Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30202.t1 | XP_013451290.2 | 94.8 | 289 | 7 | 2 | 1 | 282 | 1 | 288 | 3.50E-148 | 534.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30202.t1 | Q55403 | 37.6 | 186 | 106 | 4 | 89 | 272 | 2 | 179 | 2.3e-23 | 110.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30202.t1 | A0A396HF23 | 94.8 | 289 | 7 | 2 | 1 | 282 | 1 | 288 | 2.5e-148 | 534.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene30202 | 0.855689 | 5.33E-62 | -1.69E-46 |
| MS.gene049171 | MS.gene30202 | 0.8804 | 5.66E-70 | -1.69E-46 |
| MS.gene049173 | MS.gene30202 | 0.811788 | 5.88E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene30202 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene30202 | 0.859104 | 5.21E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene30202 | 0.863392 | 2.57E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene30202 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene04932 | MS.gene30202 | -0.81667 | 4.91E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene30202 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene30202 | 0.813369 | 2.65E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene30202 | 0.815755 | 7.86E-52 | -1.69E-46 |
| MS.gene049488 | MS.gene30202 | 0.807448 | 5.03E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene30202 | 0.891725 | 3.06E-74 | -1.69E-46 |
| MS.gene049633 | MS.gene30202 | 0.858288 | 9.13E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene30202 | 0.890093 | 1.35E-73 | -1.69E-46 |
| MS.gene05010 | MS.gene30202 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene30202 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene30202 | 0.8645 | 1.16E-64 | -1.69E-46 |
| MS.gene050323 | MS.gene30202 | 0.848607 | 5.50E-60 | -1.69E-46 |
| MS.gene050338 | MS.gene30202 | -0.806411 | 8.34E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene30202 | 0.835638 | 1.49E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene30202 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene30202 | 0.830194 | 3.37E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene30202 | 0.814136 | 1.80E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene30202 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene30202 | 0.858098 | 1.04E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene30202 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene050625 | MS.gene30202 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene30202 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene30202 | 0.821916 | 3.13E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene30202 | 0.878596 | 2.47E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene30202 | 0.887808 | 1.03E-72 | -1.69E-46 |
| MS.gene05080 | MS.gene30202 | 0.828344 | 9.47E-55 | -1.69E-46 |
| MS.gene05081 | MS.gene30202 | 0.88498 | 1.21E-71 | -1.69E-46 |
| MS.gene050868 | MS.gene30202 | 0.85929 | 4.58E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene30202 | 0.858618 | 7.28E-63 | -1.69E-46 |
| MS.gene050950 | MS.gene30202 | 0.875847 | 2.23E-68 | -1.69E-46 |
| MS.gene05105 | MS.gene30202 | 0.833404 | 5.44E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene30202 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene30202 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene051438 | MS.gene30202 | 0.827898 | 1.21E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene30202 | 0.806142 | 9.50E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene30202 | 0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene051552 | MS.gene30202 | -0.823551 | 1.30E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene30202 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene30202 | 0.868126 | 8.23E-66 | -1.69E-46 |
| MS.gene051692 | MS.gene30202 | 0.832799 | 7.69E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene30202 | 0.804043 | 2.61E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene30202 | 0.814519 | 1.48E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene30202 | 0.904228 | 1.53E-79 | -1.69E-46 |
| MS.gene051858 | MS.gene30202 | 0.841861 | 3.68E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene30202 | 0.821691 | 3.53E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene30202 | 0.812809 | 3.52E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene30202 | 0.826581 | 2.51E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene30202 | 0.819732 | 9.95E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene30202 | 0.824717 | 6.94E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene30202 | 0.844461 | 7.45E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene30202 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene30202 | -0.810162 | 1.32E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene30202 | 0.835639 | 1.49E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene30202 | 0.866999 | 1.89E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene30202 | 0.843994 | 9.95E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene30202 | 0.822968 | 1.78E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene30202 | 0.886265 | 3.98E-72 | -1.69E-46 |
| MS.gene052503 | MS.gene30202 | 0.891822 | 2.80E-74 | -1.69E-46 |
| MS.gene052505 | MS.gene30202 | 0.871134 | 8.61E-67 | -1.69E-46 |
| MS.gene052506 | MS.gene30202 | 0.844632 | 6.70E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene30202 | 0.884394 | 1.99E-71 | -1.69E-46 |
| MS.gene052820 | MS.gene30202 | 0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene30202 | 0.852598 | 4.15E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene30202 | 0.88731 | 1.60E-72 | -1.69E-46 |
