Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713680 | XP_039690368.1 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713680 | sp|Q058P4|PUB30_ARATH | 74.058 | 451 | 114 | 1 | 1 | 451 | 1 | 448 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713680 | G7K2F8 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0713680 | 0.801245 | 9.861253e-49 | -8.615850e-47 |
| Msa0002680 | Msa0713680 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0012940 | Msa0713680 | 0.824574 | 7.497930e-54 | -8.615850e-47 |
| Msa0022750 | Msa0713680 | -0.803906 | 2.787000e-49 | -8.615850e-47 |
| Msa0035120 | Msa0713680 | 0.830487 | 2.856092e-55 | -8.615850e-47 |
| Msa0035130 | Msa0713680 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0039250 | Msa0713680 | 0.822179 | 2.720980e-53 | -8.615850e-47 |
| Msa0041690 | Msa0713680 | 0.813099 | 3.037963e-51 | -8.615850e-47 |
| Msa0043500 | Msa0713680 | 0.801933 | 7.127291e-49 | -8.615850e-47 |
| Msa0043650 | Msa0713680 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0045340 | Msa0713680 | 0.810837 | 9.448656e-51 | -8.615850e-47 |
| Msa0047640 | Msa0713680 | 0.828913 | 6.901905e-55 | -8.615850e-47 |
| Msa0049790 | Msa0713680 | 0.800021 | 1.751999e-48 | -8.615850e-47 |
| Msa0052870 | Msa0713680 | 0.805043 | 1.615250e-49 | -8.615850e-47 |
| Msa0054820 | Msa0713680 | 0.821225 | 4.520954e-53 | -8.615850e-47 |
| Msa0089980 | Msa0713680 | 0.841325 | 5.089226e-58 | -8.615850e-47 |
| Msa0090010 | Msa0713680 | 0.841424 | 4.791397e-58 | -8.615850e-47 |
| Msa0093850 | Msa0713680 | 0.839996 | 1.134169e-57 | -8.615850e-47 |
| Msa0098470 | Msa0713680 | 0.812807 | 3.520572e-51 | -8.615850e-47 |
| Msa0100160 | Msa0713680 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0101240 | Msa0713680 | 0.808673 | 2.759155e-50 | -8.615850e-47 |
| Msa0106620 | Msa0713680 | 0.858572 | 7.514871e-63 | -8.615850e-47 |
| Msa0106710 | Msa0713680 | 0.835237 | 1.886555e-56 | -8.615850e-47 |
| Msa0108390 | Msa0713680 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa0108410 | Msa0713680 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0112270 | Msa0713680 | 0.807161 | 5.787552e-50 | -8.615850e-47 |
| Msa0116790 | Msa0713680 | 0.812685 | 3.744242e-51 | -8.615850e-47 |
| Msa0614000 | Msa0713680 | 0.808307 | 3.302789e-50 | -8.615850e-47 |
| Msa0619420 | Msa0713680 | 0.847335 | 1.234440e-59 | -8.615850e-47 |
| Msa0624900 | Msa0713680 | 0.803229 | 3.852103e-49 | -8.615850e-47 |
| Msa0626270 | Msa0713680 | 0.841816 | 3.777332e-58 | -8.615850e-47 |
| Msa0626460 | Msa0713680 | 0.858122 | 1.022955e-62 | -8.615850e-47 |
| Msa0628420 | Msa0713680 | 0.813938 | 1.986636e-51 | -8.615850e-47 |
| Msa0630940 | Msa0713680 | 0.862768 | 4.009678e-64 | -8.615850e-47 |
| Msa0638360 | Msa0713680 | 0.801751 | 7.765459e-49 | -8.615850e-47 |
| Msa0638480 | Msa0713680 | 0.819174 | 1.334188e-52 | -8.615850e-47 |
| Msa0644030 | Msa0713680 | 0.816608 | 5.065954e-52 | -8.615850e-47 |
| Msa0652690 | Msa0713680 | 0.811228 | 7.777367e-51 | -8.615850e-47 |
| Msa0655920 | Msa0713680 | 0.809837 | 1.553384e-50 | -8.615850e-47 |
| Msa0658590 | Msa0713680 | 0.811330 | 7.389950e-51 | -8.615850e-47 |
| Msa0659550 | Msa0713680 | 0.825332 | 4.966674e-54 | -8.615850e-47 |
| Msa0663270 | Msa0713680 | 0.835254 | 1.867657e-56 | -8.615850e-47 |
| Msa0664090 | Msa0713680 | 0.822619 | 2.150318e-53 | -8.615850e-47 |
| Msa0664540 | Msa0713680 | 0.868524 | 6.124906e-66 | -8.615850e-47 |
| Msa0669180 | Msa0713680 | 0.862392 | 5.236478e-64 | -8.615850e-47 |
| Msa0689760 | Msa0713680 | 0.834505 | 2.883587e-56 | -8.615850e-47 |
| Msa0692880 | Msa0713680 | 0.846802 | 1.727385e-59 | -8.615850e-47 |
| Msa0693330 | Msa0713680 | 0.826155 | 3.167175e-54 | -8.615850e-47 |
| Msa0695270 | Msa0713680 | 0.816077 | 6.660193e-52 | -8.615850e-47 |
| Msa0696850 | Msa0713680 | 0.808386 | 3.176854e-50 | -8.615850e-47 |
| Msa0698100 | Msa0713680 | 0.809212 | 2.115149e-50 | -8.615850e-47 |
| Msa0701360 | Msa0713680 | 0.806036 | 9.997267e-50 | -8.615850e-47 |
| Msa0702720 | Msa0713680 | 0.822969 | 1.781775e-53 | -8.615850e-47 |
| Msa0713680 | Msa0713870 | 0.806010 | 1.012514e-49 | -8.615850e-47 |
| Msa0713680 | Msa0715060 | 0.821170 | 4.654486e-53 | -8.615850e-47 |
| Msa0713680 | Msa0715420 | 0.802426 | 5.642400e-49 | -8.615850e-47 |
| Msa0713680 | Msa0716860 | 0.832429 | 9.500188e-56 | -8.615850e-47 |
| Msa0713680 | Msa0721020 | 0.810097 | 1.365651e-50 | -8.615850e-47 |
| Msa0713680 | Msa0738240 | 0.807699 | 4.450127e-50 | -8.615850e-47 |
| Msa0713680 | Msa0750250 | 0.816072 | 6.675754e-52 | -8.615850e-47 |
| Msa0713680 | Msa0757800 | 0.841871 | 3.652170e-58 | -8.615850e-47 |
| Msa0713680 | Msa0789560 | 0.802255 | 6.118074e-49 | -8.615850e-47 |
| Msa0713680 | Msa0797660 | 0.921017 | 6.130884e-88 | -8.615850e-47 |
| Msa0713680 | Msa0804250 | 0.818084 | 2.357267e-52 | -8.615850e-47 |
| Msa0713680 | Msa0835970 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0713680 | Msa0861510 | 0.810590 | 1.068583e-50 | -8.615850e-47 |
| Msa0713680 | Msa0861600 | 0.810804 | 9.605306e-51 | -8.615850e-47 |
| Msa0713680 | Msa0868440 | 0.801603 | 8.330223e-49 | -8.615850e-47 |
| Msa0713680 | Msa0871720 | 0.804823 | 1.795606e-49 | -8.615850e-47 |
| Msa0713680 | Msa0881350 | 0.808471 | 3.047853e-50 | -8.615850e-47 |
| Msa0713680 | Msa0903780 | 0.849287 | 3.563088e-60 | -8.615850e-47 |
| Msa0713680 | Msa0933760 | 0.805881 | 1.077676e-49 | -8.615850e-47 |
| Msa0713680 | Msa0934140 | 0.827970 | 1.165465e-54 | -8.615850e-47 |
| Msa0713680 | Msa0937020 | 0.810332 | 1.214898e-50 | -8.615850e-47 |
| Msa0713680 | Msa0937430 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0713680 | Msa0944660 | 0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0713680 | Msa0945240 | 0.815453 | 9.175377e-52 | -8.615850e-47 |
| Msa0713680 | Msa0971650 | 0.821020 | 5.039930e-53 | -8.615850e-47 |
| Msa0713680 | Msa1002960 | 0.801919 | 7.174156e-49 | -8.615850e-47 |
| Msa0713680 | Msa1010070 | 0.805932 | 1.051178e-49 | -8.615850e-47 |
| Msa0713680 | Msa1028280 | 0.832194 | 1.086522e-55 | -8.615850e-47 |
| Msa0713680 | Msa1034500 | 0.836869 | 7.267192e-57 | -8.615850e-47 |
| Msa0713680 | Msa1043330 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0713680 | Msa1044470 | 0.804735 | 1.872870e-49 | -8.615850e-47 |
| Msa0713680 | Msa1050910 | 0.802272 | 6.070850e-49 | -8.615850e-47 |
| Msa0713680 | Msa1072600 | 0.846652 | 1.898254e-59 | -8.615850e-47 |
| Msa0713680 | Msa1076560 | 0.827580 | 1.446130e-54 | -8.615850e-47 |
