Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76027.t1 | XP_013443292.1 | 88.7 | 424 | 41 | 2 | 1 | 422 | 1 | 419 | 2.50E-198 | 701.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76027.t1 | Q9FFX0 | 45.7 | 381 | 173 | 5 | 33 | 404 | 67 | 422 | 4.3e-82 | 306.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76027.t1 | A0A072TIS5 | 88.7 | 424 | 41 | 2 | 1 | 422 | 1 | 419 | 1.8e-198 | 701.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene76027 | 0.820209 | 7.74E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene76027 | 0.844284 | 8.31E-59 | -1.69E-46 |
| MS.gene049173 | MS.gene76027 | 0.803602 | 3.22E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene76027 | 0.822119 | 2.81E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene76027 | 0.857357 | 1.72E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene76027 | 0.865039 | 7.88E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene76027 | 0.855932 | 4.53E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene76027 | 0.875686 | 2.53E-68 | -1.69E-46 |
| MS.gene049356 | MS.gene76027 | 0.801944 | 7.09E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene76027 | 0.836792 | 7.60E-57 | -1.69E-46 |
| MS.gene049396 | MS.gene76027 | 0.848995 | 4.29E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene76027 | 0.807922 | 3.99E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene76027 | 0.909021 | 9.02E-82 | -1.69E-46 |
| MS.gene049615 | MS.gene76027 | 0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene76027 | 0.846153 | 2.60E-59 | -1.69E-46 |
| MS.gene049656 | MS.gene76027 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene76027 | 0.881355 | 2.57E-70 | -1.69E-46 |
| MS.gene05010 | MS.gene76027 | 0.859239 | 4.75E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene76027 | 0.80865 | 2.79E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene76027 | 0.839427 | 1.59E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene76027 | 0.853791 | 1.89E-61 | -1.69E-46 |
| MS.gene050333 | MS.gene76027 | 0.81775 | 2.80E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene76027 | 0.834937 | 2.25E-56 | -1.69E-46 |
| MS.gene050499 | MS.gene76027 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene76027 | 0.869063 | 4.10E-66 | -1.69E-46 |
| MS.gene050504 | MS.gene76027 | 0.846385 | 2.25E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene76027 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene050520 | MS.gene76027 | 0.823238 | 1.54E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene76027 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene76027 | 0.839093 | 1.95E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene76027 | 0.889703 | 1.91E-73 | -1.69E-46 |
| MS.gene050612 | MS.gene76027 | 0.848438 | 6.13E-60 | -1.69E-46 |
| MS.gene050662 | MS.gene76027 | 0.824426 | 8.12E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene76027 | 0.855823 | 4.87E-62 | -1.69E-46 |
| MS.gene050686 | MS.gene76027 | 0.825102 | 5.63E-54 | -1.69E-46 |
| MS.gene050690 | MS.gene76027 | 0.800715 | 1.27E-48 | -1.69E-46 |
| MS.gene050697 | MS.gene76027 | 0.812871 | 3.41E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene76027 | 0.866107 | 3.63E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene76027 | 0.877457 | 6.19E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene76027 | 0.908797 | 1.15E-81 | -1.69E-46 |
| MS.gene05080 | MS.gene76027 | 0.827398 | 1.60E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene76027 | 0.821902 | 3.15E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene76027 | 0.843967 | 1.01E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene76027 | 0.84568 | 3.49E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene76027 | 0.873017 | 2.04E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene76027 | 0.869998 | 2.03E-66 | -1.69E-46 |
| MS.gene05105 | MS.gene76027 | 0.830196 | 3.36E-55 | -1.69E-46 |
| MS.gene051113 | MS.gene76027 | -0.802998 | 4.30E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene76027 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene76027 | 0.842597 | 2.35E-58 | -1.69E-46 |
| MS.gene051509 | MS.gene76027 | 0.863666 | 2.12E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene76027 | 0.858799 | 6.43E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene76027 | 0.8209 | 5.37E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene76027 | 0.861046 | 1.35E-63 | -1.69E-46 |
| MS.gene051694 | MS.gene76027 | 0.823708 | 1.20E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene76027 | 0.820651 | 6.13E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene76027 | 0.862347 | 5.40E-64 | -1.69E-46 |
| MS.gene051858 | MS.gene76027 | 0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene76027 | 0.830722 | 2.50E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene76027 | 0.814967 | 1.18E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene76027 | 0.857194 | 1.93E-62 | -1.69E-46 |
| MS.gene052271 | MS.gene76027 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene052318 | MS.gene76027 | 0.825696 | 4.07E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene76027 | 0.860274 | 2.32E-63 | -1.69E-46 |