| MS.gene052825 | MS.gene30202 | 0.886393 | 3.56E-72 | -1.69E-46 |
| MS.gene052870 | MS.gene30202 | 0.882651 | 8.72E-71 | -1.69E-46 |
| MS.gene052872 | MS.gene30202 | 0.887105 | 1.91E-72 | -1.69E-46 |
| MS.gene052966 | MS.gene30202 | 0.835831 | 1.33E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene30202 | 0.833837 | 4.24E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene30202 | 0.8503 | 1.86E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene30202 | 0.835594 | 1.53E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene30202 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene30202 | 0.838511 | 2.75E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene30202 | 0.862587 | 4.56E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene30202 | 0.855588 | 5.71E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene30202 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene30202 | 0.833688 | 4.62E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene30202 | 0.862362 | 5.35E-64 | -1.69E-46 |
| MS.gene053479 | MS.gene30202 | 0.885179 | 1.02E-71 | -1.69E-46 |
| MS.gene053480 | MS.gene30202 | 0.867403 | 1.40E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene30202 | 0.868119 | 8.27E-66 | -1.69E-46 |
| MS.gene053579 | MS.gene30202 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene30202 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene30202 | 0.842416 | 2.62E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene30202 | 0.909919 | 3.34E-82 | -1.69E-46 |
| MS.gene053912 | MS.gene30202 | 0.840927 | 6.48E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene30202 | 0.852799 | 3.64E-61 | -1.69E-46 |
| MS.gene054107 | MS.gene30202 | 0.834626 | 2.69E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene30202 | 0.886323 | 3.78E-72 | -1.69E-46 |
| MS.gene054595 | MS.gene30202 | 0.837451 | 5.16E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene30202 | 0.853092 | 3.00E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene30202 | 0.852122 | 5.68E-61 | -1.69E-46 |
| MS.gene054706 | MS.gene30202 | -0.828497 | 8.70E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene30202 | 0.853066 | 3.06E-61 | -1.69E-46 |
| MS.gene054742 | MS.gene30202 | -0.812572 | 3.96E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene30202 | -0.841175 | 5.57E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene30202 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene30202 | 0.857788 | 1.29E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene30202 | 0.838513 | 2.75E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene30202 | 0.870479 | 1.41E-66 | -1.69E-46 |
| MS.gene055206 | MS.gene30202 | 0.867708 | 1.12E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene30202 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene30202 | 0.879109 | 1.63E-69 | -1.69E-46 |
| MS.gene055289 | MS.gene30202 | 0.872741 | 2.52E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene30202 | 0.849516 | 3.08E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene30202 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene30202 | 0.86509 | 7.60E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene30202 | 0.853158 | 2.87E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene30202 | 0.852175 | 5.48E-61 | -1.69E-46 |
| MS.gene055741 | MS.gene30202 | 0.839167 | 1.86E-57 | -1.69E-46 |
| MS.gene055744 | MS.gene30202 | 0.836538 | 8.82E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene30202 | 0.833752 | 4.45E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene30202 | 0.81976 | 9.81E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene30202 | 0.822729 | 2.03E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene30202 | 0.873703 | 1.20E-67 | -1.69E-46 |
| MS.gene055909 | MS.gene30202 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene30202 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene30202 | 0.828594 | 8.24E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene30202 | 0.865558 | 5.41E-65 | -1.69E-46 |
| MS.gene056083 | MS.gene30202 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene30202 | 0.840896 | 6.60E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene30202 | 0.836598 | 8.52E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene30202 | 0.860644 | 1.79E-63 | -1.69E-46 |
| MS.gene056446 | MS.gene30202 | 0.806391 | 8.42E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene30202 | 0.816501 | 5.35E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene30202 | 0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene30202 | 0.86345 | 2.47E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene30202 | 0.822959 | 1.79E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene30202 | 0.843488 | 1.36E-58 | -1.69E-46 |
| MS.gene056590 | MS.gene30202 | -0.815644 | 8.32E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene30202 | -0.816189 | 6.29E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene30202 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene30202 | 0.844593 | 6.87E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene30202 | 0.807408 | 5.13E-50 | -1.69E-46 |
| MS.gene056688 | MS.gene30202 | -0.805744 | 1.15E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene30202 | 0.827675 | 1.37E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene30202 | -0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene30202 | -0.831786 | 1.37E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene30202 | 0.823104 | 1.66E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene30202 | 0.848594 | 5.55E-60 | -1.69E-46 |