| Msa0713680 | Msa1085330 | 0.812154 | 4.889382e-51 | -8.615850e-47 |
| Msa0713680 | Msa1088410 | 0.819624 | 1.053296e-52 | -8.615850e-47 |
| Msa0713680 | Msa1089450 | 0.832359 | 9.890140e-56 | -8.615850e-47 |
| Msa0713680 | Msa1111380 | 0.800869 | 1.177379e-48 | -8.615850e-47 |
| Msa0713680 | Msa1117840 | 0.801113 | 1.049507e-48 | -8.615850e-47 |
| Msa0713680 | Msa1123350 | 0.823988 | 1.029410e-53 | -8.615850e-47 |
| Msa0713680 | Msa1127540 | 0.806753 | 7.057585e-50 | -8.615850e-47 |
| Msa0713680 | Msa1127590 | 0.847773 | 9.352075e-60 | -8.615850e-47 |
| Msa0713680 | Msa1129690 | 0.801488 | 8.792256e-49 | -8.615850e-47 |
| Msa0713680 | Msa1145810 | 0.816262 | 6.056026e-52 | -8.615850e-47 |
| Msa0713680 | Msa1155170 | -0.803016 | 4.262806e-49 | -8.615850e-47 |
| Msa0713680 | Msa1157570 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0713680 | Msa1165090 | 0.805715 | 1.167725e-49 | -8.615850e-47 |
| Msa0713680 | Msa1169720 | 0.808078 | 3.696187e-50 | -8.615850e-47 |
| Msa0713680 | Msa1204100 | -0.810109 | 1.357145e-50 | -8.615850e-47 |
| Msa0713680 | Msa1206650 | 0.803871 | 2.834420e-49 | -8.615850e-47 |
| Msa0713680 | Msa1208160 | 0.802559 | 5.296153e-49 | -8.615850e-47 |
| Msa0713680 | Msa1208430 | 0.813868 | 2.058502e-51 | -8.615850e-47 |
| Msa0713680 | Msa1213810 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0713680 | Msa1214320 | 0.820221 | 7.690206e-53 | -8.615850e-47 |
| Msa0713680 | Msa1219000 | 0.828428 | 9.041335e-55 | -8.615850e-47 |
| Msa0713680 | Msa1225860 | -0.828498 | 8.692794e-55 | -8.615850e-47 |
| Msa0713680 | Msa1226470 | 0.802112 | 6.548010e-49 | -8.615850e-47 |
| Msa0713680 | Msa1234550 | 0.820204 | 7.762072e-53 | -8.615850e-47 |
| Msa0713680 | Msa1254620 | 0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0713680 | Msa1265590 | 0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0713680 | Msa1277080 | 0.840840 | 6.823808e-58 | -8.615850e-47 |
| Msa0713680 | Msa1298370 | 0.810083 | 1.375005e-50 | -8.615850e-47 |
| Msa0713680 | Msa1317950 | 0.803518 | 3.355141e-49 | -8.615850e-47 |
| Msa0713680 | Msa1317960 | 0.810831 | 9.480292e-51 | -8.615850e-47 |
| Msa0713680 | Msa1320670 | 0.800217 | 1.598501e-48 | -8.615850e-47 |
| Msa0713680 | Msa1328640 | 0.824679 | 7.084648e-54 | -8.615850e-47 |
| Msa0713680 | Msa1329050 | -0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa0713680 | Msa1332760 | 0.811860 | 5.666015e-51 | -8.615850e-47 |
| Msa0713680 | Msa1335160 | 0.839494 | 1.532754e-57 | -8.615850e-47 |
| Msa0713680 | Msa1340200 | 0.802541 | 5.341603e-49 | -8.615850e-47 |
| Msa0713680 | Msa1341840 | 0.816107 | 6.558586e-52 | -8.615850e-47 |
| Msa0713680 | Msa1345810 | 0.800232 | 1.587053e-48 | -8.615850e-47 |
| Msa0713680 | Msa1348090 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0713680 | Msa1359560 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
| Msa0713680 | Msa1360420 | 0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0713680 | Msa1366550 | 0.825176 | 5.406443e-54 | -8.615850e-47 |
| Msa0713680 | Msa1369150 | 0.800722 | 1.261068e-48 | -8.615850e-47 |
| Msa0713680 | Msa1369690 | 0.832533 | 8.956454e-56 | -8.615850e-47 |
| Msa0713680 | Msa1371520 | 0.839010 | 2.046090e-57 | -8.615850e-47 |
| Msa0713680 | Msa1373820 | 0.826512 | 2.604346e-54 | -8.615850e-47 |
| Msa0713680 | Msa1383530 | 0.805239 | 1.469149e-49 | -8.615850e-47 |
| Msa0713680 | Msa1393820 | 0.848178 | 7.234546e-60 | -8.615850e-47 |
| Msa0713680 | Msa1410420 | 0.803839 | 2.878726e-49 | -8.615850e-47 |
| Msa0713680 | Msa1411500 | 0.832133 | 1.124580e-55 | -8.615850e-47 |
| Msa0713680 | Msa1411950 | 0.817969 | 2.502156e-52 | -8.615850e-47 |
| Msa0713680 | Msa1418240 | 0.842684 | 2.225241e-58 | -8.615850e-47 |
| Msa0713680 | Msa1420250 | 0.833114 | 6.420909e-56 | -8.615850e-47 |
| Msa0713680 | Msa1434740 | 0.802929 | 4.443328e-49 | -8.615850e-47 |
| Msa0713680 | Msa1438520 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0713680 | Msa1440310 | 0.804404 | 2.195891e-49 | -8.615850e-47 |
| Msa0713680 | Msa1446780 | 0.811627 | 6.369803e-51 | -8.615850e-47 |
| Msa0713680 | Msa1447180 | 0.815646 | 8.310748e-52 | -8.615850e-47 |
| Msa0713680 | Msa1450720 | 0.810624 | 1.050653e-50 | -8.615850e-47 |
| Msa0713680 | Msa1453360 | 0.801374 | 9.281797e-49 | -8.615850e-47 |
| Msa0713680 | Msa1454530 | 0.807749 | 4.341014e-50 | -8.615850e-47 |
| Msa0713680 | Msa1461370 | 0.813628 | 2.324675e-51 | -8.615850e-47 |
| Msa0713680 | Msa1461540 | 0.853872 | 1.792381e-61 | -8.615850e-47 |
| Msa0713680 | Msa1463010 | 0.807814 | 4.205156e-50 | -8.615850e-47 |
| Msa0713680 | Msa1463030 | 0.836995 | 6.748524e-57 | -8.615850e-47 |
| Msa0130110 | Msa0713680 | 0.821302 | 4.340231e-53 | -8.615850e-47 |
| Msa0133720 | Msa0713680 | 0.818662 | 1.743556e-52 | -8.615850e-47 |
| Msa0133820 | Msa0713680 | 0.808005 | 3.830756e-50 | -8.615850e-47 |
| Msa0138360 | Msa0713680 | 0.845913 | 3.018466e-59 | -8.615850e-47 |
| Msa0138750 | Msa0713680 | 0.808603 | 2.856025e-50 | -8.615850e-47 |
| Msa0141400 | Msa0713680 | 0.815938 | 7.153059e-52 | -8.615850e-47 |
| Msa0142460 | Msa0713680 | 0.808177 | 3.520819e-50 | -8.615850e-47 |
| Msa0144360 | Msa0713680 | 0.821070 | 4.908279e-53 | -8.615850e-47 |
| Msa0146080 | Msa0713680 | 0.800042 | 1.734766e-48 | -8.615850e-47 |
| Msa0147980 | Msa0713680 | 0.822209 | 2.677604e-53 | -8.615850e-47 |
| Msa0168870 | Msa0713680 | 0.824384 | 8.311812e-54 | -8.615850e-47 |
| Msa0175930 | Msa0713680 | 0.805017 | 1.635164e-49 | -8.615850e-47 |
| Msa0181230 | Msa0713680 | 0.817785 | 2.753688e-52 | -8.615850e-47 |
| Msa0183760 | Msa0713680 | 0.822734 | 2.021668e-53 | -8.615850e-47 |
| Msa0207350 | Msa0713680 | 0.804916 | 1.716707e-49 | -8.615850e-47 |
| Msa0209140 | Msa0713680 | 0.810231 | 1.277286e-50 | -8.615850e-47 |
| Msa0220730 | Msa0713680 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
| Msa0225480 | Msa0713680 | 0.835376 | 1.739254e-56 | -8.615850e-47 |
| Msa0225860 | Msa0713680 | 0.802055 | 6.726437e-49 | -8.615850e-47 |
| Msa0230150 | Msa0713680 | 0.800185 | 1.622871e-48 | -8.615850e-47 |
| Msa0230370 | Msa0713680 | 0.813713 | 2.227059e-51 | -8.615850e-47 |
| Msa0231190 | Msa0713680 | 0.828580 | 8.305891e-55 | -8.615850e-47 |
| Msa0237210 | Msa0713680 | 0.809821 | 1.565743e-50 | -8.615850e-47 |
| Msa0372810 | Msa0713680 | 0.806936 | 6.456078e-50 | -8.615850e-47 |
| Msa0378970 | Msa0713680 | 0.818602 | 1.799609e-52 | -8.615850e-47 |