| MS.gene052414 | MS.gene76027 | 0.84526 | 4.54E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene76027 | 0.853287 | 2.64E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene76027 | 0.823375 | 1.43E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene76027 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene76027 | 0.829332 | 5.46E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene76027 | 0.824683 | 7.07E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene76027 | 0.863533 | 2.33E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene76027 | 0.884599 | 1.67E-71 | -1.69E-46 |
| MS.gene052504 | MS.gene76027 | 0.850756 | 1.38E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene76027 | 0.857071 | 2.09E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene76027 | 0.860369 | 2.17E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene76027 | 0.87618 | 1.71E-68 | -1.69E-46 |
| MS.gene052820 | MS.gene76027 | 0.818847 | 1.58E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene76027 | 0.865258 | 6.73E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene76027 | 0.881313 | 2.66E-70 | -1.69E-46 |
| MS.gene052825 | MS.gene76027 | 0.873623 | 1.27E-67 | -1.69E-46 |
| MS.gene052916 | MS.gene76027 | 0.82429 | 8.74E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene76027 | 0.869155 | 3.83E-66 | -1.69E-46 |
| MS.gene052982 | MS.gene76027 | 0.861909 | 7.36E-64 | -1.69E-46 |
| MS.gene053018 | MS.gene76027 | 0.820497 | 6.65E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene76027 | 0.819506 | 1.12E-52 | -1.69E-46 |
| MS.gene053117 | MS.gene76027 | 0.805301 | 1.43E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene76027 | 0.875616 | 2.68E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene76027 | 0.878461 | 2.76E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene76027 | 0.907015 | 7.99E-81 | -1.69E-46 |
| MS.gene053286 | MS.gene76027 | 0.902998 | 5.46E-79 | -1.69E-46 |
| MS.gene053436 | MS.gene76027 | 0.893819 | 4.40E-75 | -1.69E-46 |
| MS.gene053449 | MS.gene76027 | 0.861365 | 1.08E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene76027 | 0.827122 | 1.86E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene76027 | 0.834162 | 3.52E-56 | -1.69E-46 |
| MS.gene053505 | MS.gene76027 | 0.811854 | 5.68E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene76027 | 0.90948 | 5.43E-82 | -1.69E-46 |
| MS.gene053626 | MS.gene76027 | 0.848614 | 5.48E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene76027 | 0.831124 | 1.99E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene76027 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene76027 | 0.859129 | 5.12E-63 | -1.69E-46 |
| MS.gene053912 | MS.gene76027 | 0.832958 | 7.02E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene76027 | 0.834991 | 2.18E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene76027 | 0.809918 | 1.49E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene76027 | 0.834416 | 3.04E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene76027 | 0.858659 | 7.08E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene76027 | 0.866788 | 2.21E-65 | -1.69E-46 |
| MS.gene054642 | MS.gene76027 | 0.856289 | 3.56E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene76027 | -0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene76027 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene76027 | 0.861448 | 1.02E-63 | -1.69E-46 |
| MS.gene05494 | MS.gene76027 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene76027 | 0.853376 | 2.49E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene76027 | 0.863643 | 2.15E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene76027 | 0.851402 | 9.09E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene76027 | 0.82072 | 5.91E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene76027 | 0.849718 | 2.70E-60 | -1.69E-46 |
| MS.gene055289 | MS.gene76027 | 0.854779 | 9.81E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene76027 | 0.886182 | 4.27E-72 | -1.69E-46 |
| MS.gene055502 | MS.gene76027 | 0.862747 | 4.07E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene76027 | 0.858389 | 8.52E-63 | -1.69E-46 |
| MS.gene055629 | MS.gene76027 | 0.828436 | 9.00E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene76027 | 0.831725 | 1.42E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene76027 | 0.892899 | 1.04E-74 | -1.69E-46 |
| MS.gene055741 | MS.gene76027 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene76027 | 0.803319 | 3.69E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene76027 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene76027 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene76027 | 0.844625 | 6.73E-59 | -1.69E-46 |
| MS.gene055909 | MS.gene76027 | 0.847514 | 1.10E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene76027 | 0.844757 | 6.21E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene76027 | 0.836241 | 1.05E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene76027 | 0.858365 | 8.66E-63 | -1.69E-46 |
