Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39629.t1 | XP_003608006.1 | 84.7 | 281 | 11 | 1 | 1 | 249 | 1 | 281 | 3.40E-134 | 487.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39629.t1 | Q9SMN0 | 42.6 | 282 | 121 | 4 | 7 | 247 | 1 | 282 | 1.1e-61 | 238.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39629.t1 | G7JME9 | 84.7 | 281 | 11 | 1 | 1 | 249 | 1 | 281 | 2.5e-134 | 487.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene39629 | 0.83983 | 1.25E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene39629 | 0.896369 | 3.94E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene39629 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene39629 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene39629 | 0.867451 | 1.36E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene39629 | 0.828945 | 6.78E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene39629 | 0.886286 | 3.91E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene39629 | 0.880901 | 3.74E-70 | -1.69E-46 |
| MS.gene049373 | MS.gene39629 | 0.817689 | 2.89E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene39629 | 0.83616 | 1.10E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene39629 | 0.876187 | 1.70E-68 | -1.69E-46 |
| MS.gene049627 | MS.gene39629 | 0.801042 | 1.09E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene39629 | 0.887202 | 1.76E-72 | -1.69E-46 |
| MS.gene049805 | MS.gene39629 | 0.827929 | 1.19E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene39629 | 0.829044 | 6.42E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene39629 | 0.859834 | 3.14E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene39629 | 0.841446 | 4.73E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene39629 | 0.830819 | 2.37E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene39629 | 0.892583 | 1.39E-74 | -1.69E-46 |
| MS.gene050323 | MS.gene39629 | 0.88061 | 4.77E-70 | -1.69E-46 |
| MS.gene050333 | MS.gene39629 | 0.819824 | 9.48E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene39629 | 0.836263 | 1.04E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene39629 | 0.856303 | 3.52E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene39629 | 0.882767 | 7.90E-71 | -1.69E-46 |
| MS.gene050518 | MS.gene39629 | 0.847351 | 1.22E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene39629 | 0.815516 | 8.88E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene39629 | 0.902328 | 1.08E-78 | -1.69E-46 |
| MS.gene050593 | MS.gene39629 | 0.809519 | 1.82E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene39629 | 0.873606 | 1.29E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene39629 | 0.869808 | 2.34E-66 | -1.69E-46 |
| MS.gene050690 | MS.gene39629 | 0.806896 | 6.58E-50 | -1.69E-46 |
| MS.gene050697 | MS.gene39629 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene39629 | 0.905406 | 4.44E-80 | -1.69E-46 |
| MS.gene050747 | MS.gene39629 | 0.864552 | 1.12E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene39629 | 0.876479 | 1.35E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene39629 | 0.856248 | 3.66E-62 | -1.69E-46 |
| MS.gene05081 | MS.gene39629 | 0.857487 | 1.58E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene39629 | 0.857757 | 1.31E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene39629 | 0.857128 | 2.02E-62 | -1.69E-46 |
| MS.gene050904 | MS.gene39629 | 0.850818 | 1.33E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene39629 | 0.864211 | 1.43E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene39629 | 0.883319 | 4.96E-71 | -1.69E-46 |
| MS.gene05100 | MS.gene39629 | 0.81221 | 4.76E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene39629 | -0.814183 | 1.75E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene39629 | 0.822346 | 2.49E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene39629 | 0.881003 | 3.44E-70 | -1.69E-46 |
