Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015480 | sp|Q9LW60|P2C44_ARATH | 43.885 | 278 | 132 | 6 | 1 | 273 | 1 | 259 | 3.14e-70 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0015480 | 0.812500 | 4.109969e-51 | -8.615850e-47 |
| Msa0007470 | Msa0015480 | 0.805991 | 1.021737e-49 | -8.615850e-47 |
| Msa0015460 | Msa0015480 | 0.949996 | 4.090380e-108 | -8.615850e-47 |
| Msa0015480 | Msa0037540 | -0.845621 | 3.621851e-59 | -8.615850e-47 |
| Msa0015480 | Msa0037590 | -0.843584 | 1.280709e-58 | -8.615850e-47 |
| Msa0015480 | Msa0054260 | 0.804204 | 2.417148e-49 | -8.615850e-47 |
| Msa0015480 | Msa0064700 | 0.853992 | 1.655244e-61 | -8.615850e-47 |
| Msa0015480 | Msa0065010 | 0.809482 | 1.851517e-50 | -8.615850e-47 |
| Msa0015480 | Msa0082680 | -0.809871 | 1.527516e-50 | -8.615850e-47 |
| Msa0015480 | Msa0091250 | -0.822370 | 2.456074e-53 | -8.615850e-47 |
| Msa0015480 | Msa0100090 | 0.828715 | 7.708336e-55 | -8.615850e-47 |
| Msa0015480 | Msa0109590 | 0.939658 | 8.774552e-100 | -8.615850e-47 |
| Msa0015480 | Msa0118540 | 0.836402 | 9.556338e-57 | -8.615850e-47 |
| Msa0015480 | Msa0129190 | -0.843229 | 1.593207e-58 | -8.615850e-47 |
| Msa0015480 | Msa0130520 | 0.808582 | 2.884983e-50 | -8.615850e-47 |
| Msa0015480 | Msa0135410 | 0.803365 | 3.608748e-49 | -8.615850e-47 |
| Msa0015480 | Msa0138020 | 0.815163 | 1.063947e-51 | -8.615850e-47 |
| Msa0015480 | Msa0155340 | 0.804703 | 1.901950e-49 | -8.615850e-47 |
| Msa0015480 | Msa0155880 | 0.920901 | 7.109574e-88 | -8.615850e-47 |
| Msa0015480 | Msa0174390 | 0.813790 | 2.141535e-51 | -8.615850e-47 |
| Msa0015480 | Msa0177700 | -0.814424 | 1.551429e-51 | -8.615850e-47 |
| Msa0015480 | Msa0178800 | 0.802831 | 4.655177e-49 | -8.615850e-47 |
| Msa0015480 | Msa0187230 | 0.808434 | 3.103132e-50 | -8.615850e-47 |
| Msa0015480 | Msa0189520 | 0.806008 | 1.013232e-49 | -8.615850e-47 |
| Msa0015480 | Msa0197660 | 0.845382 | 4.206438e-59 | -8.615850e-47 |
| Msa0015480 | Msa0229380 | 0.800736 | 1.252771e-48 | -8.615850e-47 |
| Msa0015480 | Msa0239800 | 0.850058 | 2.170336e-60 | -8.615850e-47 |
| Msa0015480 | Msa0244140 | 0.812993 | 3.205345e-51 | -8.615850e-47 |
| Msa0015480 | Msa0244190 | 0.820567 | 6.408227e-53 | -8.615850e-47 |
| Msa0015480 | Msa0245310 | 0.831022 | 2.112240e-55 | -8.615850e-47 |
| Msa0015480 | Msa0257500 | 0.817424 | 3.321270e-52 | -8.615850e-47 |
| Msa0015480 | Msa0268090 | 0.804406 | 2.193435e-49 | -8.615850e-47 |
| Msa0015480 | Msa0270170 | -0.802691 | 4.976053e-49 | -8.615850e-47 |
| Msa0015480 | Msa0271360 | 0.803940 | 2.742578e-49 | -8.615850e-47 |
| Msa0015480 | Msa0272450 | 0.800706 | 1.271010e-48 | -8.615850e-47 |
| Msa0015480 | Msa0277820 | 0.818664 | 1.742137e-52 | -8.615850e-47 |
| Msa0015480 | Msa0297810 | -0.802499 | 5.449387e-49 | -8.615850e-47 |
| Msa0015480 | Msa0317510 | 0.841830 | 3.745127e-58 | -8.615850e-47 |
| Msa0015480 | Msa0335820 | -0.814983 | 1.166997e-51 | -8.615850e-47 |
| Msa0015480 | Msa0340690 | 0.806779 | 6.970972e-50 | -8.615850e-47 |
| Msa0015480 | Msa0340710 | 0.801312 | 9.554780e-49 | -8.615850e-47 |
| Msa0015480 | Msa0349700 | 0.809914 | 1.495264e-50 | -8.615850e-47 |
| Msa0015480 | Msa0357760 | 0.830703 | 2.529444e-55 | -8.615850e-47 |
| Msa0015480 | Msa0357790 | 0.829855 | 4.074186e-55 | -8.615850e-47 |
| Msa0015480 | Msa0357830 | 0.840661 | 7.600259e-58 | -8.615850e-47 |
| Msa0015480 | Msa0357840 | 0.834032 | 3.788811e-56 | -8.615850e-47 |
| Msa0015480 | Msa0357870 | 0.822541 | 2.241530e-53 | -8.615850e-47 |
| Msa0015480 | Msa0371250 | 0.807421 | 5.097010e-50 | -8.615850e-47 |
| Msa0015480 | Msa0383800 | 0.802395 | 5.724923e-49 | -8.615850e-47 |
| Msa0015480 | Msa0385490 | 0.838848 | 2.253785e-57 | -8.615850e-47 |
| Msa0015480 | Msa0389390 | 0.806113 | 9.631252e-50 | -8.615850e-47 |
| Msa0015480 | Msa0412840 | 0.811716 | 6.091706e-51 | -8.615850e-47 |
| Msa0015480 | Msa0417330 | 0.802965 | 4.368360e-49 | -8.615850e-47 |
| Msa0015480 | Msa0429950 | 0.801273 | 9.734557e-49 | -8.615850e-47 |
| Msa0015480 | Msa0434180 | 0.818923 | 1.521485e-52 | -8.615850e-47 |
| Msa0015480 | Msa0435690 | 0.802610 | 5.171259e-49 | -8.615850e-47 |
| Msa0015480 | Msa0457510 | 0.830034 | 3.685740e-55 | -8.615850e-47 |
| Msa0015480 | Msa0468320 | 0.811998 | 5.287426e-51 | -8.615850e-47 |
| Msa0015480 | Msa0482180 | 0.819064 | 1.413241e-52 | -8.615850e-47 |
| Msa0015480 | Msa0485490 | 0.821132 | 4.750396e-53 | -8.615850e-47 |
| Msa0015480 | Msa0489610 | 0.804295 | 2.313839e-49 | -8.615850e-47 |
| Msa0015480 | Msa0530100 | 0.829953 | 3.857778e-55 | -8.615850e-47 |
| Msa0015480 | Msa0532930 | 0.817955 | 2.521267e-52 | -8.615850e-47 |
| Msa0015480 | Msa0549780 | 0.823910 | 1.073874e-53 | -8.615850e-47 |
| Msa0015480 | Msa0562440 | 0.800969 | 1.123161e-48 | -8.615850e-47 |
| Msa0015480 | Msa0587190 | 0.803772 | 2.971995e-49 | -8.615850e-47 |
| Msa0015480 | Msa0597000 | 0.814520 | 1.477454e-51 | -8.615850e-47 |
| Msa0015480 | Msa0600410 | -0.800319 | 1.523849e-48 | -8.615850e-47 |
| Msa0015480 | Msa0610130 | 0.838730 | 2.417112e-57 | -8.615850e-47 |
| Msa0015480 | Msa0610180 | 0.811944 | 5.433092e-51 | -8.615850e-47 |
| Msa0015480 | Msa0615220 | 0.800085 | 1.700620e-48 | -8.615850e-47 |