| MS.gene05601 | MS.gene76027 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene76027 | 0.821597 | 3.71E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene76027 | 0.807212 | 5.64E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene76027 | 0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene76027 | 0.857786 | 1.29E-62 | -1.69E-46 |
| MS.gene056374 | MS.gene76027 | 0.872461 | 3.12E-67 | -1.69E-46 |
| MS.gene056422 | MS.gene76027 | 0.843942 | 1.03E-58 | -1.69E-46 |
| MS.gene056446 | MS.gene76027 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene76027 | 0.843414 | 1.42E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene76027 | 0.829071 | 6.32E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene76027 | 0.887587 | 1.25E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene76027 | 0.849574 | 2.96E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene76027 | 0.85691 | 2.34E-62 | -1.69E-46 |
| MS.gene056549 | MS.gene76027 | 0.804838 | 1.78E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene76027 | 0.834385 | 3.09E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene76027 | 0.874657 | 5.69E-68 | -1.69E-46 |
| MS.gene05666 | MS.gene76027 | 0.849772 | 2.61E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene76027 | 0.812968 | 3.25E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene76027 | 0.85001 | 2.24E-60 | -1.69E-46 |
| MS.gene056878 | MS.gene76027 | 0.840151 | 1.03E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene76027 | 0.80047 | 1.42E-48 | -1.69E-46 |
| MS.gene057019 | MS.gene76027 | 0.820053 | 8.41E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene76027 | 0.862054 | 6.65E-64 | -1.69E-46 |
| MS.gene057086 | MS.gene76027 | 0.881333 | 2.62E-70 | -1.69E-46 |
| MS.gene057124 | MS.gene76027 | 0.820368 | 7.12E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene76027 | 0.88627 | 3.96E-72 | -1.69E-46 |
| MS.gene057416 | MS.gene76027 | 0.88375 | 3.44E-71 | -1.69E-46 |
| MS.gene057658 | MS.gene76027 | 0.831461 | 1.65E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene76027 | 0.864363 | 1.28E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene76027 | 0.825396 | 4.80E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene76027 | 0.887955 | 9.05E-73 | -1.69E-46 |
| MS.gene057857 | MS.gene76027 | 0.829222 | 5.81E-55 | -1.69E-46 |
| MS.gene05787 | MS.gene76027 | 0.817405 | 3.35E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene76027 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene76027 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene76027 | 0.869074 | 4.06E-66 | -1.69E-46 |
| MS.gene058130 | MS.gene76027 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene76027 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene76027 | 0.815224 | 1.03E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene76027 | 0.833831 | 4.25E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene76027 | 0.854676 | 1.05E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene76027 | 0.875356 | 3.29E-68 | -1.69E-46 |
| MS.gene058444 | MS.gene76027 | 0.802046 | 6.76E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene76027 | 0.858851 | 6.20E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene76027 | 0.811527 | 6.69E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene76027 | 0.813406 | 2.60E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene76027 | 0.836033 | 1.19E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene76027 | 0.878401 | 2.89E-69 | -1.69E-46 |
| MS.gene05883 | MS.gene76027 | 0.852678 | 3.94E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene76027 | 0.807274 | 5.48E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene76027 | 0.863797 | 1.93E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene76027 | 0.844343 | 8.02E-59 | -1.69E-46 |
| MS.gene059129 | MS.gene76027 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene05913 | MS.gene76027 | 0.833884 | 4.13E-56 | -1.69E-46 |
| MS.gene059305 | MS.gene76027 | 0.838679 | 2.49E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene76027 | 0.834797 | 2.44E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene76027 | 0.864401 | 1.25E-64 | -1.69E-46 |
| MS.gene059368 | MS.gene76027 | 0.829911 | 3.95E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene76027 | 0.866441 | 2.85E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene76027 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene76027 | 0.840002 | 1.13E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene76027 | 0.838566 | 2.66E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene76027 | 0.844459 | 7.46E-59 | -1.69E-46 |
| MS.gene059680 | MS.gene76027 | 0.831141 | 1.97E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene76027 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene76027 | 0.875254 | 3.56E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene76027 | 0.834015 | 3.83E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene76027 | 0.835094 | 2.05E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene76027 | 0.871497 | 6.54E-67 | -1.69E-46 |
| MS.gene059902 | MS.gene76027 | 0.817219 | 3.69E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene76027 | 0.843729 | 1.17E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene76027 | 0.81732 | 3.51E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene76027 | 0.821143 | 4.72E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene76027 | 0.835109 | 2.03E-56 | -1.69E-46 |
