AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1032410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032410 MtrunA17_Chr7g0254481 91.597 357 8 1 1 357 1 335 0.0 645
Msa1032410 MtrunA17_Chr3g0115281 42.411 224 105 2 103 326 84 283 5.87e-52 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032410 AT5G17710.2 55.689 334 112 7 1 327 1 305 2.57e-104 310
Msa1032410 AT5G17710.3 55.090 334 112 7 1 327 1 303 2.10e-102 305
Msa1032410 AT5G17710.1 55.090 334 112 7 1 327 1 303 2.10e-102 305
Msa1032410 AT1G36390.1 46.154 208 90 1 115 322 78 263 1.24e-58 191
Msa1032410 AT1G36390.2 46.154 208 90 1 115 322 78 263 1.24e-58 191

Find 148 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCCAGGAACGTAATTA+TGG 0.202120 7_1:+67310548 Msa1032410:three_prime_UTR
TCCTGTGGTGCTTCTTGTTC+CGG 0.235131 7_1:-67310402 None:intergenic
TAATACTAATTCCCCTTAAA+AGG 0.236252 7_1:-67310608 None:intergenic
GCTTCTTGTTCCGGCTTTGC+AGG 0.261284 7_1:-67310393 None:intergenic
AGCACACATTATGTATTCTT+TGG 0.262132 7_1:+67310830 Msa1032410:intron
CATCATTCTCTTTACTGTCC+TGG 0.306994 7_1:-67310449 None:intergenic
TTCACCCGAGGTTCAGGTTC+TGG 0.328084 7_1:+67306831 Msa1032410:CDS
TCAAGATTCACCCGAGGTTC+AGG 0.335433 7_1:+67306825 Msa1032410:CDS
GACGGAAACGCGTGAGGTTC+TGG 0.344746 7_1:-67306683 None:intergenic
GCTGATACCTTCACCATTGA+TGG 0.346148 7_1:-67310360 None:intergenic
AAGTGGTGAAGGTCTTCTTC+TGG 0.348290 7_1:-67306713 None:intergenic
CGGCGGTGGTGAGAAGGGTT+GGG 0.348997 7_1:-67306642 None:intergenic
GTGCAGACTTTGACAATTAT+CGG 0.363290 7_1:+67309160 Msa1032410:CDS
AGTGTTTGGCACCTGGAGTT+AGG 0.366923 7_1:+67310748 Msa1032410:three_prime_UTR
TGTTCCGGCTTTGCAGGTCC+TGG 0.373423 7_1:-67310387 None:intergenic
GCGGCGGTGGTGAGAAGGGT+TGG 0.378634 7_1:-67306643 None:intergenic
ACTGTCCTGGGAAGTTTCAT+TGG 0.386463 7_1:-67310436 None:intergenic
GGAGAGTTTGTTGCCTGTAT+TGG 0.387083 7_1:+67309239 Msa1032410:CDS
AGTTGAAGAGGAAATGAAAT+TGG 0.390879 7_1:-67306543 None:intergenic
TATTGATAACTCTTCGGATA+AGG 0.394655 7_1:-67309112 None:intergenic
ATCATTCTCTTTACTGTCCT+GGG 0.395244 7_1:-67310448 None:intergenic
ATCTCCAGGAACGTAATTAT+GGG 0.395601 7_1:+67310549 Msa1032410:three_prime_UTR
ATGGCCGGAATGTGGGAGTT+CGG 0.396663 7_1:-67306618 None:intergenic
GGTTGGGGATGGCCGGAATG+TGG 0.403395 7_1:-67306626 None:intergenic
GAGCATTTGTGACCAGTGAT+AGG 0.406167 7_1:-67309203 None:intergenic
TTTATGCCCTTGCATTGCTT+TGG 0.407272 7_1:+67310658 Msa1032410:three_prime_UTR
TTGATCAATTGCAACTCACT+TGG 0.411402 7_1:-67310726 None:intergenic
AAGGTACTAACTTGACGAAC+CGG 0.414480 7_1:-67306768 None:intergenic
GGCGGTGGTGAGAAGGGTTG+GGG 0.414826 7_1:-67306641 None:intergenic
AACACCCATAATTACGTTCC+TGG 0.419126 7_1:-67310553 None:intergenic
TCCTCCGAACTCCCACATTC+CGG 0.425268 7_1:+67306614 Msa1032410:CDS
CTCTCAAAATTATCCAATAC+AGG 0.430687 7_1:-67309252 None:intergenic
CTTGAAAGTACAACTTTGCC+TGG 0.435386 7_1:+67310493 Msa1032410:exon
TAACTTACCATTGGATCAAA+GGG 0.444978 7_1:-67309405 None:intergenic
ATTGGAAGAGGTGGCGGCGG+TGG 0.451328 7_1:-67306656 None:intergenic
TGATCAATTGCAACTCACTT+GGG 0.452875 7_1:-67310725 None:intergenic
GTTGCAATTGATCAAGTGTT+TGG 0.453341 7_1:+67310734 Msa1032410:three_prime_UTR
TTGATCAAGTGTTTGGCACC+TGG 0.461167 7_1:+67310741 Msa1032410:three_prime_UTR
GATGAGATAGTAGGTCTTGA+AGG 0.461337 7_1:+67309078 Msa1032410:CDS
GCGTGAGGTTCTGGAGTGAT+TGG 0.473186 7_1:-67306674 None:intergenic
CCACTTAAATCCCACCGGTT+CGG 0.474511 7_1:+67306730 Msa1032410:CDS
AGGTGGCGGCGGTGGTGAGA+AGG 0.476821 7_1:-67306648 None:intergenic
CGATTGAATTTCGAGCCAAC+TGG 0.479280 7_1:-67309839 None:intergenic
TGGTCCAGGACCTGCAAAGC+CGG 0.479523 7_1:+67310383 Msa1032410:CDS
ATGAAATTGGTGGGAAATGA+GGG 0.480912 7_1:-67306530 None:intergenic
ACCTACTATCTCATCATCAA+TGG 0.481367 7_1:-67309070 None:intergenic
CCCTTAAAAGGAAACTTGGC+AGG 0.483349 7_1:-67310596 None:intergenic
GTGGCCATCGGAAGAAGATA+AGG 0.488760 7_1:-67306589 None:intergenic
TGGAGTTGAGCCAGTGGATA+CGG 0.491468 7_1:+67309374 Msa1032410:CDS
TGAGAAGGGTTGGGGATGGC+CGG 0.493613 7_1:-67306633 None:intergenic
ATTCCCCTTAAAAGGAAACT+TGG 0.493670 7_1:-67310600 None:intergenic
ATCTTGAACTTGCGGTGCCT+CGG 0.495956 7_1:-67306809 None:intergenic
TATCTATCAGTTTAATCTCC+AGG 0.498081 7_1:+67310535 Msa1032410:three_prime_UTR
CCGCCTCTTACGTCCATCAA+TGG 0.498736 7_1:+67310347 Msa1032410:CDS
GTTGGGGATGGCCGGAATGT+GGG 0.500157 7_1:-67306625 None:intergenic
GCCGGAACAAGAAGCACCAC+AGG 0.504206 7_1:+67310401 Msa1032410:CDS
GTTCGGAGGACGGTGGCCAT+CGG 0.508967 7_1:-67306601 None:intergenic
TGGAAATCCCTTTGATCCAA+TGG 0.509314 7_1:+67309398 Msa1032410:CDS