| Msa0015480 | Msa0619920 | 0.801905 | 7.221866e-49 | -8.615850e-47 |
| Msa0015480 | Msa0620620 | 0.803390 | 3.565980e-49 | -8.615850e-47 |
| Msa0015480 | Msa0620960 | 0.802235 | 6.176996e-49 | -8.615850e-47 |
| Msa0015480 | Msa0624960 | 0.812994 | 3.203946e-51 | -8.615850e-47 |
| Msa0015480 | Msa0649350 | 0.813479 | 2.506665e-51 | -8.615850e-47 |
| Msa0015480 | Msa0654010 | 0.812198 | 4.782860e-51 | -8.615850e-47 |
| Msa0015480 | Msa0664490 | 0.804654 | 1.947451e-49 | -8.615850e-47 |
| Msa0015480 | Msa0679550 | 0.813216 | 2.863424e-51 | -8.615850e-47 |
| Msa0015480 | Msa0689780 | 0.827376 | 1.618631e-54 | -8.615850e-47 |
| Msa0015480 | Msa0703910 | 0.834607 | 2.718100e-56 | -8.615850e-47 |
| Msa0015480 | Msa0706400 | 0.824384 | 8.313325e-54 | -8.615850e-47 |
| Msa0015480 | Msa0711150 | 0.822760 | 1.993241e-53 | -8.615850e-47 |
| Msa0015480 | Msa0715410 | 0.856969 | 2.245252e-62 | -8.615850e-47 |
| Msa0015480 | Msa0742150 | 0.823851 | 1.108574e-53 | -8.615850e-47 |
| Msa0015480 | Msa0751850 | 0.801341 | 9.426799e-49 | -8.615850e-47 |
| Msa0015480 | Msa0779090 | 0.806579 | 7.680943e-50 | -8.615850e-47 |
| Msa0015480 | Msa0823440 | 0.803736 | 3.023152e-49 | -8.615850e-47 |
| Msa0015480 | Msa0826760 | 0.815694 | 8.106539e-52 | -8.615850e-47 |
| Msa0015480 | Msa0860900 | -0.802054 | 6.730996e-49 | -8.615850e-47 |
| Msa0015480 | Msa0861470 | 0.817316 | 3.512734e-52 | -8.615850e-47 |
| Msa0015480 | Msa0861570 | 0.815411 | 9.372628e-52 | -8.615850e-47 |
| Msa0015480 | Msa0864470 | -0.821736 | 3.446206e-53 | -8.615850e-47 |
| Msa0015480 | Msa0865330 | 0.805260 | 1.454850e-49 | -8.615850e-47 |
| Msa0015480 | Msa0888990 | 0.809648 | 1.705449e-50 | -8.615850e-47 |
| Msa0015480 | Msa0901320 | 0.803624 | 3.190170e-49 | -8.615850e-47 |
| Msa0015480 | Msa0932100 | 0.825547 | 4.416427e-54 | -8.615850e-47 |
| Msa0015480 | Msa0932190 | 0.812096 | 5.035012e-51 | -8.615850e-47 |
| Msa0015480 | Msa0935850 | 0.805024 | 1.629726e-49 | -8.615850e-47 |
| Msa0015480 | Msa0937330 | 0.813544 | 2.425258e-51 | -8.615850e-47 |
| Msa0015480 | Msa0942550 | -0.838088 | 3.538893e-57 | -8.615850e-47 |
| Msa0015480 | Msa0942560 | -0.807611 | 4.645927e-50 | -8.615850e-47 |
| Msa0015480 | Msa0944610 | 0.801828 | 7.487632e-49 | -8.615850e-47 |
| Msa0015480 | Msa0945120 | 0.801461 | 8.907922e-49 | -8.615850e-47 |
| Msa0015480 | Msa0960740 | 0.813287 | 2.763209e-51 | -8.615850e-47 |
| Msa0015480 | Msa0970230 | 0.825324 | 4.988128e-54 | -8.615850e-47 |
| Msa0015480 | Msa0974630 | 0.823078 | 1.680626e-53 | -8.615850e-47 |
| Msa0015480 | Msa0994370 | 0.821303 | 4.338619e-53 | -8.615850e-47 |
| Msa0015480 | Msa0994390 | 0.842450 | 2.567210e-58 | -8.615850e-47 |
| Msa0015480 | Msa1000930 | 0.800099 | 1.689632e-48 | -8.615850e-47 |
| Msa0015480 | Msa1026940 | 0.803301 | 3.721979e-49 | -8.615850e-47 |
| Msa0015480 | Msa1029080 | -0.815823 | 7.589350e-52 | -8.615850e-47 |
| Msa0015480 | Msa1062030 | 0.817092 | 3.944410e-52 | -8.615850e-47 |
| Msa0015480 | Msa1064250 | 0.825404 | 4.775950e-54 | -8.615850e-47 |
| Msa0015480 | Msa1071320 | 0.815904 | 7.279132e-52 | -8.615850e-47 |
| Msa0015480 | Msa1081790 | -0.807593 | 4.684786e-50 | -8.615850e-47 |
| Msa0015480 | Msa1107190 | 0.819481 | 1.135288e-52 | -8.615850e-47 |
| Msa0015480 | Msa1111870 | 0.831395 | 1.710008e-55 | -8.615850e-47 |
| Msa0015480 | Msa1133230 | 0.808751 | 2.655599e-50 | -8.615850e-47 |
| Msa0015480 | Msa1133250 | 0.805925 | 1.054806e-49 | -8.615850e-47 |
| Msa0015480 | Msa1150790 | 0.813031 | 3.144431e-51 | -8.615850e-47 |
| Msa0015480 | Msa1152920 | 0.810183 | 1.308362e-50 | -8.615850e-47 |
| Msa0015480 | Msa1156170 | -0.807820 | 4.194312e-50 | -8.615850e-47 |
| Msa0015480 | Msa1176720 | 0.802508 | 5.427464e-49 | -8.615850e-47 |
| Msa0015480 | Msa1180500 | 0.816376 | 5.710317e-52 | -8.615850e-47 |
| Msa0015480 | Msa1200250 | 0.812124 | 4.965260e-51 | -8.615850e-47 |
| Msa0015480 | Msa1206360 | 0.811842 | 5.718738e-51 | -8.615850e-47 |
| Msa0015480 | Msa1207470 | -0.806778 | 6.971809e-50 | -8.615850e-47 |
| Msa0015480 | Msa1231840 | 0.827258 | 1.727668e-54 | -8.615850e-47 |
| Msa0015480 | Msa1236710 | 0.800647 | 1.306263e-48 | -8.615850e-47 |
| Msa0015480 | Msa1258370 | 0.807208 | 5.656402e-50 | -8.615850e-47 |
| Msa0015480 | Msa1270660 | 0.825368 | 4.868875e-54 | -8.615850e-47 |
| Msa0015480 | Msa1270730 | 0.820248 | 7.582026e-53 | -8.615850e-47 |
| Msa0015480 | Msa1274560 | 0.806397 | 8.391499e-50 | -8.615850e-47 |
| Msa0015480 | Msa1276340 | 0.819952 | 8.861178e-53 | -8.615850e-47 |
| Msa0015480 | Msa1276440 | 0.803206 | 3.894305e-49 | -8.615850e-47 |
| Msa0015480 | Msa1287460 | 0.802043 | 6.765777e-49 | -8.615850e-47 |
| Msa0015480 | Msa1312520 | 0.818973 | 1.482282e-52 | -8.615850e-47 |
| Msa0015480 | Msa1316360 | 0.801055 | 1.078497e-48 | -8.615850e-47 |
| Msa0015480 | Msa1332050 | 0.800923 | 1.147494e-48 | -8.615850e-47 |
| Msa0015480 | Msa1355890 | 0.849114 | 3.980209e-60 | -8.615850e-47 |
| Msa0015480 | Msa1357430 | 0.800126 | 1.668298e-48 | -8.615850e-47 |
| Msa0015480 | Msa1358670 | 0.806607 | 7.579131e-50 | -8.615850e-47 |
| Msa0015480 | Msa1364210 | 0.801698 | 7.964561e-49 | -8.615850e-47 |
| Msa0015480 | Msa1381480 | 0.801759 | 7.736081e-49 | -8.615850e-47 |
