Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625280 | XP_013454497.1 | 98.529 | 136 | 2 | 0 | 8 | 143 | 1 | 136 | 1.81e-92 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008410 | Msa0625280 | 0.822785 | 1.967013e-53 | -8.615850e-47 |
| Msa0013050 | Msa0625280 | -0.810005 | 1.429239e-50 | -8.615850e-47 |
| Msa0025730 | Msa0625280 | 0.801141 | 1.035506e-48 | -8.615850e-47 |
| Msa0030310 | Msa0625280 | 0.806738 | 7.110024e-50 | -8.615850e-47 |
| Msa0032260 | Msa0625280 | 0.826414 | 2.748446e-54 | -8.615850e-47 |
| Msa0044710 | Msa0625280 | 0.811351 | 7.311017e-51 | -8.615850e-47 |
| Msa0057140 | Msa0625280 | 0.831118 | 2.001279e-55 | -8.615850e-47 |
| Msa0081230 | Msa0625280 | 0.808780 | 2.617065e-50 | -8.615850e-47 |
| Msa0084940 | Msa0625280 | 0.816249 | 6.094332e-52 | -8.615850e-47 |
| Msa0094920 | Msa0625280 | 0.806905 | 6.553418e-50 | -8.615850e-47 |
| Msa0095010 | Msa0625280 | 0.954987 | 8.531782e-113 | -8.615850e-47 |
| Msa0095380 | Msa0625280 | 0.808312 | 3.294231e-50 | -8.615850e-47 |
| Msa0104290 | Msa0625280 | 0.800435 | 1.443462e-48 | -8.615850e-47 |
| Msa0618010 | Msa0625280 | 0.810425 | 1.160194e-50 | -8.615850e-47 |
| Msa0619070 | Msa0625280 | 0.857348 | 1.735782e-62 | -8.615850e-47 |
| Msa0623700 | Msa0625280 | 0.808229 | 3.431173e-50 | -8.615850e-47 |
| Msa0625280 | Msa0639120 | 0.800406 | 1.463180e-48 | -8.615850e-47 |
| Msa0625280 | Msa0647380 | 0.800935 | 1.141390e-48 | -8.615850e-47 |
| Msa0625280 | Msa0650920 | 0.800620 | 1.323490e-48 | -8.615850e-47 |
| Msa0625280 | Msa0663900 | 0.834781 | 2.458018e-56 | -8.615850e-47 |
| Msa0625280 | Msa0669850 | 0.833785 | 4.369188e-56 | -8.615850e-47 |
| Msa0625280 | Msa0670270 | 0.980018 | 2.921258e-149 | -8.615850e-47 |
| Msa0625280 | Msa0687630 | 0.818551 | 1.847441e-52 | -8.615850e-47 |
| Msa0625280 | Msa0692840 | 0.822555 | 2.225549e-53 | -8.615850e-47 |
| Msa0625280 | Msa0692940 | 0.819768 | 9.763430e-53 | -8.615850e-47 |
| Msa0625280 | Msa0709500 | 0.817373 | 3.410977e-52 | -8.615850e-47 |
| Msa0625280 | Msa0711490 | 0.801148 | 1.032445e-48 | -8.615850e-47 |
| Msa0625280 | Msa0713820 | 0.813223 | 2.854267e-51 | -8.615850e-47 |
| Msa0625280 | Msa0718740 | 0.824463 | 7.962032e-54 | -8.615850e-47 |
| Msa0625280 | Msa0726830 | 0.811832 | 5.748879e-51 | -8.615850e-47 |
| Msa0625280 | Msa0790390 | -0.807096 | 5.973464e-50 | -8.615850e-47 |
| Msa0625280 | Msa0790850 | 0.822940 | 1.810396e-53 | -8.615850e-47 |
| Msa0625280 | Msa0797120 | 0.806902 | 6.565648e-50 | -8.615850e-47 |
| Msa0625280 | Msa0814320 | 0.802409 | 5.687624e-49 | -8.615850e-47 |
| Msa0625280 | Msa0830990 | 0.802195 | 6.295203e-49 | -8.615850e-47 |
| Msa0625280 | Msa0831870 | 0.833147 | 6.302539e-56 | -8.615850e-47 |
| Msa0625280 | Msa0833310 | 0.839457 | 1.566321e-57 | -8.615850e-47 |
| Msa0625280 | Msa0842830 | 0.847439 | 1.155963e-59 | -8.615850e-47 |
| Msa0625280 | Msa0899230 | 0.807137 | 5.853073e-50 | -8.615850e-47 |
| Msa0625280 | Msa0908170 | 0.800949 | 1.133498e-48 | -8.615850e-47 |
| Msa0625280 | Msa0937240 | 0.801885 | 7.291687e-49 | -8.615850e-47 |
| Msa0625280 | Msa0967370 | 0.805605 | 1.231505e-49 | -8.615850e-47 |
| Msa0625280 | Msa0971020 | 0.828797 | 7.361715e-55 | -8.615850e-47 |
| Msa0625280 | Msa0974530 | 0.816403 | 5.630674e-52 | -8.615850e-47 |
| Msa0625280 | Msa0974810 | 0.831368 | 1.736687e-55 | -8.615850e-47 |
| Msa0625280 | Msa1012370 | 0.805371 | 1.378600e-49 | -8.615850e-47 |
| Msa0625280 | Msa1013040 | 0.810669 | 1.027413e-50 | -8.615850e-47 |
| Msa0625280 | Msa1040890 | 0.824552 | 7.589101e-54 | -8.615850e-47 |
| Msa0625280 | Msa1072460 | -0.802761 | 4.813154e-49 | -8.615850e-47 |
| Msa0625280 | Msa1082700 | 0.811464 | 6.910144e-51 | -8.615850e-47 |
| Msa0625280 | Msa1084470 | 0.819850 | 9.353536e-53 | -8.615850e-47 |
| Msa0625280 | Msa1089840 | 0.804177 | 2.448099e-49 | -8.615850e-47 |
| Msa0625280 | Msa1091530 | 0.827467 | 1.539308e-54 | -8.615850e-47 |
| Msa0625280 | Msa1096230 | 0.801088 | 1.061632e-48 | -8.615850e-47 |
| Msa0625280 | Msa1101580 | 0.802251 | 6.130547e-49 | -8.615850e-47 |
| Msa0625280 | Msa1126770 | 0.816613 | 5.051653e-52 | -8.615850e-47 |
| Msa0625280 | Msa1127830 | 0.806121 | 9.594582e-50 | -8.615850e-47 |
| Msa0625280 | Msa1134110 | 0.813651 | 2.297302e-51 | -8.615850e-47 |
| Msa0625280 | Msa1143840 | 0.807359 | 5.254470e-50 | -8.615850e-47 |
| Msa0625280 | Msa1171360 | 0.816935 | 4.278487e-52 | -8.615850e-47 |
| Msa0625280 | Msa1171870 | 0.817959 | 2.515133e-52 | -8.615850e-47 |
| Msa0625280 | Msa1187520 | 0.803470 | 3.433510e-49 | -8.615850e-47 |