| MS.gene060469 | MS.gene76027 | 0.8118 | 5.84E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene76027 | 0.877125 | 8.07E-69 | -1.69E-46 |
| MS.gene060485 | MS.gene76027 | 0.835445 | 1.67E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene76027 | 0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene76027 | 0.855135 | 7.73E-62 | -1.69E-46 |
| MS.gene060778 | MS.gene76027 | 0.852563 | 4.25E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene76027 | 0.862647 | 4.37E-64 | -1.69E-46 |
| MS.gene060804 | MS.gene76027 | 0.84728 | 1.28E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene76027 | 0.809978 | 1.45E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene76027 | 0.912557 | 1.70E-83 | -1.69E-46 |
| MS.gene060837 | MS.gene76027 | 0.865728 | 4.78E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene76027 | 0.848349 | 6.49E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene76027 | 0.854006 | 1.64E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene76027 | 0.864157 | 1.49E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene76027 | 0.819587 | 1.07E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene76027 | 0.823603 | 1.27E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene76027 | 0.832991 | 6.89E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene76027 | 0.818242 | 2.17E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76027.t1 | MTR_0024s0260 | 90.824 | 425 | 32 | 2 | 1 | 423 | 1 | 420 | 0.0 | 773 |
| MS.gene76027.t1 | MTR_0024s0260 | 92.285 | 337 | 24 | 1 | 1 | 335 | 1 | 337 | 0.0 | 634 |
| MS.gene76027.t1 | MTR_2g081010 | 31.343 | 134 | 91 | 1 | 204 | 337 | 144 | 276 | 2.89e-14 | 73.2 |
| MS.gene76027.t1 | MTR_2g081010 | 31.013 | 158 | 108 | 1 | 204 | 361 | 144 | 300 | 4.10e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76027.t1 | AT5G38510 | 45.301 | 415 | 173 | 10 | 1 | 404 | 51 | 422 | 5.42e-111 | 333 |
| MS.gene76027.t1 | AT5G38510 | 45.301 | 415 | 173 | 10 | 1 | 404 | 51 | 422 | 5.42e-111 | 333 |
| MS.gene76027.t1 | AT5G38510 | 45.301 | 415 | 173 | 10 | 1 | 404 | 51 | 422 | 5.42e-111 | 333 |
| MS.gene76027.t1 | AT1G25290 | 28.125 | 192 | 122 | 4 | 173 | 361 | 132 | 310 | 2.16e-17 | 83.2 |
| MS.gene76027.t1 | AT1G25290 | 27.638 | 199 | 121 | 5 | 173 | 361 | 132 | 317 | 6.72e-16 | 79.0 |
| MS.gene76027.t1 | AT1G12750 | 28.743 | 167 | 109 | 3 | 216 | 381 | 96 | 253 | 6.30e-12 | 66.6 |
| MS.gene76027.t1 | AT1G12750 | 28.743 | 167 | 109 | 3 | 216 | 381 | 96 | 253 | 6.30e-12 | 66.6 |
| MS.gene76027.t1 | AT1G12750 | 28.743 | 167 | 109 | 3 | 216 | 381 | 96 | 253 | 6.30e-12 | 66.6 |
| MS.gene76027.t1 | AT1G12750 | 28.743 | 167 | 109 | 3 | 216 | 381 | 96 | 253 | 6.30e-12 | 66.6 |
| MS.gene76027.t1 | AT1G12750 | 28.743 | 167 | 109 | 3 | 216 | 381 | 96 | 253 | 6.30e-12 | 66.6 |
| MS.gene76027.t1 | AT1G63120 | 31.655 | 139 | 82 | 3 | 218 | 350 | 111 | 242 | 9.13e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATCATTGGATTCTTATTT+TGG | 0.095829 | 6.3:-13884713 | MS.gene76027:CDS |
| TACATACTTGGTGGAGTTTC+TGG | 0.113845 | 6.3:-13882967 | MS.gene76027:CDS |
| CTTATATTCACATAAGTATT+TGG | 0.167317 | 6.3:+13884157 | None:intergenic |
| GCTTATAACACCAATGTTTC+TGG | 0.197615 | 6.3:-13883570 | MS.gene76027:intron |
| TCTAAGTTATCATTCCTTAT+AGG | 0.220572 | 6.3:+13883662 | None:intergenic |
| GGACCTGCATTTGCAATAAT+TGG | 0.239871 | 6.3:-13882526 | MS.gene76027:CDS |
| TGTTGGGCCCTTGTATCATT+TGG | 0.251678 | 6.3:-13883036 | MS.gene76027:CDS |
| ACTTAAAACAACGACGAATA+TGG | 0.256645 | 6.3:+13882089 | None:intergenic |
| AGTCCTTCTCCACCGGTTCC+TGG | 0.285788 | 6.3:+13882162 | None:intergenic |
| AAGAAAACATGTATAGTTCT+TGG | 0.290796 | 6.3:-13884815 | MS.gene76027:CDS |
| GTGAATATAAGAAGAATAAA+AGG | 0.316724 | 6.3:-13884145 | MS.gene76027:CDS |
| GTTGGGCCCTTGTATCATTT+GGG | 0.328782 | 6.3:-13883035 | MS.gene76027:CDS |
| TTGAAATAGCAAGTCCTATA+AGG | 0.329116 | 6.3:-13883676 | MS.gene76027:CDS |
| AAGACGCCACAAGAGATTCT+TGG | 0.355412 | 6.3:+13884260 | None:intergenic |
| TTCACATGGCTCTGAGTTGT+TGG | 0.358549 | 6.3:-13883053 | MS.gene76027:CDS |
| TATTTGGTGCAGTGGTATAT+TGG | 0.361271 | 6.3:-13883726 | MS.gene76027:intron |
| GCAATAATTATTACAGCTCT+TGG | 0.373294 | 6.3:-13882430 | MS.gene76027:CDS |
| GGAGGTAAACTTTCATCCTT+AGG | 0.373631 | 6.3:+13884226 | None:intergenic |
| TATCTTGGCAAACTAAATAA+TGG | 0.383765 | 6.3:-13884575 | MS.gene76027:intron |
| CTCAAACTTGTTAGAAAATA+CGG | 0.390191 | 6.3:-13882141 | MS.gene76027:CDS |
| TCACATGGCTCTGAGTTGTT+GGG | 0.398292 | 6.3:-13883052 | MS.gene76027:CDS |
| AATTTGTTCTTTGAGTATCT+TGG | 0.402731 | 6.3:+13884188 | None:intergenic |
| AACTAGTTCGGCTCTTCAGC+TGG | 0.406212 | 6.3:-13882196 | MS.gene76027:CDS |
| ATATGGCTTTCTAACTAGTT+CGG | 0.422427 | 6.3:-13882208 | MS.gene76027:CDS |
| GCTTTCACGGGCATGGCATA+TGG | 0.423274 | 6.3:-13882225 | MS.gene76027:CDS |
| GAGTCTCTTGATGAGTATCT+TGG | 0.444739 | 6.3:-13884590 | MS.gene76027:CDS |
| CATTTGCAATAATTGGTGCT+TGG | 0.448850 | 6.3:-13882519 | MS.gene76027:CDS |
| ACACTCGGGAGCAGCTTTCA+CGG | 0.450958 | 6.3:-13882238 | MS.gene76027:CDS |