| Msa0015480 | Msa1382790 | 0.820636 | 6.175976e-53 | -8.615850e-47 |
| Msa0015480 | Msa1388830 | 0.800079 | 1.705036e-48 | -8.615850e-47 |
| Msa0015480 | Msa1403340 | 0.825440 | 4.683033e-54 | -8.615850e-47 |
| Msa0015480 | Msa1420270 | 0.819983 | 8.719178e-53 | -8.615850e-47 |
| Msa0015480 | Msa1443610 | 0.801690 | 7.994433e-49 | -8.615850e-47 |
| Msa0015480 | Msa1454450 | 0.806503 | 7.971756e-50 | -8.615850e-47 |
| Msa0015480 | Msa1455490 | 0.807695 | 4.457478e-50 | -8.615850e-47 |
| Msa0015480 | Msa1457160 | 0.824050 | 9.956535e-54 | -8.615850e-47 |
| Msa0015480 | Msa1459760 | -0.823796 | 1.141902e-53 | -8.615850e-47 |
| Msa0015480 | Msa1460800 | 0.801919 | 7.172726e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015480 | MtrunA17_Chr1g0166481 | 97.080 | 274 | 8 | 0 | 1 | 274 | 1 | 274 | 0.0 | 552 |
| Msa0015480 | MtrunA17_Chr1g0187481 | 60.432 | 278 | 106 | 1 | 1 | 274 | 1 | 278 | 8.79e-120 | 343 |
| Msa0015480 | MtrunA17_Chr8g0360351 | 37.891 | 256 | 129 | 6 | 41 | 273 | 33 | 281 | 4.93e-39 | 137 |
| Msa0015480 | MtrunA17_Chr2g0279151 | 34.457 | 267 | 145 | 5 | 30 | 273 | 21 | 280 | 2.15e-34 | 125 |
| Msa0015480 | MtrunA17_Chr4g0050381 | 32.143 | 280 | 160 | 5 | 17 | 273 | 4 | 276 | 4.93e-34 | 124 |
| Msa0015480 | MtrunA17_Chr2g0317021 | 36.328 | 256 | 133 | 6 | 41 | 273 | 84 | 332 | 6.21e-33 | 123 |
| Msa0015480 | MtrunA17_Chr5g0426141 | 35.398 | 226 | 121 | 4 | 71 | 273 | 58 | 281 | 4.77e-32 | 119 |
| Msa0015480 | MtrunA17_Chr3g0115851 | 32.743 | 226 | 127 | 4 | 71 | 273 | 58 | 281 | 6.20e-28 | 108 |
| Msa0015480 | MtrunA17_Chr4g0051661 | 32.031 | 256 | 143 | 5 | 41 | 273 | 150 | 397 | 4.56e-25 | 102 |
| Msa0015480 | MtrunA17_Chr1g0150451 | 28.837 | 215 | 132 | 3 | 80 | 273 | 109 | 323 | 2.01e-24 | 100 |
| Msa0015480 | MtrunA17_Chr3g0136711 | 28.372 | 215 | 133 | 3 | 80 | 273 | 66 | 280 | 2.42e-23 | 96.7 |
| Msa0015480 | MtrunA17_Chr1g0212961 | 26.728 | 217 | 134 | 6 | 79 | 274 | 126 | 338 | 5.92e-17 | 79.7 |
| Msa0015480 | MtrunA17_Chr3g0126511 | 26.840 | 231 | 144 | 5 | 67 | 274 | 113 | 341 | 3.04e-14 | 72.0 |
| Msa0015480 | MtrunA17_Chr5g0407161 | 26.104 | 249 | 148 | 9 | 59 | 273 | 99 | 345 | 1.31e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015480 | AT3G23360.1 | 43.885 | 278 | 132 | 6 | 1 | 273 | 1 | 259 | 3.20e-71 | 220 |
| Msa0015480 | AT4G28400.3 | 35.938 | 256 | 134 | 5 | 41 | 273 | 12 | 260 | 7.24e-38 | 134 |
| Msa0015480 | AT4G28400.1 | 35.938 | 256 | 134 | 5 | 41 | 273 | 34 | 282 | 1.16e-37 | 134 |
| Msa0015480 | AT2G20630.1 | 34.375 | 256 | 138 | 5 | 41 | 273 | 30 | 278 | 1.50e-37 | 134 |
| Msa0015480 | AT2G20630.2 | 33.984 | 256 | 139 | 5 | 41 | 273 | 30 | 278 | 3.76e-35 | 128 |
| Msa0015480 | AT3G15260.2 | 33.574 | 277 | 153 | 7 | 20 | 273 | 20 | 288 | 1.54e-34 | 126 |
| Msa0015480 | AT3G15260.1 | 33.574 | 277 | 153 | 7 | 20 | 273 | 20 | 288 | 1.54e-34 | 126 |
| Msa0015480 | AT1G22280.1 | 34.222 | 225 | 123 | 4 | 72 | 273 | 58 | 280 | 6.56e-30 | 114 |
| Msa0015480 | AT1G22280.3 | 33.766 | 231 | 122 | 5 | 72 | 273 | 58 | 286 | 3.67e-29 | 112 |
| Msa0015480 | AT1G78200.1 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.31e-28 | 110 |
| Msa0015480 | AT1G78200.3 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.31e-28 | 110 |
| Msa0015480 | AT1G78200.2 | 34.274 | 248 | 135 | 6 | 52 | 273 | 37 | 282 | 1.31e-28 | 110 |
| Msa0015480 | AT1G78200.5 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 1.42e-28 | 109 |
| Msa0015480 | AT1G78200.4 | 35.111 | 225 | 118 | 6 | 75 | 273 | 15 | 237 | 1.42e-28 | 109 |
| Msa0015480 | AT1G34750.2 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.72e-27 | 107 |
| Msa0015480 | AT1G34750.1 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.72e-27 | 107 |
| Msa0015480 | AT1G34750.3 | 30.496 | 282 | 171 | 4 | 15 | 273 | 2 | 281 | 1.72e-27 | 107 |
| Msa0015480 | AT4G31750.2 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 5.00e-25 | 101 |
| Msa0015480 | AT4G31750.1 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 5.64e-25 | 101 |
| Msa0015480 | AT4G31750.3 | 28.837 | 215 | 132 | 3 | 80 | 273 | 65 | 279 | 5.64e-25 | 101 |
| Msa0015480 | AT2G34740.1 | 29.412 | 255 | 148 | 5 | 43 | 273 | 88 | 334 | 2.25e-23 | 97.8 |
| Msa0015480 | AT5G24940.1 | 29.224 | 219 | 132 | 5 | 77 | 273 | 62 | 279 | 3.86e-23 | 98.6 |
| Msa0015480 | AT4G28400.2 | 33.803 | 213 | 111 | 5 | 41 | 230 | 34 | 239 | 4.83e-21 | 89.7 |
| Msa0015480 | AT5G10740.1 | 26.512 | 215 | 137 | 3 | 80 | 273 | 65 | 279 | 7.89e-21 | 90.9 |
| Msa0015480 | AT5G10740.2 | 26.512 | 215 | 137 | 3 | 80 | 273 | 65 | 279 | 7.89e-21 | 90.9 |
| Msa0015480 | AT5G53140.1 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 4.47e-17 | 80.9 |
| Msa0015480 | AT5G53140.2 | 26.512 | 215 | 137 | 3 | 80 | 273 | 133 | 347 | 4.47e-17 | 80.9 |
| Msa0015480 | AT2G34740.2 | 27.830 | 212 | 121 | 5 | 43 | 230 | 102 | 305 | 5.93e-13 | 68.2 |
| Msa0015480 | AT2G34740.3 | 27.830 | 212 | 121 | 5 | 43 | 230 | 84 | 287 | 6.30e-13 | 68.2 |
| Msa0015480 | AT1G34750.4 | 27.197 | 239 | 149 | 4 | 15 | 230 | 2 | 238 | 1.63e-11 | 63.2 |
| Msa0015480 | AT3G51470.2 | 22.857 | 245 | 160 | 6 | 57 | 273 | 40 | 283 | 1.90e-11 | 63.9 |
| Msa0015480 | AT3G51470.1 | 22.634 | 243 | 159 | 6 | 59 | 273 | 86 | 327 | 2.39e-11 | 63.9 |