| MS.gene056898 | MS.gene30202 | 0.816607 | 5.07E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene30202 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene057019 | MS.gene30202 | 0.811238 | 7.74E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene30202 | 0.82576 | 3.93E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene30202 | 0.864135 | 1.51E-64 | -1.69E-46 |
| MS.gene057086 | MS.gene30202 | 0.848617 | 5.47E-60 | -1.69E-46 |
| MS.gene057124 | MS.gene30202 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene30202 | 0.800156 | 1.64E-48 | -1.69E-46 |
| MS.gene057196 | MS.gene30202 | 0.815863 | 7.43E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene30202 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene30202 | 0.829205 | 5.86E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene30202 | 0.87141 | 6.98E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene30202 | 0.869847 | 2.28E-66 | -1.69E-46 |
| MS.gene057734 | MS.gene30202 | 0.839764 | 1.30E-57 | -1.69E-46 |
| MS.gene057805 | MS.gene30202 | 0.801257 | 9.81E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene30202 | 0.825977 | 3.49E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene30202 | 0.881716 | 1.90E-70 | -1.69E-46 |
| MS.gene057857 | MS.gene30202 | 0.845591 | 3.69E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene30202 | 0.812725 | 3.67E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene30202 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene30202 | 0.827273 | 1.71E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene30202 | 0.821331 | 4.27E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene30202 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene30202 | 0.837864 | 4.04E-57 | -1.69E-46 |
| MS.gene058157 | MS.gene30202 | 0.80811 | 3.64E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene30202 | -0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene30202 | 0.853187 | 2.82E-61 | -1.69E-46 |
| MS.gene058376 | MS.gene30202 | 0.870326 | 1.59E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene30202 | 0.856086 | 4.08E-62 | -1.69E-46 |
| MS.gene058418 | MS.gene30202 | -0.828853 | 7.14E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene30202 | 0.873071 | 1.95E-67 | -1.69E-46 |
| MS.gene058444 | MS.gene30202 | 0.859824 | 3.17E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene30202 | 0.879704 | 1.00E-69 | -1.69E-46 |
| MS.gene058700 | MS.gene30202 | 0.817609 | 3.02E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene30202 | 0.814409 | 1.56E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene30202 | 0.838648 | 2.54E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene30202 | 0.9117 | 4.52E-83 | -1.69E-46 |
| MS.gene05883 | MS.gene30202 | 0.80754 | 4.81E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene30202 | 0.841345 | 5.03E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene30202 | 0.896978 | 2.19E-76 | -1.69E-46 |
| MS.gene05913 | MS.gene30202 | 0.827759 | 1.31E-54 | -1.69E-46 |
| MS.gene05914 | MS.gene30202 | 0.840111 | 1.06E-57 | -1.69E-46 |
| MS.gene05926 | MS.gene30202 | -0.829028 | 6.47E-55 | -1.69E-46 |
| MS.gene059305 | MS.gene30202 | 0.829161 | 6.01E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene30202 | 0.852755 | 3.75E-61 | -1.69E-46 |
| MS.gene059455 | MS.gene30202 | 0.82311 | 1.65E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene30202 | 0.826616 | 2.46E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene30202 | 0.842994 | 1.84E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene30202 | 0.849031 | 4.20E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene30202 | 0.808819 | 2.57E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene30202 | 0.855907 | 4.60E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene30202 | 0.824782 | 6.70E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene30202 | 0.832289 | 1.03E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene30202 | 0.834721 | 2.55E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene30202 | 0.83328 | 5.84E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene30202 | 0.83907 | 1.97E-57 | -1.69E-46 |
| MS.gene06027 | MS.gene30202 | 0.814812 | 1.27E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene30202 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene30202 | 0.837813 | 4.16E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene30202 | 0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene060485 | MS.gene30202 | 0.825083 | 5.69E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene30202 | 0.87477 | 5.21E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene30202 | 0.810566 | 1.08E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene30202 | 0.847514 | 1.10E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene30202 | 0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene30202 | 0.810313 | 1.23E-50 | -1.69E-46 |
| MS.gene060832 | MS.gene30202 | 0.827578 | 1.45E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene30202 | 0.846621 | 1.94E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene30202 | 0.835628 | 1.50E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene30202 | 0.877711 | 5.05E-69 | -1.69E-46 |
| MS.gene06097 | MS.gene30202 | 0.857972 | 1.13E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene30202 | 0.857645 | 1.42E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene30202 | 0.822534 | 2.25E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene30202 | 0.863033 | 3.32E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30202.t1 | MTR_6g017260 | 97.802 | 273 | 5 | 1 | 10 | 282 | 9 | 280 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30202.t1 | AT5G38660 | 82.353 | 204 | 35 | 1 | 79 | 281 | 81 | 284 | 4.19e-124 | 355 |
