Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210400 | KEH31868.1 | 95.833 | 48 | 2 | 0 | 1 | 48 | 1 | 48 | 9.62e-24 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210400 | A0A072US49 | 95.833 | 48 | 2 | 0 | 1 | 48 | 1 | 48 | 4.59e-24 | 94.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008410 | Msa1210400 | 0.837288 | 5.679937e-57 | -8.615850e-47 |
| Msa0015300 | Msa1210400 | 0.806348 | 8.592945e-50 | -8.615850e-47 |
| Msa0047980 | Msa1210400 | 0.821473 | 3.963285e-53 | -8.615850e-47 |
| Msa0064350 | Msa1210400 | 0.834998 | 2.166953e-56 | -8.615850e-47 |
| Msa0073670 | Msa1210400 | 0.803451 | 3.463952e-49 | -8.615850e-47 |
| Msa0076000 | Msa1210400 | 0.804361 | 2.241708e-49 | -8.615850e-47 |
| Msa0089360 | Msa1210400 | 0.807963 | 3.909433e-50 | -8.615850e-47 |
| Msa0094920 | Msa1210400 | 0.812780 | 3.567985e-51 | -8.615850e-47 |
| Msa0623700 | Msa1210400 | 0.808510 | 2.989880e-50 | -8.615850e-47 |
| Msa0625280 | Msa1210400 | 0.813564 | 2.400887e-51 | -8.615850e-47 |
| Msa0663900 | Msa1210400 | 0.835555 | 1.567890e-56 | -8.615850e-47 |
| Msa0680240 | Msa1210400 | 0.818863 | 1.569522e-52 | -8.615850e-47 |
| Msa0682780 | Msa1210400 | 0.801147 | 1.032688e-48 | -8.615850e-47 |
| Msa0687630 | Msa1210400 | 0.840327 | 9.295264e-58 | -8.615850e-47 |
| Msa0692840 | Msa1210400 | 0.818747 | 1.668086e-52 | -8.615850e-47 |
| Msa0692940 | Msa1210400 | 0.809973 | 1.452309e-50 | -8.615850e-47 |
| Msa0703230 | Msa1210400 | 0.813883 | 2.043276e-51 | -8.615850e-47 |
| Msa0706370 | Msa1210400 | 0.812804 | 3.525305e-51 | -8.615850e-47 |
| Msa0713820 | Msa1210400 | 0.801147 | 1.032811e-48 | -8.615850e-47 |
| Msa0724830 | Msa1210400 | 0.818062 | 2.383872e-52 | -8.615850e-47 |
| Msa0797750 | Msa1210400 | 0.821136 | 4.739118e-53 | -8.615850e-47 |
| Msa0814320 | Msa1210400 | 0.813102 | 3.033699e-51 | -8.615850e-47 |
| Msa0824640 | Msa1210400 | 0.815064 | 1.119419e-51 | -8.615850e-47 |
| Msa0174770 | Msa1210400 | 0.800502 | 1.398652e-48 | -8.615850e-47 |
| Msa0184020 | Msa1210400 | 0.823833 | 1.119555e-53 | -8.615850e-47 |
| Msa0185590 | Msa1210400 | 0.820326 | 7.276988e-53 | -8.615850e-47 |
| Msa0186890 | Msa1210400 | 0.814978 | 1.170014e-51 | -8.615850e-47 |
| Msa0199690 | Msa1210400 | 0.806704 | 7.228005e-50 | -8.615850e-47 |
| Msa0372660 | Msa1210400 | 0.828384 | 9.261358e-55 | -8.615850e-47 |
| Msa0372670 | Msa1210400 | 0.821050 | 4.962208e-53 | -8.615850e-47 |
| Msa0394400 | Msa1210400 | 0.816382 | 5.691740e-52 | -8.615850e-47 |
| Msa0402330 | Msa1210400 | 0.801972 | 6.994901e-49 | -8.615850e-47 |
| Msa0413450 | Msa1210400 | 0.810927 | 9.035075e-51 | -8.615850e-47 |
| Msa0415810 | Msa1210400 | 0.819324 | 1.233163e-52 | -8.615850e-47 |