| Msa0382370 | Msa0713680 | 0.830800 | 2.395265e-55 | -8.615850e-47 |
| Msa0388990 | Msa0713680 | 0.806040 | 9.977815e-50 | -8.615850e-47 |
| Msa0428580 | Msa0713680 | 0.807100 | 5.959961e-50 | -8.615850e-47 |
| Msa0430750 | Msa0713680 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa0432160 | Msa0713680 | 0.835427 | 1.689009e-56 | -8.615850e-47 |
| Msa0432170 | Msa0713680 | 0.804677 | 1.925795e-49 | -8.615850e-47 |
| Msa0435370 | Msa0713680 | 0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0435420 | Msa0713680 | 0.808050 | 3.746733e-50 | -8.615850e-47 |
| Msa0435570 | Msa0713680 | 0.804476 | 2.121519e-49 | -8.615850e-47 |
| Msa0450400 | Msa0713680 | -0.841551 | 4.435605e-58 | -8.615850e-47 |
| Msa0468250 | Msa0713680 | 0.800709 | 1.269303e-48 | -8.615850e-47 |
| Msa0474940 | Msa0713680 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa0476680 | Msa0713680 | 0.837208 | 5.953875e-57 | -8.615850e-47 |
| Msa0480780 | Msa0713680 | 0.815354 | 9.653231e-52 | -8.615850e-47 |
| Msa0481970 | Msa0713680 | 0.816327 | 5.854372e-52 | -8.615850e-47 |
| Msa0240900 | Msa0713680 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0241830 | Msa0713680 | 0.843182 | 1.639323e-58 | -8.615850e-47 |
| Msa0261170 | Msa0713680 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0270210 | Msa0713680 | 0.806858 | 6.704987e-50 | -8.615850e-47 |
| Msa0274980 | Msa0713680 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0279850 | Msa0713680 | 0.846462 | 2.139303e-59 | -8.615850e-47 |
| Msa0300320 | Msa0713680 | 0.814520 | 1.477744e-51 | -8.615850e-47 |
| Msa0307850 | Msa0713680 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0312530 | Msa0713680 | 0.809325 | 2.001027e-50 | -8.615850e-47 |
| Msa0315690 | Msa0713680 | 0.812944 | 3.285100e-51 | -8.615850e-47 |
| Msa0317970 | Msa0713680 | 0.819876 | 9.224028e-53 | -8.615850e-47 |
| Msa0322900 | Msa0713680 | 0.869234 | 3.606136e-66 | -8.615850e-47 |
| Msa0323260 | Msa0713680 | 0.819626 | 1.052393e-52 | -8.615850e-47 |
| Msa0328460 | Msa0713680 | 0.827109 | 1.875447e-54 | -8.615850e-47 |
| Msa0341690 | Msa0713680 | 0.837621 | 4.666344e-57 | -8.615850e-47 |
| Msa0358400 | Msa0713680 | 0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0485240 | Msa0713680 | 0.838033 | 3.657467e-57 | -8.615850e-47 |
| Msa0513370 | Msa0713680 | 0.815709 | 8.046542e-52 | -8.615850e-47 |
| Msa0518030 | Msa0713680 | 0.841662 | 4.146985e-58 | -8.615850e-47 |
| Msa0521010 | Msa0713680 | 0.836797 | 7.580264e-57 | -8.615850e-47 |
| Msa0527190 | Msa0713680 | 0.838793 | 2.327997e-57 | -8.615850e-47 |
| Msa0527820 | Msa0713680 | 0.825894 | 3.654117e-54 | -8.615850e-47 |
| Msa0531250 | Msa0713680 | 0.821861 | 3.223277e-53 | -8.615850e-47 |
| Msa0534400 | Msa0713680 | 0.864005 | 1.659301e-64 | -8.615850e-47 |
| Msa0544730 | Msa0713680 | 0.818050 | 2.399368e-52 | -8.615850e-47 |
| Msa0547990 | Msa0713680 | 0.832797 | 7.700258e-56 | -8.615850e-47 |
| Msa0556010 | Msa0713680 | 0.848835 | 4.757767e-60 | -8.615850e-47 |
| Msa0572750 | Msa0713680 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0576680 | Msa0713680 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0581690 | Msa0713680 | 0.823851 | 1.108614e-53 | -8.615850e-47 |
| Msa0582480 | Msa0713680 | 0.832945 | 7.073890e-56 | -8.615850e-47 |
| Msa0583360 | Msa0713680 | -0.829893 | 3.989966e-55 | -8.615850e-47 |
| Msa0583500 | Msa0713680 | 0.833792 | 4.350863e-56 | -8.615850e-47 |
| Msa0586220 | Msa0713680 | 0.835039 | 2.115754e-56 | -8.615850e-47 |
| Msa0588090 | Msa0713680 | 0.804158 | 2.470335e-49 | -8.615850e-47 |
| Msa0590640 | Msa0713680 | 0.863451 | 2.466502e-64 | -8.615850e-47 |
| Msa0597770 | Msa0713680 | 0.859535 | 3.866518e-63 | -8.615850e-47 |
| Msa0601950 | Msa0713680 | 0.819065 | 1.412550e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713680 | MtrunA17_Chr5g0400971 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 909 |
| Msa0713680 | MtrunA17_Chr1g0152291 | 62.899 | 407 | 145 | 4 | 51 | 451 | 28 | 434 | 3.88e-175 | 497 |
| Msa0713680 | MtrunA17_Chr8g0384041 | 30.653 | 398 | 248 | 10 | 63 | 434 | 5 | 400 | 3.03e-39 | 146 |
| Msa0713680 | MtrunA17_Chr4g0044631 | 28.535 | 389 | 264 | 9 | 55 | 430 | 1 | 388 | 3.56e-35 | 135 |
| Msa0713680 | MtrunA17_Chr3g0129811 | 29.383 | 405 | 254 | 8 | 58 | 434 | 71 | 471 | 8.92e-35 | 135 |
| Msa0713680 | MtrunA17_Chr5g0434171 | 29.925 | 401 | 226 | 11 | 67 | 430 | 35 | 417 | 2.07e-33 | 130 |
| Msa0713680 | MtrunA17_Chr6g0479261 | 28.784 | 403 | 236 | 10 | 67 | 430 | 25 | 415 | 6.61e-33 | 129 |
| Msa0713680 | MtrunA17_Chr5g0420471 | 29.529 | 403 | 233 | 11 | 67 | 430 | 25 | 415 | 2.56e-32 | 127 |
| Msa0713680 | MtrunA17_Chr7g0267501 | 27.500 | 400 | 263 | 8 | 66 | 438 | 7 | 406 | 3.39e-31 | 124 |
| Msa0713680 | MtrunA17_Chr1g0199321 | 27.193 | 342 | 218 | 6 | 67 | 388 | 247 | 577 | 4.55e-30 | 123 |
| Msa0713680 | MtrunA17_Chr2g0322021 | 28.389 | 391 | 258 | 9 | 66 | 438 | 5 | 391 | 3.07e-29 | 118 |
| Msa0713680 | MtrunA17_Chr4g0031431 | 27.049 | 366 | 245 | 7 | 67 | 417 | 255 | 613 | 6.90e-29 | 119 |
| Msa0713680 | MtrunA17_Chr3g0110121 | 26.615 | 387 | 256 | 7 | 67 | 430 | 36 | 417 | 8.27e-28 | 114 |
| Msa0713680 | MtrunA17_Chr7g0237931 | 27.177 | 379 | 250 | 11 | 67 | 430 | 237 | 604 | 3.68e-26 | 111 |
| Msa0713680 | MtrunA17_Chr4g0044411 | 27.195 | 353 | 228 | 11 | 67 | 399 | 273 | 616 | 1.20e-25 | 110 |
| Msa0713680 | MtrunA17_Chr7g0248251 | 25.916 | 382 | 240 | 8 | 67 | 425 | 274 | 635 | 1.31e-24 | 107 |
| Msa0713680 | MtrunA17_Chr1g0177261 | 25.659 | 417 | 266 | 9 | 66 | 438 | 6 | 422 | 1.28e-23 | 102 |
| Msa0713680 | MtrunA17_Chr1g0177281 | 25.659 | 417 | 266 | 9 | 66 | 438 | 6 | 422 | 1.56e-23 | 102 |
| Msa0713680 | MtrunA17_Chr1g0177301 | 26.667 | 405 | 233 | 14 | 66 | 429 | 5 | 386 | 2.35e-23 | 101 |
| Msa0713680 | MtrunA17_Chr1g0177271 | 25.420 | 417 | 267 | 9 | 66 | 438 | 6 | 422 | 9.70e-23 | 100 |
| Msa0713680 | MtrunA17_Chr5g0437411 | 25.000 | 356 | 227 | 6 | 67 | 389 | 293 | 641 | 4.79e-21 | 96.3 |
| Msa0713680 | MtrunA17_Chr4g0025501 | 23.040 | 421 | 271 | 12 | 66 | 448 | 5 | 410 | 7.05e-21 | 94.4 |
| Msa0713680 | MtrunA17_Chr4g0059201 | 27.273 | 363 | 232 | 12 | 52 | 388 | 303 | 659 | 3.62e-20 | 93.6 |
| Msa0713680 | MtrunA17_Chr7g0275081 | 26.590 | 346 | 213 | 10 | 68 | 388 | 79 | 408 | 9.83e-20 | 91.3 |
| Msa0713680 | MtrunA17_Chr2g0284461 | 25.887 | 282 | 186 | 5 | 67 | 327 | 292 | 571 | 9.67e-19 | 89.0 |
| Msa0713680 | MtrunA17_Chr7g0234671 | 25.588 | 340 | 223 | 11 | 68 | 388 | 79 | 407 | 4.91e-18 | 86.3 |