| MS.gene30202.t1 | AT5G38660 | 84.444 | 180 | 28 | 0 | 79 | 258 | 81 | 260 | 4.70e-111 | 328 |
Find 62 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAAATTTACTTCATTCTT+TGG | 0.215046 | 6.3:-13202386 | MS.gene30202:CDS |
| TAAATACTCAGCTATGGTTT+TGG | 0.271343 | 6.3:-13205241 | MS.gene30202:intron |
| ACAGCTTCTCAGTCTTCTTC+TGG | 0.314907 | 6.3:-13206816 | MS.gene30202:CDS |
| CATGGAGAAGATGCAGCATT+AGG | 0.332558 | 6.3:+13202178 | None:intergenic |
| CTAAATTTACTTCATTCTTT+GGG | 0.335639 | 6.3:-13202385 | MS.gene30202:CDS |
| AGAATGGGTGCACTTCTTCT+AGG | 0.340329 | 6.3:+13203704 | None:intergenic |
| GCATACTTTAATATTCTTCC+TGG | 0.340893 | 6.3:-13205217 | MS.gene30202:CDS |
| AATAACTTACTAAACCATAT+TGG | 0.347677 | 6.3:+13204104 | None:intergenic |
| GGTTTCCCTCTTGCTATCAT+TGG | 0.351215 | 6.3:-13205163 | MS.gene30202:CDS |
| TGGAAAATATTGTTTGGTCT+TGG | 0.379387 | 6.3:-13203513 | MS.gene30202:CDS |
| CCAACTTCTGCTGTAATTCC+AGG | 0.392205 | 6.3:+13202362 | None:intergenic |
| CTTAGCATGAAAACATGAAA+TGG | 0.393570 | 6.3:+13206902 | None:intergenic |
| TGCAACTCCTATTCTTAAAC+AGG | 0.400679 | 6.3:-13204554 | MS.gene30202:intron |
| GAGATTACCTGTTTAAGAAT+AGG | 0.401480 | 6.3:+13204547 | None:intergenic |
| GAAGAATCAGCAGCTCTTAC+CGG | 0.412466 | 6.3:+13206846 | None:intergenic |
| TTCATCCCCATAGCGATATC+TGG | 0.412717 | 6.3:+13204159 | None:intergenic |
| CAGATTTCATTTGGTACGAT+TGG | 0.414434 | 6.3:-13205380 | MS.gene30202:CDS |
| CCCTCTTGCTATCATTGGCA+TGG | 0.426729 | 6.3:-13205158 | MS.gene30202:CDS |
| TGGGGATGAACAACACTTAG+AGG | 0.429272 | 6.3:-13204146 | MS.gene30202:CDS |
| ACAAGATGGAAAATATTGTT+TGG | 0.433342 | 6.3:-13203519 | MS.gene30202:CDS |
| ACAAGTGTCCTACTATCAAT+TGG | 0.438133 | 6.3:+13206789 | None:intergenic |
| TTTACTTCATTCTTTGGGCC+TGG | 0.441912 | 6.3:-13202380 | MS.gene30202:CDS |
| AAAACGATTTATATGAGGTT+CGG | 0.442396 | 6.3:-13202219 | MS.gene30202:CDS |
| ATGGAGAAGATGCAGCATTA+GGG | 0.446417 | 6.3:+13202179 | None:intergenic |
| GGAGACTTTGTGAGTTGAAG+AGG | 0.451225 | 6.3:+13206951 | None:intergenic |
| TCAGCTATAATGTTAACATA+TGG | 0.454586 | 6.3:-13205184 | MS.gene30202:CDS |
| TTCACGAACCATCTGTAGAA+TGG | 0.457796 | 6.3:+13203688 | None:intergenic |
| GGTACGATTGGACTAAGTCT+TGG | 0.477738 | 6.3:-13205368 | MS.gene30202:CDS |
| CTGGTGTTCCAATTGATAGT+AGG | 0.480393 | 6.3:-13206797 | MS.gene30202:CDS |
| GTGATGGAGATTTCATCATC+AGG | 0.487483 | 6.3:+13206765 | None:intergenic |
| TGCAAAGCCGTGTCCTCCTC+CGG | 0.488628 | 6.3:-13206996 | MS.gene30202:CDS |
| GAATGGGTGCACTTCTTCTA+GGG | 0.489478 | 6.3:+13203705 | None:intergenic |
| ATAGCTGACCATTCAGATCC+AGG | 0.491016 | 6.3:+13205199 | None:intergenic |
| TCACGAACCATCTGTAGAAT+GGG | 0.491160 | 6.3:+13203689 | None:intergenic |
| ATATTCTTCCTGGATCTGAA+TGG | 0.495071 | 6.3:-13205207 | MS.gene30202:CDS |
| CCGTGTCCTCCTCCGGTCAC+CGG | 0.495789 | 6.3:-13206989 | MS.gene30202:CDS |
| GAGGAGGTAGACAGTGGAAC+CGG | 0.499510 | 6.3:+13206970 | None:intergenic |
| GTGGAACCGGTGACCGGAGG+AGG | 0.512074 | 6.3:+13206983 | None:intergenic |
| ATGTTACCAGATATCGCTAT+GGG | 0.523814 | 6.3:-13204165 | MS.gene30202:CDS |
| GACTTTGTGAGTTGAAGAGG+AGG | 0.526582 | 6.3:+13206954 | None:intergenic |
| CCGGTGACCGGAGGAGGACA+CGG | 0.534166 | 6.3:+13206989 | None:intergenic |
| GGGCGAAAACGATTTATATG+AGG | 0.539741 | 6.3:-13202224 | MS.gene30202:CDS |
| TATCATTGGCATGGCACTCA+AGG | 0.540554 | 6.3:-13205149 | MS.gene30202:intron |
| ACTTAGAGGAGGCGTTGAAA+CGG | 0.543604 | 6.3:-13204132 | MS.gene30202:CDS |
| CCTGGAATTACAGCAGAAGT+TGG | 0.543795 | 6.3:-13202362 | MS.gene30202:intron |
| TAGACAGTGGAACCGGTGAC+CGG | 0.543841 | 6.3:+13206977 | None:intergenic |
| GCATATGTGAGGCATGGCAC+TGG | 0.549196 | 6.3:+13204604 | None:intergenic |
| TGAAAACATGAAATGGATTG+AGG | 0.565908 | 6.3:+13206909 | None:intergenic |
| TCTACAGATGGTTCGTGAAG+AGG | 0.578965 | 6.3:-13203684 | MS.gene30202:intron |
| TGATGAAATCTCCATCACTA+AGG | 0.585694 | 6.3:-13206760 | MS.gene30202:intron |
| GAGGGAGTATACCTTAGTGA+TGG | 0.593860 | 6.3:+13206749 | None:intergenic |
| GATGTTACCAGATATCGCTA+TGG | 0.596457 | 6.3:-13204166 | MS.gene30202:CDS |
| AAGTGCACCCATTCTACAGA+TGG | 0.605114 | 6.3:-13203696 | MS.gene30202:CDS |
| GCATCTGCATATGTGAGGCA+TGG | 0.614325 | 6.3:+13204598 | None:intergenic |
| GGATGAACAACAGAAACAAG+TGG | 0.616883 | 6.3:+13206930 | None:intergenic |
| GCCATGCCAATGATAGCAAG+AGG | 0.632297 | 6.3:+13205157 | None:intergenic |
| ACAGTGGAACCGGTGACCGG+AGG | 0.649556 | 6.3:+13206980 | None:intergenic |
| TGTAAGCATCTGCATATGTG+AGG | 0.663294 | 6.3:+13204593 | None:intergenic |
| GTTGAAGAGGAGGTAGACAG+TGG | 0.663467 | 6.3:+13206964 | None:intergenic |
| CCATGCCAATGATAGCAAGA+GGG | 0.670916 | 6.3:+13205158 | None:intergenic |
| GGATGAACAACACTTAGAGG+AGG | 0.707666 | 6.3:-13204143 | MS.gene30202:CDS |
| TGTTACCAGATATCGCTATG+GGG | 0.748811 | 6.3:-13204164 | MS.gene30202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAAAATGAG+AGG | + | chr6.3:13205120-13205139 | None:intergenic | 10.0% |
| !! | TTAAAAAAAGATAATGAAAA+AGG | + | chr6.3:13202469-13202488 | None:intergenic | 10.0% |
| !!! | TTTTTCATTATCTTTTTTTA+AGG | - | chr6.3:13202468-13202487 | MS.gene30202:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGACA+TGG | + | chr6.3:13204794-13204813 | None:intergenic | 10.0% |
| !! | AAGTAATTAAAAATGTATTC+AGG | + | chr6.3:13205763-13205782 | None:intergenic | 15.0% |
| !! | AGGAAAAAAAAAAAAACATA+AGG | + | chr6.3:13203916-13203935 | None:intergenic | 15.0% |
| !!! | AACTTATCAAAAAATGTTTT+AGG | + | chr6.3:13203227-13203246 | None:intergenic | 15.0% |
| !!! | ACTTATCAAAAAATGTTTTA+GGG | + | chr6.3:13203226-13203245 | None:intergenic | 15.0% |
| !!! | ATATCATAGTCATAAAATTT+TGG | + | chr6.3:13206040-13206059 | None:intergenic | 15.0% |