Find 51 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATTGGCTTGCAAATATT+TGG | 0.170520 | 1_1:-25015052 | Msa0015470:intron |
| GAGATTCTTGTCAAAATAAT+TGG | 0.178491 | 1_1:-25015067 | Msa0015470:intron |
| TGCTCTCTTGAGTGTTTCTT+TGG | 0.223443 | 1_1:-25015657 | Msa0015470:intron |
| ACATCTGTGATGATAATAAA+TGG | 0.273873 | 1_1:+25015746 | Msa0015480:CDS |
| TGATAAGATTCACTGCTTCT+TGG | 0.281632 | 1_1:-25016736 | Msa0015470:intron |
| AACTTGTGGTTGGAAGTTAT+TGG | 0.296396 | 1_1:+25016476 | Msa0015480:CDS |
| GTGGAGCATGATTGGATTAA+TGG | 0.328700 | 1_1:+25014919 | Msa0015480:CDS |
| GAATGATTAAACATGAAATA+TGG | 0.349116 | 1_1:-25016829 | Msa0015470:intron |
| TAGTACTGAATTTGTGATCT+TGG | 0.359368 | 1_1:+25016507 | Msa0015480:CDS |
| CTTAGGAATCTTTGATACTT+TGG | 0.361268 | 1_1:+25015014 | Msa0015480:CDS |
| TTGACTTGCACAGGCACTTC+GGG | 0.367269 | 1_1:+25014798 | Msa0015480:intron |
| TCTGTGATACCAATGTTTCT+TGG | 0.370921 | 1_1:-25015864 | Msa0015470:intron |
| ACATGATGACCATGTGATAT+TGG | 0.372321 | 1_1:-25014895 | Msa0015470:intron |
| CGGGTGAAACTCTCATGTTT+AGG | 0.373283 | 1_1:+25014817 | Msa0015480:CDS |
| ATATTTCATGTTTAATCATT+CGG | 0.384965 | 1_1:+25016831 | Msa0015480:CDS |
| AAGAAGCAGTGAATCTTATC+AGG | 0.393702 | 1_1:+25016738 | Msa0015480:CDS |
| TCAGATGAAACATGCATCAT+AGG | 0.400144 | 1_1:+25015719 | Msa0015480:CDS |
| GGAATCTTTGATACTTTGGT+TGG | 0.403046 | 1_1:+25015018 | Msa0015480:CDS |
| ACAAGAAGCAGCAGAGTGTT+TGG | 0.405610 | 1_1:+25016775 | Msa0015480:CDS |
| TCTTGGCAAGCAATGGCATA+TGG | 0.410623 | 1_1:+25016524 | Msa0015480:CDS |
| GGCGTAGCTTATCAGACAAT+TGG | 0.418185 | 1_1:+25015824 | Msa0015480:CDS |
| GTGATACAAAGAGAGCAAAT+TGG | 0.443813 | 1_1:+25014973 | Msa0015480:CDS |
| GTAAGAAGAAATCATGGAGT+TGG | 0.448595 | 1_1:+25014850 | Msa0015480:CDS |
| ATCATGTGGTGGAGCATGAT+TGG | 0.450402 | 1_1:+25014911 | Msa0015480:CDS |
| AATTATGTTAGTCTCATTTG+AGG | 0.462042 | 1_1:+25015627 | Msa0015480:intron |
| AGAAAGGTAAGAAGAAATCA+TGG | 0.465978 | 1_1:+25014844 | Msa0015480:CDS |
| TGGCTAAGGAAGCATTGGTT+AGG | 0.478204 | 1_1:+25016795 | Msa0015480:CDS |
| TGTGAATCAGGTAATGCAAC+AGG | 0.482738 | 1_1:+25016430 | Msa0015480:intron |
| AGCAGCAGAGTGTTTGGCTA+AGG | 0.497684 | 1_1:+25016781 | Msa0015480:CDS |
| GAGACAGAATTGTGGTACTT+AGG | 0.501693 | 1_1:+25014997 | Msa0015480:CDS |
| TTCTAAAGCTTCAGAACTTG+TGG | 0.505454 | 1_1:+25016462 | Msa0015480:CDS |
| AAAGCTTCAGAACTTGTGGT+TGG | 0.510242 | 1_1:+25016466 | Msa0015480:CDS |
| ATTGACTTGCACAGGCACTT+CGG | 0.511916 | 1_1:+25014797 | Msa0015480:intron |
| AAACACTCTGCTGCTTCTTG+TGG | 0.521856 | 1_1:-25016773 | Msa0015470:intron |
| CTTGGCAAGCAATGGCATAT+GGG | 0.527736 | 1_1:+25016525 | Msa0015480:CDS |
| CTCATGTTTAGGAAATAGAA+AGG | 0.530586 | 1_1:+25014828 | Msa0015480:CDS |
| GTGTTTGGCTAAGGAAGCAT+TGG | 0.535898 | 1_1:+25016790 | Msa0015480:CDS |
| ATCAATCATCCAAGAAACAT+TGG | 0.538131 | 1_1:+25015855 | Msa0015480:CDS |
| GAGTTGGAAGCAAGCCATCA+TGG | 0.546613 | 1_1:+25014866 | Msa0015480:CDS |
| GAATCTTATCAGGCACATAG+AGG | 0.593854 | 1_1:+25016748 | Msa0015480:CDS |
| AGTTCTGTAATCTCCGATGT+TGG | 0.599281 | 1_1:-25015786 | Msa0015470:intron |
| AGGTAATGCAACAGGTACAA+AGG | 0.604493 | 1_1:+25016438 | Msa0015480:intron |
| TTTGTGATCTTGGCAAGCAA+TGG | 0.607158 | 1_1:+25016517 | Msa0015480:CDS |
| ATCACATGGTCATCATGTGG+TGG | 0.639046 | 1_1:+25014900 | Msa0015480:CDS |
| GATATTGGCATCATCCATGA+TGG | 0.650715 | 1_1:-25014880 | Msa0015470:intron |
| AAACTCGTGCTAGCCAACAT+CGG | 0.656947 | 1_1:+25015773 | Msa0015480:CDS |
| GGCAAGCAATGGCATATGGG+AGG | 0.662078 | 1_1:+25016528 | Msa0015480:CDS |
| ACACTCAAGAGAGCATACCT+AGG | 0.689445 | 1_1:+25015665 | Msa0015480:CDS |
| TGGATGATGCCAATATCACA+TGG | 0.692201 | 1_1:+25014886 | Msa0015480:CDS |
| AAATTGGTGAGACAGAATTG+TGG | 0.696148 | 1_1:+25014989 | Msa0015480:CDS |
| AATATCACATGGTCATCATG+TGG | 0.739236 | 1_1:+25014897 | Msa0015480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAAAACAAATATTTAA+GGG | + | chr1_1:25014699-25014718 | Msa0015480:intron | 10.0% |
| !! | ATAAGAAAACAAATATTTAA+GGG | + | chr1_1:25014699-25014718 | Msa0015480:intron | 10.0% |
| !! | CATAAGAAAACAAATATTTA+AGG | + | chr1_1:25014698-25014717 | Msa0015480:intron | 15.0% |
| !! | TTTAAGGGAAAAATAATATA+TGG | + | chr1_1:25014714-25014733 | Msa0015480:intron | 15.0% |
| !! | TAATATTATTATATTGAGAG+AGG | - | chr1_1:25016304-25016323 | Msa0015470:intron | 15.0% |
| !!! | TTTGAAATTTCGTAATAAAT+CGG | + | chr1_1:25016627-25016646 | Msa0015480:intron | 15.0% |
| !! | ATATTTCATGTTTAATCATT+CGG | + | chr1_1:25016831-25016850 | Msa0015480:CDS | 15.0% |
| !! | CATAAGAAAACAAATATTTA+AGG | + | chr1_1:25014698-25014717 | Msa0015480:intron | 15.0% |
| !! | TTTAAGGGAAAAATAATATA+TGG | + | chr1_1:25014714-25014733 | Msa0015480:intron | 15.0% |
| !! | TAATATTATTATATTGAGAG+AGG | - | chr1_1:25016304-25016323 | Msa0015470:intron | 15.0% |
| !!! | TTTGAAATTTCGTAATAAAT+CGG | + | chr1_1:25016627-25016646 | Msa0015480:intron | 15.0% |
| !! | ATATTTCATGTTTAATCATT+CGG | + | chr1_1:25016831-25016850 | Msa0015480:CDS | 15.0% |
| !! | TAAAGAACATAATCTCATAA+GGG | - | chr1_1:25014746-25014765 | Msa0015470:intron | 20.0% |
| !! | ATAAAGAACATAATCTCATA+AGG | - | chr1_1:25014747-25014766 | Msa0015470:intron | 20.0% |