| Msa0713680 | MtrunA17_Chr5g0413681 | 27.893 | 337 | 211 | 10 | 38 | 351 | 255 | 582 | 1.22e-17 | 85.5 |
| Msa0713680 | MtrunA17_Chr2g0280671 | 25.455 | 275 | 188 | 5 | 73 | 337 | 21 | 288 | 1.13e-16 | 81.6 |
| Msa0713680 | MtrunA17_Chr1g0189811 | 26.766 | 269 | 177 | 8 | 67 | 320 | 63 | 326 | 5.90e-16 | 79.7 |
| Msa0713680 | MtrunA17_Chr3g0122721 | 50.000 | 72 | 36 | 0 | 68 | 139 | 281 | 352 | 6.76e-16 | 80.5 |
| Msa0713680 | MtrunA17_Chr4g0013091 | 25.292 | 257 | 158 | 7 | 60 | 287 | 307 | 558 | 4.02e-15 | 77.8 |
| Msa0713680 | MtrunA17_Chr3g0117851 | 26.809 | 235 | 156 | 5 | 68 | 286 | 276 | 510 | 2.08e-14 | 75.5 |
| Msa0713680 | MtrunA17_Chr1g0183781 | 48.485 | 66 | 34 | 0 | 68 | 133 | 242 | 307 | 4.01e-14 | 74.7 |
| Msa0713680 | MtrunA17_Chr3g0106931 | 44.578 | 83 | 46 | 0 | 51 | 133 | 217 | 299 | 4.68e-14 | 74.7 |
| Msa0713680 | MtrunA17_Chr4g0048811 | 30.000 | 190 | 114 | 7 | 66 | 246 | 4 | 183 | 6.80e-14 | 72.4 |
| Msa0713680 | MtrunA17_Chr8g0373031 | 46.970 | 66 | 35 | 0 | 68 | 133 | 276 | 341 | 3.63e-13 | 71.6 |
| Msa0713680 | MtrunA17_Chr7g0261371 | 46.269 | 67 | 36 | 0 | 67 | 133 | 241 | 307 | 4.89e-13 | 71.2 |
| Msa0713680 | MtrunA17_Chr1g0198984 | 53.704 | 54 | 25 | 0 | 80 | 133 | 1 | 54 | 9.35e-13 | 64.7 |
| Msa0713680 | MtrunA17_Chr8g0377151 | 45.714 | 70 | 38 | 0 | 68 | 137 | 283 | 352 | 2.17e-12 | 69.3 |
| Msa0713680 | MtrunA17_Chr8g0390311 | 47.761 | 67 | 34 | 1 | 68 | 133 | 396 | 462 | 2.33e-12 | 69.3 |
| Msa0713680 | MtrunA17_Chr3g0144071 | 29.921 | 127 | 81 | 2 | 45 | 163 | 8 | 134 | 2.78e-12 | 68.9 |
| Msa0713680 | MtrunA17_Chr1g0196911 | 41.237 | 97 | 54 | 2 | 68 | 162 | 507 | 602 | 3.23e-12 | 68.9 |
| Msa0713680 | MtrunA17_Chr7g0214471 | 35.398 | 113 | 54 | 3 | 67 | 161 | 595 | 706 | 1.97e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713680 | AT3G49810.1 | 74.058 | 451 | 114 | 1 | 1 | 451 | 1 | 448 | 0.0 | 669 |
| Msa0713680 | AT5G65920.1 | 71.397 | 451 | 122 | 1 | 1 | 451 | 1 | 444 | 0.0 | 649 |
| Msa0713680 | AT5G65920.2 | 71.397 | 451 | 122 | 1 | 1 | 451 | 1 | 444 | 0.0 | 649 |
| Msa0713680 | AT3G19380.1 | 30.105 | 382 | 242 | 11 | 57 | 416 | 3 | 381 | 6.02e-40 | 149 |
| Msa0713680 | AT1G49780.1 | 29.484 | 407 | 261 | 9 | 66 | 449 | 13 | 416 | 7.59e-37 | 140 |
| Msa0713680 | AT2G35930.1 | 26.368 | 402 | 269 | 9 | 63 | 443 | 8 | 403 | 3.38e-34 | 132 |
| Msa0713680 | AT5G64660.1 | 29.136 | 405 | 247 | 14 | 63 | 434 | 5 | 402 | 2.90e-33 | 130 |
| Msa0713680 | AT3G18710.1 | 28.244 | 393 | 255 | 10 | 67 | 436 | 12 | 400 | 1.32e-32 | 128 |
| Msa0713680 | AT3G54850.1 | 27.344 | 384 | 247 | 10 | 67 | 430 | 248 | 619 | 7.80e-31 | 125 |
| Msa0713680 | AT5G09800.1 | 26.794 | 418 | 259 | 13 | 60 | 447 | 4 | 404 | 9.59e-30 | 120 |
| Msa0713680 | AT1G23030.1 | 27.616 | 344 | 229 | 8 | 67 | 398 | 241 | 576 | 4.72e-29 | 120 |
| Msa0713680 | AT1G66160.1 | 26.753 | 385 | 260 | 8 | 60 | 430 | 27 | 403 | 1.33e-27 | 114 |
| Msa0713680 | AT1G71020.2 | 25.714 | 350 | 237 | 7 | 67 | 398 | 95 | 439 | 1.70e-25 | 108 |
| Msa0713680 | AT3G46510.1 | 25.195 | 385 | 257 | 7 | 67 | 432 | 256 | 628 | 2.41e-25 | 109 |
| Msa0713680 | AT3G52450.1 | 25.598 | 418 | 262 | 10 | 58 | 430 | 1 | 414 | 2.63e-25 | 108 |
| Msa0713680 | AT1G71020.1 | 25.714 | 350 | 237 | 7 | 67 | 398 | 243 | 587 | 2.91e-25 | 109 |
| Msa0713680 | AT5G42340.1 | 29.339 | 242 | 147 | 5 | 67 | 302 | 290 | 513 | 5.81e-25 | 108 |
| Msa0713680 | AT2G28830.1 | 25.588 | 340 | 229 | 6 | 68 | 388 | 185 | 519 | 1.52e-23 | 103 |
| Msa0713680 | AT5G37490.1 | 23.684 | 380 | 274 | 5 | 67 | 430 | 31 | 410 | 6.86e-20 | 92.0 |
| Msa0713680 | AT1G66160.2 | 24.675 | 385 | 252 | 9 | 60 | 430 | 27 | 387 | 7.38e-19 | 89.0 |
| Msa0713680 | AT1G29340.1 | 30.978 | 184 | 108 | 3 | 67 | 232 | 305 | 487 | 4.55e-18 | 87.4 |
| Msa0713680 | AT3G07360.1 | 29.004 | 231 | 138 | 8 | 55 | 261 | 57 | 285 | 1.61e-16 | 82.0 |
| Msa0713680 | AT5G01830.1 | 27.143 | 280 | 184 | 6 | 22 | 286 | 230 | 504 | 1.74e-16 | 82.4 |
| Msa0713680 | AT3G11840.1 | 53.247 | 77 | 34 | 2 | 58 | 133 | 1 | 76 | 8.40e-16 | 79.7 |
| Msa0713680 | AT4G21350.1 | 26.567 | 335 | 222 | 10 | 66 | 388 | 4 | 326 | 9.43e-16 | 79.0 |
| Msa0713680 | AT1G67530.2 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.96e-15 | 77.0 |
| Msa0713680 | AT1G67530.1 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.96e-15 | 77.0 |
| Msa0713680 | AT1G67530.4 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.96e-15 | 77.0 |
| Msa0713680 | AT1G67530.3 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 1.06e-14 | 76.6 |
| Msa0713680 | AT1G24330.1 | 50.725 | 69 | 34 | 0 | 68 | 136 | 276 | 344 | 4.40e-14 | 75.1 |
| Msa0713680 | AT1G24330.2 | 50.725 | 69 | 34 | 0 | 68 | 136 | 276 | 344 | 4.40e-14 | 75.1 |
| Msa0713680 | AT1G10560.1 | 24.679 | 312 | 200 | 8 | 71 | 355 | 292 | 595 | 4.95e-14 | 74.7 |
| Msa0713680 | AT1G27910.1 | 50.000 | 70 | 35 | 0 | 68 | 137 | 280 | 349 | 7.13e-14 | 74.3 |
| Msa0713680 | AT1G60190.1 | 23.754 | 341 | 230 | 10 | 73 | 388 | 284 | 619 | 1.58e-13 | 73.2 |
| Msa0713680 | AT5G67340.1 | 46.269 | 67 | 36 | 0 | 67 | 133 | 240 | 306 | 2.50e-12 | 69.7 |
| Msa0713680 | AT5G67340.2 | 46.269 | 67 | 36 | 0 | 67 | 133 | 240 | 306 | 2.50e-12 | 69.7 |
| Msa0713680 | AT3G54790.2 | 41.176 | 68 | 40 | 0 | 67 | 134 | 202 | 269 | 4.72e-12 | 68.6 |
| Msa0713680 | AT2G23140.1 | 46.032 | 63 | 34 | 0 | 71 | 133 | 237 | 299 | 4.91e-12 | 68.6 |
| Msa0713680 | AT2G23140.2 | 46.032 | 63 | 34 | 0 | 71 | 133 | 234 | 296 | 5.07e-12 | 68.6 |
| Msa0713680 | AT2G23140.4 | 46.032 | 63 | 34 | 0 | 71 | 133 | 234 | 296 | 5.07e-12 | 68.6 |
| Msa0713680 | AT2G23140.3 | 46.032 | 63 | 34 | 0 | 71 | 133 | 45 | 107 | 5.13e-12 | 68.6 |
| Msa0713680 | AT2G23140.5 | 46.032 | 63 | 34 | 0 | 71 | 133 | 45 | 107 | 5.13e-12 | 68.6 |
| Msa0713680 | AT3G54790.3 | 41.176 | 68 | 40 | 0 | 67 | 134 | 238 | 305 | 5.87e-12 | 68.6 |
| Msa0713680 | AT3G54790.1 | 41.176 | 68 | 40 | 0 | 67 | 134 | 238 | 305 | 5.87e-12 | 68.6 |
| Msa0713680 | AT5G65500.1 | 43.056 | 72 | 41 | 0 | 66 | 137 | 714 | 785 | 3.90e-11 | 65.9 |
| Msa0713680 | AT5G65500.2 | 43.056 | 72 | 41 | 0 | 66 | 137 | 722 | 793 | 4.09e-11 | 65.9 |
Find 98 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTCCAGCCATAGTTTAT+TGG | 0.212618 | 5_1:-6000770 | Msa0713680:CDS |
| GCAGATTGTTGTTTCAATAT+TGG | 0.233260 | 5_1:+6000331 | None:intergenic |
| GGAATTAGCCCTTTGTGTTT+TGG | 0.251271 | 5_1:-6000578 | Msa0713680:CDS |