| CATACATACCACTCATCAAT+TGG | 0.455437 | 6.3:+13882385 | None:intergenic |
| ATTCAGATTGACCATTTCCT+TGG | 0.456951 | 6.3:+13884627 | None:intergenic |
| TGGTTGAGAATTTGTCTTGG+AGG | 0.466811 | 6.3:+13884208 | None:intergenic |
| TGAGAAGAAACTAAGATCAT+TGG | 0.467003 | 6.3:-13884726 | MS.gene76027:CDS |
| ATGACGGTGCACCAAGGAAA+TGG | 0.469388 | 6.3:-13884638 | MS.gene76027:CDS |
| GGTTTCATATTATGCAACCT+TGG | 0.469478 | 6.3:-13882409 | MS.gene76027:CDS |
| AGAAGAATAAAAGGTGTTAG+TGG | 0.470672 | 6.3:-13884136 | MS.gene76027:CDS |
| AAAGATAAACCATTTGATCA+TGG | 0.472368 | 6.3:-13883609 | MS.gene76027:CDS |
| ATTCTCCAACCATGATCAAA+TGG | 0.479448 | 6.3:+13883600 | None:intergenic |
| ATAAACCATTTGATCATGGT+TGG | 0.480102 | 6.3:-13883605 | MS.gene76027:CDS |
| TTCTTGATCTACATACTTGG+TGG | 0.485241 | 6.3:-13882976 | MS.gene76027:CDS |
| GACAAGACATCACCAGGAAC+CGG | 0.493358 | 6.3:-13882174 | MS.gene76027:CDS |
| CACTCGGGAGCAGCTTTCAC+GGG | 0.499207 | 6.3:-13882237 | MS.gene76027:CDS |
| CAATCTTGTACCAGAAACAT+TGG | 0.503254 | 6.3:+13883560 | None:intergenic |
| GGGAGCAGCTTTCACGGGCA+TGG | 0.506175 | 6.3:-13882232 | MS.gene76027:CDS |
| CCTCAAGTTTGCAAAGGCTA+TGG | 0.508897 | 6.3:-13883012 | MS.gene76027:CDS |
| CTTGAGGCCCAAATGATACA+AGG | 0.512714 | 6.3:+13883028 | None:intergenic |
| TGAAGTAGCTGTTGTAGCCT+TGG | 0.516069 | 6.3:-13882016 | MS.gene76027:CDS |
| AAGTTTGAGTCCTTCTCCAC+CGG | 0.525798 | 6.3:+13882155 | None:intergenic |
| ATCTTTGCTCCGTATAACAT+TGG | 0.531452 | 6.3:+13883626 | None:intergenic |
| GTGCCACCAACAGTTGGATC+TGG | 0.531981 | 6.3:+13882919 | None:intergenic |
| CAGCTGGACAAGACATCACC+AGG | 0.537373 | 6.3:-13882180 | MS.gene76027:CDS |
| TCTTGGTTGAGAATTTGTCT+TGG | 0.540290 | 6.3:+13884205 | None:intergenic |
| TCACCAGGAACCGGTGGAGA+AGG | 0.542931 | 6.3:-13882165 | MS.gene76027:CDS |
| ATTTGATCATGGTTGGAGAA+TGG | 0.543964 | 6.3:-13883598 | MS.gene76027:CDS |
| GCACCAATTATTGCAAATGC+AGG | 0.555521 | 6.3:+13882523 | None:intergenic |
| ATTCATTTGTAGGTCACACT+CGG | 0.558948 | 6.3:-13882253 | MS.gene76027:intron |
| TTCTGAGAATCTATTCAAGA+AGG | 0.575053 | 6.3:-13882452 | MS.gene76027:CDS |
| CTTACGGTGCCACCAACAGT+TGG | 0.578810 | 6.3:+13882913 | None:intergenic |
| ACACCAGATCCAACTGTTGG+TGG | 0.580925 | 6.3:-13882922 | MS.gene76027:CDS |
| CAGATGCCAATGCATTGAGA+GGG | 0.584447 | 6.3:+13882043 | None:intergenic |
| TTTGGGCCTCAAGTTTGCAA+AGG | 0.592340 | 6.3:-13883018 | MS.gene76027:CDS |
| CCATAGCCTTTGCAAACTTG+AGG | 0.593757 | 6.3:+13883012 | None:intergenic |
| TGTTTCTGATGCATCAAATG+AGG | 0.595588 | 6.3:-13884663 | MS.gene76027:CDS |
| TGCATCAAATGAGGCGATGA+CGG | 0.596045 | 6.3:-13884654 | MS.gene76027:CDS |
| ACAGATGCCAATGCATTGAG+AGG | 0.600042 | 6.3:+13882042 | None:intergenic |
| TCATGGTTGGAGAATGGTGG+AGG | 0.615589 | 6.3:-13883592 | MS.gene76027:CDS |
| TTCATTTGTAGGTCACACTC+GGG | 0.616886 | 6.3:-13882252 | MS.gene76027:intron |
| TCTTAGTTTCTTCTCAGCAG+AGG | 0.618686 | 6.3:+13884733 | None:intergenic |
| ATATTGGCATCAGTGAACAT+TGG | 0.618895 | 6.3:-13883710 | MS.gene76027:CDS |
| AAGACATCACCAGGAACCGG+TGG | 0.633375 | 6.3:-13882171 | MS.gene76027:CDS |
| CATACACCAGATCCAACTGT+TGG | 0.642520 | 6.3:-13882925 | MS.gene76027:CDS |
| AAGTATTGACATATACTCCA+AGG | 0.644028 | 6.3:+13881999 | None:intergenic |
| TGATCATGGTTGGAGAATGG+TGG | 0.656061 | 6.3:-13883595 | MS.gene76027:CDS |
| ACCTTGGTCCAATTGATGAG+TGG | 0.663630 | 6.3:-13882393 | MS.gene76027:intron |
| TTGAGGCCCAAATGATACAA+GGG | 0.665598 | 6.3:+13883029 | None:intergenic |
| GATGCCAATGCATTGAGAGG+GGG | 0.668617 | 6.3:+13882045 | None:intergenic |
| AGATGCCAATGCATTGAGAG+GGG | 0.670513 | 6.3:+13882044 | None:intergenic |
| GCATGCAGGAATATTTCACA+TGG | 0.672691 | 6.3:-13883067 | MS.gene76027:CDS |
| CATAAGCCAAGAATCTCTTG+TGG | 0.678019 | 6.3:-13884266 | MS.gene76027:CDS |
| ACCACTCATCAATTGGACCA+AGG | 0.692729 | 6.3:+13882392 | None:intergenic |
| GAGGCGATGACGGTGCACCA+AGG | 0.700000 | 6.3:-13884644 | MS.gene76027:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTACATATTTATCT+TGG | + | chr6.3:13882547-13882566 | None:intergenic | 10.0% |
| !! | AAAAATTATACCGAGAATAT+CGG | + | chr6.3:13882868-13882887 | None:intergenic | 20.0% |
| !! | AAATTCATGTTAGACAAAAT+AGG | + | chr6.3:13884294-13884313 | None:intergenic | 20.0% |
| !! | AAGTAAATTATTGCAGAATT+TGG | + | chr6.3:13884142-13884161 | None:intergenic | 20.0% |
| !! | AATTGAGTAAATAGGAAAAT+CGG | + | chr6.3:13883045-13883064 | None:intergenic | 20.0% |
| !! | ATCATTTAACTCTATATTTC+TGG | - | chr6.3:13883381-13883400 | MS.gene76027:intron | 20.0% |
| !! | CTTATATTCACATAAGTATT+TGG | + | chr6.3:13882690-13882709 | None:intergenic | 20.0% |
| !! | GTGAATATAAGAAGAATAAA+AGG | - | chr6.3:13882699-13882718 | MS.gene76027:intron | 20.0% |
| !! | TAGTTTCATGTATATATATG+TGG | + | chr6.3:13883333-13883352 | None:intergenic | 20.0% |
| !! | TTGCAAATATACAAAATTCA+TGG | - | chr6.3:13882988-13883007 | MS.gene76027:CDS | 20.0% |
| !!! | AAATTTTTGATTACTTCGAA+GGG | + | chr6.3:13884202-13884221 | None:intergenic | 20.0% |
| !!! | ATACTCAAAGAACAAATTTT+AGG | - | chr6.3:13882661-13882680 | MS.gene76027:intron | 20.0% |
| !!! | ATGTAAATTTTTTTGTATGC+AGG | - | chr6.3:13882555-13882574 | MS.gene76027:intron | 20.0% |
| !!! | TAAATTTTTGATTACTTCGA+AGG | + | chr6.3:13884203-13884222 | None:intergenic | 20.0% |