| !!! | GAGTATTTAAAACAAATAAA+AGG | + | chr6.3:13203936-13203955 | None:intergenic | 15.0% |
| !!! | TCAACTATAAATATTTTGTA+GGG | + | chr6.3:13205967-13205986 | None:intergenic | 15.0% |
| !! | AATAAATTGTTTATCCAAAC+AGG | + | chr6.3:13202649-13202668 | None:intergenic | 20.0% |
| !! | AATAACTTACTAAACCATAT+TGG | + | chr6.3:13205087-13205106 | None:intergenic | 20.0% |
| !! | AGAAGAAAGATTGAATATAT+TGG | + | chr6.3:13204959-13204978 | None:intergenic | 20.0% |
| !! | AGCTTATCAAATAACATTAA+AGG | - | chr6.3:13203089-13203108 | MS.gene30202:intron | 20.0% |
| !! | ATAAATTGTTTATCCAAACA+GGG | + | chr6.3:13202648-13202667 | None:intergenic | 20.0% |
| !! | CTAAATTTACTTCATTCTTT+GGG | - | chr6.3:13206803-13206822 | MS.gene30202:CDS | 20.0% |
| !! | CTACAAAATATTTATAGTTG+AGG | - | chr6.3:13205966-13205985 | MS.gene30202:intron | 20.0% |
| !! | TAATGATATATCAATGAAGA+AGG | + | chr6.3:13203883-13203902 | None:intergenic | 20.0% |
| !! | TTACTTAAAGTAAACTAAAC+AGG | - | chr6.3:13206326-13206345 | MS.gene30202:intron | 20.0% |
| !! | TTATACAAACTTCAATACAT+AGG | + | chr6.3:13203301-13203320 | None:intergenic | 20.0% |
| !! | TTATTGAATTATCTTCCAAA+TGG | - | chr6.3:13205138-13205157 | MS.gene30202:intron | 20.0% |
| !! | TTTATAATGTGGTTATGAAT+AGG | + | chr6.3:13206654-13206673 | None:intergenic | 20.0% |
| !!! | ATTCTTCATACTATTTTCAT+TGG | - | chr6.3:13204530-13204549 | MS.gene30202:intron | 20.0% |
| !!! | CTCAACTATAAATATTTTGT+AGG | + | chr6.3:13205968-13205987 | None:intergenic | 20.0% |
| !!! | TAAATTTTGCAGATTTCATT+TGG | - | chr6.3:13203799-13203818 | MS.gene30202:intron | 20.0% |
| !!! | TAAGTTTTATGAGAATGTTT+TGG | + | chr6.3:13202876-13202895 | None:intergenic | 20.0% |
| !!! | TAATAATATGCCTATGTTTT+AGG | - | chr6.3:13205642-13205661 | MS.gene30202:intron | 20.0% |
| !!! | TGATTTTTTATACTTAGAGT+TGG | + | chr6.3:13203667-13203686 | None:intergenic | 20.0% |
| ! | AAAACGATTTATATGAGGTT+CGG | - | chr6.3:13206969-13206988 | MS.gene30202:CDS | 25.0% |
| ! | AAACATAGGCATATTATTAG+AGG | + | chr6.3:13205641-13205660 | None:intergenic | 25.0% |
| ! | ACAAGATGGAAAATATTGTT+TGG | - | chr6.3:13205669-13205688 | MS.gene30202:intron | 25.0% |
| ! | ATGTGAATCATGTTATAAGA+AGG | - | chr6.3:13204080-13204099 | MS.gene30202:intron | 25.0% |
| ! | ATTCATCTTAAAAGTCTGAT+TGG | + | chr6.3:13205198-13205217 | None:intergenic | 25.0% |
| ! | ATTTCTCAACTTCTTCTATT+TGG | - | chr6.3:13206771-13206790 | MS.gene30202:CDS | 25.0% |
| ! | CATTATGTCTGTTTATAATG+TGG | + | chr6.3:13206665-13206684 | None:intergenic | 25.0% |
| ! | GAAATATATTAAAACTCCAG+AGG | + | chr6.3:13206756-13206775 | None:intergenic | 25.0% |
| ! | GATTCTTAAGAGATCAAATA+TGG | - | chr6.3:13206084-13206103 | MS.gene30202:intron | 25.0% |
| ! | GCTAAATTTACTTCATTCTT+TGG | - | chr6.3:13206802-13206821 | MS.gene30202:CDS | 25.0% |
| ! | GTTTACTGTTAAATGAGTTT+GGG | - | chr6.3:13203456-13203475 | MS.gene30202:intron | 25.0% |
| ! | TAAATATCTCAGTAACGAAT+TGG | + | chr6.3:13205937-13205956 | None:intergenic | 25.0% |
| ! | TCAAATAATTCAATCCAAGA+AGG | - | chr6.3:13206612-13206631 | MS.gene30202:intron | 25.0% |
| ! | TCAGCTATAATGTTAACATA+TGG | - | chr6.3:13204004-13204023 | MS.gene30202:intron | 25.0% |
| ! | TGTGTATGAAAATGAATGAA+TGG | - | chr6.3:13206911-13206930 | MS.gene30202:CDS | 25.0% |
| ! | TGTTTACTGTTAAATGAGTT+TGG | - | chr6.3:13203455-13203474 | MS.gene30202:intron | 25.0% |
| ! | TTGAAATATACTCTTGACTT+CGG | - | chr6.3:13203751-13203770 | MS.gene30202:intron | 25.0% |
| ! | TTTCTTCTAATCACTTAAAG+TGG | - | chr6.3:13204971-13204990 | MS.gene30202:intron | 25.0% |
| !! | AAGTCAAGAGTATATTTCAA+AGG | + | chr6.3:13203751-13203770 | None:intergenic | 25.0% |
| !! | ATGACTAAAAAAGACTTGTT+TGG | + | chr6.3:13203157-13203176 | None:intergenic | 25.0% |
| !! | ATTTTAAATGTCTCTTGTGA+TGG | - | chr6.3:13204697-13204716 | MS.gene30202:intron | 25.0% |
| !! | GTTGATAAATTAGCTTATAG+CGG | - | chr6.3:13202564-13202583 | MS.gene30202:intron | 25.0% |
| !! | TAAGTTTGTTTATCCAAAGA+GGG | + | chr6.3:13206369-13206388 | None:intergenic | 25.0% |
| !! | TTAAGTTTGTTTATCCAAAG+AGG | + | chr6.3:13206370-13206389 | None:intergenic | 25.0% |
| !!! | ATCAGACTTTTAAGATGAAT+TGG | - | chr6.3:13205198-13205217 | MS.gene30202:CDS | 25.0% |
| !!! | ATTATCTGCTTTTTGTTTCA+GGG | - | chr6.3:13205451-13205470 | MS.gene30202:intron | 25.0% |
| !!! | CTTACATAAGCTATTTCTAT+AGG | - | chr6.3:13202717-13202736 | MS.gene30202:intron | 25.0% |
| !!! | TATTATCTGCTTTTTGTTTC+AGG | - | chr6.3:13205450-13205469 | MS.gene30202:intron | 25.0% |
| !!! | TTGTTTTAAATACTCAGCTA+TGG | - | chr6.3:13203941-13203960 | MS.gene30202:intron | 25.0% |
| AAGTTGAGAGAAAAATGACA+TGG | - | chr6.3:13203035-13203054 | MS.gene30202:intron | 30.0% | |
| ACATAATGCTTTAACCTTAG+AGG | - | chr6.3:13206677-13206696 | MS.gene30202:intron | 30.0% | |
| AGATAATGAAAAAGGAACTG+AGG | + | chr6.3:13202461-13202480 | None:intergenic | 30.0% | |
| CATAATGCTTTAACCTTAGA+GGG | - | chr6.3:13206678-13206697 | MS.gene30202:intron | 30.0% | |
| CTTAGCATGAAAACATGAAA+TGG | + | chr6.3:13202289-13202308 | None:intergenic | 30.0% | |
| GAGATTACCTGTTTAAGAAT+AGG | + | chr6.3:13204644-13204663 | None:intergenic | 30.0% | |
| GATAATGAAAAAGGAACTGA+GGG | + | chr6.3:13202460-13202479 | None:intergenic | 30.0% | |
| GCATACTTTAATATTCTTCC+TGG | - | chr6.3:13203971-13203990 | MS.gene30202:intron | 30.0% | |
| GGCTAGTAAAAATAAGCTAT+AGG | - | chr6.3:13203110-13203129 | MS.gene30202:intron | 30.0% | |
| GTCAACATTAGAGATAGATT+TGG | - | chr6.3:13205561-13205580 | MS.gene30202:intron | 30.0% | |
| GTTGAAATTGTCAAAGTTTC+CGG | + | chr6.3:13203545-13203564 | None:intergenic | 30.0% | |
| TCATGTAAGAGTTTATGCAT+AGG | - | chr6.3:13206416-13206435 | MS.gene30202:intron | 30.0% | |