| TGCATTGGTTCAAGAGAAAT+TGG | 0.251419 | 5_1:+6001363 | None:intergenic |
| CTCCAAACACAACACTTTAT+AGG | 0.268814 | 5_1:-6001221 | Msa0713680:CDS |
| CTATGTATCAGCCTTCTAAA+AGG | 0.293724 | 5_1:-6001578 | Msa0713680:CDS |
| TGTCCAGTGCAAAGAGTAAC+AGG | 0.310547 | 5_1:+6001336 | None:intergenic |
| TACAACTATGCAAGAGCTTT+GGG | 0.339571 | 5_1:-6001256 | Msa0713680:CDS |
| CCAACAGCATGTGAAGTAAA+AGG | 0.340191 | 5_1:+6000976 | None:intergenic |
| CAGAACAGTGTGCTTCTATA+AGG | 0.348100 | 5_1:-6000680 | Msa0713680:CDS |
| ACCTGCAAAGATTTCTTTGA+TGG | 0.353869 | 5_1:-6000887 | Msa0713680:CDS |
| GAGAATGTTGTTCCTCTCAT+AGG | 0.363619 | 5_1:+6001311 | None:intergenic |
| TCAATCCAACCAATAAACTA+TGG | 0.369818 | 5_1:+6000761 | None:intergenic |
| GCTGTTGGTTCTGAAGTTAT+TGG | 0.374377 | 5_1:-6000961 | Msa0713680:CDS |
| GGGTATGAGGGTGGTGGTGA+TGG | 0.376806 | 5_1:-6001543 | Msa0713680:CDS |
| TCGTCGATTGCCGTTGATGC+AGG | 0.377688 | 5_1:-6000397 | Msa0713680:CDS |
| GTTGATTGTGGTGGTATTGT+AGG | 0.378694 | 5_1:-6001471 | Msa0713680:CDS |
| TTCAAAGCTACCCTGCCTTC+AGG | 0.379046 | 5_1:+6000538 | None:intergenic |
| AACCTATAAAGTGTTGTGTT+TGG | 0.379505 | 5_1:+6001219 | None:intergenic |
| ACCATCAAAGAAATCTTTGC+AGG | 0.386948 | 5_1:+6000886 | None:intergenic |
| AGCTGTGAAAGATGGGGTTT+TGG | 0.389850 | 5_1:-6001499 | Msa0713680:CDS |
| CAAAGCTCTTGCATAGTTGT+AGG | 0.392894 | 5_1:+6001258 | None:intergenic |
| AGCTAGAGTTCATGCTTTGA+AGG | 0.394200 | 5_1:-6001088 | Msa0713680:CDS |
| CAATTAGTTGAATTGTTGTC+TGG | 0.396249 | 5_1:-6000619 | Msa0713680:CDS |
| TCAGCCTTCTAAAAGGGATA+TGG | 0.401063 | 5_1:-6001571 | Msa0713680:CDS |
| CTACAACTATGCAAGAGCTT+TGG | 0.413732 | 5_1:-6001257 | Msa0713680:CDS |
| ATTGTAGGAACTGGTGTTGT+TGG | 0.418341 | 5_1:-6001456 | Msa0713680:CDS |
| TGAAGGCAGGGTAGCTTTGA+AGG | 0.418617 | 5_1:-6000536 | Msa0713680:CDS |
| GGATATGGTTGTTGGGTATG+AGG | 0.419887 | 5_1:-6001556 | Msa0713680:CDS |
| AGTTGAATTGTTGTCTGGTA+TGG | 0.429978 | 5_1:-6000614 | Msa0713680:CDS |
| CCAGTGTCATTGGATGGTTC+TGG | 0.433464 | 5_1:+6000243 | None:intergenic |
| TCTAAAAGGGATATGGTTGT+TGG | 0.433712 | 5_1:-6001564 | Msa0713680:CDS |
| ATCAAAAGTCTCACCATGAT+AGG | 0.446610 | 5_1:+6000496 | None:intergenic |
| AGCGGCAAGCCCTGCATCAA+CGG | 0.453178 | 5_1:+6000387 | None:intergenic |
| TCCAACCAATAAACTATGGC+TGG | 0.454386 | 5_1:+6000765 | None:intergenic |
| TGGTATGGACCATGATTGTT+TGG | 0.458739 | 5_1:-6000599 | Msa0713680:CDS |
| TGATGGTCAGATTCTAGATC+TGG | 0.470143 | 5_1:-6001526 | Msa0713680:CDS |
| CTGGACACAGCTGTGAAAGA+TGG | 0.472189 | 5_1:-6001507 | Msa0713680:CDS |
| CTAAAAGGGATATGGTTGTT+GGG | 0.472206 | 5_1:-6001563 | Msa0713680:CDS |
| TGGATTGATGAGGCTTGTTA+AGG | 0.477377 | 5_1:-6000746 | Msa0713680:CDS |
| CATTCTCAAATGGTTTAACA+TGG | 0.477905 | 5_1:-6001295 | Msa0713680:CDS |
| AAGTGTTGTGTTTGGAGTGA+TGG | 0.479659 | 5_1:+6001227 | None:intergenic |
| CGTCGATTGCCGTTGATGCA+GGG | 0.480126 | 5_1:-6000396 | Msa0713680:CDS |
| TGGACACAGCTGTGAAAGAT+GGG | 0.480846 | 5_1:-6001506 | Msa0713680:CDS |
| TCCAGCCATAGTTTATTGGT+TGG | 0.483049 | 5_1:-6000766 | Msa0713680:CDS |
| TTTATAGGTTAATATATACT+TGG | 0.486014 | 5_1:-6001206 | Msa0713680:CDS |
| AGAGGAACAACATTCTCAAA+TGG | 0.486614 | 5_1:-6001305 | Msa0713680:CDS |
| GCACGTAAGTCTGTGATTGA+TGG | 0.491037 | 5_1:-6001033 | Msa0713680:CDS |
| TTGGGTGGTGTTGATTGTGG+TGG | 0.491523 | 5_1:-6001480 | Msa0713680:CDS |
| TGTTAACACCATACCTATCA+TGG | 0.494074 | 5_1:-6000509 | Msa0713680:CDS |
| CATAGCAATGGAATCTGTCC+TGG | 0.495678 | 5_1:-6000715 | Msa0713680:CDS |
| GGCAATCGACGAACACTCCT+CGG | 0.495695 | 5_1:+6000408 | None:intergenic |
| AGGAAGAGCTTCTGAGCTTG+TGG | 0.496986 | 5_1:-6001136 | Msa0713680:CDS |
| ATGGTTGTTGGGTATGAGGG+TGG | 0.497015 | 5_1:-6001552 | Msa0713680:CDS |
| TGTGGTGGTATTGTAGGAAC+TGG | 0.497597 | 5_1:-6001465 | Msa0713680:CDS |
| GTTGATTGAAACGTTAATTG+AGG | 0.502694 | 5_1:-6000815 | Msa0713680:CDS |
| GATATGGTTGTTGGGTATGA+GGG | 0.510561 | 5_1:-6001555 | Msa0713680:CDS |
| TATGTATCAGCCTTCTAAAA+GGG | 0.514271 | 5_1:-6001577 | Msa0713680:CDS |
| CTTACACTTGGAAATGAAGA+TGG | 0.515200 | 5_1:+6000270 | None:intergenic |
| GATGGTTGATATCTTGAATG+AGG | 0.519499 | 5_1:-6000869 | Msa0713680:CDS |
| CTCCTTCTTGTGATTCAAAG+TGG | 0.522084 | 5_1:-6000361 | Msa0713680:CDS |
| TATCGTCAATACCTGAAGGC+AGG | 0.524187 | 5_1:-6000549 | Msa0713680:CDS |
| GACCCTGTTACTCTTTGCAC+TGG | 0.524861 | 5_1:-6001339 | Msa0713680:CDS |
| GAAGGAGCTTCATCAAGTTG+TGG | 0.525660 | 5_1:-6001070 | Msa0713680:CDS |
| AAGAGGTCTGAAGATGTTCA+AGG | 0.532675 | 5_1:-6001156 | Msa0713680:CDS |
| GTTGTTGGGTATGAGGGTGG+TGG | 0.533466 | 5_1:-6001549 | Msa0713680:CDS |
| TTTAATCCAGTGTCATTGGA+TGG | 0.544882 | 5_1:+6000237 | None:intergenic |
| GCAATCGACGAACACTCCTC+GGG | 0.548555 | 5_1:+6000409 | None:intergenic |
| GGGCTAATTCCAAACAATCA+TGG | 0.556734 | 5_1:+6000590 | None:intergenic |
| AGAGTAACAGGGTCTTGCAT+TGG | 0.556765 | 5_1:+6001348 | None:intergenic |
| TAACGAATCCAAAACACAAA+GGG | 0.557474 | 5_1:+6000570 | None:intergenic |
| AAGTCTCACCATGATAGGTA+TGG | 0.557498 | 5_1:+6000501 | None:intergenic |
| GTTTATTGGTTGGATTGATG+AGG | 0.566504 | 5_1:-6000756 | Msa0713680:CDS |
| GGTTCTGGTAAGCTTACACT+TGG | 0.573632 | 5_1:+6000258 | None:intergenic |
| AGTACTTGTTGATGAAGAAG+AGG | 0.579589 | 5_1:-6001173 | Msa0713680:CDS |
| TGTTTGCAAGCTCGCACCCG+AGG | 0.590908 | 5_1:-6000425 | Msa0713680:CDS |
| AATCACAAGAAGGAGCTTAG+CGG | 0.593465 | 5_1:+6000369 | None:intergenic |
| ATGGTTGATATCTTGAATGA+GGG | 0.598018 | 5_1:-6000868 | Msa0713680:CDS |
| TATAGAAGCACACTGTTCTG+AGG | 0.600791 | 5_1:+6000683 | None:intergenic |
| ATCGTCAATACCTGAAGGCA+GGG | 0.601834 | 5_1:-6000548 | Msa0713680:CDS |
| AACCACTTTGAATCACAAGA+AGG | 0.602714 | 5_1:+6000359 | None:intergenic |
| GTTCTGAGGAGGCTTAATCC+AGG | 0.612490 | 5_1:+6000697 | None:intergenic |
| ATTCTCAAATGGTTTAACAT+GGG | 0.615647 | 5_1:-6001294 | Msa0713680:CDS |
| GGAGACACTCAAGAAGGTGA+AGG | 0.620138 | 5_1:-6001115 | Msa0713680:CDS |
| AGAAGCACACTGTTCTGAGG+AGG | 0.626107 | 5_1:+6000686 | None:intergenic |
| GAGACACTCAAGAAGGTGAA+GGG | 0.631748 | 5_1:-6001114 | Msa0713680:CDS |
| ATTGGACAAATGAAAACACT+TGG | 0.634832 | 5_1:+6001381 | None:intergenic |
| TCGTTATCGTCAATACCTGA+AGG | 0.636371 | 5_1:-6000553 | Msa0713680:CDS |
| ACTATGGCTGGAGATAATCT+CGG | 0.640439 | 5_1:+6000777 | None:intergenic |
| AAGTCTGTGATTGATGGAGG+TGG | 0.645793 | 5_1:-6001027 | Msa0713680:CDS |
| GCTTGTGGAGACACTCAAGA+AGG | 0.651353 | 5_1:-6001121 | Msa0713680:CDS |
| CGTAAGTCTGTGATTGATGG+AGG | 0.663245 | 5_1:-6001030 | Msa0713680:CDS |