TTAACTTACCATTGGATCAA+AGG 0.511196 7_1:-67309406 None:intergenic
TCGGTTCAATTCCCACTCCC+CGG 0.511973 7_1:+67306749 Msa1032410:CDS
ATTGAAATTCTAAACTCACT+TGG 0.514285 7_1:+67309354 Msa1032410:CDS
AACTTGACGAACCGGGGAGT+GGG 0.515310 7_1:-67306760 None:intergenic
TCACCATTGATGGACGTAAG+AGG 0.516147 7_1:-67310350 None:intergenic
ATACTTCAAGAATTCAGAAA+GGG 0.518433 7_1:+67310309 Msa1032410:CDS
GGTGGCGGCGGTGGTGAGAA+GGG 0.521742 7_1:-67306647 None:intergenic
GTGGTGAGAAGGGTTGGGGA+TGG 0.524363 7_1:-67306637 None:intergenic
AGGTACTAACTTGACGAACC+GGG 0.524465 7_1:-67306767 None:intergenic
GAGAGCTAAAGCTCAGATCA+AGG 0.525781 7_1:+67309272 Msa1032410:CDS
TGCAGTCAAAGTTGCTGAGT+TGG 0.525898 7_1:+67309032 Msa1032410:CDS
TACAGATGGTGCTGCTGATG+TGG 0.527477 7_1:+67308906 Msa1032410:CDS
GTATCTCCGTCAAAAGCAAA+AGG 0.528487 7_1:-67306787 None:intergenic
AATGAAATTGGTGGGAAATG+AGG 0.537988 7_1:-67306531 None:intergenic
TAACTTGACGAACCGGGGAG+TGG 0.538642 7_1:-67306761 None:intergenic
ATCTCTACCAAAGCAATGCA+AGG 0.540116 7_1:-67310665 None:intergenic
GAGTGGGAATTGAACCGAAC+CGG 0.540147 7_1:-67306744 None:intergenic
GATGATGAGGTCAGCGACGC+TGG 0.540308 7_1:+67308943 Msa1032410:CDS
AATACTATCAGAGGTGAAGC+AGG 0.540458 7_1:-67308973 None:intergenic
TGGCCATCGGAAGAAGATAA+GGG 0.543322 7_1:-67306588 None:intergenic
CAGATCAAGGTGGAGACAGA+GGG 0.544694 7_1:+67309285 Msa1032410:CDS
GTGATTGGAAGAGGTGGCGG+CGG 0.545968 7_1:-67306659 None:intergenic
CATACTTCAAGAATTCAGAA+AGG 0.546520 7_1:+67310308 Msa1032410:CDS
GTGAAGGTATCAGCTGGTCC+AGG 0.550393 7_1:+67310369 Msa1032410:CDS
TTACCCTTATCTTCTTCCGA+TGG 0.550439 7_1:+67306585 Msa1032410:exon
CGACAGAGATCGCCTATCAC+TGG 0.551748 7_1:+67309191 Msa1032410:CDS
GATTCTGATGAATTTGAAGA+TGG 0.552865 7_1:+67310282 Msa1032410:CDS
CACTGGTCACAAATGCTCAA+GGG 0.553819 7_1:+67309208 Msa1032410:CDS
CTTACCAGAACCTGAACCTC+GGG 0.555423 7_1:-67306835 None:intergenic
GGAGTGATTGGAAGAGGTGG+CGG 0.556647 7_1:-67306662 None:intergenic
TCCATTGATGATGAGATAGT+AGG 0.558085 7_1:+67309069 Msa1032410:CDS
GGTTCTGGAGTGATTGGAAG+AGG 0.564346 7_1:-67306668 None:intergenic
TCAGGTACCATGTTTCTGAA+AGG 0.565590 7_1:+67310700 Msa1032410:three_prime_UTR
TGAAGAGGAAATGAAATTGG+TGG 0.565980 7_1:-67306540 None:intergenic
ATGCAGGGGCGCAAACCAGT+TGG 0.567238 7_1:+67309824 Msa1032410:intron
GATAAGGGTAAGGTGGCGAT+TGG 0.570719 7_1:-67306573 None:intergenic
CGGTGGGATTTAAGTGGTGA+AGG 0.570915 7_1:-67306724 None:intergenic
CCGAACCGGTGGGATTTAAG+TGG 0.571186 7_1:-67306730 None:intergenic
GAATGTGGGAGTTCGGAGGA+CGG 0.572182 7_1:-67306611 None:intergenic
TTGGTGACTTGCTCTTCCTG+TGG 0.572297 7_1:-67310417 None:intergenic
ACACTGATTCTCCTAACTCC+AGG 0.573651 7_1:-67310759 None:intergenic
TGGGAATTGAACCGAACCGG+TGG 0.574334 7_1:-67306741 None:intergenic
ATGAGATAGTAGGTCTTGAA+GGG 0.578111 7_1:+67309079 Msa1032410:CDS
GATCAATTGCAACTCACTTG+GGG 0.579091 7_1:-67310724 None:intergenic
TCTTCTTCTGGAGGATGCGA+CGG 0.580174 7_1:-67306701 None:intergenic
ACTTGTACAAAACTGAATCC+AGG 0.580787 7_1:-67310511 None:intergenic
GGATTTCCAACCGTATCCAC+TGG 0.582289 7_1:-67309384 None:intergenic
TCAGATCAAGGTGGAGACAG+AGG 0.582701 7_1:+67309284 Msa1032410:CDS
TTCTACTTAATGTACTCCAA+CGG 0.582945 7_1:+67310868 Msa1032410:three_prime_UTR
TCACTGGTCACAAATGCTCA+AGG 0.585062 7_1:+67309207 Msa1032410:CDS
GAAGAGGAAATGAAATTGGT+GGG 0.586910 7_1:-67306539 None:intergenic
ATCGGAAGAAGATAAGGGTA+AGG 0.587373 7_1:-67306583 None:intergenic
CAGTGATAGGCGATCTCTGT+CGG 0.589421 7_1:-67309190 None:intergenic
GGCAAAGTTGTACTTTCAAG+CGG 0.590604 7_1:-67310490 None:intergenic
GTTGAGCCAGTGGATACGGT+TGG 0.590743 7_1:+67309378 Msa1032410:CDS
TCGGGTGAATCTTGAACTTG+CGG 0.591032 7_1:-67306817 None:intergenic
TCAATGGTGAAGGTATCAGC+TGG 0.597135 7_1:+67310363 Msa1032410:CDS
TGATAACTCTTCGGATAAGG+AGG 0.598835 7_1:-67309109 None:intergenic
CAGGACAGTAAAGAGAATGA+TGG 0.601642 7_1:+67310450 Msa1032410:CDS
ATTGGCGAATTGAGTTGAAG+AGG 0.601924 7_1:-67306555 None:intergenic
GACTGAAGTAATACTATCAG+AGG 0.601933 7_1:-67308982 None:intergenic
GCTGATGTGGAGGAGAGTAC+AGG 0.606308 7_1:+67308919 Msa1032410:CDS
AAATGCTCAAGGGGAAGTTG+TGG 0.607604 7_1:+67309218 Msa1032410:CDS
GGAGAGTACAGGTGATGATG+AGG 0.608475 7_1:+67308930 Msa1032410:CDS
AAAGATCGAAAACTAAGGAT+CGG 0.611204 7_1:+67309138 Msa1032410:CDS
CTTCACCACTTAAATCCCAC+CGG 0.612873 7_1:+67306725 Msa1032410:CDS
TTGGGGTCCTTTCAGAAACA+TGG 0.613633 7_1:-67310707 None:intergenic
AGTCACCAATGAAACTTCCC+AGG 0.615111 7_1:+67310431 Msa1032410:CDS
CAAGTGTTAATGTTAAGCTG+TGG 0.619835 7_1:-67310921 None:intergenic
GATCAAGGTGGAGACAGAGG+GGG 0.620556 7_1:+67309287 Msa1032410:CDS
CTTACGTCCATCAATGGTGA+AGG 0.622403 7_1:+67310353 Msa1032410:CDS