| !!! | TAACATCTCTATTTTGAATT+TGG | + | chr6.3:13884359-13884378 | None:intergenic | 20.0% |
| !!! | TGGTAGATTTTTAAAACAAT+TGG | + | chr6.3:13883475-13883494 | None:intergenic | 20.0% |
| !!! | TTTAACTGCATATTTTTACT+AGG | + | chr6.3:13883994-13884013 | None:intergenic | 20.0% |
| ! | AAAGATAAACCATTTGATCA+TGG | - | chr6.3:13883235-13883254 | MS.gene76027:intron | 25.0% |
| ! | AACAAAACTAGAAATCAAAC+CGG | + | chr6.3:13883694-13883713 | None:intergenic | 25.0% |
| ! | AACCAAGATTAATAACTTTG+TGG | - | chr6.3:13884113-13884132 | MS.gene76027:CDS | 25.0% |
| ! | AAGAAAACATGTATAGTTCT+TGG | - | chr6.3:13882029-13882048 | MS.gene76027:CDS | 25.0% |
| ! | AATTTCTACAACAATTTCGA+TGG | + | chr6.3:13882422-13882441 | None:intergenic | 25.0% |
| ! | ACCAAATATAACAACATAGA+TGG | + | chr6.3:13883106-13883125 | None:intergenic | 25.0% |
| ! | GTAACATTTATAGAGTGAAT+AGG | - | chr6.3:13882891-13882910 | MS.gene76027:intron | 25.0% |
| ! | GTCTTATGTTAAAAATCCTA+AGG | - | chr6.3:13882602-13882621 | MS.gene76027:intron | 25.0% |
| ! | TATAGAGTGAATAGGTAAAT+TGG | - | chr6.3:13882899-13882918 | MS.gene76027:intron | 25.0% |
| ! | TATATTTATGGTTTCTCAGA+TGG | + | chr6.3:13883437-13883456 | None:intergenic | 25.0% |
| ! | TATCTTGGCAAACTAAATAA+TGG | - | chr6.3:13882269-13882288 | MS.gene76027:intron | 25.0% |
| ! | TCATGTATATATATGTGGAA+TGG | + | chr6.3:13883328-13883347 | None:intergenic | 25.0% |
| ! | TCCATCTATGTTGTTATATT+TGG | - | chr6.3:13883102-13883121 | MS.gene76027:intron | 25.0% |
| ! | TCTAAGTTATCATTCCTTAT+AGG | + | chr6.3:13883185-13883204 | None:intergenic | 25.0% |
| ! | TGATAGACAATTGAGTAAAT+AGG | + | chr6.3:13883053-13883072 | None:intergenic | 25.0% |
| ! | TTCCACAAAGTTATTAATCT+TGG | + | chr6.3:13884118-13884137 | None:intergenic | 25.0% |
| ! | TTTCAATTCGATGAACATTT+CGG | + | chr6.3:13884548-13884567 | None:intergenic | 25.0% |
| !! | AATTTGTTCTTTGAGTATCT+TGG | + | chr6.3:13882659-13882678 | None:intergenic | 25.0% |
| !! | ACTATACATGTTTTCTTGTA+AGG | + | chr6.3:13882026-13882045 | None:intergenic | 25.0% |
| !! | ATTATTGGTGATTCATTTGT+AGG | - | chr6.3:13884581-13884600 | MS.gene76027:CDS | 25.0% |
| !! | TTGTCTAACATGAATTTTCA+GGG | - | chr6.3:13884297-13884316 | MS.gene76027:intron | 25.0% |
| !! | TTTGTCTAACATGAATTTTC+AGG | - | chr6.3:13884296-13884315 | MS.gene76027:intron | 25.0% |
| !! | TTTTCAAACTATACTCTTGT+TGG | - | chr6.3:13882826-13882845 | MS.gene76027:intron | 25.0% |
| !! | TTTTCACTTCCAATGTTATA+CGG | - | chr6.3:13883209-13883228 | MS.gene76027:intron | 25.0% |
| !! | TTTTTCTTGATCTACATACT+TGG | - | chr6.3:13883865-13883884 | MS.gene76027:intron | 25.0% |
| !!! | AGATCATTGGATTCTTATTT+TGG | - | chr6.3:13882131-13882150 | MS.gene76027:CDS | 25.0% |
| !!! | CTCAAACTTGTTAGAAAATA+CGG | - | chr6.3:13884703-13884722 | MS.gene76027:CDS | 25.0% |
| !!! | GAATTTTAGAGTGATACTTA+CGG | + | chr6.3:13883950-13883969 | None:intergenic | 25.0% |
| AACCATAAATATAGTGCATC+AGG | - | chr6.3:13883444-13883463 | MS.gene76027:intron | 30.0% | |
| ACTTAAAACAACGACGAATA+TGG | + | chr6.3:13884758-13884777 | None:intergenic | 30.0% | |
| ATAAACCATTTGATCATGGT+TGG | - | chr6.3:13883239-13883258 | MS.gene76027:intron | 30.0% | |
| ATATGGCTTTCTAACTAGTT+CGG | - | chr6.3:13884636-13884655 | MS.gene76027:CDS | 30.0% | |
| CTGGTACAAGATTGAAAATT+GGG | - | chr6.3:13883293-13883312 | MS.gene76027:intron | 30.0% | |
| GCAAATAACGCTTAAAATCA+TGG | - | chr6.3:13882341-13882360 | MS.gene76027:intron | 30.0% | |
| GCAATAATTATTACAGCTCT+TGG | - | chr6.3:13884414-13884433 | MS.gene76027:intron | 30.0% | |
| GGATATTTACGTTTAGTGTA+TGG | - | chr6.3:13882362-13882381 | MS.gene76027:intron | 30.0% | |
| GGTAAAGTGTAATTACTTCT+TGG | - | chr6.3:13882290-13882309 | MS.gene76027:intron | 30.0% | |
| TCTGGTACAAGATTGAAAAT+TGG | - | chr6.3:13883292-13883311 | MS.gene76027:intron | 30.0% | |
| TGAATTATTTGCTTAACGCA+TGG | - | chr6.3:13882519-13882538 | MS.gene76027:CDS | 30.0% | |
| TGAGAAGAAACTAAGATCAT+TGG | - | chr6.3:13882118-13882137 | MS.gene76027:CDS | 30.0% | |
| TTATCCAAATGTTGTGTAAC+TGG | - | chr6.3:13884232-13884251 | MS.gene76027:CDS | 30.0% | |
| TTGAAATAGCAAGTCCTATA+AGG | - | chr6.3:13883168-13883187 | MS.gene76027:intron | 30.0% | |
| ! | AAGTTCATTCCTTTTGCTTA+TGG | - | chr6.3:13884774-13884793 | MS.gene76027:CDS | 30.0% |
| ! | TGATTTTAAGCGTTATTTGC+AGG | + | chr6.3:13882341-13882360 | None:intergenic | 30.0% |
| ! | TTCTGAGAATCTATTCAAGA+AGG | - | chr6.3:13884392-13884411 | MS.gene76027:intron | 30.0% |
| !! | AAGTATTGACATATACTCCA+AGG | + | chr6.3:13884848-13884867 | None:intergenic | 30.0% |
| !! | AGAAGAATAAAAGGTGTTAG+TGG | - | chr6.3:13882708-13882727 | MS.gene76027:intron | 30.0% |
| !! | GATGGTTGATGAATATAACA+AGG | + | chr6.3:13882404-13882423 | None:intergenic | 30.0% |
| AGTTCCAGTTACACAACATT+TGG | + | chr6.3:13884239-13884258 | None:intergenic | 35.0% | |
| ATATTGGCATCAGTGAACAT+TGG | - | chr6.3:13883134-13883153 | MS.gene76027:intron | 35.0% | |
| ATCTTTGCTCCGTATAACAT+TGG | + | chr6.3:13883221-13883240 | None:intergenic | 35.0% | |
| ATTCAGATTGACCATTTCCT+TGG | + | chr6.3:13882220-13882239 | None:intergenic | 35.0% | |
| ATTCATTTGTAGGTCACACT+CGG | - | chr6.3:13884591-13884610 | MS.gene76027:CDS | 35.0% | |