| AAGGATAAGAGACATAGCAA+TGG | 0.668679 | 5_1:-6000727 | Msa0713680:CDS |
| GCACTGGACAAACCTATGAG+AGG | 0.669601 | 5_1:-6001323 | Msa0713680:CDS |
| ATAACGAATCCAAAACACAA+AGG | 0.671691 | 5_1:+6000569 | None:intergenic |
| GGACACAGCTGTGAAAGATG+GGG | 0.688951 | 5_1:-6001505 | Msa0713680:CDS |
| AGACTAAAATCAGTTGCACG+CGG | 0.721441 | 5_1:-6000837 | Msa0713680:CDS |
| GTCCAGTGCAAAGAGTAACA+GGG | 0.727176 | 5_1:+6001337 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAGGTTAATATATACT+TGG | - | chr5_1:6000625-6000644 | Msa0713680:CDS | 15.0% |
| !! | TTTATAGGTTAATATATACT+TGG | - | chr5_1:6000625-6000644 | Msa0713680:CDS | 15.0% |
| ! | ATTCTCAAATGGTTTAACAT+GGG | - | chr5_1:6000537-6000556 | Msa0713680:CDS | 25.0% |
| !! | AAGATTTTGTTAGTTAGCAT+TGG | - | chr5_1:6001179-6001198 | Msa0713680:CDS | 25.0% |
| ! | ATTCTCAAATGGTTTAACAT+GGG | - | chr5_1:6000537-6000556 | Msa0713680:CDS | 25.0% |
| !! | AAGATTTTGTTAGTTAGCAT+TGG | - | chr5_1:6001179-6001198 | Msa0713680:CDS | 25.0% |
| ! | TATGTATCAGCCTTCTAAAA+GGG | - | chr5_1:6000254-6000273 | Msa0713680:CDS | 30.0% |
| ATTGGACAAATGAAAACACT+TGG | + | chr5_1:6000453-6000472 | None:intergenic | 30.0% | |
| CATTCTCAAATGGTTTAACA+TGG | - | chr5_1:6000536-6000555 | Msa0713680:CDS | 30.0% | |
| !! | AACCTATAAAGTGTTGTGTT+TGG | + | chr5_1:6000615-6000634 | None:intergenic | 30.0% |
| ! | TCTGTTTTGTCTTCTTTACT+TGG | - | chr5_1:6000831-6000850 | Msa0713680:CDS | 30.0% |
| ! | ATGGTTGATATCTTGAATGA+GGG | - | chr5_1:6000963-6000982 | Msa0713680:CDS | 30.0% |
| GTTGATTGAAACGTTAATTG+AGG | - | chr5_1:6001016-6001035 | Msa0713680:CDS | 30.0% | |
| TCAATCCAACCAATAAACTA+TGG | + | chr5_1:6001073-6001092 | None:intergenic | 30.0% | |
| CAATTAGTTGAATTGTTGTC+TGG | - | chr5_1:6001212-6001231 | Msa0713680:CDS | 30.0% | |
| TAACGAATCCAAAACACAAA+GGG | + | chr5_1:6001264-6001283 | None:intergenic | 30.0% | |
| ATAACGAATCCAAAACACAA+AGG | + | chr5_1:6001265-6001284 | None:intergenic | 30.0% | |
| ! | AGTATGCATTGTCAATTTTG+TGG | - | chr5_1:6001381-6001400 | Msa0713680:CDS | 30.0% |
| !! | GCAGATTGTTGTTTCAATAT+TGG | + | chr5_1:6001503-6001522 | None:intergenic | 30.0% |
| ! | TATGTATCAGCCTTCTAAAA+GGG | - | chr5_1:6000254-6000273 | Msa0713680:CDS | 30.0% |
| ATTGGACAAATGAAAACACT+TGG | + | chr5_1:6000453-6000472 | None:intergenic | 30.0% | |
| CATTCTCAAATGGTTTAACA+TGG | - | chr5_1:6000536-6000555 | Msa0713680:CDS | 30.0% | |
| !! | AACCTATAAAGTGTTGTGTT+TGG | + | chr5_1:6000615-6000634 | None:intergenic | 30.0% |
| ! | TCTGTTTTGTCTTCTTTACT+TGG | - | chr5_1:6000831-6000850 | Msa0713680:CDS | 30.0% |
| ! | ATGGTTGATATCTTGAATGA+GGG | - | chr5_1:6000963-6000982 | Msa0713680:CDS | 30.0% |
| GTTGATTGAAACGTTAATTG+AGG | - | chr5_1:6001016-6001035 | Msa0713680:CDS | 30.0% | |
| TCAATCCAACCAATAAACTA+TGG | + | chr5_1:6001073-6001092 | None:intergenic | 30.0% | |
| CAATTAGTTGAATTGTTGTC+TGG | - | chr5_1:6001212-6001231 | Msa0713680:CDS | 30.0% | |
| TAACGAATCCAAAACACAAA+GGG | + | chr5_1:6001264-6001283 | None:intergenic | 30.0% | |
| ATAACGAATCCAAAACACAA+AGG | + | chr5_1:6001265-6001284 | None:intergenic | 30.0% | |
| ! | AGTATGCATTGTCAATTTTG+TGG | - | chr5_1:6001381-6001400 | Msa0713680:CDS | 30.0% |
| !! | GCAGATTGTTGTTTCAATAT+TGG | + | chr5_1:6001503-6001522 | None:intergenic | 30.0% |
| !! | CTTTTAGAAGGCTGATACAT+AGG | + | chr5_1:6000255-6000274 | None:intergenic | 35.0% |
| CTATGTATCAGCCTTCTAAA+AGG | - | chr5_1:6000253-6000272 | Msa0713680:CDS | 35.0% | |
| ! | ACAACCATATCCCTTTTAGA+AGG | + | chr5_1:6000267-6000286 | None:intergenic | 35.0% |
| TCTAAAAGGGATATGGTTGT+TGG | - | chr5_1:6000267-6000286 | Msa0713680:CDS | 35.0% | |
| CTAAAAGGGATATGGTTGTT+GGG | - | chr5_1:6000268-6000287 | Msa0713680:CDS | 35.0% | |
| !! | TGCATTGGTTCAAGAGAAAT+TGG | + | chr5_1:6000471-6000490 | None:intergenic | 35.0% |
| AGAGGAACAACATTCTCAAA+TGG | - | chr5_1:6000526-6000545 | Msa0713680:CDS | 35.0% | |
| TACAACTATGCAAGAGCTTT+GGG | - | chr5_1:6000575-6000594 | Msa0713680:CDS | 35.0% | |
| CTCCAAACACAACACTTTAT+AGG | - | chr5_1:6000610-6000629 | Msa0713680:CDS | 35.0% | |
| ! | AGTACTTGTTGATGAAGAAG+AGG | - | chr5_1:6000658-6000677 | Msa0713680:CDS | 35.0% |
| ACCTGCAAAGATTTCTTTGA+TGG | - | chr5_1:6000944-6000963 | Msa0713680:CDS | 35.0% | |
| ACCATCAAAGAAATCTTTGC+AGG | + | chr5_1:6000948-6000967 | None:intergenic | 35.0% | |
| ! | GATGGTTGATATCTTGAATG+AGG | - | chr5_1:6000962-6000981 | Msa0713680:CDS | 35.0% |
| TATCTCCAGCCATAGTTTAT+TGG | - | chr5_1:6001061-6001080 | Msa0713680:CDS | 35.0% | |
| ! | GTTTATTGGTTGGATTGATG+AGG | - | chr5_1:6001075-6001094 | Msa0713680:CDS | 35.0% |
| AAGGATAAGAGACATAGCAA+TGG | - | chr5_1:6001104-6001123 | Msa0713680:CDS | 35.0% | |
| AGTTGAATTGTTGTCTGGTA+TGG | - | chr5_1:6001217-6001236 | Msa0713680:CDS | 35.0% | |
| TGTTAACACCATACCTATCA+TGG | - | chr5_1:6001322-6001341 | Msa0713680:CDS | 35.0% | |
| ATCAAAAGTCTCACCATGAT+AGG | + | chr5_1:6001338-6001357 | None:intergenic | 35.0% | |
| AACCACTTTGAATCACAAGA+AGG | + | chr5_1:6001475-6001494 | None:intergenic | 35.0% | |
| CTTACACTTGGAAATGAAGA+TGG | + | chr5_1:6001564-6001583 | None:intergenic | 35.0% | |
| !! | CTTTTAGAAGGCTGATACAT+AGG | + | chr5_1:6000255-6000274 | None:intergenic | 35.0% |
| CTATGTATCAGCCTTCTAAA+AGG | - | chr5_1:6000253-6000272 | Msa0713680:CDS | 35.0% | |
| ! | ACAACCATATCCCTTTTAGA+AGG | + | chr5_1:6000267-6000286 | None:intergenic | 35.0% |
| TCTAAAAGGGATATGGTTGT+TGG | - | chr5_1:6000267-6000286 | Msa0713680:CDS | 35.0% | |
| CTAAAAGGGATATGGTTGTT+GGG | - | chr5_1:6000268-6000287 | Msa0713680:CDS | 35.0% | |
| !! | TGCATTGGTTCAAGAGAAAT+TGG | + | chr5_1:6000471-6000490 | None:intergenic | 35.0% |
| AGAGGAACAACATTCTCAAA+TGG | - | chr5_1:6000526-6000545 | Msa0713680:CDS | 35.0% | |
| TACAACTATGCAAGAGCTTT+GGG | - | chr5_1:6000575-6000594 | Msa0713680:CDS | 35.0% | |
| CTCCAAACACAACACTTTAT+AGG | - | chr5_1:6000610-6000629 | Msa0713680:CDS | 35.0% | |
| ! | AGTACTTGTTGATGAAGAAG+AGG | - | chr5_1:6000658-6000677 | Msa0713680:CDS | 35.0% |
| ACCTGCAAAGATTTCTTTGA+TGG | - | chr5_1:6000944-6000963 | Msa0713680:CDS | 35.0% | |
| ACCATCAAAGAAATCTTTGC+AGG | + | chr5_1:6000948-6000967 | None:intergenic | 35.0% | |
| ! | GATGGTTGATATCTTGAATG+AGG | - | chr5_1:6000962-6000981 | Msa0713680:CDS | 35.0% |
| TATCTCCAGCCATAGTTTAT+TGG | - | chr5_1:6001061-6001080 | Msa0713680:CDS | 35.0% | |
| ! | GTTTATTGGTTGGATTGATG+AGG | - | chr5_1:6001075-6001094 | Msa0713680:CDS | 35.0% |
| AAGGATAAGAGACATAGCAA+TGG | - | chr5_1:6001104-6001123 | Msa0713680:CDS | 35.0% | |