| Msa0625280 | Msa1193950 | -0.802400 | 5.712153e-49 | -8.615850e-47 |
| Msa0625280 | Msa1207270 | 0.803620 | 3.195335e-49 | -8.615850e-47 |
| Msa0625280 | Msa1210400 | 0.813564 | 2.400887e-51 | -8.615850e-47 |
| Msa0625280 | Msa1217830 | 0.808093 | 3.667933e-50 | -8.615850e-47 |
| Msa0625280 | Msa1217860 | 0.806248 | 9.020642e-50 | -8.615850e-47 |
| Msa0625280 | Msa1237030 | 0.809426 | 1.903772e-50 | -8.615850e-47 |
| Msa0625280 | Msa1254510 | 0.808171 | 3.531120e-50 | -8.615850e-47 |
| Msa0625280 | Msa1254710 | 0.800693 | 1.278883e-48 | -8.615850e-47 |
| Msa0625280 | Msa1255040 | -0.805951 | 1.041841e-49 | -8.615850e-47 |
| Msa0625280 | Msa1267260 | 0.821063 | 4.926664e-53 | -8.615850e-47 |
| Msa0625280 | Msa1269300 | 0.808337 | 3.254503e-50 | -8.615850e-47 |
| Msa0625280 | Msa1283170 | 0.804464 | 2.133048e-49 | -8.615850e-47 |
| Msa0625280 | Msa1290190 | 0.809714 | 1.651024e-50 | -8.615850e-47 |
| Msa0625280 | Msa1306430 | 0.821169 | 4.656483e-53 | -8.615850e-47 |
| Msa0625280 | Msa1307950 | 0.804397 | 2.203193e-49 | -8.615850e-47 |
| Msa0625280 | Msa1315870 | 0.800290 | 1.544464e-48 | -8.615850e-47 |
| Msa0625280 | Msa1321630 | 0.820073 | 8.314391e-53 | -8.615850e-47 |
| Msa0625280 | Msa1335940 | 0.832088 | 1.153723e-55 | -8.615850e-47 |
| Msa0625280 | Msa1344850 | 0.814783 | 1.292352e-51 | -8.615850e-47 |
| Msa0625280 | Msa1345450 | 0.809233 | 2.093733e-50 | -8.615850e-47 |
| Msa0625280 | Msa1362880 | 0.811985 | 5.321695e-51 | -8.615850e-47 |
| Msa0625280 | Msa1365150 | 0.808120 | 3.620128e-50 | -8.615850e-47 |
| Msa0625280 | Msa1367880 | 0.811718 | 6.086739e-51 | -8.615850e-47 |
| Msa0625280 | Msa1397810 | 0.805412 | 1.351630e-49 | -8.615850e-47 |
| Msa0625280 | Msa1403580 | -0.814562 | 1.446655e-51 | -8.615850e-47 |
| Msa0625280 | Msa1403930 | -0.807101 | 5.956982e-50 | -8.615850e-47 |
| Msa0625280 | Msa1404010 | 0.809203 | 2.124497e-50 | -8.615850e-47 |
| Msa0625280 | Msa1404190 | 0.823943 | 1.055124e-53 | -8.615850e-47 |
| Msa0625280 | Msa1439960 | 0.810863 | 9.327629e-51 | -8.615850e-47 |
| Msa0625280 | Msa1440000 | 0.810861 | 9.336079e-51 | -8.615850e-47 |
| Msa0625280 | Msa1443290 | -0.802222 | 6.216579e-49 | -8.615850e-47 |
| Msa0625280 | Msa1460470 | 0.800595 | 1.338882e-48 | -8.615850e-47 |
| Msa0625280 | Msa1461280 | 0.801727 | 7.853749e-49 | -8.615850e-47 |
| Msa0625280 | Msa1465960 | 0.814969 | 1.175195e-51 | -8.615850e-47 |
| Msa0127310 | Msa0625280 | 0.808741 | 2.668141e-50 | -8.615850e-47 |
| Msa0143380 | Msa0625280 | 0.800383 | 1.478865e-48 | -8.615850e-47 |
| Msa0162770 | Msa0625280 | -0.823984 | 1.031699e-53 | -8.615850e-47 |
| Msa0199690 | Msa0625280 | 0.823343 | 1.457712e-53 | -8.615850e-47 |
| Msa0211860 | Msa0625280 | 0.809170 | 2.159522e-50 | -8.615850e-47 |
| Msa0236980 | Msa0625280 | 0.814038 | 1.888383e-51 | -8.615850e-47 |
| Msa0369050 | Msa0625280 | 0.802278 | 6.051796e-49 | -8.615850e-47 |
| Msa0376690 | Msa0625280 | 0.821113 | 4.798342e-53 | -8.615850e-47 |
| Msa0402330 | Msa0625280 | 0.822073 | 2.878301e-53 | -8.615850e-47 |
| Msa0414950 | Msa0625280 | -0.803577 | 3.262369e-49 | -8.615850e-47 |
| Msa0420000 | Msa0625280 | 0.810076 | 1.379978e-50 | -8.615850e-47 |
| Msa0426330 | Msa0625280 | 0.802813 | 4.695847e-49 | -8.615850e-47 |
| Msa0429290 | Msa0625280 | 0.811874 | 5.627482e-51 | -8.615850e-47 |
| Msa0471590 | Msa0625280 | 0.823348 | 1.453722e-53 | -8.615850e-47 |
| Msa0475580 | Msa0625280 | 0.822216 | 2.667654e-53 | -8.615850e-47 |
| Msa0260210 | Msa0625280 | 0.804020 | 2.639085e-49 | -8.615850e-47 |
| Msa0270220 | Msa0625280 | -0.804284 | 2.326320e-49 | -8.615850e-47 |
| Msa0291500 | Msa0625280 | 0.803557 | 3.293902e-49 | -8.615850e-47 |
| Msa0291520 | Msa0625280 | 0.814096 | 1.833255e-51 | -8.615850e-47 |
| Msa0296760 | Msa0625280 | 0.811836 | 5.734706e-51 | -8.615850e-47 |
| Msa0304290 | Msa0625280 | 0.812801 | 3.530802e-51 | -8.615850e-47 |
| Msa0304330 | Msa0625280 | 0.812025 | 5.216558e-51 | -8.615850e-47 |
| Msa0326670 | Msa0625280 | 0.801844 | 7.434232e-49 | -8.615850e-47 |
| Msa0327410 | Msa0625280 | 0.817437 | 3.299869e-52 | -8.615850e-47 |
| Msa0329350 | Msa0625280 | 0.807535 | 4.821276e-50 | -8.615850e-47 |
| Msa0337650 | Msa0625280 | 0.807257 | 5.522137e-50 | -8.615850e-47 |
| Msa0355270 | Msa0625280 | 0.822570 | 2.207612e-53 | -8.615850e-47 |
| Msa0508590 | Msa0625280 | 0.815816 | 7.617267e-52 | -8.615850e-47 |
| Msa0508630 | Msa0625280 | 0.828369 | 9.341137e-55 | -8.615850e-47 |
| Msa0509390 | Msa0625280 | 0.808900 | 2.467682e-50 | -8.615850e-47 |
| Msa0519220 | Msa0625280 | 0.800673 | 1.290823e-48 | -8.615850e-47 |