| MS.gene051336 | MS.gene39629 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene39629 | 0.858103 | 1.04E-62 | -1.69E-46 |
| MS.gene051810 | MS.gene39629 | 0.839253 | 1.77E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene39629 | 0.890697 | 7.80E-74 | -1.69E-46 |
| MS.gene051858 | MS.gene39629 | 0.819337 | 1.22E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene39629 | 0.837169 | 6.09E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene39629 | 0.869301 | 3.43E-66 | -1.69E-46 |
| MS.gene052318 | MS.gene39629 | 0.848962 | 4.39E-60 | -1.69E-46 |
| MS.gene052346 | MS.gene39629 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene39629 | 0.802844 | 4.63E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene39629 | 0.877246 | 7.33E-69 | -1.69E-46 |
| MS.gene052486 | MS.gene39629 | 0.892057 | 2.25E-74 | -1.69E-46 |
| MS.gene052501 | MS.gene39629 | 0.863883 | 1.81E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene39629 | 0.919241 | 5.76E-87 | -1.69E-46 |
| MS.gene052505 | MS.gene39629 | 0.853934 | 1.72E-61 | -1.69E-46 |
| MS.gene052506 | MS.gene39629 | 0.838838 | 2.27E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene39629 | 0.880296 | 6.17E-70 | -1.69E-46 |
| MS.gene052822 | MS.gene39629 | 0.841138 | 5.70E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene39629 | 0.916061 | 2.80E-85 | -1.69E-46 |
| MS.gene052825 | MS.gene39629 | 0.910632 | 1.51E-82 | -1.69E-46 |
| MS.gene052870 | MS.gene39629 | 0.832454 | 9.36E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene39629 | 0.854218 | 1.43E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene39629 | 0.845697 | 3.45E-59 | -1.69E-46 |
| MS.gene053117 | MS.gene39629 | 0.8302 | 3.36E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene39629 | 0.881014 | 3.41E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene39629 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene39629 | 0.875675 | 2.56E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene39629 | 0.874127 | 8.61E-68 | -1.69E-46 |
| MS.gene053421 | MS.gene39629 | -0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene39629 | 0.852438 | 4.62E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene39629 | 0.870526 | 1.37E-66 | -1.69E-46 |
| MS.gene053480 | MS.gene39629 | 0.983457 | 8.52E-158 | -1.69E-46 |
| MS.gene053574 | MS.gene39629 | 0.866167 | 3.47E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene39629 | 0.830857 | 2.32E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene39629 | 0.874166 | 8.35E-68 | -1.69E-46 |
| MS.gene053824 | MS.gene39629 | 0.890623 | 8.34E-74 | -1.69E-46 |
| MS.gene053916 | MS.gene39629 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene39629 | 0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene39629 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene054270 | MS.gene39629 | -0.800955 | 1.13E-48 | -1.69E-46 |
| MS.gene054343 | MS.gene39629 | 0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene39629 | 0.847588 | 1.05E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene39629 | 0.845791 | 3.26E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene39629 | 0.875975 | 2.02E-68 | -1.69E-46 |
| MS.gene054600 | MS.gene39629 | 0.881835 | 1.72E-70 | -1.69E-46 |
| MS.gene054642 | MS.gene39629 | 0.846741 | 1.80E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene39629 | -0.811738 | 6.03E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene39629 | 0.900871 | 4.75E-78 | -1.69E-46 |
| MS.gene054927 | MS.gene39629 | 0.844269 | 8.39E-59 | -1.69E-46 |
| MS.gene05494 | MS.gene39629 | 0.827866 | 1.23E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene39629 | 0.879993 | 7.91E-70 | -1.69E-46 |