| AGTTGAATTGTTGTCTGGTA+TGG | - | chr5_1:6001217-6001236 | Msa0713680:CDS | 35.0% | |
| TGTTAACACCATACCTATCA+TGG | - | chr5_1:6001322-6001341 | Msa0713680:CDS | 35.0% | |
| ATCAAAAGTCTCACCATGAT+AGG | + | chr5_1:6001338-6001357 | None:intergenic | 35.0% | |
| AACCACTTTGAATCACAAGA+AGG | + | chr5_1:6001475-6001494 | None:intergenic | 35.0% | |
| CTTACACTTGGAAATGAAGA+TGG | + | chr5_1:6001564-6001583 | None:intergenic | 35.0% | |
| ! | TCAGCCTTCTAAAAGGGATA+TGG | - | chr5_1:6000260-6000279 | Msa0713680:CDS | 40.0% |
| GATATGGTTGTTGGGTATGA+GGG | - | chr5_1:6000276-6000295 | Msa0713680:CDS | 40.0% | |
| TGATGGTCAGATTCTAGATC+TGG | - | chr5_1:6000305-6000324 | Msa0713680:CDS | 40.0% | |
| GTTGATTGTGGTGGTATTGT+AGG | - | chr5_1:6000360-6000379 | Msa0713680:CDS | 40.0% | |
| !! | ATTGTAGGAACTGGTGTTGT+TGG | - | chr5_1:6000375-6000394 | Msa0713680:CDS | 40.0% |
| GAGAATGTTGTTCCTCTCAT+AGG | + | chr5_1:6000523-6000542 | None:intergenic | 40.0% | |
| CAAAGCTCTTGCATAGTTGT+AGG | + | chr5_1:6000576-6000595 | None:intergenic | 40.0% | |
| CTACAACTATGCAAGAGCTT+TGG | - | chr5_1:6000574-6000593 | Msa0713680:CDS | 40.0% | |
| ! | AAGTGTTGTGTTTGGAGTGA+TGG | + | chr5_1:6000607-6000626 | None:intergenic | 40.0% |
| AAGAGGTCTGAAGATGTTCA+AGG | - | chr5_1:6000675-6000694 | Msa0713680:CDS | 40.0% | |
| AGCTAGAGTTCATGCTTTGA+AGG | - | chr5_1:6000743-6000762 | Msa0713680:CDS | 40.0% | |
| CCAACAGCATGTGAAGTAAA+AGG | + | chr5_1:6000858-6000877 | None:intergenic | 40.0% | |
| ! | CCTTTTACTTCACATGCTGT+TGG | - | chr5_1:6000855-6000874 | Msa0713680:CDS | 40.0% |
| !! | GCTGTTGGTTCTGAAGTTAT+TGG | - | chr5_1:6000870-6000889 | Msa0713680:CDS | 40.0% |
| AGACTAAAATCAGTTGCACG+CGG | - | chr5_1:6000994-6001013 | Msa0713680:CDS | 40.0% | |
| ACTATGGCTGGAGATAATCT+CGG | + | chr5_1:6001057-6001076 | None:intergenic | 40.0% | |
| TCCAGCCATAGTTTATTGGT+TGG | - | chr5_1:6001065-6001084 | Msa0713680:CDS | 40.0% | |
| TCCAACCAATAAACTATGGC+TGG | + | chr5_1:6001069-6001088 | None:intergenic | 40.0% | |
| !! | TGGATTGATGAGGCTTGTTA+AGG | - | chr5_1:6001085-6001104 | Msa0713680:CDS | 40.0% |
| ! | TATAGAAGCACACTGTTCTG+AGG | + | chr5_1:6001151-6001170 | None:intergenic | 40.0% |
| CAGAACAGTGTGCTTCTATA+AGG | - | chr5_1:6001151-6001170 | Msa0713680:CDS | 40.0% | |
| TGGTATGGACCATGATTGTT+TGG | - | chr5_1:6001232-6001251 | Msa0713680:CDS | 40.0% | |
| GGGCTAATTCCAAACAATCA+TGG | + | chr5_1:6001244-6001263 | None:intergenic | 40.0% | |
| ! | GGAATTAGCCCTTTGTGTTT+TGG | - | chr5_1:6001253-6001272 | Msa0713680:CDS | 40.0% |
| TCGTTATCGTCAATACCTGA+AGG | - | chr5_1:6001278-6001297 | Msa0713680:CDS | 40.0% | |
| AAGTCTCACCATGATAGGTA+TGG | + | chr5_1:6001333-6001352 | None:intergenic | 40.0% | |
| ! | TCATGGTGAGACTTTTGATG+AGG | - | chr5_1:6001339-6001358 | Msa0713680:CDS | 40.0% |
| AATCACAAGAAGGAGCTTAG+CGG | + | chr5_1:6001465-6001484 | None:intergenic | 40.0% | |
| CTCCTTCTTGTGATTCAAAG+TGG | - | chr5_1:6001470-6001489 | Msa0713680:CDS | 40.0% | |
| ! | TCAGCCTTCTAAAAGGGATA+TGG | - | chr5_1:6000260-6000279 | Msa0713680:CDS | 40.0% |
| GATATGGTTGTTGGGTATGA+GGG | - | chr5_1:6000276-6000295 | Msa0713680:CDS | 40.0% | |
| TGATGGTCAGATTCTAGATC+TGG | - | chr5_1:6000305-6000324 | Msa0713680:CDS | 40.0% | |
| GTTGATTGTGGTGGTATTGT+AGG | - | chr5_1:6000360-6000379 | Msa0713680:CDS | 40.0% | |
| !! | ATTGTAGGAACTGGTGTTGT+TGG | - | chr5_1:6000375-6000394 | Msa0713680:CDS | 40.0% |
| GAGAATGTTGTTCCTCTCAT+AGG | + | chr5_1:6000523-6000542 | None:intergenic | 40.0% | |
| CAAAGCTCTTGCATAGTTGT+AGG | + | chr5_1:6000576-6000595 | None:intergenic | 40.0% | |
| CTACAACTATGCAAGAGCTT+TGG | - | chr5_1:6000574-6000593 | Msa0713680:CDS | 40.0% | |
| ! | AAGTGTTGTGTTTGGAGTGA+TGG | + | chr5_1:6000607-6000626 | None:intergenic | 40.0% |
| AAGAGGTCTGAAGATGTTCA+AGG | - | chr5_1:6000675-6000694 | Msa0713680:CDS | 40.0% | |
| AGCTAGAGTTCATGCTTTGA+AGG | - | chr5_1:6000743-6000762 | Msa0713680:CDS | 40.0% | |
| CCAACAGCATGTGAAGTAAA+AGG | + | chr5_1:6000858-6000877 | None:intergenic | 40.0% | |
| ! | CCTTTTACTTCACATGCTGT+TGG | - | chr5_1:6000855-6000874 | Msa0713680:CDS | 40.0% |
| !! | GCTGTTGGTTCTGAAGTTAT+TGG | - | chr5_1:6000870-6000889 | Msa0713680:CDS | 40.0% |
| AGACTAAAATCAGTTGCACG+CGG | - | chr5_1:6000994-6001013 | Msa0713680:CDS | 40.0% | |
| ACTATGGCTGGAGATAATCT+CGG | + | chr5_1:6001057-6001076 | None:intergenic | 40.0% | |
| TCCAGCCATAGTTTATTGGT+TGG | - | chr5_1:6001065-6001084 | Msa0713680:CDS | 40.0% | |
| TCCAACCAATAAACTATGGC+TGG | + | chr5_1:6001069-6001088 | None:intergenic | 40.0% | |
| !! | TGGATTGATGAGGCTTGTTA+AGG | - | chr5_1:6001085-6001104 | Msa0713680:CDS | 40.0% |
| ! | TATAGAAGCACACTGTTCTG+AGG | + | chr5_1:6001151-6001170 | None:intergenic | 40.0% |
| CAGAACAGTGTGCTTCTATA+AGG | - | chr5_1:6001151-6001170 | Msa0713680:CDS | 40.0% | |
| TGGTATGGACCATGATTGTT+TGG | - | chr5_1:6001232-6001251 | Msa0713680:CDS | 40.0% | |
| GGGCTAATTCCAAACAATCA+TGG | + | chr5_1:6001244-6001263 | None:intergenic | 40.0% | |
| ! | GGAATTAGCCCTTTGTGTTT+TGG | - | chr5_1:6001253-6001272 | Msa0713680:CDS | 40.0% |
| TCGTTATCGTCAATACCTGA+AGG | - | chr5_1:6001278-6001297 | Msa0713680:CDS | 40.0% | |
| AAGTCTCACCATGATAGGTA+TGG | + | chr5_1:6001333-6001352 | None:intergenic | 40.0% | |
| ! | TCATGGTGAGACTTTTGATG+AGG | - | chr5_1:6001339-6001358 | Msa0713680:CDS | 40.0% |
| AATCACAAGAAGGAGCTTAG+CGG | + | chr5_1:6001465-6001484 | None:intergenic | 40.0% | |
| CTCCTTCTTGTGATTCAAAG+TGG | - | chr5_1:6001470-6001489 | Msa0713680:CDS | 40.0% | |
| GGATATGGTTGTTGGGTATG+AGG | - | chr5_1:6000275-6000294 | Msa0713680:CDS | 45.0% | |
| TGGACACAGCTGTGAAAGAT+GGG | - | chr5_1:6000325-6000344 | Msa0713680:CDS | 45.0% | |
| ! | AGCTGTGAAAGATGGGGTTT+TGG | - | chr5_1:6000332-6000351 | Msa0713680:CDS | 45.0% |
| ! | GCTGTGAAAGATGGGGTTTT+GGG | - | chr5_1:6000333-6000352 | Msa0713680:CDS | 45.0% |
| !!! | GTTTTGGGTGGTGTTGATTG+TGG | - | chr5_1:6000348-6000367 | Msa0713680:CDS | 45.0% |
| TGTGGTGGTATTGTAGGAAC+TGG | - | chr5_1:6000366-6000385 | Msa0713680:CDS | 45.0% | |
| AGAGTAACAGGGTCTTGCAT+TGG | + | chr5_1:6000486-6000505 | None:intergenic | 45.0% | |
| GTCCAGTGCAAAGAGTAACA+GGG | + | chr5_1:6000497-6000516 | None:intergenic | 45.0% | |
| TGTCCAGTGCAAAGAGTAAC+AGG | + | chr5_1:6000498-6000517 | None:intergenic | 45.0% | |
| GAGACACTCAAGAAGGTGAA+GGG | - | chr5_1:6000717-6000736 | Msa0713680:CDS | 45.0% | |
| ! | GAAGGAGCTTCATCAAGTTG+TGG | - | chr5_1:6000761-6000780 | Msa0713680:CDS | 45.0% |