| Msa0526890 | Msa0625280 | 0.810803 | 9.612931e-51 | -8.615850e-47 |
| Msa0535030 | Msa0625280 | 0.820056 | 8.388776e-53 | -8.615850e-47 |
| Msa0535060 | Msa0625280 | 0.820877 | 5.436686e-53 | -8.615850e-47 |
| Msa0552810 | Msa0625280 | 0.808570 | 2.902953e-50 | -8.615850e-47 |
| Msa0568820 | Msa0625280 | 0.853633 | 2.100559e-61 | -8.615850e-47 |
| Msa0581070 | Msa0625280 | 0.822163 | 2.744188e-53 | -8.615850e-47 |
| Msa0590650 | Msa0625280 | 0.803712 | 3.059117e-49 | -8.615850e-47 |
| Msa0590680 | Msa0625280 | 0.805201 | 1.496813e-49 | -8.615850e-47 |
| Msa0591060 | Msa0625280 | 0.815685 | 8.146091e-52 | -8.615850e-47 |
| Msa0591770 | Msa0625280 | 0.821461 | 3.988715e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625280 | MtrunA17_Chr4g0000361 | 98.529 | 136 | 2 | 0 | 8 | 143 | 1 | 136 | 1.67e-96 | 274 |
| Msa0625280 | MtrunA17_Chr3g0138861 | 63.014 | 73 | 27 | 0 | 71 | 143 | 1 | 73 | 6.34e-31 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625280 | AT1G16810.3 | 61.111 | 144 | 48 | 2 | 8 | 143 | 1 | 144 | 7.90e-47 | 149 |
| Msa0625280 | AT1G16810.2 | 61.111 | 144 | 48 | 2 | 8 | 143 | 1 | 144 | 7.90e-47 | 149 |
| Msa0625280 | AT1G16810.1 | 61.111 | 144 | 48 | 2 | 8 | 143 | 1 | 144 | 7.90e-47 | 149 |
Find 39 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTTACTTCTTGATCATT+AGG | 0.263557 | 4_3:-4305373 | None:intergenic |
| CGCTCATGTTTGCGAGATAT+TGG | 0.302036 | 4_3:-4305552 | None:intergenic |
| AATCACCCAGGACCAACTTT+AGG | 0.323685 | 4_3:-4305589 | None:intergenic |
| GTGAGATTTATTAGAAATCT+TGG | 0.347606 | 4_3:-4305506 | None:intergenic |
| TTTGACTTAGATTCTGTTGA+TGG | 0.349817 | 4_3:+4305757 | Msa0625280:three_prime_UTR |
| CGAGATATTGGTTGAAATCC+TGG | 0.357664 | 4_3:-4305540 | None:intergenic |
| AACCCAAAGAATAACTGAAT+TGG | 0.374907 | 4_3:-4305898 | None:intergenic |
| GCAACTTGATGTTCATAGAT+TGG | 0.407231 | 4_3:+4305483 | Msa0625280:CDS |
| GGAAAAGCATTGGATGTTGC+TGG | 0.421175 | 4_3:+4304312 | Msa0625280:CDS |
| GATATTCCTAAAGTTGGTCC+TGG | 0.441241 | 4_3:+4305583 | Msa0625280:CDS |
| AGAGCTATTGTGCAAGCATA+TGG | 0.470832 | 4_3:-4305679 | None:intergenic |
| ATGATGGGAGTGAATTGAGC+AGG | 0.471811 | 4_3:+4305392 | Msa0625280:CDS |
| CATTATGATATTCCTAAAGT+TGG | 0.473152 | 4_3:+4305577 | Msa0625280:CDS |
| AACAAACAAATACAAATGAC+AGG | 0.476276 | 4_3:-4305645 | None:intergenic |
| AGTTGGTCCTGGGTGATTCA+AGG | 0.478909 | 4_3:+4305594 | Msa0625280:exon |
| AATGATCAAGAAGTAAATGA+TGG | 0.482714 | 4_3:+4305376 | Msa0625280:CDS |
| TCTATGTACCGCCTCTCTGC+TGG | 0.489804 | 4_3:-4305451 | None:intergenic |
| TTGACTTAGATTCTGTTGAT+GGG | 0.507882 | 4_3:+4305758 | Msa0625280:three_prime_UTR |
| ATCTCACCGCGATAGAATCC+AGG | 0.518832 | 4_3:+4305522 | Msa0625280:CDS |
| GAAGCTGAAGGGAAAAGCAT+TGG | 0.531649 | 4_3:+4304302 | Msa0625280:CDS |
| ACTGAAGATGAAATCTCAGC+AGG | 0.540124 | 4_3:+4304393 | Msa0625280:CDS |
| AGATGATCATCATAATGAGC+AGG | 0.545898 | 4_3:-4305424 | None:intergenic |
| TCGGCATATGAGAATGTTGT+TGG | 0.556165 | 4_3:+4304270 | Msa0625280:CDS |
| TGATGGGAGTGAATTGAGCA+GGG | 0.558875 | 4_3:+4305393 | Msa0625280:CDS |
| ATGATCAAGAAGTAAATGAT+GGG | 0.571574 | 4_3:+4305377 | Msa0625280:CDS |
| GAGTTGTTCAAGTATGAAGA+AGG | 0.582106 | 4_3:+4305616 | Msa0625280:three_prime_UTR |
| ATATTCCTAAAGTTGGTCCT+GGG | 0.598854 | 4_3:+4305584 | Msa0625280:CDS |
| TCATTGTTGCACAGATATGT+CGG | 0.603982 | 4_3:+4304251 | Msa0625280:CDS |
| TGACTTAGATTCTGTTGATG+GGG | 0.615060 | 4_3:+4305759 | Msa0625280:three_prime_UTR |
| AACAACTCCTTGAATCACCC+AGG | 0.629413 | 4_3:-4305601 | None:intergenic |
| ATCTTACACCAGCAGAGAGG+CGG | 0.643614 | 4_3:+4305443 | Msa0625280:CDS |
| GCATATGAGAATGTTGTTGG+TGG | 0.647733 | 4_3:+4304273 | Msa0625280:CDS |
| ACAAACAAATACAAATGACA+GGG | 0.651390 | 4_3:-4305644 | None:intergenic |
| TGAAATCCTGGATTCTATCG+CGG | 0.661087 | 4_3:-4305528 | None:intergenic |
| TGGTGGTAAACTGAAGCTGA+AGG | 0.678860 | 4_3:+4304290 | Msa0625280:CDS |
| AAAGCATTGGATGTTGCTGG+CGG | 0.694873 | 4_3:+4304315 | Msa0625280:CDS |
| GGTGGTAAACTGAAGCTGAA+GGG | 0.696896 | 4_3:+4304291 | Msa0625280:CDS |
| ATCATCTTACACCAGCAGAG+AGG | 0.709383 | 4_3:+4305440 | Msa0625280:CDS |
| CAAACAAATACAAATGACAG+GGG | 0.732012 | 4_3:-4305643 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAAATTTCATAGA+AGG | - | chr4_3:4305802-4305821 | None:intergenic | 10.0% |
| !! | AAATATAAAAATTTCATAGA+AGG | - | chr4_3:4305802-4305821 | None:intergenic | 10.0% |
| !!! | CATAGTATTATGTTTTAAAA+TGG | + | chr4_3:4304512-4304531 | Msa0625280:intron | 15.0% |
| !! | AAAAAAATTATGTTCAAGTA+AGG | - | chr4_3:4304764-4304783 | None:intergenic | 15.0% |