| ATTCTCCAACCATGATCAAA+TGG | + | chr6.3:13883247-13883266 | None:intergenic | 35.0% | |
| ATTTGATCATGGTTGGAGAA+TGG | - | chr6.3:13883246-13883265 | MS.gene76027:intron | 35.0% | |
| CAATCTTGTACCAGAAACAT+TGG | + | chr6.3:13883287-13883306 | None:intergenic | 35.0% | |
| CAATTGATGAGTGGTATGTA+TGG | - | chr6.3:13884460-13884479 | MS.gene76027:intron | 35.0% | |
| CACCTGATGCACTATATTTA+TGG | + | chr6.3:13883449-13883468 | None:intergenic | 35.0% | |
| CATACATACCACTCATCAAT+TGG | + | chr6.3:13884462-13884481 | None:intergenic | 35.0% | |
| CATCGCTAAAAATGTAGTGT+CGG | + | chr6.3:13882965-13882984 | None:intergenic | 35.0% | |
| GACATATGCATACAATTTCG+AGG | - | chr6.3:13883018-13883037 | MS.gene76027:CDS | 35.0% | |
| GATCGATGCTTACAATTTCT+AGG | + | chr6.3:13882926-13882945 | None:intergenic | 35.0% | |
| GCTTATAACACCAATGTTTC+TGG | - | chr6.3:13883274-13883293 | MS.gene76027:intron | 35.0% | |
| GGTTTCATATTATGCAACCT+TGG | - | chr6.3:13884435-13884454 | MS.gene76027:intron | 35.0% | |
| TCTTGGTTGAGAATTTGTCT+TGG | + | chr6.3:13882642-13882661 | None:intergenic | 35.0% | |
| TGAGACTTTCGTGTGTTTAA+TGG | + | chr6.3:13883671-13883690 | None:intergenic | 35.0% | |
| TTAAAAATCTACCAACCGAC+CGG | - | chr6.3:13883481-13883500 | MS.gene76027:intron | 35.0% | |
| TTCTTGATCTACATACTTGG+TGG | - | chr6.3:13883868-13883887 | MS.gene76027:intron | 35.0% | |
| ! | ATTTTTCATATGCAGCATGC+AGG | - | chr6.3:13883763-13883782 | MS.gene76027:intron | 35.0% |
| ! | CATTTGCAATAATTGGTGCT+TGG | - | chr6.3:13884325-13884344 | MS.gene76027:intron | 35.0% |
| ! | CGTGTGTTTAATGGTTCTAT+CGG | + | chr6.3:13883662-13883681 | None:intergenic | 35.0% |
| ! | TGTTTCTGATGCATCAAATG+AGG | - | chr6.3:13882181-13882200 | MS.gene76027:CDS | 35.0% |
| !! | TAAGCATCGATCAAAGATGT+CGG | - | chr6.3:13882934-13882953 | MS.gene76027:CDS | 35.0% |
| !! | TATTTGGTGCAGTGGTATAT+TGG | - | chr6.3:13883118-13883137 | MS.gene76027:intron | 35.0% |
| !! | TGTTGTTATATTTGGTGCAG+TGG | - | chr6.3:13883110-13883129 | MS.gene76027:intron | 35.0% |
| AACTATACTCTTGTTGGCAG+TGG | - | chr6.3:13882832-13882851 | MS.gene76027:intron | 40.0% | |
| AATCGATTGAACCAAGAACC+AGG | - | chr6.3:13883507-13883526 | MS.gene76027:intron | 40.0% | |
| CATAAGCCAAGAATCTCTTG+TGG | - | chr6.3:13882578-13882597 | MS.gene76027:intron | 40.0% | |
| CTAGTCACTAGTCATCATCT+AGG | - | chr6.3:13883350-13883369 | MS.gene76027:intron | 40.0% | |
| CTTGGTTCAATCGATTGAAC+CGG | + | chr6.3:13883503-13883522 | None:intergenic | 40.0% | |
| GAGTCTCTTGATGAGTATCT+TGG | - | chr6.3:13882254-13882273 | MS.gene76027:intron | 40.0% | |
| GCACCAATTATTGCAAATGC+AGG | + | chr6.3:13884324-13884343 | None:intergenic | 40.0% | |
| GCATGCAGGAATATTTCACA+TGG | - | chr6.3:13883777-13883796 | MS.gene76027:intron | 40.0% | |
| GGACCTGCATTTGCAATAAT+TGG | - | chr6.3:13884318-13884337 | MS.gene76027:intron | 40.0% | |
| GGAGGTAAACTTTCATCCTT+AGG | + | chr6.3:13882621-13882640 | None:intergenic | 40.0% | |
| TAAACACACGAAAGTCTCAC+CGG | - | chr6.3:13883672-13883691 | MS.gene76027:CDS | 40.0% | |
| TCTTAGTTTCTTCTCAGCAG+AGG | + | chr6.3:13882114-13882133 | None:intergenic | 40.0% | |
| TGGTTGAGAATTTGTCTTGG+AGG | + | chr6.3:13882639-13882658 | None:intergenic | 40.0% | |
| TTCATTTGTAGGTCACACTC+GGG | - | chr6.3:13884592-13884611 | MS.gene76027:CDS | 40.0% | |
| TTGAGGCCCAAATGATACAA+GGG | + | chr6.3:13883818-13883837 | None:intergenic | 40.0% | |
| ! | TACATACTTGGTGGAGTTTC+TGG | - | chr6.3:13883877-13883896 | MS.gene76027:intron | 40.0% |
| AAGACGCCACAAGAGATTCT+TGG | + | chr6.3:13882587-13882606 | None:intergenic | 45.0% | |
| AAGTTTGAGTCCTTCTCCAC+CGG | + | chr6.3:13884692-13884711 | None:intergenic | 45.0% | |
| ACAGATGCCAATGCATTGAG+AGG | + | chr6.3:13884805-13884824 | None:intergenic | 45.0% | |
| ACCACTCATCAATTGGACCA+AGG | + | chr6.3:13884455-13884474 | None:intergenic | 45.0% | |
| ACCTTGGTCCAATTGATGAG+TGG | - | chr6.3:13884451-13884470 | MS.gene76027:intron | 45.0% | |
| AGATGCCAATGCATTGAGAG+GGG | + | chr6.3:13884803-13884822 | None:intergenic | 45.0% | |
| CAGATGCCAATGCATTGAGA+GGG | + | chr6.3:13884804-13884823 | None:intergenic | 45.0% | |
| CATACACCAGATCCAACTGT+TGG | - | chr6.3:13883919-13883938 | MS.gene76027:intron | 45.0% | |
| CCATAGCCTTTGCAAACTTG+AGG | + | chr6.3:13883835-13883854 | None:intergenic | 45.0% | |
| CCTCAAGTTTGCAAAGGCTA+TGG | - | chr6.3:13883832-13883851 | MS.gene76027:intron | 45.0% | |
| CTTGAGGCCCAAATGATACA+AGG | + | chr6.3:13883819-13883838 | None:intergenic | 45.0% | |
| GCTAGTCGATCTCAAAACGA+CGG | + | chr6.3:13884035-13884054 | None:intergenic | 45.0% | |
| GTTCAATCGATTGAACCGGT+CGG | + | chr6.3:13883499-13883518 | None:intergenic | 45.0% | |
| GTTGGGCCCTTGTATCATTT+GGG | - | chr6.3:13883809-13883828 | MS.gene76027:intron | 45.0% | |
| TATACTCTTGTTGGCAGTGG+CGG | - | chr6.3:13882835-13882854 | MS.gene76027:intron | 45.0% | |
| TGAAGTAGCTGTTGTAGCCT+TGG | - | chr6.3:13884828-13884847 | MS.gene76027:CDS | 45.0% | |
| TGATCATGGTTGGAGAATGG+TGG | - | chr6.3:13883249-13883268 | MS.gene76027:intron | 45.0% | |
| TGCATCAAATGAGGCGATGA+CGG | - | chr6.3:13882190-13882209 | MS.gene76027:CDS | 45.0% | |
| TGTTGGGCCCTTGTATCATT+TGG | - | chr6.3:13883808-13883827 | MS.gene76027:intron | 45.0% | |