| TCTTAAGAGATCAAATATGG+TGG | - | chr6.3:13206087-13206106 | MS.gene30202:intron | 30.0% | |
| TGAAATATACTCTTGACTTC+GGG | - | chr6.3:13203752-13203771 | MS.gene30202:intron | 30.0% | |
| TGATATATCAATGAAGAAGG+TGG | + | chr6.3:13203880-13203899 | None:intergenic | 30.0% | |
| TGGAAAATATTGTTTGGTCT+TGG | - | chr6.3:13205675-13205694 | MS.gene30202:intron | 30.0% | |
| ! | AGCTTTTCTTCAAAAGCAAT+AGG | - | chr6.3:13202307-13202326 | MS.gene30202:intron | 30.0% |
| ! | ATAAATTAGCTTATAGCGGA+TGG | - | chr6.3:13202568-13202587 | MS.gene30202:intron | 30.0% |
| ! | CCATTTTCGCAAATTATTAC+CGG | - | chr6.3:13204443-13204462 | MS.gene30202:intron | 30.0% |
| ! | TAAATACTCAGCTATGGTTT+TGG | - | chr6.3:13203947-13203966 | MS.gene30202:intron | 30.0% |
| ! | TCAGTAACGAATTGGTAATT+TGG | + | chr6.3:13205929-13205948 | None:intergenic | 30.0% |
| ! | TTGCAACATTTTTGTGTGAA+AGG | + | chr6.3:13205856-13205875 | None:intergenic | 30.0% |
| ! | TTTCCATAACCTTTTCCAAA+TGG | - | chr6.3:13205253-13205272 | MS.gene30202:intron | 30.0% |
| !! | ATGTCTTTTGAGAAACATAG+AGG | + | chr6.3:13204842-13204861 | None:intergenic | 30.0% |
| !! | TGAAAACATGAAATGGATTG+AGG | + | chr6.3:13202282-13202301 | None:intergenic | 30.0% |
| !! | TGTCTTTTGAGAAACATAGA+GGG | + | chr6.3:13204841-13204860 | None:intergenic | 30.0% |
| !! | TTGAAACGGATTTTCCAATA+TGG | - | chr6.3:13205070-13205089 | MS.gene30202:intron | 30.0% |
| !!! | AAAATGTTTTAGGGACTGTT+TGG | + | chr6.3:13203217-13203236 | None:intergenic | 30.0% |
| !!! | ATTTTGAGACCATTTGGAAA+AGG | + | chr6.3:13205265-13205284 | None:intergenic | 30.0% |
| !!! | CAATAGGTTTAGTTTTGTTC+CGG | - | chr6.3:13202323-13202342 | MS.gene30202:intron | 30.0% |
| !!! | TAAGCAATTTTGAGACCATT+TGG | + | chr6.3:13205271-13205290 | None:intergenic | 30.0% |
| !!! | TCTTTTACATTTCTAGCAGT+TGG | - | chr6.3:13204728-13204747 | MS.gene30202:intron | 30.0% |
| !!! | TCTTTTTTTAAGGCTGTGTT+TGG | - | chr6.3:13202478-13202497 | MS.gene30202:intron | 30.0% |
| AAACCTATAAAACCAGCTCA+TGG | - | chr6.3:13206013-13206032 | MS.gene30202:intron | 35.0% | |
| AAATATACTCTTGACTTCGG+GGG | - | chr6.3:13203754-13203773 | MS.gene30202:intron | 35.0% | |
| AATATTTGTGCTGCAGGTAA+GGG | - | chr6.3:13206944-13206963 | MS.gene30202:CDS | 35.0% | |
| ACAAGTGTCCTACTATCAAT+TGG | + | chr6.3:13202402-13202421 | None:intergenic | 35.0% | |
| ACACTGACACTTCAAATTGA+AGG | - | chr6.3:13204363-13204382 | MS.gene30202:intron | 35.0% | |
| AGACCATTTGGAAAAGGTTA+TGG | + | chr6.3:13205259-13205278 | None:intergenic | 35.0% | |
| ATAGGCTCGTAAGAAAACAA+CGG | - | chr6.3:13203128-13203147 | MS.gene30202:intron | 35.0% | |
| ATATTCTTCCTGGATCTGAA+TGG | - | chr6.3:13203981-13204000 | MS.gene30202:intron | 35.0% | |
| ATCCAAAGAGGGTTTAATGA+GGG | + | chr6.3:13206358-13206377 | None:intergenic | 35.0% | |
| ATGTTACCAGATATCGCTAT+GGG | - | chr6.3:13205023-13205042 | MS.gene30202:intron | 35.0% | |
| CAGATTTCATTTGGTACGAT+TGG | - | chr6.3:13203808-13203827 | MS.gene30202:intron | 35.0% | |
| CTTCATCCTAAAGGTCTATT+TGG | + | chr6.3:13205323-13205342 | None:intergenic | 35.0% | |
| GAAATATACTCTTGACTTCG+GGG | - | chr6.3:13203753-13203772 | MS.gene30202:intron | 35.0% | |
| GTCAATCCAAATAGACCTTT+AGG | - | chr6.3:13205314-13205333 | MS.gene30202:intron | 35.0% | |
| GTTGCAATGATACGAATTGT+CGG | - | chr6.3:13205869-13205888 | MS.gene30202:intron | 35.0% | |
| TAATATTTGTGCTGCAGGTA+AGG | - | chr6.3:13206943-13206962 | MS.gene30202:CDS | 35.0% | |
| TATCCAAAGAGGGTTTAATG+AGG | + | chr6.3:13206359-13206378 | None:intergenic | 35.0% | |
| TCTAGATAATGCAGCTAGTA+TGG | + | chr6.3:13205384-13205403 | None:intergenic | 35.0% | |
| TCTGCATACTGCAAAAAAGA+CGG | + | chr6.3:13204557-13204576 | None:intergenic | 35.0% | |
| TCTGTAAATGTAAGATCCTC+TGG | - | chr6.3:13206737-13206756 | MS.gene30202:intron | 35.0% | |
| TCTTGTGTGACCTAAAACAT+AGG | + | chr6.3:13205655-13205674 | None:intergenic | 35.0% | |
| TGACATAATATTTGTGCTGC+AGG | - | chr6.3:13206938-13206957 | MS.gene30202:CDS | 35.0% | |
| TGATGAAATCTCCATCACTA+AGG | - | chr6.3:13202428-13202447 | MS.gene30202:intron | 35.0% | |
| TGCAACTCCTATTCTTAAAC+AGG | - | chr6.3:13204634-13204653 | MS.gene30202:intron | 35.0% | |
| TGCAATGTACATGTGTACTT+AGG | + | chr6.3:13203518-13203537 | None:intergenic | 35.0% | |
| TTAAATAAGCCAATCCAACC+AGG | - | chr6.3:13202911-13202930 | MS.gene30202:intron | 35.0% | |
| ! | AAGTCTTATCCCACTAAGTT+GGG | + | chr6.3:13205597-13205616 | None:intergenic | 35.0% |
| ! | ACTTCAAATTGAAGGTGTGT+CGG | - | chr6.3:13204371-13204390 | MS.gene30202:intron | 35.0% |
| ! | ATGTTGTGACACTCTTTTCT+TGG | - | chr6.3:13204878-13204897 | MS.gene30202:intron | 35.0% |
| ! | CCGGTAATAATTTGCGAAAA+TGG | + | chr6.3:13204446-13204465 | None:intergenic | 35.0% |
| ! | GAATAGGATTAGCACTACTA+AGG | + | chr6.3:13206638-13206657 | None:intergenic | 35.0% |
| ! | TAAAATTTTGGACCATGAGC+TGG | + | chr6.3:13206028-13206047 | None:intergenic | 35.0% |
| ! | TGGCTCTTTTGTGCTTTTAA+AGG | - | chr6.3:13204991-13205010 | MS.gene30202:intron | 35.0% |
| !! | ATGTTTTAGGTCACACAAGA+TGG | - | chr6.3:13205655-13205674 | MS.gene30202:intron | 35.0% |
| !! | CAAATAGACCTTTAGGATGA+AGG | - | chr6.3:13205321-13205340 | MS.gene30202:intron | 35.0% |
| !! | GTTGTTTTCATAAGCTGTCT+TGG | - | chr6.3:13202782-13202801 | MS.gene30202:intron | 35.0% |
| !! | TATAGCTTTAGCCAAAACCA+TGG | - | chr6.3:13206136-13206155 | MS.gene30202:intron | 35.0% |
| !! | TGCTTTTTGTTTCAGGGAAA+TGG | - | chr6.3:13205457-13205476 | MS.gene30202:intron | 35.0% |
| !!! | CAGACTCTTGTTTTGTTTGA+CGG | + | chr6.3:13206189-13206208 | None:intergenic | 35.0% |
| !!! | TTTTTTAAGGCTGTGTTTGG+TGG | - | chr6.3:13202481-13202500 | MS.gene30202:intron | 35.0% |