| GCACGTAAGTCTGTGATTGA+TGG | - | chr5_1:6000798-6000817 | Msa0713680:CDS | 45.0% | |
| CGTAAGTCTGTGATTGATGG+AGG | - | chr5_1:6000801-6000820 | Msa0713680:CDS | 45.0% | |
| AAGTCTGTGATTGATGGAGG+TGG | - | chr5_1:6000804-6000823 | Msa0713680:CDS | 45.0% | |
| CATAGCAATGGAATCTGTCC+TGG | - | chr5_1:6001116-6001135 | Msa0713680:CDS | 45.0% | |
| TATCGTCAATACCTGAAGGC+AGG | - | chr5_1:6001282-6001301 | Msa0713680:CDS | 45.0% | |
| ATCGTCAATACCTGAAGGCA+GGG | - | chr5_1:6001283-6001302 | Msa0713680:CDS | 45.0% | |
| ! | GGTTCTGGTAAGCTTACACT+TGG | + | chr5_1:6001576-6001595 | None:intergenic | 45.0% |
| GGATATGGTTGTTGGGTATG+AGG | - | chr5_1:6000275-6000294 | Msa0713680:CDS | 45.0% | |
| TGGACACAGCTGTGAAAGAT+GGG | - | chr5_1:6000325-6000344 | Msa0713680:CDS | 45.0% | |
| ! | AGCTGTGAAAGATGGGGTTT+TGG | - | chr5_1:6000332-6000351 | Msa0713680:CDS | 45.0% |
| ! | GCTGTGAAAGATGGGGTTTT+GGG | - | chr5_1:6000333-6000352 | Msa0713680:CDS | 45.0% |
| !!! | GTTTTGGGTGGTGTTGATTG+TGG | - | chr5_1:6000348-6000367 | Msa0713680:CDS | 45.0% |
| TGTGGTGGTATTGTAGGAAC+TGG | - | chr5_1:6000366-6000385 | Msa0713680:CDS | 45.0% | |
| AGAGTAACAGGGTCTTGCAT+TGG | + | chr5_1:6000486-6000505 | None:intergenic | 45.0% | |
| GTCCAGTGCAAAGAGTAACA+GGG | + | chr5_1:6000497-6000516 | None:intergenic | 45.0% | |
| TGTCCAGTGCAAAGAGTAAC+AGG | + | chr5_1:6000498-6000517 | None:intergenic | 45.0% | |
| GAGACACTCAAGAAGGTGAA+GGG | - | chr5_1:6000717-6000736 | Msa0713680:CDS | 45.0% | |
| ! | GAAGGAGCTTCATCAAGTTG+TGG | - | chr5_1:6000761-6000780 | Msa0713680:CDS | 45.0% |
| GCACGTAAGTCTGTGATTGA+TGG | - | chr5_1:6000798-6000817 | Msa0713680:CDS | 45.0% | |
| CGTAAGTCTGTGATTGATGG+AGG | - | chr5_1:6000801-6000820 | Msa0713680:CDS | 45.0% | |
| AAGTCTGTGATTGATGGAGG+TGG | - | chr5_1:6000804-6000823 | Msa0713680:CDS | 45.0% | |
| CATAGCAATGGAATCTGTCC+TGG | - | chr5_1:6001116-6001135 | Msa0713680:CDS | 45.0% | |
| TATCGTCAATACCTGAAGGC+AGG | - | chr5_1:6001282-6001301 | Msa0713680:CDS | 45.0% | |
| ATCGTCAATACCTGAAGGCA+GGG | - | chr5_1:6001283-6001302 | Msa0713680:CDS | 45.0% | |
| ! | GGTTCTGGTAAGCTTACACT+TGG | + | chr5_1:6001576-6001595 | None:intergenic | 45.0% |
| ATGGTTGTTGGGTATGAGGG+TGG | - | chr5_1:6000279-6000298 | Msa0713680:CDS | 50.0% | |
| CTGGACACAGCTGTGAAAGA+TGG | - | chr5_1:6000324-6000343 | Msa0713680:CDS | 50.0% | |
| GGACACAGCTGTGAAAGATG+GGG | - | chr5_1:6000326-6000345 | Msa0713680:CDS | 50.0% | |
| !!! | GTGAAAGATGGGGTTTTGGG+TGG | - | chr5_1:6000336-6000355 | Msa0713680:CDS | 50.0% |
| !! | TTGGGTGGTGTTGATTGTGG+TGG | - | chr5_1:6000351-6000370 | Msa0713680:CDS | 50.0% |
| GACCCTGTTACTCTTTGCAC+TGG | - | chr5_1:6000492-6000511 | Msa0713680:CDS | 50.0% | |
| GCACTGGACAAACCTATGAG+AGG | - | chr5_1:6000508-6000527 | Msa0713680:CDS | 50.0% | |
| AGGAAGAGCTTCTGAGCTTG+TGG | - | chr5_1:6000695-6000714 | Msa0713680:CDS | 50.0% | |
| GCTTGTGGAGACACTCAAGA+AGG | - | chr5_1:6000710-6000729 | Msa0713680:CDS | 50.0% | |
| GGAGACACTCAAGAAGGTGA+AGG | - | chr5_1:6000716-6000735 | Msa0713680:CDS | 50.0% | |
| !! | GTTCTGAGGAGGCTTAATCC+AGG | + | chr5_1:6001137-6001156 | None:intergenic | 50.0% |
| !! | AGAAGCACACTGTTCTGAGG+AGG | + | chr5_1:6001148-6001167 | None:intergenic | 50.0% |
| TTCAAAGCTACCCTGCCTTC+AGG | + | chr5_1:6001296-6001315 | None:intergenic | 50.0% | |
| !! | TGAAGGCAGGGTAGCTTTGA+AGG | - | chr5_1:6001295-6001314 | Msa0713680:CDS | 50.0% |
| ATGGTTGTTGGGTATGAGGG+TGG | - | chr5_1:6000279-6000298 | Msa0713680:CDS | 50.0% | |
| CTGGACACAGCTGTGAAAGA+TGG | - | chr5_1:6000324-6000343 | Msa0713680:CDS | 50.0% | |
| GGACACAGCTGTGAAAGATG+GGG | - | chr5_1:6000326-6000345 | Msa0713680:CDS | 50.0% | |
| !!! | GTGAAAGATGGGGTTTTGGG+TGG | - | chr5_1:6000336-6000355 | Msa0713680:CDS | 50.0% |
| !! | TTGGGTGGTGTTGATTGTGG+TGG | - | chr5_1:6000351-6000370 | Msa0713680:CDS | 50.0% |
| GACCCTGTTACTCTTTGCAC+TGG | - | chr5_1:6000492-6000511 | Msa0713680:CDS | 50.0% | |
| GCACTGGACAAACCTATGAG+AGG | - | chr5_1:6000508-6000527 | Msa0713680:CDS | 50.0% | |
| AGGAAGAGCTTCTGAGCTTG+TGG | - | chr5_1:6000695-6000714 | Msa0713680:CDS | 50.0% | |
| GCTTGTGGAGACACTCAAGA+AGG | - | chr5_1:6000710-6000729 | Msa0713680:CDS | 50.0% | |
| GGAGACACTCAAGAAGGTGA+AGG | - | chr5_1:6000716-6000735 | Msa0713680:CDS | 50.0% | |
| !! | GTTCTGAGGAGGCTTAATCC+AGG | + | chr5_1:6001137-6001156 | None:intergenic | 50.0% |
| !! | AGAAGCACACTGTTCTGAGG+AGG | + | chr5_1:6001148-6001167 | None:intergenic | 50.0% |
| TTCAAAGCTACCCTGCCTTC+AGG | + | chr5_1:6001296-6001315 | None:intergenic | 50.0% | |
| !! | TGAAGGCAGGGTAGCTTTGA+AGG | - | chr5_1:6001295-6001314 | Msa0713680:CDS | 50.0% |
| GTTGTTGGGTATGAGGGTGG+TGG | - | chr5_1:6000282-6000301 | Msa0713680:CDS | 55.0% | |
| GCAATCGACGAACACTCCTC+GGG | + | chr5_1:6001425-6001444 | None:intergenic | 55.0% | |
| GGCAATCGACGAACACTCCT+CGG | + | chr5_1:6001426-6001445 | None:intergenic | 55.0% | |
| ! | TCGTCGATTGCCGTTGATGC+AGG | - | chr5_1:6001434-6001453 | Msa0713680:CDS | 55.0% |
| ! | CGTCGATTGCCGTTGATGCA+GGG | - | chr5_1:6001435-6001454 | Msa0713680:CDS | 55.0% |
| GTTGTTGGGTATGAGGGTGG+TGG | - | chr5_1:6000282-6000301 | Msa0713680:CDS | 55.0% | |
| GCAATCGACGAACACTCCTC+GGG | + | chr5_1:6001425-6001444 | None:intergenic | 55.0% | |
| GGCAATCGACGAACACTCCT+CGG | + | chr5_1:6001426-6001445 | None:intergenic | 55.0% | |
| ! | TCGTCGATTGCCGTTGATGC+AGG | - | chr5_1:6001434-6001453 | Msa0713680:CDS | 55.0% |
| ! | CGTCGATTGCCGTTGATGCA+GGG | - | chr5_1:6001435-6001454 | Msa0713680:CDS | 55.0% |
| ! | GGGTATGAGGGTGGTGGTGA+TGG | - | chr5_1:6000288-6000307 | Msa0713680:CDS | 60.0% |
| TGTTTGCAAGCTCGCACCCG+AGG | - | chr5_1:6001406-6001425 | Msa0713680:CDS | 60.0% | |
| AGCGGCAAGCCCTGCATCAA+CGG | + | chr5_1:6001447-6001466 | None:intergenic | 60.0% | |
| ! | GGGTATGAGGGTGGTGGTGA+TGG | - | chr5_1:6000288-6000307 | Msa0713680:CDS | 60.0% |
| TGTTTGCAAGCTCGCACCCG+AGG | - | chr5_1:6001406-6001425 | Msa0713680:CDS | 60.0% | |
| AGCGGCAAGCCCTGCATCAA+CGG | + | chr5_1:6001447-6001466 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 6000249 | 6001604 | 6000249 | ID=Msa0713680;Name=Msa0713680 |
| chr5_1 | mRNA | 6000249 | 6001604 | 6000249 | ID=Msa0713680-mRNA-1;Parent=Msa0713680;Name=Msa0713680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|451 |
| chr5_1 | exon | 6000249 | 6001604 | 6000249 | ID=Msa0713680-mRNA-1:exon:2610;Parent=Msa0713680-mRNA-1 |
| chr5_1 | CDS | 6000249 | 6001604 | 6000249 | ID=Msa0713680-mRNA-1:cds;Parent=Msa0713680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