| TTTGGGCCTCAAGTTTGCAA+AGG | - | chr6.3:13883826-13883845 | MS.gene76027:intron | 45.0% | |
| ! | GTTTCATGCCGGTTACATTG+TGG | - | chr6.3:13883544-13883563 | MS.gene76027:intron | 45.0% |
| !! | TCACATGGCTCTGAGTTGTT+GGG | - | chr6.3:13883792-13883811 | MS.gene76027:intron | 45.0% |
| !! | TTCACATGGCTCTGAGTTGT+TGG | - | chr6.3:13883791-13883810 | MS.gene76027:intron | 45.0% |
| !! | AAAATGTAAATATTTATTAT+TGG | - | chr6.3:13884566-13884585 | MS.gene76027:intron | 5.0% |
| !! | AGTAAATATTATTTAAAAAT+TGG | + | chr6.3:13884075-13884094 | None:intergenic | 5.0% |
| AACTAGTTCGGCTCTTCAGC+TGG | - | chr6.3:13884648-13884667 | MS.gene76027:CDS | 50.0% | |
| AATCGATTGAACCGGTCGGT+TGG | + | chr6.3:13883495-13883514 | None:intergenic | 50.0% | |
| ACACCAGATCCAACTGTTGG+TGG | - | chr6.3:13883922-13883941 | MS.gene76027:intron | 50.0% | |
| ATGACGGTGCACCAAGGAAA+TGG | - | chr6.3:13882206-13882225 | MS.gene76027:CDS | 50.0% | |
| CAACCCGACCACAATGTAAC+CGG | + | chr6.3:13883555-13883574 | None:intergenic | 50.0% | |
| CGGAGCATGACCGATATTCT+CGG | - | chr6.3:13882855-13882874 | MS.gene76027:intron | 50.0% | |
| GACAAGACATCACCAGGAAC+CGG | - | chr6.3:13884670-13884689 | MS.gene76027:CDS | 50.0% | |
| GAGGGGGATCCATAAGCAAA+AGG | + | chr6.3:13884786-13884805 | None:intergenic | 50.0% | |
| GATGCCAATGCATTGAGAGG+GGG | + | chr6.3:13884802-13884821 | None:intergenic | 50.0% | |
| GCATGAAACCATCCGACCAA+TGG | + | chr6.3:13883533-13883552 | None:intergenic | 50.0% | |
| TCATGGTTGGAGAATGGTGG+AGG | - | chr6.3:13883252-13883271 | MS.gene76027:intron | 50.0% | |
| TGAACCAAGAACCAGGCCAT+TGG | - | chr6.3:13883514-13883533 | MS.gene76027:intron | 50.0% | |
| TTGGTCGGATGGTTTCATGC+CGG | - | chr6.3:13883533-13883552 | MS.gene76027:intron | 50.0% | |
| ! | ATGCCGGTTACATTGTGGTC+GGG | - | chr6.3:13883549-13883568 | MS.gene76027:intron | 50.0% |
| ! | CATGCCGGTTACATTGTGGT+CGG | - | chr6.3:13883548-13883567 | MS.gene76027:intron | 50.0% |
| AAACCATCCGACCAATGGCC+TGG | + | chr6.3:13883528-13883547 | None:intergenic | 55.0% | |
| AAGACATCACCAGGAACCGG+TGG | - | chr6.3:13884673-13884692 | MS.gene76027:CDS | 55.0% | |
| ACACTCGGGAGCAGCTTTCA+CGG | - | chr6.3:13884606-13884625 | MS.gene76027:CDS | 55.0% | |
| CAGCTGGACAAGACATCACC+AGG | - | chr6.3:13884664-13884683 | MS.gene76027:CDS | 55.0% | |
| CCAAGAACCAGGCCATTGGT+CGG | - | chr6.3:13883518-13883537 | MS.gene76027:intron | 55.0% | |
| GCTTTCACGGGCATGGCATA+TGG | - | chr6.3:13884619-13884638 | MS.gene76027:CDS | 55.0% | |
| GGATCCCCCTCTCAATGCAT+TGG | - | chr6.3:13884795-13884814 | MS.gene76027:CDS | 55.0% | |
| GGGTTGAACTAGCGTTAGGC+GGG | - | chr6.3:13883569-13883588 | MS.gene76027:intron | 55.0% | |
| GGTTGAACTAGCGTTAGGCG+GGG | - | chr6.3:13883570-13883589 | MS.gene76027:intron | 55.0% | |
| GTGCCACCAACAGTTGGATC+TGG | + | chr6.3:13883928-13883947 | None:intergenic | 55.0% | |
| ! | CGGGTTGAACTAGCGTTAGG+CGG | - | chr6.3:13883568-13883587 | MS.gene76027:intron | 55.0% |
| !! | CTTACGGTGCCACCAACAGT+TGG | + | chr6.3:13883934-13883953 | None:intergenic | 55.0% |
| !! | GGTCGGGTTGAACTAGCGTT+AGG | - | chr6.3:13883565-13883584 | MS.gene76027:intron | 55.0% |
| CACTCGGGAGCAGCTTTCAC+GGG | - | chr6.3:13884607-13884626 | MS.gene76027:CDS | 60.0% | |
| GAACCAGGCCATTGGTCGGA+TGG | - | chr6.3:13883522-13883541 | MS.gene76027:intron | 60.0% | |
| TCACCAGGAACCGGTGGAGA+AGG | - | chr6.3:13884679-13884698 | MS.gene76027:CDS | 60.0% | |
| ! | CCGACCAATGGCCTGGTTCT+TGG | + | chr6.3:13883521-13883540 | None:intergenic | 60.0% |
| !! | AGTCCTTCTCCACCGGTTCC+TGG | + | chr6.3:13884685-13884704 | None:intergenic | 60.0% |
| GGGAGCAGCTTTCACGGGCA+TGG | - | chr6.3:13884612-13884631 | MS.gene76027:CDS | 65.0% | |
| ! | GAGGCGATGACGGTGCACCA+AGG | - | chr6.3:13882200-13882219 | MS.gene76027:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 13881993 | 13884873 | 13881993 | ID=MS.gene76027 |
| chr6.3 | mRNA | 13881993 | 13884873 | 13881993 | ID=MS.gene76027.t1;Parent=MS.gene76027 |
| chr6.3 | exon | 13884576 | 13884873 | 13884576 | ID=MS.gene76027.t1.exon1;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13884576 | 13884873 | 13884576 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| chr6.3 | exon | 13884076 | 13884289 | 13884076 | ID=MS.gene76027.t1.exon2;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13884076 | 13884289 | 13884076 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| chr6.3 | exon | 13883571 | 13883736 | 13883571 | ID=MS.gene76027.t1.exon3;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13883571 | 13883736 | 13883571 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| chr6.3 | exon | 13882918 | 13883088 | 13882918 | ID=MS.gene76027.t1.exon4;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13882918 | 13883088 | 13882918 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| chr6.3 | exon | 13882394 | 13882548 | 13882394 | ID=MS.gene76027.t1.exon5;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13882394 | 13882548 | 13882394 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| chr6.3 | exon | 13881993 | 13882263 | 13881993 | ID=MS.gene76027.t1.exon6;Parent=MS.gene76027.t1 |
| chr6.3 | CDS | 13881993 | 13882263 | 13881993 | ID=cds.MS.gene76027.t1;Parent=MS.gene76027.t1 |
| Gene Sequence |
| Protein sequence |