| AACCCTCATTAAACCCTCTT+TGG | - | chr6.3:13206353-13206372 | MS.gene30202:intron | 40.0% | |
| AAGCATTCCACTCTGATCAA+AGG | - | chr6.3:13205902-13205921 | MS.gene30202:intron | 40.0% | |
| AATAGACGACCCAACTTAGT+GGG | - | chr6.3:13205585-13205604 | MS.gene30202:intron | 40.0% | |
| ACGAAAAAAGTTCTTCCTCC+AGG | + | chr6.3:13206246-13206265 | None:intergenic | 40.0% | |
| ATGGAGAAGATGCAGCATTA+GGG | + | chr6.3:13207012-13207031 | None:intergenic | 40.0% | |
| ATTGTGTGTCCAGTCATGTT+GGG | - | chr6.3:13204248-13204267 | MS.gene30202:intron | 40.0% | |
| ATTTGGTCCTTTGATCAGAG+TGG | + | chr6.3:13205912-13205931 | None:intergenic | 40.0% | |
| CACATGTACATTGCATAGTC+CGG | - | chr6.3:13203523-13203542 | MS.gene30202:CDS | 40.0% | |
| CTTACCAAATACTACAAGCC+TGG | + | chr6.3:13202932-13202951 | None:intergenic | 40.0% | |
| GATGTTACCAGATATCGCTA+TGG | - | chr6.3:13205022-13205041 | MS.gene30202:intron | 40.0% | |
| GGATGAACAACAGAAACAAG+TGG | + | chr6.3:13202261-13202280 | None:intergenic | 40.0% | |
| GGGCGAAAACGATTTATATG+AGG | - | chr6.3:13206964-13206983 | MS.gene30202:CDS | 40.0% | |
| TAAGCTGATTGAACCCTGTT+TGG | - | chr6.3:13202632-13202651 | MS.gene30202:intron | 40.0% | |
| TAATAGACGACCCAACTTAG+TGG | - | chr6.3:13205584-13205603 | MS.gene30202:intron | 40.0% | |
| TCACCTTCTTAATGTTCGTG+CGG | - | chr6.3:13204274-13204293 | MS.gene30202:intron | 40.0% | |
| TCACGAACCATCTGTAGAAT+GGG | + | chr6.3:13205502-13205521 | None:intergenic | 40.0% | |
| TGTAAGCATCTGCATATGTG+AGG | + | chr6.3:13204598-13204617 | None:intergenic | 40.0% | |
| TGTTACCAGATATCGCTATG+GGG | - | chr6.3:13205024-13205043 | MS.gene30202:intron | 40.0% | |
| TTCACGAACCATCTGTAGAA+TGG | + | chr6.3:13205503-13205522 | None:intergenic | 40.0% | |
| TTTACTTCATTCTTTGGGCC+TGG | - | chr6.3:13206808-13206827 | MS.gene30202:CDS | 40.0% | |
| ! | ATTGCAACAAGAGCACATAG+AGG | + | chr6.3:13205418-13205437 | None:intergenic | 40.0% |
| ! | CTGGTGTTCCAATTGATAGT+AGG | - | chr6.3:13202391-13202410 | MS.gene30202:intron | 40.0% |
| ! | CTTTTGCTCCTTCATCCTAA+AGG | + | chr6.3:13205332-13205351 | None:intergenic | 40.0% |
| ! | GAAGTCTTATCCCACTAAGT+TGG | + | chr6.3:13205598-13205617 | None:intergenic | 40.0% |
| ! | GTCAGATTTTGAACAGAGAC+AGG | - | chr6.3:13205723-13205742 | MS.gene30202:intron | 40.0% |
| ! | GTGATGGAGATTTCATCATC+AGG | + | chr6.3:13202426-13202445 | None:intergenic | 40.0% |
| !! | CTTCTTCTATTTGGTGTTGC+AGG | - | chr6.3:13206780-13206799 | MS.gene30202:CDS | 40.0% |
| !!! | CTCTTGTTTTGTTTGACGGT+TGG | + | chr6.3:13206185-13206204 | None:intergenic | 40.0% |
| !!! | GTTTTGTTTGACGGTTGGAT+TGG | + | chr6.3:13206180-13206199 | None:intergenic | 40.0% |
| !!! | TCTGCACTTTTGAGACCATT+TGG | + | chr6.3:13205156-13205175 | None:intergenic | 40.0% |
| !!! | TTGTTTGGTCTTGGTTTTCG+AGG | - | chr6.3:13205684-13205703 | MS.gene30202:intron | 40.0% |
| AACTTACACAATGCCCGGAT+AGG | - | chr6.3:13203379-13203398 | MS.gene30202:intron | 45.0% | |
| AAGTGCACCCATTCTACAGA+TGG | - | chr6.3:13205492-13205511 | MS.gene30202:intron | 45.0% | |
| ACAGCTTCTCAGTCTTCTTC+TGG | - | chr6.3:13202372-13202391 | MS.gene30202:CDS | 45.0% | |
| ACGGACATGAGTTGTACACT+CGG | - | chr6.3:13204181-13204200 | MS.gene30202:intron | 45.0% | |
| AGAATGGGTGCACTTCTTCT+AGG | + | chr6.3:13205487-13205506 | None:intergenic | 45.0% | |
| AGGTGAAATCCCAACATGAC+TGG | + | chr6.3:13204260-13204279 | None:intergenic | 45.0% | |
| ATAGCTGACCATTCAGATCC+AGG | + | chr6.3:13203992-13204011 | None:intergenic | 45.0% | |
| ATGATGCGTCCATACCTATC+CGG | + | chr6.3:13203396-13203415 | None:intergenic | 45.0% | |
| CAACATTGACACATCGACAC+CGG | + | chr6.3:13204465-13204484 | None:intergenic | 45.0% | |
| CAACCGCACGAACATTAAGA+AGG | + | chr6.3:13204280-13204299 | None:intergenic | 45.0% | |
| CACTGACACGTCAAGTTTGA+AGG | + | chr6.3:13204212-13204231 | None:intergenic | 45.0% | |
| CATGGAGAAGATGCAGCATT+AGG | + | chr6.3:13207013-13207032 | None:intergenic | 45.0% | |
| CATTGTGTGTCCAGTCATGT+TGG | - | chr6.3:13204247-13204266 | MS.gene30202:intron | 45.0% | |
| CCAAATACTACAAGCCTGGT+TGG | + | chr6.3:13202928-13202947 | None:intergenic | 45.0% | |
| CCAACCAGGCTTGTAGTATT+TGG | - | chr6.3:13202925-13202944 | MS.gene30202:intron | 45.0% | |
| CCAACTTCTGCTGTAATTCC+AGG | + | chr6.3:13206829-13206848 | None:intergenic | 45.0% | |
| CCATGCCAATGATAGCAAGA+GGG | + | chr6.3:13204033-13204052 | None:intergenic | 45.0% | |
| CCTGGAATTACAGCAGAAGT+TGG | - | chr6.3:13206826-13206845 | MS.gene30202:CDS | 45.0% | |
| CTCACCTCTTCATGAGCATA+AGG | - | chr6.3:13205802-13205821 | MS.gene30202:intron | 45.0% | |
| GAAGAATCAGCAGCTCTTAC+CGG | + | chr6.3:13202345-13202364 | None:intergenic | 45.0% | |
| GAATGGGTGCACTTCTTCTA+GGG | + | chr6.3:13205486-13205505 | None:intergenic | 45.0% | |
| GCTGCATTATCTAGACACTG+AGG | - | chr6.3:13205389-13205408 | MS.gene30202:intron | 45.0% | |
| GGATGAACAACACTTAGAGG+AGG | - | chr6.3:13205045-13205064 | MS.gene30202:intron | 45.0% | |
| GGTACGATTGGACTAAGTCT+TGG | - | chr6.3:13203820-13203839 | MS.gene30202:intron | 45.0% | |
| GTGTCCTTATGCTCATGAAG+AGG | + | chr6.3:13205809-13205828 | None:intergenic | 45.0% | |
| TACTACAAGCCTGGTTGGAT+TGG | + | chr6.3:13202923-13202942 | None:intergenic | 45.0% | |
| TAGCACTACTAAGGCCTTCT+TGG | + | chr6.3:13206629-13206648 | None:intergenic | 45.0% | |
| TATCATTGGCATGGCACTCA+AGG | - | chr6.3:13204039-13204058 | MS.gene30202:intron | 45.0% | |
| TCCAGAACTTACACAATGCC+CGG | - | chr6.3:13203374-13203393 | MS.gene30202:intron | 45.0% | |
| TCTACAGATGGTTCGTGAAG+AGG | - | chr6.3:13205504-13205523 | MS.gene30202:intron | 45.0% | |
| TGCTGAAGAGCTATGAGCTA+TGG | + | chr6.3:13204511-13204530 | None:intergenic | 45.0% | |
| TGGGGATGAACAACACTTAG+AGG | - | chr6.3:13205042-13205061 | MS.gene30202:intron | 45.0% | |