| MS.gene05505 | MS.gene39629 | 0.819672 | 1.03E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene39629 | 0.856883 | 2.38E-62 | -1.69E-46 |
| MS.gene055224 | MS.gene39629 | 0.8335 | 5.15E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene39629 | 0.818568 | 1.83E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene39629 | 0.887868 | 9.77E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene39629 | 0.899822 | 1.35E-77 | -1.69E-46 |
| MS.gene055577 | MS.gene39629 | 0.864239 | 1.40E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene39629 | 0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene39629 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene39629 | 0.846238 | 2.46E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene39629 | 0.85088 | 1.28E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene39629 | 0.845037 | 5.21E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene39629 | 0.810445 | 1.15E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene39629 | 0.900892 | 4.65E-78 | -1.69E-46 |
| MS.gene055941 | MS.gene39629 | 0.869418 | 3.14E-66 | -1.69E-46 |
| MS.gene056040 | MS.gene39629 | 0.835729 | 1.42E-56 | -1.69E-46 |
| MS.gene056046 | MS.gene39629 | 0.831471 | 1.64E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene39629 | 0.834018 | 3.82E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene39629 | 0.815866 | 7.42E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene39629 | 0.857254 | 1.85E-62 | -1.69E-46 |
| MS.gene056409 | MS.gene39629 | 0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene39629 | 0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene39629 | 0.815282 | 1.00E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene39629 | 0.814562 | 1.45E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene39629 | 0.897983 | 8.28E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene39629 | 0.87363 | 1.27E-67 | -1.69E-46 |
| MS.gene056610 | MS.gene39629 | 0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene39629 | 0.885944 | 5.25E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene39629 | 0.865021 | 7.98E-65 | -1.69E-46 |
| MS.gene056877 | MS.gene39629 | 0.816443 | 5.51E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene39629 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene39629 | 0.832651 | 8.37E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene39629 | 0.812346 | 4.44E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene39629 | 0.843933 | 1.03E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene39629 | 0.877648 | 5.31E-69 | -1.69E-46 |
| MS.gene057086 | MS.gene39629 | 0.804275 | 2.34E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene39629 | 0.810749 | 9.88E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene39629 | 0.801145 | 1.03E-48 | -1.69E-46 |
| MS.gene057332 | MS.gene39629 | 0.830388 | 3.02E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene39629 | 0.852657 | 4.00E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene39629 | 0.883877 | 3.09E-71 | -1.69E-46 |
| MS.gene057734 | MS.gene39629 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene39629 | 0.879477 | 1.21E-69 | -1.69E-46 |
| MS.gene057856 | MS.gene39629 | 0.841522 | 4.52E-58 | -1.69E-46 |
| MS.gene057857 | MS.gene39629 | 0.833848 | 4.21E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene39629 | 0.864581 | 1.10E-64 | -1.69E-46 |
| MS.gene058019 | MS.gene39629 | 0.818752 | 1.66E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene39629 | 0.819464 | 1.15E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene39629 | 0.836524 | 8.90E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene39629 | -0.816832 | 4.51E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene39629 | 0.874171 | 8.32E-68 | -1.69E-46 |