| Msa0416400 | Msa1210400 | 0.815926 | 7.196268e-52 | -8.615850e-47 |
| Msa0426330 | Msa1210400 | 0.833019 | 6.780243e-56 | -8.615850e-47 |
| Msa0428170 | Msa1210400 | 0.809851 | 1.542506e-50 | -8.615850e-47 |
| Msa0449820 | Msa1210400 | 0.807275 | 5.474150e-50 | -8.615850e-47 |
| Msa0474950 | Msa1210400 | 0.819712 | 1.005721e-52 | -8.615850e-47 |
| Msa0481480 | Msa1210400 | 0.814381 | 1.585603e-51 | -8.615850e-47 |
| Msa0980940 | Msa1210400 | 0.802095 | 6.599699e-49 | -8.615850e-47 |
| Msa0986920 | Msa1210400 | 0.821835 | 3.268234e-53 | -8.615850e-47 |
| Msa1004420 | Msa1210400 | 0.801376 | 9.271890e-49 | -8.615850e-47 |
| Msa1040890 | Msa1210400 | 0.802555 | 5.307795e-49 | -8.615850e-47 |
| Msa1100720 | Msa1210400 | 0.822345 | 2.489612e-53 | -8.615850e-47 |
| Msa0241780 | Msa1210400 | 0.802327 | 5.913641e-49 | -8.615850e-47 |
| Msa0260210 | Msa1210400 | 0.810929 | 9.028974e-51 | -8.615850e-47 |
| Msa0271810 | Msa1210400 | 0.804535 | 2.062291e-49 | -8.615850e-47 |
| Msa0291520 | Msa1210400 | 0.804962 | 1.679154e-49 | -8.615850e-47 |
| Msa0300120 | Msa1210400 | 0.813314 | 2.725152e-51 | -8.615850e-47 |
| Msa0304290 | Msa1210400 | 0.809260 | 2.066411e-50 | -8.615850e-47 |
| Msa0304330 | Msa1210400 | 0.808365 | 3.210036e-50 | -8.615850e-47 |
| Msa0311700 | Msa1210400 | 0.815096 | 1.101498e-51 | -8.615850e-47 |
| Msa0321190 | Msa1210400 | 0.811948 | 5.424066e-51 | -8.615850e-47 |
| Msa0355270 | Msa1210400 | 0.801443 | 8.984650e-49 | -8.615850e-47 |
| Msa1126510 | Msa1210400 | 0.816822 | 4.535745e-52 | -8.615850e-47 |
| Msa1126770 | Msa1210400 | 0.826463 | 2.675560e-54 | -8.615850e-47 |
| Msa1127890 | Msa1210400 | 0.824911 | 6.243478e-54 | -8.615850e-47 |
| Msa1134110 | Msa1210400 | 0.823179 | 1.592216e-53 | -8.615850e-47 |
| Msa1165870 | Msa1210400 | 0.804085 | 2.558151e-49 | -8.615850e-47 |
| Msa1172670 | Msa1210400 | 0.802817 | 4.685491e-49 | -8.615850e-47 |
| Msa1184370 | Msa1210400 | 0.827237 | 1.748141e-54 | -8.615850e-47 |
| Msa1210400 | Msa1210810 | 0.808130 | 3.603273e-50 | -8.615850e-47 |
| Msa1210400 | Msa1227690 | 0.824804 | 6.617348e-54 | -8.615850e-47 |
| Msa1210400 | Msa1228890 | 0.806709 | 7.210924e-50 | -8.615850e-47 |
| Msa1210400 | Msa1254710 | 0.834563 | 2.788185e-56 | -8.615850e-47 |
| Msa1210400 | Msa1255040 | -0.809699 | 1.663332e-50 | -8.615850e-47 |
| Msa1210400 | Msa1267840 | 0.814888 | 1.224578e-51 | -8.615850e-47 |
| Msa1210400 | Msa1280560 | 0.824364 | 8.403409e-54 | -8.615850e-47 |
| Msa1210400 | Msa1283170 | 0.806301 | 8.792765e-50 | -8.615850e-47 |
| Msa1210400 | Msa1294840 | 0.805908 | 1.063698e-49 | -8.615850e-47 |
| Msa1210400 | Msa1295490 | -0.811380 | 7.205825e-51 | -8.615850e-47 |