| !! | TACTTTAATGAAGAGTAAAA+GGG | + | chr1_1:25015499-25015518 | Msa0015480:intron | 20.0% |
| !! | GAGAAAATAGGAAATTATAT+GGG | - | chr1_1:25015564-25015583 | Msa0015470:intron | 20.0% |
| !! | TGAGAAAATAGGAAATTATA+TGG | - | chr1_1:25015565-25015584 | Msa0015470:intron | 20.0% |
| !!! | TCTTTTTGAAATGTTTAGAA+TGG | + | chr1_1:25015918-25015937 | Msa0015480:intron | 20.0% |
| !!! | TTGTAATGGATAAATATCAT+GGG | - | chr1_1:25016559-25016578 | Msa0015470:intron | 20.0% |
| !!! | TTTGTAATGGATAAATATCA+TGG | - | chr1_1:25016560-25016579 | Msa0015470:intron | 20.0% |
| !!! | TTACTCAGAATTTTTTGTAA+TGG | - | chr1_1:25016573-25016592 | Msa0015470:intron | 20.0% |
| !! | GAATGATTAAACATGAAATA+TGG | - | chr1_1:25016832-25016851 | Msa0015470:intron | 20.0% |
| !! | TAAAGAACATAATCTCATAA+GGG | - | chr1_1:25014746-25014765 | Msa0015470:intron | 20.0% |
| !! | ATAAAGAACATAATCTCATA+AGG | - | chr1_1:25014747-25014766 | Msa0015470:intron | 20.0% |
| !! | TACTTTAATGAAGAGTAAAA+GGG | + | chr1_1:25015499-25015518 | Msa0015480:intron | 20.0% |
| !! | GAGAAAATAGGAAATTATAT+GGG | - | chr1_1:25015564-25015583 | Msa0015470:intron | 20.0% |
| !! | TGAGAAAATAGGAAATTATA+TGG | - | chr1_1:25015565-25015584 | Msa0015470:intron | 20.0% |
| !!! | TCTTTTTGAAATGTTTAGAA+TGG | + | chr1_1:25015918-25015937 | Msa0015480:intron | 20.0% |
| !!! | TTGTAATGGATAAATATCAT+GGG | - | chr1_1:25016559-25016578 | Msa0015470:intron | 20.0% |
| !!! | TTTGTAATGGATAAATATCA+TGG | - | chr1_1:25016560-25016579 | Msa0015470:intron | 20.0% |
| !!! | TTACTCAGAATTTTTTGTAA+TGG | - | chr1_1:25016573-25016592 | Msa0015470:intron | 20.0% |
| !! | GAATGATTAAACATGAAATA+TGG | - | chr1_1:25016832-25016851 | Msa0015470:intron | 20.0% |
| !!! | ATAATTGGCTTGCAAATATT+TGG | - | chr1_1:25015055-25015074 | Msa0015470:intron | 25.0% |
| ! | GAGATTCTTGTCAAAATAAT+TGG | - | chr1_1:25015070-25015089 | Msa0015470:intron | 25.0% |
| !! | TCTATTTTCATAAGCTATCT+TGG | + | chr1_1:25015312-25015331 | Msa0015480:intron | 25.0% |
| ! | GAAAGTTTATGGATATAAGA+TGG | + | chr1_1:25015334-25015353 | Msa0015480:intron | 25.0% |
| ! | GTACTTTAATGAAGAGTAAA+AGG | + | chr1_1:25015498-25015517 | Msa0015480:intron | 25.0% |
| !! | AATTATGTTAGTCTCATTTG+AGG | + | chr1_1:25015627-25015646 | Msa0015480:intron | 25.0% |
| ! | ACATCTGTGATGATAATAAA+TGG | + | chr1_1:25015746-25015765 | Msa0015480:CDS | 25.0% |
| ! | TAAGCTATGAAAATAGCTTA+TGG | + | chr1_1:25016103-25016122 | Msa0015480:intron | 25.0% |
| !!! | TCCATCTTTTTCATTCAATT+GGG | + | chr1_1:25016253-25016272 | Msa0015480:intron | 25.0% |
| !! | CTATAAGTGAGTATATGTTT+TGG | + | chr1_1:25016354-25016373 | Msa0015480:intron | 25.0% |
| ! | TTGGTTGTCACATTTAATAA+TGG | + | chr1_1:25016373-25016392 | Msa0015480:intron | 25.0% |
| !!! | TGTAATGGATAAATATCATG+GGG | - | chr1_1:25016558-25016577 | Msa0015470:intron | 25.0% |
| !!! | ATAATTGGCTTGCAAATATT+TGG | - | chr1_1:25015055-25015074 | Msa0015470:intron | 25.0% |
| ! | GAGATTCTTGTCAAAATAAT+TGG | - | chr1_1:25015070-25015089 | Msa0015470:intron | 25.0% |
| !! | TCTATTTTCATAAGCTATCT+TGG | + | chr1_1:25015312-25015331 | Msa0015480:intron | 25.0% |
| ! | GAAAGTTTATGGATATAAGA+TGG | + | chr1_1:25015334-25015353 | Msa0015480:intron | 25.0% |
| ! | GTACTTTAATGAAGAGTAAA+AGG | + | chr1_1:25015498-25015517 | Msa0015480:intron | 25.0% |
| !! | AATTATGTTAGTCTCATTTG+AGG | + | chr1_1:25015627-25015646 | Msa0015480:intron | 25.0% |
| ! | ACATCTGTGATGATAATAAA+TGG | + | chr1_1:25015746-25015765 | Msa0015480:CDS | 25.0% |
| ! | TAAGCTATGAAAATAGCTTA+TGG | + | chr1_1:25016103-25016122 | Msa0015480:intron | 25.0% |
| !!! | TCCATCTTTTTCATTCAATT+GGG | + | chr1_1:25016253-25016272 | Msa0015480:intron | 25.0% |
| !! | CTATAAGTGAGTATATGTTT+TGG | + | chr1_1:25016354-25016373 | Msa0015480:intron | 25.0% |
| ! | TTGGTTGTCACATTTAATAA+TGG | + | chr1_1:25016373-25016392 | Msa0015480:intron | 25.0% |
| !!! | TGTAATGGATAAATATCATG+GGG | - | chr1_1:25016558-25016577 | Msa0015470:intron | 25.0% |
| ! | AGATTTTCACTTCAAAGTCA+AGG | + | chr1_1:25014617-25014636 | Msa0015480:CDS | 30.0% |
| CTTCATGTAACAATGGAATA+AGG | - | chr1_1:25014665-25014684 | Msa0015470:intron | 30.0% | |
| CTTATTCCATTGTTACATGA+AGG | + | chr1_1:25014663-25014682 | Msa0015480:intron | 30.0% | |
| CTCATGTTTAGGAAATAGAA+AGG | + | chr1_1:25014828-25014847 | Msa0015480:CDS | 30.0% | |
| AGAAAGGTAAGAAGAAATCA+TGG | + | chr1_1:25014844-25014863 | Msa0015480:CDS | 30.0% | |
| CTTAGGAATCTTTGATACTT+TGG | + | chr1_1:25015014-25015033 | Msa0015480:CDS | 30.0% | |
| ! | TTTTGACAAGAATCTCAAAG+AGG | + | chr1_1:25015074-25015093 | Msa0015480:CDS | 30.0% |
| AAGCTATCTTGGAAAGTTTA+TGG | + | chr1_1:25015323-25015342 | Msa0015480:intron | 30.0% | |
| GTCTTTGCTTGTTTACTTAT+TGG | + | chr1_1:25015474-25015493 | Msa0015480:intron | 30.0% | |
| GCAATAAATCACAATGCATT+TGG | - | chr1_1:25015526-25015545 | Msa0015470:intron | 30.0% | |
| ! | CCAGAAGTATATGAGAAAAT+AGG | - | chr1_1:25015576-25015595 | Msa0015470:intron | 30.0% |
| ! | CCTATTTTCTCATATACTTC+TGG | + | chr1_1:25015573-25015592 | Msa0015480:intron | 30.0% |
| ATCAATCATCCAAGAAACAT+TGG | + | chr1_1:25015855-25015874 | Msa0015480:CDS | 30.0% | |
| GCTTATGGACATATTATAAG+TGG | + | chr1_1:25016118-25016137 | Msa0015480:intron | 30.0% | |