| !!! | TTTTTTTACTGAAAATCATA+AGG | + | chr4_3:4304777-4304796 | Msa0625280:intron | 15.0% |
| !!! | TTTTTTACTGAAAATCATAA+GGG | + | chr4_3:4304778-4304797 | Msa0625280:intron | 15.0% |
| !!! | TCAACAATAAATATCATTTT+CGG | + | chr4_3:4304828-4304847 | Msa0625280:intron | 15.0% |
| !! | TAAATATATTGCACAATTTA+TGG | - | chr4_3:4305295-4305314 | None:intergenic | 15.0% |
| !!! | CATAGTATTATGTTTTAAAA+TGG | + | chr4_3:4304512-4304531 | Msa0625280:intron | 15.0% |
| !! | AAAAAAATTATGTTCAAGTA+AGG | - | chr4_3:4304764-4304783 | None:intergenic | 15.0% |
| !!! | TTTTTTTACTGAAAATCATA+AGG | + | chr4_3:4304777-4304796 | Msa0625280:intron | 15.0% |
| !!! | TTTTTTACTGAAAATCATAA+GGG | + | chr4_3:4304778-4304797 | Msa0625280:intron | 15.0% |
| !!! | TCAACAATAAATATCATTTT+CGG | + | chr4_3:4304828-4304847 | Msa0625280:intron | 15.0% |
| !! | TAAATATATTGCACAATTTA+TGG | - | chr4_3:4305295-4305314 | None:intergenic | 15.0% |
| !!! | TTATGTTTTAAAATGGTCAA+TGG | + | chr4_3:4304519-4304538 | Msa0625280:intron | 20.0% |
| !!! | TTCTCATCATAATTTTCTTT+GGG | - | chr4_3:4304628-4304647 | None:intergenic | 20.0% |
| !!! | ATTCTCATCATAATTTTCTT+TGG | - | chr4_3:4304629-4304648 | None:intergenic | 20.0% |
| !! | ATTATAGTAAATGAGTATCT+GGG | + | chr4_3:4304695-4304714 | Msa0625280:intron | 20.0% |
| !! | GAGTATTATAACAATATGAA+TGG | + | chr4_3:4305062-4305081 | Msa0625280:intron | 20.0% |
| !!! | GATTTTGAAAGAGAAAAAAA+AGG | - | chr4_3:4305217-4305236 | None:intergenic | 20.0% |
| !! | AACTAAAACCAAAAAGATTA+AGG | - | chr4_3:4305270-4305289 | None:intergenic | 20.0% |
| !!! | TTATGTTTTAAAATGGTCAA+TGG | + | chr4_3:4304519-4304538 | Msa0625280:intron | 20.0% |
| !!! | TTCTCATCATAATTTTCTTT+GGG | - | chr4_3:4304628-4304647 | None:intergenic | 20.0% |
| !!! | ATTCTCATCATAATTTTCTT+TGG | - | chr4_3:4304629-4304648 | None:intergenic | 20.0% |
| !! | ATTATAGTAAATGAGTATCT+GGG | + | chr4_3:4304695-4304714 | Msa0625280:intron | 20.0% |
| !! | GAGTATTATAACAATATGAA+TGG | + | chr4_3:4305062-4305081 | Msa0625280:intron | 20.0% |
| !!! | GATTTTGAAAGAGAAAAAAA+AGG | - | chr4_3:4305217-4305236 | None:intergenic | 20.0% |
| !! | AACTAAAACCAAAAAGATTA+AGG | - | chr4_3:4305270-4305289 | None:intergenic | 20.0% |
| ! | GATTATAGTAAATGAGTATC+TGG | + | chr4_3:4304694-4304713 | Msa0625280:intron | 25.0% |
| !! | ATAAATATCATTTTCGGCAA+TGG | + | chr4_3:4304834-4304853 | Msa0625280:intron | 25.0% |
| !! | TAAATATCATTTTCGGCAAT+GGG | + | chr4_3:4304835-4304854 | Msa0625280:intron | 25.0% |
| !!! | TTTTTGGTTTACATTTCCTA+AGG | + | chr4_3:4304912-4304931 | Msa0625280:intron | 25.0% |
| ! | TAATACAAAATCCCCTAATT+TGG | - | chr4_3:4305128-4305147 | None:intergenic | 25.0% |
| ! | TTGAAAGAGAAAAAAAAGGA+AGG | - | chr4_3:4305213-4305232 | None:intergenic | 25.0% |
| ! | AAAAGATTAAGGATCTGTTT+CGG | - | chr4_3:4305259-4305278 | None:intergenic | 25.0% |
| !! | AAACAGATCCTTAATCTTTT+TGG | + | chr4_3:4305259-4305278 | Msa0625280:intron | 25.0% |
| ! | TCATTTACTTCTTGATCATT+AGG | - | chr4_3:4305376-4305395 | None:intergenic | 25.0% |
| ! | AATGATCAAGAAGTAAATGA+TGG | + | chr4_3:4305376-4305395 | Msa0625280:CDS | 25.0% |
| ! | ATGATCAAGAAGTAAATGAT+GGG | + | chr4_3:4305377-4305396 | Msa0625280:CDS | 25.0% |
| ! | GTGAGATTTATTAGAAATCT+TGG | - | chr4_3:4305509-4305528 | None:intergenic | 25.0% |
| ! | CATTATGATATTCCTAAAGT+TGG | + | chr4_3:4305577-4305596 | Msa0625280:CDS | 25.0% |
| ! | ACAAACAAATACAAATGACA+GGG | - | chr4_3:4305647-4305666 | None:intergenic | 25.0% |
| ! | AACAAACAAATACAAATGAC+AGG | - | chr4_3:4305648-4305667 | None:intergenic | 25.0% |
| ! | GATTATAGTAAATGAGTATC+TGG | + | chr4_3:4304694-4304713 | Msa0625280:intron | 25.0% |
| !! | ATAAATATCATTTTCGGCAA+TGG | + | chr4_3:4304834-4304853 | Msa0625280:intron | 25.0% |
| !! | TAAATATCATTTTCGGCAAT+GGG | + | chr4_3:4304835-4304854 | Msa0625280:intron | 25.0% |
| !!! | TTTTTGGTTTACATTTCCTA+AGG | + | chr4_3:4304912-4304931 | Msa0625280:intron | 25.0% |
| ! | TAATACAAAATCCCCTAATT+TGG | - | chr4_3:4305128-4305147 | None:intergenic | 25.0% |
| ! | TTGAAAGAGAAAAAAAAGGA+AGG | - | chr4_3:4305213-4305232 | None:intergenic | 25.0% |
| ! | AAAAGATTAAGGATCTGTTT+CGG | - | chr4_3:4305259-4305278 | None:intergenic | 25.0% |
| !! | AAACAGATCCTTAATCTTTT+TGG | + | chr4_3:4305259-4305278 | Msa0625280:intron | 25.0% |
| ! | TCATTTACTTCTTGATCATT+AGG | - | chr4_3:4305376-4305395 | None:intergenic | 25.0% |
| ! | AATGATCAAGAAGTAAATGA+TGG | + | chr4_3:4305376-4305395 | Msa0625280:CDS | 25.0% |
| ! | ATGATCAAGAAGTAAATGAT+GGG | + | chr4_3:4305377-4305396 | Msa0625280:CDS | 25.0% |
| ! | GTGAGATTTATTAGAAATCT+TGG | - | chr4_3:4305509-4305528 | None:intergenic | 25.0% |