TCTGGAGTGATTGGAAGAGG+TGG 0.625988 7_1:-67306665 None:intergenic
ATTCAACAGGACTCTACAGA+TGG 0.628787 7_1:+67308892 Msa1032410:intron
ACTGGTCACAAATGCTCAAG+GGG 0.630703 7_1:+67309209 Msa1032410:CDS
GCCGGAATGTGGGAGTTCGG+AGG 0.636031 7_1:-67306615 None:intergenic
TGGTGAAGGTCTTCTTCTGG+AGG 0.639079 7_1:-67306710 None:intergenic
CTCACTTGGAGTTGAGCCAG+TGG 0.641190 7_1:+67309368 Msa1032410:CDS
TGTGGGAGTTCGGAGGACGG+TGG 0.642626 7_1:-67306608 None:intergenic
GGATGCGACGGAAACGCGTG+AGG 0.644324 7_1:-67306689 None:intergenic
AGATGGTGCTGCTGATGTGG+AGG 0.644434 7_1:+67308909 Msa1032410:CDS
ACTTACCAGAACCTGAACCT+CGG 0.647885 7_1:-67306836 None:intergenic
GGAAGAAGATAAGGGTAAGG+TGG 0.648207 7_1:-67306580 None:intergenic
ACATGAAGCAATTATGCGTG+AGG 0.649725 7_1:+67310260 Msa1032410:CDS
TCTCTACCAAAGCAATGCAA+GGG 0.657808 7_1:-67310664 None:intergenic
GGTACTAACTTGACGAACCG+GGG 0.661706 7_1:-67306766 None:intergenic
GGGAATTGAACCGAACCGGT+GGG 0.665597 7_1:-67306740 None:intergenic
AGATCAAGGTGGAGACAGAG+GGG 0.666460 7_1:+67309286 Msa1032410:CDS
CCATTGATGGACGTAAGAGG+CGG 0.691889 7_1:-67310347 None:intergenic
GCAAGTTCAAGATTCACCCG+AGG 0.716027 7_1:+67306819 Msa1032410:CDS
AGCTAAAGCTCAGATCAAGG+TGG 0.719934 7_1:+67309275 Msa1032410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAACATAATACTA+AGG + chr7_1:67308283-67308302 Msa1032410:intron 10.0%
!!! AAATATAAATTACAAGATTT+TGG + chr7_1:67308334-67308353 Msa1032410:intron 10.0%
!!! TTGTTTTTTTTTTTTTTTGA+GGG + chr7_1:67308760-67308779 Msa1032410:intron 10.0%
!! TTTGTAATTAAAACAGAAAA+TGG + chr7_1:67307382-67307401 Msa1032410:intron 15.0%
!! TTGTAATTAAAACAGAAAAT+GGG + chr7_1:67307383-67307402 Msa1032410:intron 15.0%
!!! ATGGTTTAAAATTTTGAATT+GGG + chr7_1:67307582-67307601 Msa1032410:intron 15.0%
!! AATCTTGTAATTTATATTTG+TGG - chr7_1:67308333-67308352 None:intergenic 15.0%
!! AAAATGAATATAACTATTTG+GGG - chr7_1:67308373-67308392 None:intergenic 15.0%
!! GAAAATGAATATAACTATTT+GGG - chr7_1:67308374-67308393 None:intergenic 15.0%
!! TGAAAATGAATATAACTATT+TGG - chr7_1:67308375-67308394 None:intergenic 15.0%
!!! ATTTAAAATGTCTCTAAATT+AGG - chr7_1:67308626-67308645 None:intergenic 15.0%
!! ATTACTATTATTATTGTTGT+TGG + chr7_1:67308720-67308739 Msa1032410:intron 15.0%
!!! GTTGTTTTTTTTTTTTTTTG+AGG + chr7_1:67308759-67308778 Msa1032410:intron 15.0%
!!! TAAATTTCTTTTTTTGCAAA+TGG + chr7_1:67309537-67309556 Msa1032410:intron 15.0%
!! TAAGACAATGTAAATATAAA+AGG - chr7_1:67309578-67309597 None:intergenic 15.0%
!! CATAGTTGTTAATTAGAAAA+AGG + chr7_1:67306963-67306982 Msa1032410:intron 20.0%
!! TTAATTACAAAAATCTCTTC+TGG - chr7_1:67307373-67307392 None:intergenic 20.0%
!! ATCGGAAAAATTAAAATCAA+AGG + chr7_1:67307407-67307426 Msa1032410:intron 20.0%
!! TCGGAAAAATTAAAATCAAA+GGG + chr7_1:67307408-67307427 Msa1032410:intron 20.0%
!!! TTGTTATGTTTTTATTGCAT+TGG + chr7_1:67307525-67307544 Msa1032410:intron 20.0%
!!! CATGGTTTAAAATTTTGAAT+TGG + chr7_1:67307581-67307600 Msa1032410:intron 20.0%
!! GTTTGAATTCAAAATCTTAA+TGG - chr7_1:67307867-67307886 None:intergenic 20.0%
!!! TTATAGAACTACAAAGTTTT+AGG + chr7_1:67308133-67308152 Msa1032410:intron 20.0%
!!! GTTATTTATGATTTCTTTTG+TGG + chr7_1:67308817-67308836 Msa1032410:intron 20.0%
!!! TTTTTCTATTGATAACTCTT+CGG - chr7_1:67309121-67309140 None:intergenic 20.0%
!!! GTTAAAGAATTATTTTCAGT+TGG + chr7_1:67310062-67310081 Msa1032410:intron 20.0%
!! AAATTATCTAAAAAAACCGT+TGG - chr7_1:67310887-67310906 None:intergenic 20.0%
!!! TCAGTAGTTTTGTATTTGTT+TGG + chr7_1:67307058-67307077 Msa1032410:intron 25.0%
! TTAAAACAGAAAATGGGAAT+CGG + chr7_1:67307389-67307408 Msa1032410:intron 25.0%
! CGGAAAAATTAAAATCAAAG+GGG + chr7_1:67307409-67307428 Msa1032410:intron 25.0%
!! AATTCCAATTTGGAATTTCT+AGG - chr7_1:67308115-67308134 None:intergenic 25.0%
!! GTAGTTCTATAATTCCAATT+TGG - chr7_1:67308125-67308144 None:intergenic 25.0%
! TATTTGTGGTTTCTGTTTAT+GGG - chr7_1:67308319-67308338 None:intergenic 25.0%
! ATATTTGTGGTTTCTGTTTA+TGG - chr7_1:67308320-67308339 None:intergenic 25.0%
!! ACCTTGAAAGAAAGTATATA+AGG + chr7_1:67308449-67308468 Msa1032410:intron 25.0%
! TCCTTATATACTTTCTTTCA+AGG - chr7_1:67308453-67308472 None:intergenic 25.0%
!! AGAAAGTATATAAGGATGTT+TGG + chr7_1:67308457-67308476 Msa1032410:intron 25.0%
!! ATATACAAGCACAGTATTTT+TGG - chr7_1:67308548-67308567 None:intergenic 25.0%
!! ACTATTATTATTGTTGTTGG+TGG + chr7_1:67308723-67308742 Msa1032410:intron 25.0%
! TAGAAAAAGATCGAAAACTA+AGG + chr7_1:67309133-67309152 Msa1032410:CDS 25.0%
! ATTGAAATTCTAAACTCACT+TGG + chr7_1:67309354-67309373 Msa1032410:CDS 25.0%