| ! | ATAAGCATTTGAGATGGTTT+GGG | - | chr1_1:25016158-25016177 | Msa0015470:intron | 30.0% |
| ! | TTTCTTACTTAGGGTTTGTT+TGG | - | chr1_1:25016213-25016232 | Msa0015470:intron | 30.0% |
| !! | GCTGATTTGTTTCTTACTTA+GGG | - | chr1_1:25016222-25016241 | Msa0015470:intron | 30.0% |
| !! | TGCTGATTTGTTTCTTACTT+AGG | - | chr1_1:25016223-25016242 | Msa0015470:intron | 30.0% |
| !! | CTCCATCTTTTTCATTCAAT+TGG | + | chr1_1:25016252-25016271 | Msa0015480:intron | 30.0% |
| TCCCAATTGAATGAAAAAGA+TGG | - | chr1_1:25016257-25016276 | Msa0015470:intron | 30.0% | |
| ! | TAGTACTGAATTTGTGATCT+TGG | + | chr1_1:25016507-25016526 | Msa0015480:CDS | 30.0% |
| ! | TTCTGAGTAAAACATTTTCG+AGG | + | chr1_1:25016583-25016602 | Msa0015480:intron | 30.0% |
| TTCATCACCTACAAATACAT+GGG | - | chr1_1:25016713-25016732 | Msa0015470:intron | 30.0% | |
| ! | AGATTTTCACTTCAAAGTCA+AGG | + | chr1_1:25014617-25014636 | Msa0015480:CDS | 30.0% |
| CTTCATGTAACAATGGAATA+AGG | - | chr1_1:25014665-25014684 | Msa0015470:intron | 30.0% | |
| CTTATTCCATTGTTACATGA+AGG | + | chr1_1:25014663-25014682 | Msa0015480:intron | 30.0% | |
| CTCATGTTTAGGAAATAGAA+AGG | + | chr1_1:25014828-25014847 | Msa0015480:CDS | 30.0% | |
| AGAAAGGTAAGAAGAAATCA+TGG | + | chr1_1:25014844-25014863 | Msa0015480:CDS | 30.0% | |
| CTTAGGAATCTTTGATACTT+TGG | + | chr1_1:25015014-25015033 | Msa0015480:CDS | 30.0% | |
| ! | TTTTGACAAGAATCTCAAAG+AGG | + | chr1_1:25015074-25015093 | Msa0015480:CDS | 30.0% |
| AAGCTATCTTGGAAAGTTTA+TGG | + | chr1_1:25015323-25015342 | Msa0015480:intron | 30.0% | |
| GTCTTTGCTTGTTTACTTAT+TGG | + | chr1_1:25015474-25015493 | Msa0015480:intron | 30.0% | |
| GCAATAAATCACAATGCATT+TGG | - | chr1_1:25015526-25015545 | Msa0015470:intron | 30.0% | |
| ! | CCAGAAGTATATGAGAAAAT+AGG | - | chr1_1:25015576-25015595 | Msa0015470:intron | 30.0% |
| ! | CCTATTTTCTCATATACTTC+TGG | + | chr1_1:25015573-25015592 | Msa0015480:intron | 30.0% |
| ATCAATCATCCAAGAAACAT+TGG | + | chr1_1:25015855-25015874 | Msa0015480:CDS | 30.0% | |
| GCTTATGGACATATTATAAG+TGG | + | chr1_1:25016118-25016137 | Msa0015480:intron | 30.0% | |
| ! | ATAAGCATTTGAGATGGTTT+GGG | - | chr1_1:25016158-25016177 | Msa0015470:intron | 30.0% |
| ! | TTTCTTACTTAGGGTTTGTT+TGG | - | chr1_1:25016213-25016232 | Msa0015470:intron | 30.0% |
| !! | GCTGATTTGTTTCTTACTTA+GGG | - | chr1_1:25016222-25016241 | Msa0015470:intron | 30.0% |
| !! | TGCTGATTTGTTTCTTACTT+AGG | - | chr1_1:25016223-25016242 | Msa0015470:intron | 30.0% |
| !! | CTCCATCTTTTTCATTCAAT+TGG | + | chr1_1:25016252-25016271 | Msa0015480:intron | 30.0% |
| TCCCAATTGAATGAAAAAGA+TGG | - | chr1_1:25016257-25016276 | Msa0015470:intron | 30.0% | |
| ! | TAGTACTGAATTTGTGATCT+TGG | + | chr1_1:25016507-25016526 | Msa0015480:CDS | 30.0% |
| ! | TTCTGAGTAAAACATTTTCG+AGG | + | chr1_1:25016583-25016602 | Msa0015480:intron | 30.0% |
| TTCATCACCTACAAATACAT+GGG | - | chr1_1:25016713-25016732 | Msa0015470:intron | 30.0% | |
| AAAGAGCCTTCATGTAACAA+TGG | - | chr1_1:25014672-25014691 | Msa0015470:intron | 35.0% | |
| !! | GAATTTCTATTGACTTGCAC+AGG | + | chr1_1:25014789-25014808 | Msa0015480:intron | 35.0% |
| GTAAGAAGAAATCATGGAGT+TGG | + | chr1_1:25014850-25014869 | Msa0015480:CDS | 35.0% | |
| ACATGATGACCATGTGATAT+TGG | - | chr1_1:25014898-25014917 | Msa0015470:intron | 35.0% | |
| AATATCACATGGTCATCATG+TGG | + | chr1_1:25014897-25014916 | Msa0015480:CDS | 35.0% | |
| GTGATACAAAGAGAGCAAAT+TGG | + | chr1_1:25014973-25014992 | Msa0015480:CDS | 35.0% | |
| AAATTGGTGAGACAGAATTG+TGG | + | chr1_1:25014989-25015008 | Msa0015480:CDS | 35.0% | |
| GGAATCTTTGATACTTTGGT+TGG | + | chr1_1:25015018-25015037 | Msa0015480:CDS | 35.0% | |
| !! | GCTCAAAAGCATCATTGATT+TGG | - | chr1_1:25015155-25015174 | Msa0015470:intron | 35.0% |
| ! | ATCAATGATGCTTTTGAGCT+TGG | + | chr1_1:25015156-25015175 | Msa0015480:intron | 35.0% |
| ! | TCAATGATGCTTTTGAGCTT+GGG | + | chr1_1:25015157-25015176 | Msa0015480:intron | 35.0% |
| CTCGAATGGAAGAACAAAAT+AGG | + | chr1_1:25015185-25015204 | Msa0015480:intron | 35.0% | |
| AGTCTGACAAGTACTTATGT+CGG | + | chr1_1:25015404-25015423 | Msa0015480:intron | 35.0% | |
| !!! | TGATCTTTGTTTTTGCACCT+AGG | - | chr1_1:25015685-25015704 | Msa0015470:intron | 35.0% |
| TCAGATGAAACATGCATCAT+AGG | + | chr1_1:25015719-25015738 | Msa0015480:CDS | 35.0% | |
| ! | AGAACTGTTTTGTGTAGAGA+TGG | + | chr1_1:25015803-25015822 | Msa0015480:CDS | 35.0% |
| TCTGTGATACCAATGTTTCT+TGG | - | chr1_1:25015867-25015886 | Msa0015470:intron | 35.0% | |
| !!! | TGGTATCACAGACTTTTTTC+AGG | + | chr1_1:25015875-25015894 | Msa0015480:CDS | 35.0% |
| !! | AATGGCTATGTCGATTCATT+TGG | + | chr1_1:25015936-25015955 | Msa0015480:intron | 35.0% |
| !! | ATGGCTATGTCGATTCATTT+GGG | + | chr1_1:25015937-25015956 | Msa0015480:intron | 35.0% |
| AAGCAGTATTAGGTCATGTT+TGG | + | chr1_1:25015967-25015986 | Msa0015480:intron | 35.0% | |
| ! | CATAAGCATTTGAGATGGTT+TGG | - | chr1_1:25016159-25016178 | Msa0015470:intron | 35.0% |
| ACTGTCATAAGCATTTGAGA+TGG | - | chr1_1:25016164-25016183 | Msa0015470:intron | 35.0% | |
| AGAGTAATAGCATGTGAATC+AGG | + | chr1_1:25016418-25016437 | Msa0015480:intron | 35.0% | |
| !! | TTCTAAAGCTTCAGAACTTG+TGG | + | chr1_1:25016462-25016481 | Msa0015480:CDS | 35.0% |
| AACTTGTGGTTGGAAGTTAT+TGG | + | chr1_1:25016476-25016495 | Msa0015480:CDS | 35.0% | |