| Msa1210400 | Msa1299360 | 0.810481 | 1.128322e-50 | -8.615850e-47 |
| Msa1210400 | Msa1307950 | 0.862668 | 4.306822e-64 | -8.615850e-47 |
| Msa1210400 | Msa1310690 | 0.805500 | 1.295788e-49 | -8.615850e-47 |
| Msa1210400 | Msa1321630 | 0.835286 | 1.832902e-56 | -8.615850e-47 |
| Msa1210400 | Msa1335940 | 0.802647 | 5.080691e-49 | -8.615850e-47 |
| Msa1210400 | Msa1340020 | 0.832749 | 7.912970e-56 | -8.615850e-47 |
| Msa1210400 | Msa1344850 | 0.866740 | 2.285598e-65 | -8.615850e-47 |
| Msa1210400 | Msa1365150 | 0.822088 | 2.856594e-53 | -8.615850e-47 |
| Msa1210400 | Msa1367880 | 0.829553 | 4.826065e-55 | -8.615850e-47 |
| Msa1210400 | Msa1397810 | 0.802584 | 5.234127e-49 | -8.615850e-47 |
| Msa1210400 | Msa1404190 | 0.845028 | 5.242707e-59 | -8.615850e-47 |
| Msa1210400 | Msa1438640 | 0.812588 | 3.930348e-51 | -8.615850e-47 |
| Msa1210400 | Msa1442850 | 0.820063 | 8.360639e-53 | -8.615850e-47 |
| Msa1210400 | Msa1465080 | 0.857163 | 1.967955e-62 | -8.615850e-47 |
| Msa1210400 | Msa1466460 | 0.805687 | 1.183722e-49 | -8.615850e-47 |
| Msa0506890 | Msa1210400 | 0.802579 | 5.245950e-49 | -8.615850e-47 |
| Msa0526890 | Msa1210400 | 0.805890 | 1.072941e-49 | -8.615850e-47 |
| Msa0541860 | Msa1210400 | 0.815212 | 1.037589e-51 | -8.615850e-47 |
| Msa0552810 | Msa1210400 | 0.870450 | 1.445632e-66 | -8.615850e-47 |
| Msa0560470 | Msa1210400 | 0.809095 | 2.241794e-50 | -8.615850e-47 |
| Msa0581070 | Msa1210400 | 0.829093 | 6.241361e-55 | -8.615850e-47 |
| Msa0842830 | Msa1210400 | 0.804098 | 2.542855e-49 | -8.615850e-47 |
| Msa0864010 | Msa1210400 | 0.817614 | 3.010205e-52 | -8.615850e-47 |
| Msa0960160 | Msa1210400 | 0.807253 | 5.531737e-50 | -8.615850e-47 |
| Msa0967370 | Msa1210400 | 0.824303 | 8.685628e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210400 | MtrunA17_Chr4g0059621 | 95.833 | 48 | 2 | 0 | 1 | 48 | 1 | 48 | 8.84e-28 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTGTTGTGAATCGAAAA+TGG | 0.327426 | 8_1:+69310566 | Msa1210400:exon |
| ATGGGAATAGCTGGTAAGAT+TGG | 0.362277 | 8_1:+69310585 | Msa1210400:CDS |
| TGGGAATAGCTGGTAAGATT+GGG | 0.374359 | 8_1:+69310586 | Msa1210400:CDS |
| GATTGGGGATTACACTTTCA+AGG | 0.398797 | 8_1:+69310602 | Msa1210400:CDS |
| AAGGCCTTTGTAAACATTAA+CGG | 0.435862 | 8_1:-69310676 | None:intergenic |
| TCCAATTAGGGGCTAGAGAA+AGG | 0.438832 | 8_1:+69311244 | Msa1210400:intron |
| TTGTGTTGTGAATCGAAAAT+GGG | 0.473456 | 8_1:+69310567 | Msa1210400:exon |
| GAATCGAAAATGGGAATAGC+TGG | 0.500649 | 8_1:+69310576 | Msa1210400:exon |
| CGACAGAGTATAACTTCGTA+AGG | 0.505152 | 8_1:+69310515 | None:intergenic |
| ATGTTTACAAAGGCCTTGCT+TGG | 0.507155 | 8_1:+69310682 | Msa1210400:CDS |