! ATTCATGATTAACTTACCAT+TGG - chr7_1:67309417-67309436 None:intergenic 25.0%
! AGAAAATCTTATTATCATGC+AGG + chr7_1:67309485-67309504 Msa1032410:intron 25.0%
! GAAATTTATCAGCTTCATTA+CGG - chr7_1:67309525-67309544 None:intergenic 25.0%
! GACAAAAATTATACTTCATG+AGG - chr7_1:67309686-67309705 None:intergenic 25.0%
!!! TAAGAGATTTTTCAGAGAAT+GGG - chr7_1:67309735-67309754 None:intergenic 25.0%
!!! TTAAGAGATTTTTCAGAGAA+TGG - chr7_1:67309736-67309755 None:intergenic 25.0%
! AAAATATAAACGAAAGAGGT+CGG - chr7_1:67309778-67309797 None:intergenic 25.0%
!! ACCTCTTTCGTTTATATTTT+TGG + chr7_1:67309778-67309797 Msa1032410:intron 25.0%
! TTACACGTTTCTTAAGATAT+AGG + chr7_1:67310175-67310194 Msa1032410:intron 25.0%
! ATACTTCAAGAATTCAGAAA+GGG + chr7_1:67310309-67310328 Msa1032410:CDS 25.0%
! TAATACTAATTCCCCTTAAA+AGG - chr7_1:67310611-67310630 None:intergenic 25.0%
AGTTGAAGAGGAAATGAAAT+TGG - chr7_1:67306546-67306565 None:intergenic 30.0%
!! TTAGTACCTTTTGCTTTTGA+CGG + chr7_1:67306781-67306800 Msa1032410:CDS 30.0%
TCAACTATTAGGTTAAGCTT+TGG + chr7_1:67307027-67307046 Msa1032410:intron 30.0%
!!! GTAGTTTTGTATTTGTTTGG+AGG + chr7_1:67307061-67307080 Msa1032410:intron 30.0%
TTGATATTGCGACAAATAGT+AGG + chr7_1:67307164-67307183 Msa1032410:intron 30.0%
TGATATTGCGACAAATAGTA+GGG + chr7_1:67307165-67307184 Msa1032410:intron 30.0%
! AATTTGTTTCTTGCTCTCAA+AGG - chr7_1:67307345-67307364 None:intergenic 30.0%
TTTGAGAGCAAGAAACAAAT+TGG + chr7_1:67307344-67307363 Msa1032410:intron 30.0%
TATATCACTAACAAAACGTG+TGG + chr7_1:67307478-67307497 Msa1032410:intron 30.0%
TACTAACTATTAGCAAAGAG+TGG + chr7_1:67307640-67307659 Msa1032410:intron 30.0%
! ATGAAAATGACTCCTTTTTC+TGG + chr7_1:67307692-67307711 Msa1032410:intron 30.0%
ATCTTAATGGTTTAGACAAC+AGG - chr7_1:67307854-67307873 None:intergenic 30.0%
ATCTGTAGTCTCCATTTAAT+GGG + chr7_1:67307965-67307984 Msa1032410:intron 30.0%
!! TCTTTGGATTAGCTTATTAC+AGG - chr7_1:67308080-67308099 None:intergenic 30.0%
! ATTTGGAATTTCTAGGAGAT+TGG - chr7_1:67308108-67308127 None:intergenic 30.0%
ATCTCCTAGAAATTCCAAAT+TGG + chr7_1:67308108-67308127 Msa1032410:intron 30.0%
TTTAAAGAAACCAAGTTACC+AGG + chr7_1:67308162-67308181 Msa1032410:intron 30.0%
TTAAAGAAACCAAGTTACCA+GGG + chr7_1:67308163-67308182 Msa1032410:intron 30.0%
TTCTTTCAAGGTTGTTAACA+GGG - chr7_1:67308441-67308460 None:intergenic 30.0%
TTTCTTTCAAGGTTGTTAAC+AGG - chr7_1:67308442-67308461 None:intergenic 30.0%
AGAAAAGATATTGAGAGAGA+TGG - chr7_1:67308516-67308535 None:intergenic 30.0%
! GAGTTACTAAGCTTTAACTA+AGG - chr7_1:67308658-67308677 None:intergenic 30.0%
AAGCTTAGTAACTCAAACAA+AGG + chr7_1:67308664-67308683 Msa1032410:intron 30.0%
ACTCAAACAAAGGAAATAGT+TGG + chr7_1:67308674-67308693 Msa1032410:intron 30.0%
CTCAAACAAAGGAAATAGTT+GGG + chr7_1:67308675-67308694 Msa1032410:intron 30.0%
CCAGCAAATTAACATAAACA+AGG - chr7_1:67308865-67308884 None:intergenic 30.0%
!! CCTTGTTTATGTTAATTTGC+TGG + chr7_1:67308862-67308881 Msa1032410:intron 30.0%
! TATTGATAACTCTTCGGATA+AGG - chr7_1:67309115-67309134 None:intergenic 30.0%
AAAGATCGAAAACTAAGGAT+CGG + chr7_1:67309138-67309157 Msa1032410:CDS 30.0%
CTCTCAAAATTATCCAATAC+AGG - chr7_1:67309255-67309274 None:intergenic 30.0%
TAACTTACCATTGGATCAAA+GGG - chr7_1:67309408-67309427 None:intergenic 30.0%
TTAACTTACCATTGGATCAA+AGG - chr7_1:67309409-67309428 None:intergenic 30.0%
TACCTGTCTTTCAATATTGT+TGG + chr7_1:67309599-67309618 Msa1032410:intron 30.0%
GCCAAAAATATAAACGAAAG+AGG - chr7_1:67309782-67309801 None:intergenic 30.0%
TGTCATCTATGATTTATGCA+GGG + chr7_1:67309809-67309828 Msa1032410:intron 30.0%
ACACTATATCAAGTTTCTTC+AGG + chr7_1:67309884-67309903 Msa1032410:intron 30.0%
!! TAAGAGTTAAAAGTGTTTCC+AGG - chr7_1:67309921-67309940 None:intergenic 30.0%
GATTCTGATGAATTTGAAGA+TGG + chr7_1:67310282-67310301 Msa1032410:CDS 30.0%
CATACTTCAAGAATTCAGAA+AGG + chr7_1:67310308-67310327 Msa1032410:CDS 30.0%
!!! TTCAGAAAGGGTTTTAAACT+TGG + chr7_1:67310321-67310340 Msa1032410:CDS 30.0%
TATCTATCAGTTTAATCTCC+AGG + chr7_1:67310535-67310554 Msa1032410:three_prime_UTR 30.0%
! AGAGATGACTAAATTTTCTC+AGG + chr7_1:67310682-67310701 Msa1032410:three_prime_UTR 30.0%
AGCACACATTATGTATTCTT+TGG + chr7_1:67310830-67310849 Msa1032410:intron 30.0%
TTCTACTTAATGTACTCCAA+CGG + chr7_1:67310868-67310887 Msa1032410:three_prime_UTR 30.0%
ATGAAATTGGTGGGAAATGA+GGG - chr7_1:67306533-67306552 None:intergenic 35.0%
AATGAAATTGGTGGGAAATG+AGG - chr7_1:67306534-67306553 None:intergenic 35.0%
GAAGAGGAAATGAAATTGGT+GGG - chr7_1:67306542-67306561 None:intergenic 35.0%
TGAAGAGGAAATGAAATTGG+TGG - chr7_1:67306543-67306562 None:intergenic 35.0%