| CTTCATCACCTACAAATACA+TGG | - | chr1_1:25016714-25016733 | Msa0015470:intron | 35.0% | |
| TGATAAGATTCACTGCTTCT+TGG | - | chr1_1:25016739-25016758 | Msa0015470:intron | 35.0% | |
| AAGAAGCAGTGAATCTTATC+AGG | + | chr1_1:25016738-25016757 | Msa0015480:CDS | 35.0% | |
| AAAGAGCCTTCATGTAACAA+TGG | - | chr1_1:25014672-25014691 | Msa0015470:intron | 35.0% | |
| !! | GAATTTCTATTGACTTGCAC+AGG | + | chr1_1:25014789-25014808 | Msa0015480:intron | 35.0% |
| GTAAGAAGAAATCATGGAGT+TGG | + | chr1_1:25014850-25014869 | Msa0015480:CDS | 35.0% | |
| ACATGATGACCATGTGATAT+TGG | - | chr1_1:25014898-25014917 | Msa0015470:intron | 35.0% | |
| AATATCACATGGTCATCATG+TGG | + | chr1_1:25014897-25014916 | Msa0015480:CDS | 35.0% | |
| GTGATACAAAGAGAGCAAAT+TGG | + | chr1_1:25014973-25014992 | Msa0015480:CDS | 35.0% | |
| AAATTGGTGAGACAGAATTG+TGG | + | chr1_1:25014989-25015008 | Msa0015480:CDS | 35.0% | |
| GGAATCTTTGATACTTTGGT+TGG | + | chr1_1:25015018-25015037 | Msa0015480:CDS | 35.0% | |
| !! | GCTCAAAAGCATCATTGATT+TGG | - | chr1_1:25015155-25015174 | Msa0015470:intron | 35.0% |
| ! | ATCAATGATGCTTTTGAGCT+TGG | + | chr1_1:25015156-25015175 | Msa0015480:intron | 35.0% |
| ! | TCAATGATGCTTTTGAGCTT+GGG | + | chr1_1:25015157-25015176 | Msa0015480:intron | 35.0% |
| CTCGAATGGAAGAACAAAAT+AGG | + | chr1_1:25015185-25015204 | Msa0015480:intron | 35.0% | |
| AGTCTGACAAGTACTTATGT+CGG | + | chr1_1:25015404-25015423 | Msa0015480:intron | 35.0% | |
| !!! | TGATCTTTGTTTTTGCACCT+AGG | - | chr1_1:25015685-25015704 | Msa0015470:intron | 35.0% |
| TCAGATGAAACATGCATCAT+AGG | + | chr1_1:25015719-25015738 | Msa0015480:CDS | 35.0% | |
| ! | AGAACTGTTTTGTGTAGAGA+TGG | + | chr1_1:25015803-25015822 | Msa0015480:CDS | 35.0% |
| TCTGTGATACCAATGTTTCT+TGG | - | chr1_1:25015867-25015886 | Msa0015470:intron | 35.0% | |
| !!! | TGGTATCACAGACTTTTTTC+AGG | + | chr1_1:25015875-25015894 | Msa0015480:CDS | 35.0% |
| !! | AATGGCTATGTCGATTCATT+TGG | + | chr1_1:25015936-25015955 | Msa0015480:intron | 35.0% |
| !! | ATGGCTATGTCGATTCATTT+GGG | + | chr1_1:25015937-25015956 | Msa0015480:intron | 35.0% |
| AAGCAGTATTAGGTCATGTT+TGG | + | chr1_1:25015967-25015986 | Msa0015480:intron | 35.0% | |
| ! | CATAAGCATTTGAGATGGTT+TGG | - | chr1_1:25016159-25016178 | Msa0015470:intron | 35.0% |
| ACTGTCATAAGCATTTGAGA+TGG | - | chr1_1:25016164-25016183 | Msa0015470:intron | 35.0% | |
| AGAGTAATAGCATGTGAATC+AGG | + | chr1_1:25016418-25016437 | Msa0015480:intron | 35.0% | |
| !! | TTCTAAAGCTTCAGAACTTG+TGG | + | chr1_1:25016462-25016481 | Msa0015480:CDS | 35.0% |
| AACTTGTGGTTGGAAGTTAT+TGG | + | chr1_1:25016476-25016495 | Msa0015480:CDS | 35.0% | |
| CTTCATCACCTACAAATACA+TGG | - | chr1_1:25016714-25016733 | Msa0015470:intron | 35.0% | |
| TGATAAGATTCACTGCTTCT+TGG | - | chr1_1:25016739-25016758 | Msa0015470:intron | 35.0% | |
| AAGAAGCAGTGAATCTTATC+AGG | + | chr1_1:25016738-25016757 | Msa0015480:CDS | 35.0% | |
| GATATTGGCATCATCCATGA+TGG | - | chr1_1:25014883-25014902 | Msa0015470:intron | 40.0% | |
| TGGATGATGCCAATATCACA+TGG | + | chr1_1:25014886-25014905 | Msa0015480:CDS | 40.0% | |
| GTGGAGCATGATTGGATTAA+TGG | + | chr1_1:25014919-25014938 | Msa0015480:CDS | 40.0% | |
| GAGACAGAATTGTGGTACTT+AGG | + | chr1_1:25014997-25015016 | Msa0015480:CDS | 40.0% | |
| TGCTCTCTTGAGTGTTTCTT+TGG | - | chr1_1:25015660-25015679 | Msa0015470:intron | 40.0% | |
| AGTTCTGTAATCTCCGATGT+TGG | - | chr1_1:25015789-25015808 | Msa0015470:intron | 40.0% | |
| !! | ATGTCGATTCATTTGGGAGA+TGG | + | chr1_1:25015943-25015962 | Msa0015480:intron | 40.0% |
| ! | AGATGGTTTGGGAGAACTTA+TGG | - | chr1_1:25016147-25016166 | Msa0015470:intron | 40.0% |
| TGTGAATCAGGTAATGCAAC+AGG | + | chr1_1:25016430-25016449 | Msa0015480:intron | 40.0% | |
| AGGTAATGCAACAGGTACAA+AGG | + | chr1_1:25016438-25016457 | Msa0015480:intron | 40.0% | |
| AAAGCTTCAGAACTTGTGGT+TGG | + | chr1_1:25016466-25016485 | Msa0015480:CDS | 40.0% | |
| TTTGTGATCTTGGCAAGCAA+TGG | + | chr1_1:25016517-25016536 | Msa0015480:CDS | 40.0% | |
| TGAGTCTCCCATGTATTTGT+AGG | + | chr1_1:25016703-25016722 | Msa0015480:intron | 40.0% | |
| GAATCTTATCAGGCACATAG+AGG | + | chr1_1:25016748-25016767 | Msa0015480:CDS | 40.0% | |
| GATATTGGCATCATCCATGA+TGG | - | chr1_1:25014883-25014902 | Msa0015470:intron | 40.0% | |
| TGGATGATGCCAATATCACA+TGG | + | chr1_1:25014886-25014905 | Msa0015480:CDS | 40.0% | |
| GTGGAGCATGATTGGATTAA+TGG | + | chr1_1:25014919-25014938 | Msa0015480:CDS | 40.0% | |
| GAGACAGAATTGTGGTACTT+AGG | + | chr1_1:25014997-25015016 | Msa0015480:CDS | 40.0% | |
| TGCTCTCTTGAGTGTTTCTT+TGG | - | chr1_1:25015660-25015679 | Msa0015470:intron | 40.0% | |
| AGTTCTGTAATCTCCGATGT+TGG | - | chr1_1:25015789-25015808 | Msa0015470:intron | 40.0% | |
| !! | ATGTCGATTCATTTGGGAGA+TGG | + | chr1_1:25015943-25015962 | Msa0015480:intron | 40.0% |
| ! | AGATGGTTTGGGAGAACTTA+TGG | - | chr1_1:25016147-25016166 | Msa0015470:intron | 40.0% |
| TGTGAATCAGGTAATGCAAC+AGG | + | chr1_1:25016430-25016449 | Msa0015480:intron | 40.0% | |
| AGGTAATGCAACAGGTACAA+AGG | + | chr1_1:25016438-25016457 | Msa0015480:intron | 40.0% | |
| AAAGCTTCAGAACTTGTGGT+TGG | + | chr1_1:25016466-25016485 | Msa0015480:CDS | 40.0% | |