| ! | CATTATGATATTCCTAAAGT+TGG | + | chr4_3:4305577-4305596 | Msa0625280:CDS | 25.0% |
| ! | ACAAACAAATACAAATGACA+GGG | - | chr4_3:4305647-4305666 | None:intergenic | 25.0% |
| ! | AACAAACAAATACAAATGAC+AGG | - | chr4_3:4305648-4305667 | None:intergenic | 25.0% |
| ! | ATAAGATGTTTTACTTGGCT+AGG | - | chr4_3:4304433-4304452 | None:intergenic | 30.0% |
| TAGCCAAGTAAAACATCTTA+TGG | + | chr4_3:4304432-4304451 | Msa0625280:intron | 30.0% | |
| ! | ACACCATAAGATGTTTTACT+TGG | - | chr4_3:4304438-4304457 | None:intergenic | 30.0% |
| AGTAAAACATCTTATGGTGT+TGG | + | chr4_3:4304438-4304457 | Msa0625280:intron | 30.0% | |
| GTATGATGTAACAAGAATCA+AGG | - | chr4_3:4304489-4304508 | None:intergenic | 30.0% | |
| ! | ATAATTTTCTTTGGGTCAGA+AGG | - | chr4_3:4304620-4304639 | None:intergenic | 30.0% |
| ! | TGTATGAATTTTGCAAGAAC+AGG | + | chr4_3:4304650-4304669 | Msa0625280:intron | 30.0% |
| ! | TTTGTAGTCACTGTTCTTTT+TGG | + | chr4_3:4304896-4304915 | Msa0625280:intron | 30.0% |
| GAAGGACTCAAAAAATGTAT+TGG | - | chr4_3:4305106-4305125 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTCCTTCCAAATT+AGG | + | chr4_3:4305112-4305131 | Msa0625280:intron | 30.0% |
| !! | TTTTGAGTCCTTCCAAATTA+GGG | + | chr4_3:4305113-4305132 | Msa0625280:intron | 30.0% |
| AAAGAGAAAAAAAAGGAAGG+AGG | - | chr4_3:4305210-4305229 | None:intergenic | 30.0% | |
| !! | GTGCCATTTGTATTTAATGT+AGG | + | chr4_3:4305325-4305344 | Msa0625280:intron | 30.0% |
| CCACCTACATTAAATACAAA+TGG | - | chr4_3:4305331-4305350 | None:intergenic | 30.0% | |
| CCATTTGTATTTAATGTAGG+TGG | + | chr4_3:4305328-4305347 | Msa0625280:intron | 30.0% | |
| CAAACAAATACAAATGACAG+GGG | - | chr4_3:4305646-4305665 | None:intergenic | 30.0% | |
| ! | TTTGACTTAGATTCTGTTGA+TGG | + | chr4_3:4305757-4305776 | Msa0625280:three_prime_UTR | 30.0% |
| TTGACTTAGATTCTGTTGAT+GGG | + | chr4_3:4305758-4305777 | Msa0625280:three_prime_UTR | 30.0% | |
| ! | ATAAGATGTTTTACTTGGCT+AGG | - | chr4_3:4304433-4304452 | None:intergenic | 30.0% |
| TAGCCAAGTAAAACATCTTA+TGG | + | chr4_3:4304432-4304451 | Msa0625280:intron | 30.0% | |
| ! | ACACCATAAGATGTTTTACT+TGG | - | chr4_3:4304438-4304457 | None:intergenic | 30.0% |
| AGTAAAACATCTTATGGTGT+TGG | + | chr4_3:4304438-4304457 | Msa0625280:intron | 30.0% | |
| GTATGATGTAACAAGAATCA+AGG | - | chr4_3:4304489-4304508 | None:intergenic | 30.0% | |
| ! | ATAATTTTCTTTGGGTCAGA+AGG | - | chr4_3:4304620-4304639 | None:intergenic | 30.0% |
| ! | TGTATGAATTTTGCAAGAAC+AGG | + | chr4_3:4304650-4304669 | Msa0625280:intron | 30.0% |
| ! | TTTGTAGTCACTGTTCTTTT+TGG | + | chr4_3:4304896-4304915 | Msa0625280:intron | 30.0% |
| GAAGGACTCAAAAAATGTAT+TGG | - | chr4_3:4305106-4305125 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTCCTTCCAAATT+AGG | + | chr4_3:4305112-4305131 | Msa0625280:intron | 30.0% |
| !! | TTTTGAGTCCTTCCAAATTA+GGG | + | chr4_3:4305113-4305132 | Msa0625280:intron | 30.0% |
| AAAGAGAAAAAAAAGGAAGG+AGG | - | chr4_3:4305210-4305229 | None:intergenic | 30.0% | |
| !! | GTGCCATTTGTATTTAATGT+AGG | + | chr4_3:4305325-4305344 | Msa0625280:intron | 30.0% |
| CCACCTACATTAAATACAAA+TGG | - | chr4_3:4305331-4305350 | None:intergenic | 30.0% | |
| CCATTTGTATTTAATGTAGG+TGG | + | chr4_3:4305328-4305347 | Msa0625280:intron | 30.0% | |
| CAAACAAATACAAATGACAG+GGG | - | chr4_3:4305646-4305665 | None:intergenic | 30.0% | |
| ! | TTTGACTTAGATTCTGTTGA+TGG | + | chr4_3:4305757-4305776 | Msa0625280:three_prime_UTR | 30.0% |
| TTGACTTAGATTCTGTTGAT+GGG | + | chr4_3:4305758-4305777 | Msa0625280:three_prime_UTR | 30.0% | |
| TCATTGTTGCACAGATATGT+CGG | + | chr4_3:4304251-4304270 | Msa0625280:CDS | 35.0% | |
| TCAAATCACCTAGATTGCAA+TGG | - | chr4_3:4304676-4304695 | None:intergenic | 35.0% | |
| AATCAACTAGGTTGCATAAC+AGG | - | chr4_3:4304877-4304896 | None:intergenic | 35.0% | |
| CAGTGACTACAAAATCAACT+AGG | - | chr4_3:4304889-4304908 | None:intergenic | 35.0% | |
| GGACTCAAAAAATGTATTGG+AGG | - | chr4_3:4305103-4305122 | None:intergenic | 35.0% | |
| TTTGAGTCCTTCCAAATTAG+GGG | + | chr4_3:4305114-4305133 | Msa0625280:intron | 35.0% | |
| ACAAAATCCCCTAATTTGGA+AGG | - | chr4_3:4305124-4305143 | None:intergenic | 35.0% | |
| AAAAAAAAGGAAGGAGGAAG+TGG | - | chr4_3:4305204-4305223 | None:intergenic | 35.0% | |
| AGATGATCATCATAATGAGC+AGG | - | chr4_3:4305427-4305446 | None:intergenic | 35.0% | |
| GCAACTTGATGTTCATAGAT+TGG | + | chr4_3:4305483-4305502 | Msa0625280:CDS | 35.0% | |
| ! | ATATTCCTAAAGTTGGTCCT+GGG | + | chr4_3:4305584-4305603 | Msa0625280:CDS | 35.0% |
| GAGTTGTTCAAGTATGAAGA+AGG | + | chr4_3:4305616-4305635 | Msa0625280:three_prime_UTR | 35.0% | |