CTGCTACAGAATCAACTATT+AGG + chr7_1:67307016-67307035 Msa1032410:intron 35.0%
!! CCTCTAAAGCCTTTATGTTA+CGG + chr7_1:67307237-67307256 Msa1032410:intron 35.0%
!! CTCTAAAGCCTTTATGTTAC+GGG + chr7_1:67307238-67307257 Msa1032410:intron 35.0%
!! CAAAGGGGAATTTGTTTTTC+TGG + chr7_1:67307424-67307443 Msa1032410:intron 35.0%
ATTGGCTATCCTGTATTGTA+AGG + chr7_1:67307543-67307562 Msa1032410:intron 35.0%
TTGGCTATCCTGTATTGTAA+GGG + chr7_1:67307544-67307563 Msa1032410:intron 35.0%
CTAATAGTTAGTAACCTACC+TGG - chr7_1:67307633-67307652 None:intergenic 35.0%
AGTACAGTTACACCAGAAAA+AGG - chr7_1:67307707-67307726 None:intergenic 35.0%
! CACTTGTTTGAGCTTCTTTT+TGG + chr7_1:67307800-67307819 Msa1032410:intron 35.0%
CATCTGTAGTCTCCATTTAA+TGG + chr7_1:67307964-67307983 Msa1032410:intron 35.0%
AGTCTCCATTTAATGGGAAA+AGG + chr7_1:67307971-67307990 Msa1032410:intron 35.0%
! CAAAGCCTTTTCCCATTAAA+TGG - chr7_1:67307979-67307998 None:intergenic 35.0%
GGTTCAAGTAAACTTATGGA+GGG - chr7_1:67308420-67308439 None:intergenic 35.0%
ACAGGGTTCAAGTAAACTTA+TGG - chr7_1:67308424-67308443 None:intergenic 35.0%
GACTGAAGTAATACTATCAG+AGG - chr7_1:67308985-67309004 None:intergenic 35.0%
!! TCCATTGATGATGAGATAGT+AGG + chr7_1:67309069-67309088 Msa1032410:CDS 35.0%
ACCTACTATCTCATCATCAA+TGG - chr7_1:67309073-67309092 None:intergenic 35.0%
ATGAGATAGTAGGTCTTGAA+GGG + chr7_1:67309079-67309098 Msa1032410:CDS 35.0%
GTGCAGACTTTGACAATTAT+CGG + chr7_1:67309160-67309179 Msa1032410:CDS 35.0%
TCTCTGTGTAGAAAGAAAGA+AGG - chr7_1:67309468-67309487 None:intergenic 35.0%
CTGTCTTTCAATATTGTTGG+CGG + chr7_1:67309602-67309621 Msa1032410:intron 35.0%
CTGTCATCTATGATTTATGC+AGG + chr7_1:67309808-67309827 Msa1032410:intron 35.0%
GTCATCTATGATTTATGCAG+GGG + chr7_1:67309810-67309829 Msa1032410:intron 35.0%
CATTCTTAAACTCACCAAGT+TGG - chr7_1:67309965-67309984 None:intergenic 35.0%
ACTGCCTCAAATGAAACATT+TGG + chr7_1:67310125-67310144 Msa1032410:intron 35.0%
AGCACCAAATGTTTCATTTG+AGG - chr7_1:67310132-67310151 None:intergenic 35.0%
!! CAAATGAAACATTTGGTGCT+TGG + chr7_1:67310132-67310151 Msa1032410:intron 35.0%
ATCATTCTCTTTACTGTCCT+GGG - chr7_1:67310451-67310470 None:intergenic 35.0%
ACTTGTACAAAACTGAATCC+AGG - chr7_1:67310514-67310533 None:intergenic 35.0%
AATCTCCAGGAACGTAATTA+TGG + chr7_1:67310548-67310567 Msa1032410:three_prime_UTR 35.0%
ATCTCCAGGAACGTAATTAT+GGG + chr7_1:67310549-67310568 Msa1032410:three_prime_UTR 35.0%
ATTCCCCTTAAAAGGAAACT+TGG - chr7_1:67310603-67310622 None:intergenic 35.0%
TGATCAATTGCAACTCACTT+GGG - chr7_1:67310728-67310747 None:intergenic 35.0%
TTGATCAATTGCAACTCACT+TGG - chr7_1:67310729-67310748 None:intergenic 35.0%
GTTGCAATTGATCAAGTGTT+TGG + chr7_1:67310734-67310753 Msa1032410:three_prime_UTR 35.0%
!! ATTGGCGAATTGAGTTGAAG+AGG - chr7_1:67306558-67306577 None:intergenic 40.0%
ATCGGAAGAAGATAAGGGTA+AGG - chr7_1:67306586-67306605 None:intergenic 40.0%
TTACCCTTATCTTCTTCCGA+TGG + chr7_1:67306585-67306604 Msa1032410:exon 40.0%
! AAGGTACTAACTTGACGAAC+CGG - chr7_1:67306771-67306790 None:intergenic 40.0%
GTATCTCCGTCAAAAGCAAA+AGG - chr7_1:67306790-67306809 None:intergenic 40.0%
! CCGTAACATAAAGGCTTTAG+AGG - chr7_1:67307240-67307259 None:intergenic 40.0%
CAATTGCTCCCGTAACATAA+AGG - chr7_1:67307249-67307268 None:intergenic 40.0%
ACTAACAAAACGTGTGGAAG+TGG + chr7_1:67307484-67307503 Msa1032410:intron 40.0%
TGGCTATCCTGTATTGTAAG+GGG + chr7_1:67307545-67307564 Msa1032410:intron 40.0%
TTGGGTGTAGAAGTGATGTA+AGG + chr7_1:67307600-67307619 Msa1032410:intron 40.0%
TGGGTGTAGAAGTGATGTAA+GGG + chr7_1:67307601-67307620 Msa1032410:intron 40.0%
CTATTAGCAAAGAGTGGAGA+AGG + chr7_1:67307646-67307665 Msa1032410:intron 40.0%
!!! TTTTTTGTCAGCTTCTCGAG+AGG - chr7_1:67308042-67308061 None:intergenic 40.0%
TAGGAGATTGGATGCATCTT+TGG - chr7_1:67308096-67308115 None:intergenic 40.0%
TGTGCTAAGGTTTACGATTC+AGG - chr7_1:67308196-67308215 None:intergenic 40.0%
GGGTTCAAGTAAACTTATGG+AGG - chr7_1:67308421-67308440 None:intergenic 40.0%
TCTGTAGAGTCCTGTTGAAT+TGG - chr7_1:67308892-67308911 None:intergenic 40.0%
ATTCAACAGGACTCTACAGA+TGG + chr7_1:67308892-67308911 Msa1032410:intron 40.0%
AATACTATCAGAGGTGAAGC+AGG - chr7_1:67308976-67308995 None:intergenic 40.0%
GATGAGATAGTAGGTCTTGA+AGG + chr7_1:67309078-67309097 Msa1032410:CDS 40.0%
TGATAACTCTTCGGATAAGG+AGG - chr7_1:67309112-67309131 None:intergenic 40.0%
TGGAAATCCCTTTGATCCAA+TGG + chr7_1:67309398-67309417 Msa1032410:CDS 40.0%
CGCCAACAATATTGAAAGAC+AGG - chr7_1:67309604-67309623 None:intergenic 40.0%
! TTGTTGGCGGTCAATGTTTT+TGG + chr7_1:67309615-67309634 Msa1032410:intron 40.0%