| TTCGATTCACAACACAAACT+AGG | 0.520675 | 8_1:-69310561 | None:intergenic |
| AAGGCTTTCACAGCAACTCT+CGG | 0.525587 | 8_1:+69310621 | Msa1210400:CDS |
| GGGAATAGCTGGTAAGATTG+GGG | 0.543838 | 8_1:+69310587 | Msa1210400:CDS |
| AACATTAACGGAGAAAGTGC+CGG | 0.561590 | 8_1:-69310664 | None:intergenic |
| TTCTCCGTTAATGTTTACAA+AGG | 0.561828 | 8_1:+69310672 | Msa1210400:CDS |
| TTCGTAAGGGTGTGTGAGCG+TGG | 0.563753 | 8_1:+69310529 | Msa1210400:five_prime_UTR |
| ATTGAGCTTTGTGCCAAGCA+AGG | 0.577529 | 8_1:-69310695 | None:intergenic |
| ATCACTACTATCTACCTCAC+CGG | 0.580585 | 8_1:+69310645 | Msa1210400:CDS |
| TAACGGAGAAAGTGCCGGTG+AGG | 0.652823 | 8_1:-69310659 | None:intergenic |
| GACAGAGTATAACTTCGTAA+GGG | 0.688135 | 8_1:+69310516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTACTAAATATGAATTAAA+TGG | - | chr8_1:69310852-69310871 | None:intergenic | 15.0% |
| !! | AGTACTAAATATGAATTAAA+TGG | - | chr8_1:69310852-69310871 | None:intergenic | 15.0% |
| !! | GTATAAAATATGAATGATCA+AGG | - | chr8_1:69310963-69310982 | None:intergenic | 20.0% |
| !!! | AATTTGTTGTTTATCCAATT+AGG | + | chr8_1:69311231-69311250 | Msa1210400:intron | 20.0% |
| !!! | ATTTGTTGTTTATCCAATTA+GGG | + | chr8_1:69311232-69311251 | Msa1210400:intron | 20.0% |
| !! | GTATAAAATATGAATGATCA+AGG | - | chr8_1:69310963-69310982 | None:intergenic | 20.0% |
| !!! | AATTTGTTGTTTATCCAATT+AGG | + | chr8_1:69311231-69311250 | Msa1210400:intron | 20.0% |
| !!! | ATTTGTTGTTTATCCAATTA+GGG | + | chr8_1:69311232-69311251 | Msa1210400:intron | 20.0% |
| ! | GAAGATTGAAACAAAGTAAT+TGG | - | chr8_1:69310823-69310842 | None:intergenic | 25.0% |
| !! | ATGTCATAAACTGATTTCAT+AGG | - | chr8_1:69311039-69311058 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTATCCAATTAG+GGG | + | chr8_1:69311233-69311252 | Msa1210400:intron | 25.0% |
| ! | GAAGATTGAAACAAAGTAAT+TGG | - | chr8_1:69310823-69310842 | None:intergenic | 25.0% |
| !! | ATGTCATAAACTGATTTCAT+AGG | - | chr8_1:69311039-69311058 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTATCCAATTAG+GGG | + | chr8_1:69311233-69311252 | Msa1210400:intron | 25.0% |
| TTTGTGTTGTGAATCGAAAA+TGG | + | chr8_1:69310566-69310585 | Msa1210400:exon | 30.0% | |
| TTGTGTTGTGAATCGAAAAT+GGG | + | chr8_1:69310567-69310586 | Msa1210400:exon | 30.0% | |
| TTCTCCGTTAATGTTTACAA+AGG | + | chr8_1:69310672-69310691 | Msa1210400:CDS | 30.0% | |
| AAGGCCTTTGTAAACATTAA+CGG | - | chr8_1:69310679-69310698 | None:intergenic | 30.0% | |
| ! | TGTAGAATTGTTACTTGATC+TGG | + | chr8_1:69310919-69310938 | Msa1210400:intron | 30.0% |
| ! | TCTCTTTTCATAAGCTATCT+TGG | - | chr8_1:69311099-69311118 | None:intergenic | 30.0% |