| MS.gene05837 | MS.gene39629 | 0.869318 | 3.39E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene39629 | 0.900338 | 8.09E-78 | -1.69E-46 |
| MS.gene058544 | MS.gene39629 | 0.873839 | 1.08E-67 | -1.69E-46 |
| MS.gene058719 | MS.gene39629 | 0.819706 | 1.01E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene39629 | 0.821321 | 4.30E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene39629 | 0.849239 | 3.67E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene39629 | 0.886568 | 3.05E-72 | -1.69E-46 |
| MS.gene05883 | MS.gene39629 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene39629 | 0.872967 | 2.12E-67 | -1.69E-46 |
| MS.gene059023 | MS.gene39629 | 0.919511 | 4.11E-87 | -1.69E-46 |
| MS.gene05912 | MS.gene39629 | 0.80314 | 4.02E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene39629 | 0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene39629 | 0.84128 | 5.23E-58 | -1.69E-46 |
| MS.gene059303 | MS.gene39629 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene39629 | 0.831153 | 1.96E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene39629 | 0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene39629 | 0.834748 | 2.51E-56 | -1.69E-46 |
| MS.gene059667 | MS.gene39629 | 0.86003 | 2.74E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene39629 | 0.895054 | 1.38E-75 | -1.69E-46 |
| MS.gene059718 | MS.gene39629 | 0.882755 | 7.98E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene39629 | 0.894473 | 2.39E-75 | -1.69E-46 |
| MS.gene059801 | MS.gene39629 | 0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene39629 | 0.831657 | 1.47E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene39629 | 0.856735 | 2.63E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene39629 | 0.809752 | 1.62E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene39629 | 0.875193 | 3.74E-68 | -1.69E-46 |
| MS.gene06027 | MS.gene39629 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene39629 | 0.842417 | 2.62E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene39629 | 0.854371 | 1.29E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene39629 | 0.869368 | 3.26E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene39629 | 0.87888 | 1.96E-69 | -1.69E-46 |
| MS.gene06077 | MS.gene39629 | 0.897154 | 1.85E-76 | -1.69E-46 |
| MS.gene060835 | MS.gene39629 | 0.852442 | 4.60E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene39629 | 0.860717 | 1.70E-63 | -1.69E-46 |
| MS.gene06097 | MS.gene39629 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene39629 | 0.887146 | 1.84E-72 | -1.69E-46 |
| MS.gene061150 | MS.gene39629 | 0.851162 | 1.06E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39629.t1 | MTR_4g086470 | 84.946 | 279 | 10 | 1 | 1 | 247 | 1 | 279 | 2.55e-170 | 473 |
| MS.gene39629.t1 | MTR_4g086480 | 75.532 | 282 | 36 | 2 | 1 | 249 | 1 | 282 | 6.00e-156 | 436 |
| MS.gene39629.t1 | MTR_4g086510 | 55.986 | 284 | 87 | 3 | 1 | 249 | 1 | 281 | 3.18e-114 | 330 |
| MS.gene39629.t1 | MTR_7g056207 | 55.160 | 281 | 88 | 3 | 2 | 247 | 34 | 311 | 1.13e-110 | 323 |
| MS.gene39629.t1 | MTR_3g101420 | 43.494 | 269 | 115 | 4 | 14 | 247 | 10 | 276 | 3.13e-68 | 213 |
| MS.gene39629.t1 | MTR_1g105020 | 42.143 | 280 | 118 | 7 | 10 | 247 | 7 | 284 | 5.61e-68 | 213 |
| MS.gene39629.t1 | MTR_5g005850 | 39.310 | 290 | 131 | 8 | 1 | 247 | 3 | 290 | 5.74e-67 | 211 |
| MS.gene39629.t1 | MTR_4g086540 | 42.586 | 263 | 127 | 4 | 3 | 247 | 10 | 266 | 6.43e-65 | 205 |
| MS.gene39629.t1 | MTR_3g450680 | 40.141 | 284 | 127 | 7 | 6 | 247 | 11 | 293 | 9.72e-62 | 197 |
| MS.gene39629.t1 | MTR_5g005900 | 37.979 | 287 | 133 | 7 | 4 | 246 | 2 | 287 | 8.46e-56 | 182 |