!! AAAAGTGTTTCCAGGTCTTC+AGG - chr7_1:67309913-67309932 None:intergenic 40.0%
TCACAGAGTCGAGAAAAAGT+AGG + chr7_1:67309987-67310006 Msa1032410:intron 40.0%
ACATGAAGCAATTATGCGTG+AGG + chr7_1:67310260-67310279 Msa1032410:CDS 40.0%
CATCATTCTCTTTACTGTCC+TGG - chr7_1:67310452-67310471 None:intergenic 40.0%
CAGGACAGTAAAGAGAATGA+TGG + chr7_1:67310450-67310469 Msa1032410:CDS 40.0%
GGCAAAGTTGTACTTTCAAG+CGG - chr7_1:67310493-67310512 None:intergenic 40.0%
! CTTGAAAGTACAACTTTGCC+TGG + chr7_1:67310493-67310512 Msa1032410:exon 40.0%
AACACCCATAATTACGTTCC+TGG - chr7_1:67310556-67310575 None:intergenic 40.0%
! TCCTGCCAAGTTTCCTTTTA+AGG + chr7_1:67310595-67310614 Msa1032410:three_prime_UTR 40.0%
! CCTGCCAAGTTTCCTTTTAA+GGG + chr7_1:67310596-67310615 Msa1032410:three_prime_UTR 40.0%
! CTGCCAAGTTTCCTTTTAAG+GGG + chr7_1:67310597-67310616 Msa1032410:three_prime_UTR 40.0%
TTTATGCCCTTGCATTGCTT+TGG + chr7_1:67310658-67310677 Msa1032410:three_prime_UTR 40.0%
TCTCTACCAAAGCAATGCAA+GGG - chr7_1:67310667-67310686 None:intergenic 40.0%
ATCTCTACCAAAGCAATGCA+AGG - chr7_1:67310668-67310687 None:intergenic 40.0%
! TCAGGTACCATGTTTCTGAA+AGG + chr7_1:67310700-67310719 Msa1032410:three_prime_UTR 40.0%
GATCAATTGCAACTCACTTG+GGG - chr7_1:67310727-67310746 None:intergenic 40.0%
GGAAGAAGATAAGGGTAAGG+TGG - chr7_1:67306583-67306602 None:intergenic 45.0%
TGGCCATCGGAAGAAGATAA+GGG - chr7_1:67306591-67306610 None:intergenic 45.0%
AAGTGGTGAAGGTCTTCTTC+TGG - chr7_1:67306716-67306735 None:intergenic 45.0%
CTTCACCACTTAAATCCCAC+CGG + chr7_1:67306725-67306744 Msa1032410:CDS 45.0%
AGGTACTAACTTGACGAACC+GGG - chr7_1:67306770-67306789 None:intergenic 45.0%
TCGGGTGAATCTTGAACTTG+CGG - chr7_1:67306820-67306839 None:intergenic 45.0%
ACTTACCAGAACCTGAACCT+CGG - chr7_1:67306839-67306858 None:intergenic 45.0%
AACAAAACGTGTGGAAGTGG+TGG + chr7_1:67307487-67307506 Msa1032410:intron 45.0%
TCACAGACCCCTTACAATAC+AGG - chr7_1:67307555-67307574 None:intergenic 45.0%
CAAGTGTGCACTACGTTGTA+AGG - chr7_1:67307786-67307805 None:intergenic 45.0%
!! GGCGTTGGTAATATGTGCTA+AGG - chr7_1:67308209-67308228 None:intergenic 45.0%
CAAGGACTCGTGATGCTAAT+GGG - chr7_1:67308234-67308253 None:intergenic 45.0%
CATTAGCATCACGAGTCCTT+GGG + chr7_1:67308233-67308252 Msa1032410:intron 45.0%
ATTAGCATCACGAGTCCTTG+GGG + chr7_1:67308234-67308253 Msa1032410:intron 45.0%
TGCTGGTACACCAATTCAAC+AGG + chr7_1:67308879-67308898 Msa1032410:intron 45.0%
TGCAGTCAAAGTTGCTGAGT+TGG + chr7_1:67309032-67309051 Msa1032410:CDS 45.0%
GAGCATTTGTGACCAGTGAT+AGG - chr7_1:67309206-67309225 None:intergenic 45.0%
TCACTGGTCACAAATGCTCA+AGG + chr7_1:67309207-67309226 Msa1032410:CDS 45.0%
CACTGGTCACAAATGCTCAA+GGG + chr7_1:67309208-67309227 Msa1032410:CDS 45.0%
ACTGGTCACAAATGCTCAAG+GGG + chr7_1:67309209-67309228 Msa1032410:CDS 45.0%
AAATGCTCAAGGGGAAGTTG+TGG + chr7_1:67309218-67309237 Msa1032410:CDS 45.0%
!! GGAGAGTTTGTTGCCTGTAT+TGG + chr7_1:67309239-67309258 Msa1032410:CDS 45.0%
GAGAGCTAAAGCTCAGATCA+AGG + chr7_1:67309272-67309291 Msa1032410:CDS 45.0%
AGCTAAAGCTCAGATCAAGG+TGG + chr7_1:67309275-67309294 Msa1032410:CDS 45.0%
!!! TTGGCGGTCAATGTTTTTGG+TGG + chr7_1:67309618-67309637 Msa1032410:intron 45.0%
CGATTGAATTTCGAGCCAAC+TGG - chr7_1:67309842-67309861 None:intergenic 45.0%
TCGATTGTTTCGAGCCAACT+TGG + chr7_1:67309948-67309967 Msa1032410:intron 45.0%
! TTCATTTGAGGCAGTAGCTG+AGG - chr7_1:67310120-67310139 None:intergenic 45.0%
! TCACCATTGATGGACGTAAG+AGG - chr7_1:67310353-67310372 None:intergenic 45.0%
CTTACGTCCATCAATGGTGA+AGG + chr7_1:67310353-67310372 Msa1032410:CDS 45.0%
GCTGATACCTTCACCATTGA+TGG - chr7_1:67310363-67310382 None:intergenic 45.0%
!! TCAATGGTGAAGGTATCAGC+TGG + chr7_1:67310363-67310382 Msa1032410:CDS 45.0%
AGTCACCAATGAAACTTCCC+AGG + chr7_1:67310431-67310450 Msa1032410:CDS 45.0%
ACTGTCCTGGGAAGTTTCAT+TGG - chr7_1:67310439-67310458 None:intergenic 45.0%
CCCTTAAAAGGAAACTTGGC+AGG - chr7_1:67310599-67310618 None:intergenic 45.0%
TTGGGGTCCTTTCAGAAACA+TGG - chr7_1:67310710-67310729 None:intergenic 45.0%
TTGATCAAGTGTTTGGCACC+TGG + chr7_1:67310741-67310760 Msa1032410:three_prime_UTR 45.0%
!! ACACTGATTCTCCTAACTCC+AGG - chr7_1:67310762-67310781 None:intergenic 45.0%
GATAAGGGTAAGGTGGCGAT+TGG - chr7_1:67306576-67306595 None:intergenic 50.0%
GTGGCCATCGGAAGAAGATA+AGG - chr7_1:67306592-67306611 None:intergenic 50.0%
! TCTGGAGTGATTGGAAGAGG+TGG - chr7_1:67306668-67306687 None:intergenic 50.0%
!! GGTTCTGGAGTGATTGGAAG+AGG - chr7_1:67306671-67306690 None:intergenic 50.0%
! TCTTCTTCTGGAGGATGCGA+CGG - chr7_1:67306704-67306723 None:intergenic 50.0%
TGGTGAAGGTCTTCTTCTGG+AGG - chr7_1:67306713-67306732 None:intergenic 50.0%