| TTTGTGTTGTGAATCGAAAA+TGG | + | chr8_1:69310566-69310585 | Msa1210400:exon | 30.0% | |
| TTGTGTTGTGAATCGAAAAT+GGG | + | chr8_1:69310567-69310586 | Msa1210400:exon | 30.0% | |
| TTCTCCGTTAATGTTTACAA+AGG | + | chr8_1:69310672-69310691 | Msa1210400:CDS | 30.0% | |
| AAGGCCTTTGTAAACATTAA+CGG | - | chr8_1:69310679-69310698 | None:intergenic | 30.0% | |
| ! | TGTAGAATTGTTACTTGATC+TGG | + | chr8_1:69310919-69310938 | Msa1210400:intron | 30.0% |
| ! | TCTCTTTTCATAAGCTATCT+TGG | - | chr8_1:69311099-69311118 | None:intergenic | 30.0% |
| TTCGATTCACAACACAAACT+AGG | - | chr8_1:69310564-69310583 | None:intergenic | 35.0% | |
| AGCTTATTTGTGAGACTGTT+TGG | + | chr8_1:69311008-69311027 | Msa1210400:intron | 35.0% | |
| GCTTATTTGTGAGACTGTTT+GGG | + | chr8_1:69311009-69311028 | Msa1210400:intron | 35.0% | |
| CTTATTTGTGAGACTGTTTG+GGG | + | chr8_1:69311010-69311029 | Msa1210400:intron | 35.0% | |
| TTCGATTCACAACACAAACT+AGG | - | chr8_1:69310564-69310583 | None:intergenic | 35.0% | |
| AGCTTATTTGTGAGACTGTT+TGG | + | chr8_1:69311008-69311027 | Msa1210400:intron | 35.0% | |
| GCTTATTTGTGAGACTGTTT+GGG | + | chr8_1:69311009-69311028 | Msa1210400:intron | 35.0% | |
| CTTATTTGTGAGACTGTTTG+GGG | + | chr8_1:69311010-69311029 | Msa1210400:intron | 35.0% | |
| GAATCGAAAATGGGAATAGC+TGG | + | chr8_1:69310576-69310595 | Msa1210400:exon | 40.0% | |
| ATGGGAATAGCTGGTAAGAT+TGG | + | chr8_1:69310585-69310604 | Msa1210400:CDS | 40.0% | |
| TGGGAATAGCTGGTAAGATT+GGG | + | chr8_1:69310586-69310605 | Msa1210400:CDS | 40.0% | |
| GATTGGGGATTACACTTTCA+AGG | + | chr8_1:69310602-69310621 | Msa1210400:CDS | 40.0% | |
| ATCACTACTATCTACCTCAC+CGG | + | chr8_1:69310645-69310664 | Msa1210400:CDS | 40.0% | |
| ! | AACATTAACGGAGAAAGTGC+CGG | - | chr8_1:69310667-69310686 | None:intergenic | 40.0% |
| ATGTTTACAAAGGCCTTGCT+TGG | + | chr8_1:69310682-69310701 | Msa1210400:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+CGG | - | chr8_1:69311088-69311107 | None:intergenic | 40.0% | |
| GAATCGAAAATGGGAATAGC+TGG | + | chr8_1:69310576-69310595 | Msa1210400:exon | 40.0% | |
| ATGGGAATAGCTGGTAAGAT+TGG | + | chr8_1:69310585-69310604 | Msa1210400:CDS | 40.0% | |
| TGGGAATAGCTGGTAAGATT+GGG | + | chr8_1:69310586-69310605 | Msa1210400:CDS | 40.0% | |
| GATTGGGGATTACACTTTCA+AGG | + | chr8_1:69310602-69310621 | Msa1210400:CDS | 40.0% | |
| ATCACTACTATCTACCTCAC+CGG | + | chr8_1:69310645-69310664 | Msa1210400:CDS | 40.0% | |
| ! | AACATTAACGGAGAAAGTGC+CGG | - | chr8_1:69310667-69310686 | None:intergenic | 40.0% |
| ATGTTTACAAAGGCCTTGCT+TGG | + | chr8_1:69310682-69310701 | Msa1210400:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+CGG | - | chr8_1:69311088-69311107 | None:intergenic | 40.0% | |