| TTCATCCCCATAGCGATATC+TGG | + | chr6.3:13205032-13205051 | None:intergenic | 45.0% | |
| ! | AATTGAAGGTGTGTCGGTGT+TGG | - | chr6.3:13204377-13204396 | MS.gene30202:intron | 45.0% |
| ! | ATTCTAGAAGCAGCCCTCTA+AGG | + | chr6.3:13206694-13206713 | None:intergenic | 45.0% |
| ! | CCTCCAGGAAAAAGTACACT+TGG | + | chr6.3:13206231-13206250 | None:intergenic | 45.0% |
| ! | GACTTTGTGAGTTGAAGAGG+AGG | + | chr6.3:13202237-13202256 | None:intergenic | 45.0% |
| ! | GAGGGAGTATACCTTAGTGA+TGG | + | chr6.3:13202442-13202461 | None:intergenic | 45.0% |
| ! | GGAGACTTTGTGAGTTGAAG+AGG | + | chr6.3:13202240-13202259 | None:intergenic | 45.0% |
| ! | GGTTTCCCTCTTGCTATCAT+TGG | - | chr6.3:13204025-13204044 | MS.gene30202:intron | 45.0% |
| !! | ACTTAGAGGAGGCGTTGAAA+CGG | - | chr6.3:13205056-13205075 | MS.gene30202:intron | 45.0% |
| !! | GGTGTCGATGTGTCAATGTT+GGG | - | chr6.3:13204464-13204483 | MS.gene30202:intron | 45.0% |
| !! | GTTTTGGTGGATGCTTCTCT+GGG | - | chr6.3:13204320-13204339 | MS.gene30202:intron | 45.0% |
| !! | TTCGGGGGATATTGATTCTC+AGG | - | chr6.3:13203769-13203788 | MS.gene30202:intron | 45.0% |
| !!! | CCAAGTGTACTTTTTCCTGG+AGG | - | chr6.3:13206228-13206247 | MS.gene30202:intron | 45.0% |
| !!! | GCTCCAAGTGTACTTTTTCC+TGG | - | chr6.3:13206225-13206244 | MS.gene30202:intron | 45.0% |
| !!! | GGACCATGAGCTGGTTTTAT+AGG | + | chr6.3:13206019-13206038 | None:intergenic | 45.0% |
| !!! | GTTCTATGCACTGGTTTTGG+TGG | - | chr6.3:13204307-13204326 | MS.gene30202:intron | 45.0% |
| ACACAATGCCCGGATAGGTA+TGG | - | chr6.3:13203384-13203403 | MS.gene30202:intron | 50.0% | |
| GCATCTGCATATGTGAGGCA+TGG | + | chr6.3:13204593-13204612 | None:intergenic | 50.0% | |
| GCCATGCCAATGATAGCAAG+AGG | + | chr6.3:13204034-13204053 | None:intergenic | 50.0% | |
| GTTGAAGAGGAGGTAGACAG+TGG | + | chr6.3:13202227-13202246 | None:intergenic | 50.0% | |
| TCAATCATGGCGAGTCACCA+TGG | + | chr6.3:13206156-13206175 | None:intergenic | 50.0% | |
| TGATGCGTCCATACCTATCC+GGG | + | chr6.3:13203395-13203414 | None:intergenic | 50.0% | |
| TGCTTTGCGGTTCTATGCAC+TGG | - | chr6.3:13204298-13204317 | MS.gene30202:intron | 50.0% | |
| TGTCATGCGAGTGTCAGACA+CGG | - | chr6.3:13204162-13204181 | MS.gene30202:CDS | 50.0% | |
| ! | ATGGCGAGTCACCATGGTTT+TGG | + | chr6.3:13206150-13206169 | None:intergenic | 50.0% |
| ! | ATGTTCGTGCGGTTGCTTTG+CGG | - | chr6.3:13204285-13204304 | MS.gene30202:intron | 50.0% |
| ! | CCCTCTTGCTATCATTGGCA+TGG | - | chr6.3:13204030-13204049 | MS.gene30202:intron | 50.0% |
| ! | TCCGGGCATTGTGTAAGTTC+TGG | + | chr6.3:13203378-13203397 | None:intergenic | 50.0% |
| !! | CGGTGTCGATGTGTCAATGT+TGG | - | chr6.3:13204463-13204482 | MS.gene30202:intron | 50.0% |
| !! | GGTCTTGGTTTTCGAGGCTA+AGG | - | chr6.3:13205690-13205709 | MS.gene30202:intron | 50.0% |
| !! | GGTTTTGGTGGATGCTTCTC+TGG | - | chr6.3:13204319-13204338 | MS.gene30202:intron | 50.0% |
| !!! | GCGGTTCTATGCACTGGTTT+TGG | - | chr6.3:13204304-13204323 | MS.gene30202:intron | 50.0% |
| GAGGAGGTAGACAGTGGAAC+CGG | + | chr6.3:13202221-13202240 | None:intergenic | 55.0% | |
| GCATATGTGAGGCATGGCAC+TGG | + | chr6.3:13204587-13204606 | None:intergenic | 55.0% | |
| TAGACAGTGGAACCGGTGAC+CGG | + | chr6.3:13202214-13202233 | None:intergenic | 55.0% | |
| TGCAAAGCCGTGTCCTCCTC+CGG | - | chr6.3:13202192-13202211 | MS.gene30202:CDS | 60.0% | |
| ACAGTGGAACCGGTGACCGG+AGG | + | chr6.3:13202211-13202230 | None:intergenic | 65.0% | |
| CCGGTGACCGGAGGAGGACA+CGG | + | chr6.3:13202202-13202221 | None:intergenic | 70.0% | |
| CCGTGTCCTCCTCCGGTCAC+CGG | - | chr6.3:13202199-13202218 | MS.gene30202:CDS | 70.0% | |
| GTGGAACCGGTGACCGGAGG+AGG | + | chr6.3:13202208-13202227 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 13202177 | 13207033 | 13202177 | ID=MS.gene30202 |
| chr6.3 | mRNA | 13202177 | 13207033 | 13202177 | ID=MS.gene30202.t1;Parent=MS.gene30202 |
| chr6.3 | exon | 13206761 | 13207033 | 13206761 | ID=MS.gene30202.t1.exon1;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13206761 | 13207033 | 13206761 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13205353 | 13205399 | 13205353 | ID=MS.gene30202.t1.exon2;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13205353 | 13205399 | 13205353 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13205150 | 13205252 | 13205150 | ID=MS.gene30202.t1.exon3;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13205150 | 13205252 | 13205150 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13204555 | 13204641 | 13204555 | ID=MS.gene30202.t1.exon4;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13204555 | 13204641 | 13204555 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13204114 | 13204197 | 13204114 | ID=MS.gene30202.t1.exon5;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13204114 | 13204197 | 13204114 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13203685 | 13203738 | 13203685 | ID=MS.gene30202.t1.exon6;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13203685 | 13203738 | 13203685 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13203466 | 13203546 | 13203466 | ID=MS.gene30202.t1.exon7;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13203466 | 13203546 | 13203466 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13202363 | 13202408 | 13202363 | ID=MS.gene30202.t1.exon8;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13202363 | 13202408 | 13202363 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| chr6.3 | exon | 13202177 | 13202250 | 13202177 | ID=MS.gene30202.t1.exon9;Parent=MS.gene30202.t1 |
| chr6.3 | CDS | 13202177 | 13202250 | 13202177 | ID=cds.MS.gene30202.t1;Parent=MS.gene30202.t1 |
| Gene Sequence |
| Protein sequence |