CGGTGGGATTTAAGTGGTGA+AGG - chr7_1:67306727-67306746 None:intergenic 50.0%
! CCACTTAAATCCCACCGGTT+CGG + chr7_1:67306730-67306749 Msa1032410:CDS 50.0%
GAGTGGGAATTGAACCGAAC+CGG - chr7_1:67306747-67306766 None:intergenic 50.0%
GGTACTAACTTGACGAACCG+GGG - chr7_1:67306769-67306788 None:intergenic 50.0%
! TGCTTTTGACGGAGATACCG+AGG + chr7_1:67306792-67306811 Msa1032410:CDS 50.0%
ATCTTGAACTTGCGGTGCCT+CGG - chr7_1:67306812-67306831 None:intergenic 50.0%
GCAAGTTCAAGATTCACCCG+AGG + chr7_1:67306819-67306838 Msa1032410:CDS 50.0%
TCAAGATTCACCCGAGGTTC+AGG + chr7_1:67306825-67306844 Msa1032410:CDS 50.0%
CTTACCAGAACCTGAACCTC+GGG - chr7_1:67306838-67306857 None:intergenic 50.0%
!! GGCTTTAGAGGTGTCTGCAA+CGG - chr7_1:67307228-67307247 None:intergenic 50.0%
AGGGGTCTGTGAGCAATACA+TGG + chr7_1:67307563-67307582 Msa1032410:intron 50.0%
GTGATGTAAGGGTAGAGTCC+AGG + chr7_1:67307612-67307631 Msa1032410:intron 50.0%
TGTAAGGGTAGAGTCCAGGT+AGG + chr7_1:67307616-67307635 Msa1032410:intron 50.0%
GCAAAGAGTGGAGAAGGATC+TGG + chr7_1:67307652-67307671 Msa1032410:intron 50.0%
AAGAGTGGAGAAGGATCTGG+CGG + chr7_1:67307655-67307674 Msa1032410:intron 50.0%
GGAGTTGTTCCCTGGTAACT+TGG - chr7_1:67308175-67308194 None:intergenic 50.0%
ACGATTCAGGAGTTGTTCCC+TGG - chr7_1:67308183-67308202 None:intergenic 50.0%
CCAAGGACTCGTGATGCTAA+TGG - chr7_1:67308235-67308254 None:intergenic 50.0%
CCATTAGCATCACGAGTCCT+TGG + chr7_1:67308232-67308251 Msa1032410:intron 50.0%
TTAGCATCACGAGTCCTTGG+GGG + chr7_1:67308235-67308254 Msa1032410:intron 50.0%
CTAGTACTTGTAAGCCCCCA+AGG - chr7_1:67308252-67308271 None:intergenic 50.0%
!! TACAGATGGTGCTGCTGATG+TGG + chr7_1:67308906-67308925 Msa1032410:CDS 50.0%
! GGAGAGTACAGGTGATGATG+AGG + chr7_1:67308930-67308949 Msa1032410:CDS 50.0%
CAGTGATAGGCGATCTCTGT+CGG - chr7_1:67309193-67309212 None:intergenic 50.0%
TCAGATCAAGGTGGAGACAG+AGG + chr7_1:67309284-67309303 Msa1032410:CDS 50.0%
CAGATCAAGGTGGAGACAGA+GGG + chr7_1:67309285-67309304 Msa1032410:CDS 50.0%
AGATCAAGGTGGAGACAGAG+GGG + chr7_1:67309286-67309305 Msa1032410:CDS 50.0%
TGGAGTTGAGCCAGTGGATA+CGG + chr7_1:67309374-67309393 Msa1032410:CDS 50.0%
GGATTTCCAACCGTATCCAC+TGG - chr7_1:67309387-67309406 None:intergenic 50.0%
! CTTCAGGTTTCCTGAAGACC+TGG + chr7_1:67309900-67309919 Msa1032410:intron 50.0%
! CCATTGATGGACGTAAGAGG+CGG - chr7_1:67310350-67310369 None:intergenic 50.0%
TCCTGTGGTGCTTCTTGTTC+CGG - chr7_1:67310405-67310424 None:intergenic 50.0%
!! TTGGTGACTTGCTCTTCCTG+TGG - chr7_1:67310420-67310439 None:intergenic 50.0%
AGTGTTTGGCACCTGGAGTT+AGG + chr7_1:67310748-67310767 Msa1032410:three_prime_UTR 50.0%
GAATGTGGGAGTTCGGAGGA+CGG - chr7_1:67306614-67306633 None:intergenic 55.0%
TCCTCCGAACTCCCACATTC+CGG + chr7_1:67306614-67306633 Msa1032410:CDS 55.0%
ATGGCCGGAATGTGGGAGTT+CGG - chr7_1:67306621-67306640 None:intergenic 55.0%
GGAGTGATTGGAAGAGGTGG+CGG - chr7_1:67306665-67306684 None:intergenic 55.0%
!! GCGTGAGGTTCTGGAGTGAT+TGG - chr7_1:67306677-67306696 None:intergenic 55.0%
CCGAACCGGTGGGATTTAAG+TGG - chr7_1:67306733-67306752 None:intergenic 55.0%
GGGAATTGAACCGAACCGGT+GGG - chr7_1:67306743-67306762 None:intergenic 55.0%
TGGGAATTGAACCGAACCGG+TGG - chr7_1:67306744-67306763 None:intergenic 55.0%
TCGGTTCAATTCCCACTCCC+CGG + chr7_1:67306749-67306768 Msa1032410:CDS 55.0%
AACTTGACGAACCGGGGAGT+GGG - chr7_1:67306763-67306782 None:intergenic 55.0%
TAACTTGACGAACCGGGGAG+TGG - chr7_1:67306764-67306783 None:intergenic 55.0%
! TTCACCCGAGGTTCAGGTTC+TGG + chr7_1:67306831-67306850 Msa1032410:CDS 55.0%
!! CGGTGTCGCAACTGCAATTG+CGG - chr7_1:67307208-67307227 None:intergenic 55.0%
!! TGATGCTAATGGGCTGGCGT+TGG - chr7_1:67308224-67308243 None:intergenic 55.0%
! GACTCGTGATGCTAATGGGC+TGG - chr7_1:67308230-67308249 None:intergenic 55.0%
!! AGATGGTGCTGCTGATGTGG+AGG + chr7_1:67308909-67308928 Msa1032410:CDS 55.0%
! GCTGATGTGGAGGAGAGTAC+AGG + chr7_1:67308919-67308938 Msa1032410:CDS 55.0%
CGACAGAGATCGCCTATCAC+TGG + chr7_1:67309191-67309210 Msa1032410:CDS 55.0%
GATCAAGGTGGAGACAGAGG+GGG + chr7_1:67309287-67309306 Msa1032410:CDS 55.0%
CTCACTTGGAGTTGAGCCAG+TGG + chr7_1:67309368-67309387 Msa1032410:CDS 55.0%
GTTGAGCCAGTGGATACGGT+TGG + chr7_1:67309378-67309397 Msa1032410:CDS 55.0%
CCGCCTCTTACGTCCATCAA+TGG + chr7_1:67310347-67310366 Msa1032410:CDS 55.0%
!! GTGAAGGTATCAGCTGGTCC+AGG + chr7_1:67310369-67310388 Msa1032410:CDS 55.0%
GCTTCTTGTTCCGGCTTTGC+AGG - chr7_1:67310396-67310415 None:intergenic 55.0%
GTTGGGGATGGCCGGAATGT+GGG - chr7_1:67306628-67306647 None:intergenic 60.0%
TGAGAAGGGTTGGGGATGGC+CGG - chr7_1:67306636-67306655 None:intergenic 60.0%