| TGACTTAGATTCTGTTGATG+GGG | + | chr4_3:4305759-4305778 | Msa0625280:three_prime_UTR | 35.0% | |
| TCATTGTTGCACAGATATGT+CGG | + | chr4_3:4304251-4304270 | Msa0625280:CDS | 35.0% | |
| TCAAATCACCTAGATTGCAA+TGG | - | chr4_3:4304676-4304695 | None:intergenic | 35.0% | |
| AATCAACTAGGTTGCATAAC+AGG | - | chr4_3:4304877-4304896 | None:intergenic | 35.0% | |
| CAGTGACTACAAAATCAACT+AGG | - | chr4_3:4304889-4304908 | None:intergenic | 35.0% | |
| GGACTCAAAAAATGTATTGG+AGG | - | chr4_3:4305103-4305122 | None:intergenic | 35.0% | |
| TTTGAGTCCTTCCAAATTAG+GGG | + | chr4_3:4305114-4305133 | Msa0625280:intron | 35.0% | |
| ACAAAATCCCCTAATTTGGA+AGG | - | chr4_3:4305124-4305143 | None:intergenic | 35.0% | |
| AAAAAAAAGGAAGGAGGAAG+TGG | - | chr4_3:4305204-4305223 | None:intergenic | 35.0% | |
| AGATGATCATCATAATGAGC+AGG | - | chr4_3:4305427-4305446 | None:intergenic | 35.0% | |
| GCAACTTGATGTTCATAGAT+TGG | + | chr4_3:4305483-4305502 | Msa0625280:CDS | 35.0% | |
| ! | ATATTCCTAAAGTTGGTCCT+GGG | + | chr4_3:4305584-4305603 | Msa0625280:CDS | 35.0% |
| GAGTTGTTCAAGTATGAAGA+AGG | + | chr4_3:4305616-4305635 | Msa0625280:three_prime_UTR | 35.0% | |
| TGACTTAGATTCTGTTGATG+GGG | + | chr4_3:4305759-4305778 | Msa0625280:three_prime_UTR | 35.0% | |
| TCGGCATATGAGAATGTTGT+TGG | + | chr4_3:4304270-4304289 | Msa0625280:CDS | 40.0% | |
| GCATATGAGAATGTTGTTGG+TGG | + | chr4_3:4304273-4304292 | Msa0625280:CDS | 40.0% | |
| ACTGAAGATGAAATCTCAGC+AGG | + | chr4_3:4304393-4304412 | Msa0625280:CDS | 40.0% | |
| TTCTGTTTGATGTGCTGCAA+TGG | + | chr4_3:4304542-4304561 | Msa0625280:intron | 40.0% | |
| CTGAAAATCATAAGGGACAG+TGG | + | chr4_3:4304785-4304804 | Msa0625280:intron | 40.0% | |
| ! | GCAATGGGTTTCAGTAAACA+GGG | + | chr4_3:4304850-4304869 | Msa0625280:intron | 40.0% |
| TAAGGATCTGTTTCGGAGTT+TGG | - | chr4_3:4305252-4305271 | None:intergenic | 40.0% | |
| TGAAATCCTGGATTCTATCG+CGG | - | chr4_3:4305531-4305550 | None:intergenic | 40.0% | |
| ! | CGAGATATTGGTTGAAATCC+TGG | - | chr4_3:4305543-4305562 | None:intergenic | 40.0% |
| ! | GATATTCCTAAAGTTGGTCC+TGG | + | chr4_3:4305583-4305602 | Msa0625280:CDS | 40.0% |
| AGAGCTATTGTGCAAGCATA+TGG | - | chr4_3:4305682-4305701 | None:intergenic | 40.0% | |
| TCGGCATATGAGAATGTTGT+TGG | + | chr4_3:4304270-4304289 | Msa0625280:CDS | 40.0% | |
| GCATATGAGAATGTTGTTGG+TGG | + | chr4_3:4304273-4304292 | Msa0625280:CDS | 40.0% | |
| ACTGAAGATGAAATCTCAGC+AGG | + | chr4_3:4304393-4304412 | Msa0625280:CDS | 40.0% | |
| TTCTGTTTGATGTGCTGCAA+TGG | + | chr4_3:4304542-4304561 | Msa0625280:intron | 40.0% | |
| CTGAAAATCATAAGGGACAG+TGG | + | chr4_3:4304785-4304804 | Msa0625280:intron | 40.0% | |
| ! | GCAATGGGTTTCAGTAAACA+GGG | + | chr4_3:4304850-4304869 | Msa0625280:intron | 40.0% |
| TAAGGATCTGTTTCGGAGTT+TGG | - | chr4_3:4305252-4305271 | None:intergenic | 40.0% | |
| TGAAATCCTGGATTCTATCG+CGG | - | chr4_3:4305531-4305550 | None:intergenic | 40.0% | |
| ! | CGAGATATTGGTTGAAATCC+TGG | - | chr4_3:4305543-4305562 | None:intergenic | 40.0% |
| ! | GATATTCCTAAAGTTGGTCC+TGG | + | chr4_3:4305583-4305602 | Msa0625280:CDS | 40.0% |
| AGAGCTATTGTGCAAGCATA+TGG | - | chr4_3:4305682-4305701 | None:intergenic | 40.0% | |
| TGGTGGTAAACTGAAGCTGA+AGG | + | chr4_3:4304290-4304309 | Msa0625280:CDS | 45.0% | |
| GGTGGTAAACTGAAGCTGAA+GGG | + | chr4_3:4304291-4304310 | Msa0625280:CDS | 45.0% | |
| ! | GAAGCTGAAGGGAAAAGCAT+TGG | + | chr4_3:4304302-4304321 | Msa0625280:CDS | 45.0% |
| !! | GGAAAAGCATTGGATGTTGC+TGG | + | chr4_3:4304312-4304331 | Msa0625280:CDS | 45.0% |
| !! | AAAGCATTGGATGTTGCTGG+CGG | + | chr4_3:4304315-4304334 | Msa0625280:CDS | 45.0% |
| AGAACAGGCCATTGCAATCT+AGG | + | chr4_3:4304665-4304684 | Msa0625280:intron | 45.0% | |
| ! | GGCAATGGGTTTCAGTAAAC+AGG | + | chr4_3:4304849-4304868 | Msa0625280:intron | 45.0% |
| ACATTTCCTAAGGCTCCGTT+CGG | + | chr4_3:4304922-4304941 | Msa0625280:intron | 45.0% | |
| AAAAGGAAGGAGGAAGTGGA+GGG | - | chr4_3:4305200-4305219 | None:intergenic | 45.0% | |
| AAAAAGGAAGGAGGAAGTGG+AGG | - | chr4_3:4305201-4305220 | None:intergenic | 45.0% | |
| ATCTGTTTCGGAGTTTGGAG+GGG | - | chr4_3:4305247-4305266 | None:intergenic | 45.0% | |
| GATCTGTTTCGGAGTTTGGA+GGG | - | chr4_3:4305248-4305267 | None:intergenic | 45.0% | |
| ! | ATGATGGGAGTGAATTGAGC+AGG | + | chr4_3:4305392-4305411 | Msa0625280:CDS | 45.0% |
| TGATGGGAGTGAATTGAGCA+GGG | + | chr4_3:4305393-4305412 | Msa0625280:CDS | 45.0% | |
| ATCATCTTACACCAGCAGAG+AGG | + | chr4_3:4305440-4305459 | Msa0625280:CDS | 45.0% | |
| CGCTCATGTTTGCGAGATAT+TGG | - | chr4_3:4305555-4305574 | None:intergenic | 45.0% | |
| AATCACCCAGGACCAACTTT+AGG | - | chr4_3:4305592-4305611 | None:intergenic | 45.0% | |