| GGGAATAGCTGGTAAGATTG+GGG | + | chr8_1:69310587-69310606 | Msa1210400:CDS | 45.0% | |
| AAGGCTTTCACAGCAACTCT+CGG | + | chr8_1:69310621-69310640 | Msa1210400:CDS | 45.0% | |
| ! | ATTGAGCTTTGTGCCAAGCA+AGG | - | chr8_1:69310698-69310717 | None:intergenic | 45.0% |
| GAGAGAGAGAAAGAGGGTTA+CGG | - | chr8_1:69310721-69310740 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAAAGA+GGG | - | chr8_1:69310727-69310746 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAAAG+AGG | - | chr8_1:69310728-69310747 | None:intergenic | 45.0% | |
| TCCAATTAGGGGCTAGAGAA+AGG | + | chr8_1:69311244-69311263 | Msa1210400:intron | 45.0% | |
| GGGAATAGCTGGTAAGATTG+GGG | + | chr8_1:69310587-69310606 | Msa1210400:CDS | 45.0% | |
| AAGGCTTTCACAGCAACTCT+CGG | + | chr8_1:69310621-69310640 | Msa1210400:CDS | 45.0% | |
| ! | ATTGAGCTTTGTGCCAAGCA+AGG | - | chr8_1:69310698-69310717 | None:intergenic | 45.0% |
| GAGAGAGAGAAAGAGGGTTA+CGG | - | chr8_1:69310721-69310740 | None:intergenic | 45.0% | |
| GAGAGAGAGAGAGAGAAAGA+GGG | - | chr8_1:69310727-69310746 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAAAG+AGG | - | chr8_1:69310728-69310747 | None:intergenic | 45.0% | |
| TCCAATTAGGGGCTAGAGAA+AGG | + | chr8_1:69311244-69311263 | Msa1210400:intron | 45.0% | |
| GCCTTTCTCTAGCCCCTAAT+TGG | - | chr8_1:69311248-69311267 | None:intergenic | 50.0% | |
| GCCTTTCTCTAGCCCCTAAT+TGG | - | chr8_1:69311248-69311267 | None:intergenic | 50.0% | |
| ! | TTCGTAAGGGTGTGTGAGCG+TGG | + | chr8_1:69310529-69310548 | Msa1210400:five_prime_UTR | 55.0% |
| !! | TAACGGAGAAAGTGCCGGTG+AGG | - | chr8_1:69310662-69310681 | None:intergenic | 55.0% |
| ! | TTCGTAAGGGTGTGTGAGCG+TGG | + | chr8_1:69310529-69310548 | Msa1210400:five_prime_UTR | 55.0% |
| !! | TAACGGAGAAAGTGCCGGTG+AGG | - | chr8_1:69310662-69310681 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 69310529 | 69311288 | 69310529 | ID=Msa1210400;Name=Msa1210400 |
| chr8_1 | mRNA | 69310529 | 69311288 | 69310529 | ID=Msa1210400-mRNA-1;Parent=Msa1210400;Name=Msa1210400-mRNA-1;_AED=0.43;_eAED=0.43;_QI=56|0|0.5|0.5|1|1|2|0|56 |
| chr8_1 | exon | 69310529 | 69310719 | 69310529 | ID=Msa1210400-mRNA-1:exon:23203;Parent=Msa1210400-mRNA-1 |
| chr8_1 | exon | 69311253 | 69311288 | 69311253 | ID=Msa1210400-mRNA-1:exon:23204;Parent=Msa1210400-mRNA-1 |
| chr8_1 | five_prime_UTR | 69310529 | 69310584 | 69310529 | ID=Msa1210400-mRNA-1:five_prime_utr;Parent=Msa1210400-mRNA-1 |
| chr8_1 | CDS | 69310585 | 69310719 | 69310585 | ID=Msa1210400-mRNA-1:cds;Parent=Msa1210400-mRNA-1 |
| chr8_1 | CDS | 69311253 | 69311288 | 69311253 | ID=Msa1210400-mRNA-1:cds;Parent=Msa1210400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