GTGGTGAGAAGGGTTGGGGA+TGG - chr7_1:67306640-67306659 None:intergenic 60.0%
! GTGATTGGAAGAGGTGGCGG+CGG - chr7_1:67306662-67306681 None:intergenic 60.0%
GACGGAAACGCGTGAGGTTC+TGG - chr7_1:67306686-67306705 None:intergenic 60.0%
GATGATGAGGTCAGCGACGC+TGG + chr7_1:67308943-67308962 Msa1032410:CDS 60.0%
! ATGCAGGGGCGCAAACCAGT+TGG + chr7_1:67309824-67309843 Msa1032410:intron 60.0%
TGGTCCAGGACCTGCAAAGC+CGG + chr7_1:67310383-67310402 Msa1032410:CDS 60.0%
TGTTCCGGCTTTGCAGGTCC+TGG - chr7_1:67310390-67310409 None:intergenic 60.0%
!! GCCGGAACAAGAAGCACCAC+AGG + chr7_1:67310401-67310420 Msa1032410:CDS 60.0%
GTTCGGAGGACGGTGGCCAT+CGG - chr7_1:67306604-67306623 None:intergenic 65.0%
TGTGGGAGTTCGGAGGACGG+TGG - chr7_1:67306611-67306630 None:intergenic 65.0%
GCCGGAATGTGGGAGTTCGG+AGG - chr7_1:67306618-67306637 None:intergenic 65.0%
GGTTGGGGATGGCCGGAATG+TGG - chr7_1:67306629-67306648 None:intergenic 65.0%
GGCGGTGGTGAGAAGGGTTG+GGG - chr7_1:67306644-67306663 None:intergenic 65.0%
CGGCGGTGGTGAGAAGGGTT+GGG - chr7_1:67306645-67306664 None:intergenic 65.0%
! ATTGGAAGAGGTGGCGGCGG+TGG - chr7_1:67306659-67306678 None:intergenic 65.0%
GGATGCGACGGAAACGCGTG+AGG - chr7_1:67306692-67306711 None:intergenic 65.0%
CAAGGTGGAGACAGAGGGGG+AGG + chr7_1:67309290-67309309 Msa1032410:CDS 65.0%
GCGGCGGTGGTGAGAAGGGT+TGG - chr7_1:67306646-67306665 None:intergenic 70.0%
! GGTGGCGGCGGTGGTGAGAA+GGG - chr7_1:67306650-67306669 None:intergenic 70.0%
! AGGTGGCGGCGGTGGTGAGA+AGG - chr7_1:67306651-67306670 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 67306529 67310939 67306529 ID=Msa1032410;Name=Msa1032410
chr7_1 mRNA 67306529 67310939 67306529 ID=Msa1032410-mRNA-1;Parent=Msa1032410;Name=Msa1032410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=75|0.75|0.8|1|0.75|0.6|5|422|357
chr7_1 exon 67306529 67306852 67306529 ID=Msa1032410-mRNA-1:exon:15429;Parent=Msa1032410-mRNA-1
chr7_1 exon 67308901 67309419 67308901 ID=Msa1032410-mRNA-1:exon:15430;Parent=Msa1032410-mRNA-1
chr7_1 exon 67309830 67309895 67309830 ID=Msa1032410-mRNA-1:exon:15431;Parent=Msa1032410-mRNA-1
chr7_1 exon 67310258 67310816 67310258 ID=Msa1032410-mRNA-1:exon:15432;Parent=Msa1032410-mRNA-1
chr7_1 exon 67310837 67310939 67310837 ID=Msa1032410-mRNA-1:exon:15433;Parent=Msa1032410-mRNA-1
chr7_1 five_prime_UTR 67306529 67306603 67306529 ID=Msa1032410-mRNA-1:five_prime_utr;Parent=Msa1032410-mRNA-1
chr7_1 CDS 67306604 67306852 67306604 ID=Msa1032410-mRNA-1:cds;Parent=Msa1032410-mRNA-1
chr7_1 CDS 67308901 67309419 67308901 ID=Msa1032410-mRNA-1:cds;Parent=Msa1032410-mRNA-1
chr7_1 CDS 67309830 67309895 67309830 ID=Msa1032410-mRNA-1:cds;Parent=Msa1032410-mRNA-1
chr7_1 CDS 67310258 67310497 67310258 ID=Msa1032410-mRNA-1:cds;Parent=Msa1032410-mRNA-1
chr7_1 three_prime_UTR 67310498 67310816 67310498 ID=Msa1032410-mRNA-1:three_prime_utr;Parent=Msa1032410-mRNA-1
chr7_1 three_prime_UTR 67310837 67310939 67310837 ID=Msa1032410-mRNA-1:three_prime_utr;Parent=Msa1032410-mRNA-1
Gene Sequence

>Msa1032410

ATGGCCACCGTCCTCCGAACTCCCACATTCCGGCCATCCCCAACCCTTCTCACCACCGCCGCCACCTCTTCCAATCACTCCAGAACCTCACGCGTTTCCGTCGCATCCTCCAGAAGAAGACCTTCACCACTTAAATCCCACCGGTTCGGTTCAATTCCCACTCCCCGGTTCGTCAAGTTAGTACCTTTTGCTTTTGACGGAGATACCGAGGCACCGCAAGTTCAAGATTCACCCGAGGTTCAGGTTCTGGACTCTACAGATGGTGCTGCTGATGTGGAGGAGAGTACAGGTGATGATGAGGTCAGCGACGCTGGTGAAGTACCTGCTTCACCTCTGATAGTATTACTTCAGTCATACAAAGAAGCACTAGCTAATAATGATGCAGTCAAAGTTGCTGAGTTGGAATCATCATTAAAATCCATTGATGATGAGATAGTAGGTCTTGAAGGGAAAATAGCCTCCTTATCCGAAGAGTTATCAATAGAAAAAGATCGAAAACTAAGGATCGGTGCAGACTTTGACAATTATCGGAAGAGAACCGACAGAGATCGCCTATCACTGGTCACAAATGCTCAAGGGGAAGTTGTGGAGAGTTTGTTGCCTGTATTGGATAATTTTGAGAGAGCTAAAGCTCAGATCAAGGTGGAGACAGAGGGGGAGGAGAAAATAAACAACAGCTATCAAAGCATATATAAGCAGTTCATTGAAATTCTAAACTCACTTGGAGTTGAGCCAGTGGATACGGTTGGAAATCCCTTTGATCCAATGGGGCGCAAACCAGTTGGCTCGAAATTCAATCGTGTACTTGCTGAACTTTTTCAAACACTATATCAACTACATGAAGCAATTATGCGTGAGGATTCTGATGAATTTGAAGATGGCATCATACTTCAAGAATTCAGAAAGGGTTTTAAACTTGGTGACCGCCTCTTACGTCCATCAATGGTGAAGGTATCAGCTGGTCCAGGACCTGCAAAGCCGGAACAAGAAGCACCACAGGAAGAGCAAGTCACCAATGAAACTTCCCAGGACAGTAAAGAGAATGATGGCAACACAGAAACAGAGTCCGCTTGA

Protein sequence

>Msa1032410

MATVLRTPTFRPSPTLLTTAATSSNHSRTSRVSVASSRRRPSPLKSHRFGSIPTPRFVKLVPFAFDGDTEAPQVQDSPEVQVLDSTDGAADVEESTGDDEVSDAGEVPASPLIVLLQSYKEALANNDAVKVAELESSLKSIDDEIVGLEGKIASLSEELSIEKDRKLRIGADFDNYRKRTDRDRLSLVTNAQGEVVESLLPVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFIEILNSLGVEPVDTVGNPFDPMGRKPVGSKFNRVLAELFQTLYQLHEAIMREDSDEFEDGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQEAPQEEQVTNETSQDSKENDGNTETESA*