744030:intron | 30.0% | |
| AAAGGAACAAAAAGAGATAG+AGG | - | chr5_1:64693570-64693589 | Msa0744030:CDS | 30.0% | |
| GAAGATATTGAAGTTGAGAA+AGG | - | chr5_1:64693707-64693726 | Msa0744030:CDS | 30.0% | |
| GAGAAAGGAATAAAAAAGTG+TGG | - | chr5_1:64693722-64693741 | Msa0744030:CDS | 30.0% | |
| TCTTCCATGACTTCTAATTC+GGG | + | chr5_1:64693393-64693412 | None:intergenic | 35.0% | |
| AAAGGAGAAAAGTCAAGAAG+AGG | - | chr5_1:64693449-64693468 | Msa0744030:CDS | 35.0% | |
| AAGGAGAAAAGTCAAGAAGA+GGG | - | chr5_1:64693450-64693469 | Msa0744030:CDS | 35.0% | |
| GTCAAATGAAGATGTCAAAG+TGG | - | chr5_1:64693485-64693504 | Msa0744030:CDS | 35.0% | |
| AAATGAAGATGTCAAAGTGG+AGG | - | chr5_1:64693488-64693507 | Msa0744030:CDS | 35.0% | |
| CAAAAAGAGATAGAGGATAG+AGG | - | chr5_1:64693577-64693596 | Msa0744030:CDS | 35.0% | |
| ! | TGTTCTCACATTTGACTTCA+GGG | + | chr5_1:64693607-64693626 | None:intergenic | 35.0% |
| CAAATGTGAGAACAGTGAAA+AGG | - | chr5_1:64693613-64693632 | Msa0744030:CDS | 35.0% | |
| GACGATAAGTCAAATGAAGA+TGG | - | chr5_1:64693677-64693696 | Msa0744030:CDS | 35.0% | |
| GAAACCCGAATTAGAAGTCA+TGG | - | chr5_1:64693386-64693405 | Msa0744030:CDS | 40.0% | |
| AGGAGAAAAGTCAAGAAGAG+GGG | - | chr5_1:64693451-64693470 | Msa0744030:CDS | 40.0% | |
| AGGAAGGATTGGAAAAATGC+AGG | - | chr5_1:64693508-64693527 | Msa0744030:intron | 40.0% | |
| GGATTGGAAAAATGCAGGAA+AGG | - | chr5_1:64693513-64693532 | Msa0744030:intron | 40.0% | |
| GGAAAAATGCAGGAAAGGAA+AGG | - | chr5_1:64693518-64693537 | Msa0744030:intron | 40.0% | |
| ! | CTGTTCTCACATTTGACTTC+AGG | + | chr5_1:64693608-64693627 | None:intergenic | 40.0% |
| ! | GGAATAAAAAAGTGTGGGAG+AGG | - | chr5_1:64693728-64693747 | Msa0744030:CDS | 40.0% |
| ! | ATAAAAAAGTGTGGGAGAGG+AGG | - | chr5_1:64693731-64693750 | Msa0744030:CDS | 40.0% |
| TATCCCTGAAGACAACGATG+AGG | - | chr5_1:64693419-64693438 | Msa0744030:CDS | 45.0% | |
| ATCCCTGAAGACAACGATGA+GGG | - | chr5_1:64693420-64693439 | Msa0744030:CDS | 45.0% | |
| GGAGAAAAGTCAAGAAGAGG+GGG | - | chr5_1:64693452-64693471 | Msa0744030:CDS | 45.0% | |
| GAAGATGTCAAAGTGGAGGA+AGG | - | chr5_1:64693492-64693511 | Msa0744030:CDS | 45.0% | |
| TGTCAAAGTGGAGGAAGGAT+TGG | - | chr5_1:64693497-64693516 | Msa0744030:CDS | 45.0% | |
| CGAAGGGTAGAAGGTGAAAA+AGG | - | chr5_1:64693542-64693561 | Msa0744030:intron | 45.0% | |
| AAAGGAGAAAAGCCGAGAAG+AGG | - | chr5_1:64693631-64693650 | Msa0744030:CDS | 45.0% | |
| TACCATCCAACTCCTCTTCT+CGG | + | chr5_1:64693646-64693665 | None:intergenic | 45.0% | |
| AGAAGAGGAGTTGGATGGTA+AGG | - | chr5_1:64693646-64693665 | Msa0744030:CDS | 45.0% | |
| GGAGTTGGATGGTAAGGATA+AGG | - | chr5_1:64693652-64693671 | Msa0744030:CDS | 45.0% | |
| TGCCCTCATCGTTGTCTTCA+GGG | + | chr5_1:64693425-64693444 | None:intergenic | 50.0% | |
| CAACGATGAGGGCAGTGAAA+AGG | - | chr5_1:64693431-64693450 | Msa0744030:CDS | 50.0% | |
| GAAAAGTCAAGAAGAGGGGG+AGG | - | chr5_1:64693455-64693474 | Msa0744030:CDS | 50.0% | |
| TGCAGGAAAGGAAAGGTCGA+AGG | - | chr5_1:64693525-64693544 | Msa0744030:intron | 50.0% | |
| GCAGGAAAGGAAAGGTCGAA+GGG | - | chr5_1:64693526-64693545 | Msa0744030:intron | 50.0% | |
| AGGAAAGGTCGAAGGGTAGA+AGG | - | chr5_1:64693533-64693552 | Msa0744030:intron | 50.0% | |
| GAAAAGCCGAGAAGAGGAGT+TGG | - | chr5_1:64693637-64693656 | Msa0744030:CDS | 50.0% | |
| CTGCCCTCATCGTTGTCTTC+AGG | + | chr5_1:64693426-64693445 | None:intergenic | 55.0% | |
| AGCCGAGAAGAGGAGTTGGA+TGG | - | chr5_1:64693641-64693660 | Msa0744030:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 64693348 | 64693766 | 64693348 | ID=Msa0744030;Name=Msa0744030 |
| chr5_1 | mRNA | 64693348 | 64693766 | 64693348 | ID=Msa0744030-mRNA-1;Parent=Msa0744030;Name=Msa0744030-mRNA-1;_AED=0.40;_eAED=0.57;_QI=0|0|0|1|0|0|2|0|124 |
| chr5_1 | exon | 64693567 | 64693766 | 64693567 | ID=Msa0744030-mRNA-1:exon:19182;Parent=Msa0744030-mRNA-1 |
| chr5_1 | exon | 64693348 | 64693522 | 64693348 | ID=Msa0744030-mRNA-1:exon:19181;Parent=Msa0744030-mRNA-1 |
| chr5_1 | CDS | 64693567 | 64693766 | 64693567 | ID=Msa0744030-mRNA-1:cds;Parent=Msa0744030-mRNA-1 |
| chr5_1 | CDS | 64693348 | 64693522 | 64693348 | ID=Msa0744030-mRNA-1:cds;Parent=Msa0744030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