| AACAACTCCTTGAATCACCC+AGG | - | chr4_3:4305604-4305623 | None:intergenic | 45.0% | |
| TGGTGGTAAACTGAAGCTGA+AGG | + | chr4_3:4304290-4304309 | Msa0625280:CDS | 45.0% | |
| GGTGGTAAACTGAAGCTGAA+GGG | + | chr4_3:4304291-4304310 | Msa0625280:CDS | 45.0% | |
| ! | GAAGCTGAAGGGAAAAGCAT+TGG | + | chr4_3:4304302-4304321 | Msa0625280:CDS | 45.0% |
| !! | GGAAAAGCATTGGATGTTGC+TGG | + | chr4_3:4304312-4304331 | Msa0625280:CDS | 45.0% |
| !! | AAAGCATTGGATGTTGCTGG+CGG | + | chr4_3:4304315-4304334 | Msa0625280:CDS | 45.0% |
| AGAACAGGCCATTGCAATCT+AGG | + | chr4_3:4304665-4304684 | Msa0625280:intron | 45.0% | |
| ! | GGCAATGGGTTTCAGTAAAC+AGG | + | chr4_3:4304849-4304868 | Msa0625280:intron | 45.0% |
| ACATTTCCTAAGGCTCCGTT+CGG | + | chr4_3:4304922-4304941 | Msa0625280:intron | 45.0% | |
| AAAAGGAAGGAGGAAGTGGA+GGG | - | chr4_3:4305200-4305219 | None:intergenic | 45.0% | |
| AAAAAGGAAGGAGGAAGTGG+AGG | - | chr4_3:4305201-4305220 | None:intergenic | 45.0% | |
| ATCTGTTTCGGAGTTTGGAG+GGG | - | chr4_3:4305247-4305266 | None:intergenic | 45.0% | |
| GATCTGTTTCGGAGTTTGGA+GGG | - | chr4_3:4305248-4305267 | None:intergenic | 45.0% | |
| ! | ATGATGGGAGTGAATTGAGC+AGG | + | chr4_3:4305392-4305411 | Msa0625280:CDS | 45.0% |
| TGATGGGAGTGAATTGAGCA+GGG | + | chr4_3:4305393-4305412 | Msa0625280:CDS | 45.0% | |
| ATCATCTTACACCAGCAGAG+AGG | + | chr4_3:4305440-4305459 | Msa0625280:CDS | 45.0% | |
| CGCTCATGTTTGCGAGATAT+TGG | - | chr4_3:4305555-4305574 | None:intergenic | 45.0% | |
| AATCACCCAGGACCAACTTT+AGG | - | chr4_3:4305592-4305611 | None:intergenic | 45.0% | |
| AACAACTCCTTGAATCACCC+AGG | - | chr4_3:4305604-4305623 | None:intergenic | 45.0% | |
| CATTTCCTAAGGCTCCGTTC+GGG | + | chr4_3:4304923-4304942 | Msa0625280:intron | 50.0% | |
| !! | GAGGGAATGGATGGCTTTGT+GGG | + | chr4_3:4304957-4304976 | Msa0625280:intron | 50.0% |
| !! | AGGGAATGGATGGCTTTGTG+GGG | + | chr4_3:4304958-4304977 | Msa0625280:intron | 50.0% |
| TGGAGGGAATAGAGGACTTC+GGG | - | chr4_3:4305184-4305203 | None:intergenic | 50.0% | |
| GTGGAGGGAATAGAGGACTT+CGG | - | chr4_3:4305185-4305204 | None:intergenic | 50.0% | |
| TTTCGGAGTTTGGAGGGGAA+GGG | - | chr4_3:4305242-4305261 | None:intergenic | 50.0% | |
| GGATCTGTTTCGGAGTTTGG+AGG | - | chr4_3:4305249-4305268 | None:intergenic | 50.0% | |
| ATCTTACACCAGCAGAGAGG+CGG | + | chr4_3:4305443-4305462 | Msa0625280:CDS | 50.0% | |
| ATCTCACCGCGATAGAATCC+AGG | + | chr4_3:4305522-4305541 | Msa0625280:CDS | 50.0% | |
| AGTTGGTCCTGGGTGATTCA+AGG | + | chr4_3:4305594-4305613 | Msa0625280:exon | 50.0% | |
| CATTTCCTAAGGCTCCGTTC+GGG | + | chr4_3:4304923-4304942 | Msa0625280:intron | 50.0% | |
| !! | GAGGGAATGGATGGCTTTGT+GGG | + | chr4_3:4304957-4304976 | Msa0625280:intron | 50.0% |
| !! | AGGGAATGGATGGCTTTGTG+GGG | + | chr4_3:4304958-4304977 | Msa0625280:intron | 50.0% |
| TGGAGGGAATAGAGGACTTC+GGG | - | chr4_3:4305184-4305203 | None:intergenic | 50.0% | |
| GTGGAGGGAATAGAGGACTT+CGG | - | chr4_3:4305185-4305204 | None:intergenic | 50.0% | |
| TTTCGGAGTTTGGAGGGGAA+GGG | - | chr4_3:4305242-4305261 | None:intergenic | 50.0% | |
| GGATCTGTTTCGGAGTTTGG+AGG | - | chr4_3:4305249-4305268 | None:intergenic | 50.0% | |
| ATCTTACACCAGCAGAGAGG+CGG | + | chr4_3:4305443-4305462 | Msa0625280:CDS | 50.0% | |
| ATCTCACCGCGATAGAATCC+AGG | + | chr4_3:4305522-4305541 | Msa0625280:CDS | 50.0% | |
| AGTTGGTCCTGGGTGATTCA+AGG | + | chr4_3:4305594-4305613 | Msa0625280:exon | 50.0% | |
| AAACTCCCGAACGGAGCCTT+AGG | - | chr4_3:4304931-4304950 | None:intergenic | 55.0% | |
| TAAGGCTCCGTTCGGGAGTT+TGG | + | chr4_3:4304930-4304949 | Msa0625280:intron | 55.0% | |
| TTTGGAGGGGAGGGAATGGA+TGG | + | chr4_3:4304948-4304967 | Msa0625280:intron | 55.0% | |
| ! | GGAGGGAATGGATGGCTTTG+TGG | + | chr4_3:4304956-4304975 | Msa0625280:intron | 55.0% |
| !! | GGGAATGGATGGCTTTGTGG+GGG | + | chr4_3:4304959-4304978 | Msa0625280:intron | 55.0% |
| !! | AATGGATGGCTTTGTGGGGG+AGG | + | chr4_3:4304962-4304981 | Msa0625280:intron | 55.0% |
| !! | ATGGATGGCTTTGTGGGGGA+GGG | + | chr4_3:4304963-4304982 | Msa0625280:intron | 55.0% |
| GGAATAGAGGACTTCGGGAG+GGG | - | chr4_3:4305179-4305198 | None:intergenic | 55.0% | |
| GGGAATAGAGGACTTCGGGA+GGG | - | chr4_3:4305180-4305199 | None:intergenic | 55.0% | |
| AGGGAATAGAGGACTTCGGG+AGG | - | chr4_3:4305181-4305200 | None:intergenic | 55.0% | |
| GGAGGAAGTGGAGGGAATAG+AGG | - | chr4_3:4305192-4305211 | None:intergenic | 55.0% | |
| GTTTCGGAGTTTGGAGGGGA+AGG | - | chr4_3:4305243-4305262 | None:intergenic | 55.0% | |
| TCTATGTACCGCCTCTCTGC+TGG | - | chr4_3:4305454-4305473 | None:intergenic | 55.0% | |