| TTTGTGATCTTGGCAAGCAA+TGG | + | chr1_1:25016517-25016536 | Msa0015480:CDS | 40.0% | |
| TGAGTCTCCCATGTATTTGT+AGG | + | chr1_1:25016703-25016722 | Msa0015480:intron | 40.0% | |
| GAATCTTATCAGGCACATAG+AGG | + | chr1_1:25016748-25016767 | Msa0015480:CDS | 40.0% | |
| !! | ATTGACTTGCACAGGCACTT+CGG | + | chr1_1:25014797-25014816 | Msa0015480:intron | 45.0% |
| CGGGTGAAACTCTCATGTTT+AGG | + | chr1_1:25014817-25014836 | Msa0015480:CDS | 45.0% | |
| ATCACATGGTCATCATGTGG+TGG | + | chr1_1:25014900-25014919 | Msa0015480:CDS | 45.0% | |
| ! | ATCATGTGGTGGAGCATGAT+TGG | + | chr1_1:25014911-25014930 | Msa0015480:CDS | 45.0% |
| ! | ACACTCAAGAGAGCATACCT+AGG | + | chr1_1:25015665-25015684 | Msa0015480:CDS | 45.0% |
| AAACTCGTGCTAGCCAACAT+CGG | + | chr1_1:25015773-25015792 | Msa0015480:CDS | 45.0% | |
| GGCGTAGCTTATCAGACAAT+TGG | + | chr1_1:25015824-25015843 | Msa0015480:CDS | 45.0% | |
| GGGAGATGGAAAGCAGTATT+AGG | + | chr1_1:25015957-25015976 | Msa0015480:intron | 45.0% | |
| TCTTGGCAAGCAATGGCATA+TGG | + | chr1_1:25016524-25016543 | Msa0015480:CDS | 45.0% | |
| CTTGGCAAGCAATGGCATAT+GGG | + | chr1_1:25016525-25016544 | Msa0015480:CDS | 45.0% | |
| ! | AAACACTCTGCTGCTTCTTG+TGG | - | chr1_1:25016776-25016795 | Msa0015470:intron | 45.0% |
| ! | ACAAGAAGCAGCAGAGTGTT+TGG | + | chr1_1:25016775-25016794 | Msa0015480:CDS | 45.0% |
| ! | GTGTTTGGCTAAGGAAGCAT+TGG | + | chr1_1:25016790-25016809 | Msa0015480:CDS | 45.0% |
| !! | TGGCTAAGGAAGCATTGGTT+AGG | + | chr1_1:25016795-25016814 | Msa0015480:CDS | 45.0% |
| !! | ATTGACTTGCACAGGCACTT+CGG | + | chr1_1:25014797-25014816 | Msa0015480:intron | 45.0% |
| CGGGTGAAACTCTCATGTTT+AGG | + | chr1_1:25014817-25014836 | Msa0015480:CDS | 45.0% | |
| ATCACATGGTCATCATGTGG+TGG | + | chr1_1:25014900-25014919 | Msa0015480:CDS | 45.0% | |
| ! | ATCATGTGGTGGAGCATGAT+TGG | + | chr1_1:25014911-25014930 | Msa0015480:CDS | 45.0% |
| ! | ACACTCAAGAGAGCATACCT+AGG | + | chr1_1:25015665-25015684 | Msa0015480:CDS | 45.0% |
| AAACTCGTGCTAGCCAACAT+CGG | + | chr1_1:25015773-25015792 | Msa0015480:CDS | 45.0% | |
| GGCGTAGCTTATCAGACAAT+TGG | + | chr1_1:25015824-25015843 | Msa0015480:CDS | 45.0% | |
| GGGAGATGGAAAGCAGTATT+AGG | + | chr1_1:25015957-25015976 | Msa0015480:intron | 45.0% | |
| TCTTGGCAAGCAATGGCATA+TGG | + | chr1_1:25016524-25016543 | Msa0015480:CDS | 45.0% | |
| CTTGGCAAGCAATGGCATAT+GGG | + | chr1_1:25016525-25016544 | Msa0015480:CDS | 45.0% | |
| ! | AAACACTCTGCTGCTTCTTG+TGG | - | chr1_1:25016776-25016795 | Msa0015470:intron | 45.0% |
| ! | ACAAGAAGCAGCAGAGTGTT+TGG | + | chr1_1:25016775-25016794 | Msa0015480:CDS | 45.0% |
| ! | GTGTTTGGCTAAGGAAGCAT+TGG | + | chr1_1:25016790-25016809 | Msa0015480:CDS | 45.0% |
| !! | TGGCTAAGGAAGCATTGGTT+AGG | + | chr1_1:25016795-25016814 | Msa0015480:CDS | 45.0% |
| !!! | GTTTTTTTTAAAAAATAAAT+AGG | + | chr1_1:25016660-25016679 | Msa0015480:intron | 5.0% |
| !!! | GTTTTTTTTAAAAAATAAAT+AGG | + | chr1_1:25016660-25016679 | Msa0015480:intron | 5.0% |
| !! | TTGACTTGCACAGGCACTTC+GGG | + | chr1_1:25014798-25014817 | Msa0015480:intron | 50.0% |
| GAGTTGGAAGCAAGCCATCA+TGG | + | chr1_1:25014866-25014885 | Msa0015480:CDS | 50.0% | |
| ! | AGCAGCAGAGTGTTTGGCTA+AGG | + | chr1_1:25016781-25016800 | Msa0015480:CDS | 50.0% |
| !! | TTGACTTGCACAGGCACTTC+GGG | + | chr1_1:25014798-25014817 | Msa0015480:intron | 50.0% |
| GAGTTGGAAGCAAGCCATCA+TGG | + | chr1_1:25014866-25014885 | Msa0015480:CDS | 50.0% | |
| ! | AGCAGCAGAGTGTTTGGCTA+AGG | + | chr1_1:25016781-25016800 | Msa0015480:CDS | 50.0% |
| GAGCTTGGGAGACTCTCGAA+TGG | + | chr1_1:25015171-25015190 | Msa0015480:intron | 55.0% | |
| GGCAAGCAATGGCATATGGG+AGG | + | chr1_1:25016528-25016547 | Msa0015480:CDS | 55.0% | |
| GAGCTTGGGAGACTCTCGAA+TGG | + | chr1_1:25015171-25015190 | Msa0015480:intron | 55.0% | |
| GGCAAGCAATGGCATATGGG+AGG | + | chr1_1:25016528-25016547 | Msa0015480:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 25014606 | 25016862 | 25014606 | ID=Msa0015480;Name=Msa0015480 |
| chr1_1 | mRNA | 25014606 | 25016862 | 25014606 | ID=Msa0015480-mRNA-1;Parent=Msa0015480;Name=Msa0015480-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.5|0.2|1|1|1|5|0|274 |
| chr1_1 | exon | 25014606 | 25014638 | 25014606 | ID=Msa0015480-mRNA-1:exon:8608;Parent=Msa0015480-mRNA-1 |
| chr1_1 | exon | 25014811 | 25015095 | 25014811 | ID=Msa0015480-mRNA-1:exon:8609;Parent=Msa0015480-mRNA-1 |
| chr1_1 | exon | 25015638 | 25015896 | 25015638 | ID=Msa0015480-mRNA-1:exon:8610;Parent=Msa0015480-mRNA-1 |
| chr1_1 | exon | 25016440 | 25016549 | 25016440 | ID=Msa0015480-mRNA-1:exon:8611;Parent=Msa0015480-mRNA-1 |
| chr1_1 | exon | 25016725 | 25016862 | 25016725 | ID=Msa0015480-mRNA-1:exon:8612;Parent=Msa0015480-mRNA-1 |
| chr1_1 | CDS | 25014606 | 25014638 | 25014606 | ID=Msa0015480-mRNA-1:cds;Parent=Msa0015480-mRNA-1 |
| chr1_1 | CDS | 25014811 | 25015095 | 25014811 | ID=Msa0015480-mRNA-1:cds;Parent=Msa0015480-mRNA-1 |
| chr1_1 | CDS | 25015638 | 25015896 | 25015638 | ID=Msa0015480-mRNA-1:cds;Parent=Msa0015480-mRNA-1 |
| chr1_1 | CDS | 25016440 | 25016549 | 25016440 | ID=Msa0015480-mRNA-1:cds;Parent=Msa0015480-mRNA-1 |
| chr1_1 | CDS | 25016725 | 25016862 | 25016725 | ID=Msa0015480-mRNA-1:cds;Parent=Msa0015480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