| AAACTCCCGAACGGAGCCTT+AGG | - | chr4_3:4304931-4304950 | None:intergenic | 55.0% | |
| TAAGGCTCCGTTCGGGAGTT+TGG | + | chr4_3:4304930-4304949 | Msa0625280:intron | 55.0% | |
| TTTGGAGGGGAGGGAATGGA+TGG | + | chr4_3:4304948-4304967 | Msa0625280:intron | 55.0% | |
| ! | GGAGGGAATGGATGGCTTTG+TGG | + | chr4_3:4304956-4304975 | Msa0625280:intron | 55.0% |
| !! | GGGAATGGATGGCTTTGTGG+GGG | + | chr4_3:4304959-4304978 | Msa0625280:intron | 55.0% |
| !! | AATGGATGGCTTTGTGGGGG+AGG | + | chr4_3:4304962-4304981 | Msa0625280:intron | 55.0% |
| !! | ATGGATGGCTTTGTGGGGGA+GGG | + | chr4_3:4304963-4304982 | Msa0625280:intron | 55.0% |
| GGAATAGAGGACTTCGGGAG+GGG | - | chr4_3:4305179-4305198 | None:intergenic | 55.0% | |
| GGGAATAGAGGACTTCGGGA+GGG | - | chr4_3:4305180-4305199 | None:intergenic | 55.0% | |
| AGGGAATAGAGGACTTCGGG+AGG | - | chr4_3:4305181-4305200 | None:intergenic | 55.0% | |
| GGAGGAAGTGGAGGGAATAG+AGG | - | chr4_3:4305192-4305211 | None:intergenic | 55.0% | |
| GTTTCGGAGTTTGGAGGGGA+AGG | - | chr4_3:4305243-4305262 | None:intergenic | 55.0% | |
| TCTATGTACCGCCTCTCTGC+TGG | - | chr4_3:4305454-4305473 | None:intergenic | 55.0% | |
| GCTCCGTTCGGGAGTTTGGA+GGG | + | chr4_3:4304934-4304953 | Msa0625280:intron | 60.0% | |
| CTCCGTTCGGGAGTTTGGAG+GGG | + | chr4_3:4304935-4304954 | Msa0625280:intron | 60.0% | |
| CTCCCCTCCAAACTCCCGAA+CGG | - | chr4_3:4304940-4304959 | None:intergenic | 60.0% | |
| GTTCGGGAGTTTGGAGGGGA+GGG | + | chr4_3:4304939-4304958 | Msa0625280:intron | 60.0% | |
| GGAGTTTGGAGGGGAGGGAA+TGG | + | chr4_3:4304944-4304963 | Msa0625280:intron | 60.0% | |
| ! | GGCTTTGTGGGGGAGGGAAA+TGG | + | chr4_3:4304969-4304988 | Msa0625280:intron | 60.0% |
| TAGAGGACTTCGGGAGGGGA+GGG | - | chr4_3:4305175-4305194 | None:intergenic | 60.0% | |
| ATAGAGGACTTCGGGAGGGG+AGG | - | chr4_3:4305176-4305195 | None:intergenic | 60.0% | |
| GCTCCGTTCGGGAGTTTGGA+GGG | + | chr4_3:4304934-4304953 | Msa0625280:intron | 60.0% | |
| CTCCGTTCGGGAGTTTGGAG+GGG | + | chr4_3:4304935-4304954 | Msa0625280:intron | 60.0% | |
| CTCCCCTCCAAACTCCCGAA+CGG | - | chr4_3:4304940-4304959 | None:intergenic | 60.0% | |
| GTTCGGGAGTTTGGAGGGGA+GGG | + | chr4_3:4304939-4304958 | Msa0625280:intron | 60.0% | |
| GGAGTTTGGAGGGGAGGGAA+TGG | + | chr4_3:4304944-4304963 | Msa0625280:intron | 60.0% | |
| ! | GGCTTTGTGGGGGAGGGAAA+TGG | + | chr4_3:4304969-4304988 | Msa0625280:intron | 60.0% |
| TAGAGGACTTCGGGAGGGGA+GGG | - | chr4_3:4305175-4305194 | None:intergenic | 60.0% | |
| ATAGAGGACTTCGGGAGGGG+AGG | - | chr4_3:4305176-4305195 | None:intergenic | 60.0% | |
| GGCTCCGTTCGGGAGTTTGG+AGG | + | chr4_3:4304933-4304952 | Msa0625280:intron | 65.0% | |
| CGTTCGGGAGTTTGGAGGGG+AGG | + | chr4_3:4304938-4304957 | Msa0625280:intron | 65.0% | |
| TTCGGGAGGGGAGGGCTTTG+GGG | - | chr4_3:4305167-4305186 | None:intergenic | 65.0% | |
| CTTCGGGAGGGGAGGGCTTT+GGG | - | chr4_3:4305168-4305187 | None:intergenic | 65.0% | |
| ACTTCGGGAGGGGAGGGCTT+TGG | - | chr4_3:4305169-4305188 | None:intergenic | 65.0% | |
| CGGAGTTTGGAGGGGAAGGG+AGG | - | chr4_3:4305239-4305258 | None:intergenic | 65.0% | |
| GGCTCCGTTCGGGAGTTTGG+AGG | + | chr4_3:4304933-4304952 | Msa0625280:intron | 65.0% | |
| CGTTCGGGAGTTTGGAGGGG+AGG | + | chr4_3:4304938-4304957 | Msa0625280:intron | 65.0% | |
| TTCGGGAGGGGAGGGCTTTG+GGG | - | chr4_3:4305167-4305186 | None:intergenic | 65.0% | |
| CTTCGGGAGGGGAGGGCTTT+GGG | - | chr4_3:4305168-4305187 | None:intergenic | 65.0% | |
| ACTTCGGGAGGGGAGGGCTT+TGG | - | chr4_3:4305169-4305188 | None:intergenic | 65.0% | |
| CGGAGTTTGGAGGGGAAGGG+AGG | - | chr4_3:4305239-4305258 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 4304202 | 4305905 | 4304202 | ID=Msa0625280;Name=Msa0625280 |
| chr4_3 | mRNA | 4304202 | 4305905 | 4304202 | ID=Msa0625280-mRNA-1;Parent=Msa0625280;Name=Msa0625280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=44|1|1|1|1|1|2|296|143 |
| chr4_3 | exon | 4304202 | 4304414 | 4304202 | ID=Msa0625280-mRNA-1:exon:1108;Parent=Msa0625280-mRNA-1 |
| chr4_3 | exon | 4305347 | 4305905 | 4305347 | ID=Msa0625280-mRNA-1:exon:1109;Parent=Msa0625280-mRNA-1 |
| chr4_3 | five_prime_UTR | 4304202 | 4304245 | 4304202 | ID=Msa0625280-mRNA-1:five_prime_utr;Parent=Msa0625280-mRNA-1 |
| chr4_3 | CDS | 4304246 | 4304414 | 4304246 | ID=Msa0625280-mRNA-1:cds;Parent=Msa0625280-mRNA-1 |
| chr4_3 | CDS | 4305347 | 4305609 | 4305347 | ID=Msa0625280-mRNA-1:cds;Parent=Msa0625280-mRNA-1 |
| chr4_3 | three_prime_UTR | 4305610 | 4305905 | 4305610 | ID=Msa0625280-mRNA-1:three_prime_utr;Parent=Msa0625280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