| MS.gene39629.t1 | MTR_8g040860 | 39.350 | 277 | 128 | 7 | 10 | 247 | 15 | 290 | 1.87e-55 | 181 |
| MS.gene39629.t1 | MTR_1g104930 | 39.789 | 284 | 127 | 7 | 4 | 247 | 5 | 284 | 2.63e-52 | 172 |
| MS.gene39629.t1 | MTR_5g005920 | 36.332 | 289 | 141 | 9 | 2 | 247 | 4 | 292 | 7.54e-52 | 172 |
| MS.gene39629.t1 | MTR_7g051020 | 39.085 | 284 | 132 | 6 | 4 | 247 | 5 | 287 | 2.41e-50 | 167 |
| MS.gene39629.t1 | MTR_1g104933 | 39.576 | 283 | 127 | 7 | 3 | 247 | 2 | 278 | 1.22e-47 | 160 |
| MS.gene39629.t1 | MTR_1g012430 | 35.165 | 273 | 130 | 6 | 14 | 247 | 6 | 270 | 1.61e-40 | 142 |
| MS.gene39629.t1 | MTR_4g050140 | 32.593 | 270 | 140 | 5 | 18 | 247 | 12 | 279 | 7.01e-37 | 132 |
| MS.gene39629.t1 | MTR_1g111280 | 30.576 | 278 | 146 | 4 | 14 | 247 | 29 | 303 | 1.75e-36 | 132 |
| MS.gene39629.t1 | MTR_7g406880 | 29.371 | 286 | 143 | 7 | 18 | 247 | 28 | 310 | 9.04e-34 | 125 |
| MS.gene39629.t1 | MTR_1g102160 | 40.260 | 154 | 85 | 2 | 24 | 175 | 24 | 172 | 3.33e-32 | 120 |
| MS.gene39629.t1 | MTR_6g464120 | 31.321 | 265 | 135 | 6 | 24 | 245 | 29 | 289 | 5.96e-29 | 114 |
| MS.gene39629.t1 | MTR_3g012440 | 28.125 | 224 | 123 | 2 | 61 | 246 | 73 | 296 | 5.55e-27 | 107 |
| MS.gene39629.t1 | MTR_1g102170 | 35.542 | 166 | 98 | 3 | 24 | 187 | 43 | 201 | 6.45e-27 | 106 |
| MS.gene39629.t1 | MTR_6g464320 | 29.344 | 259 | 130 | 7 | 38 | 248 | 39 | 292 | 2.15e-26 | 105 |
| MS.gene39629.t1 | MTR_7g107040 | 28.467 | 274 | 153 | 6 | 14 | 247 | 10 | 280 | 3.87e-26 | 104 |
| MS.gene39629.t1 | MTR_6g464280 | 36.306 | 157 | 88 | 3 | 38 | 190 | 38 | 186 | 1.33e-25 | 102 |
| MS.gene39629.t1 | MTR_6g464510 | 37.342 | 158 | 87 | 4 | 38 | 190 | 42 | 192 | 4.89e-25 | 101 |
| MS.gene39629.t1 | MTR_8g035540 | 38.732 | 142 | 81 | 3 | 38 | 175 | 32 | 171 | 9.95e-25 | 100 |
| MS.gene39629.t1 | MTR_1g089310 | 32.857 | 210 | 98 | 5 | 73 | 246 | 118 | 320 | 1.31e-23 | 98.2 |
| MS.gene39629.t1 | MTR_1g089310 | 32.857 | 210 | 98 | 5 | 73 | 246 | 102 | 304 | 1.35e-23 | 97.8 |
| MS.gene39629.t1 | MTR_8g035520 | 37.324 | 142 | 87 | 2 | 36 | 175 | 38 | 179 | 2.13e-23 | 97.1 |
| MS.gene39629.t1 | MTR_6g065110 | 28.889 | 270 | 139 | 5 | 24 | 247 | 37 | 299 | 7.72e-23 | 95.9 |
| MS.gene39629.t1 | MTR_0007s0520 | 32.759 | 174 | 103 | 3 | 1 | 174 | 12 | 171 | 5.07e-22 | 93.2 |
| MS.gene39629.t1 | MTR_1g082210 | 30.038 | 263 | 129 | 8 | 33 | 247 | 50 | 305 | 5.72e-22 | 93.6 |
| MS.gene39629.t1 | MTR_6g065120 | 29.889 | 271 | 136 | 6 | 24 | 247 | 37 | 300 | 7.95e-22 | 93.2 |
| MS.gene39629.t1 | MTR_8g035500 | 29.134 | 254 | 135 | 6 | 38 | 248 | 33 | 284 | 3.39e-21 | 90.9 |
| MS.gene39629.t1 | MTR_6g065430 | 30.189 | 265 | 137 | 7 | 24 | 247 | 35 | 292 | 3.62e-21 | 91.3 |
| MS.gene39629.t1 | MTR_6g065340 | 30.000 | 240 | 132 | 5 | 38 | 247 | 60 | 293 | 3.10e-20 | 88.6 |
| MS.gene39629.t1 | MTR_7g093950 | 31.222 | 221 | 94 | 6 | 73 | 247 | 103 | 311 | 5.61e-20 | 87.8 |
| MS.gene39629.t1 | MTR_6g065400 | 28.516 | 256 | 131 | 5 | 38 | 247 | 49 | 298 | 1.32e-18 | 84.0 |
| MS.gene39629.t1 | MTR_6g065370 | 28.906 | 256 | 130 | 5 | 38 | 247 | 49 | 298 | 1.36e-18 | 84.0 |
| MS.gene39629.t1 | MTR_6g065270 | 34.868 | 152 | 79 | 4 | 38 | 176 | 47 | 191 | 5.47e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39629.t1 | AT3G48690 | 42.553 | 282 | 121 | 4 | 7 | 247 | 1 | 282 | 3.23e-76 | 234 |
| MS.gene39629.t1 | AT3G48700 | 42.807 | 285 | 118 | 5 | 7 | 246 | 1 | 285 | 4.41e-75 | 231 |
| MS.gene39629.t1 | AT1G19190 | 42.754 | 276 | 122 | 4 | 7 | 247 | 1 | 275 | 7.61e-73 | 225 |
| MS.gene39629.t1 | AT2G03550 | 43.636 | 275 | 118 | 5 | 7 | 247 | 1 | 272 | 1.06e-72 | 224 |
| MS.gene39629.t1 | AT1G49660 | 43.972 | 282 | 110 | 4 | 7 | 245 | 1 | 277 | 1.30e-71 | 222 |
| MS.gene39629.t1 | AT1G49650 | 43.015 | 272 | 112 | 6 | 16 | 247 | 66 | 334 | 4.65e-70 | 220 |
| MS.gene39629.t1 | AT1G49640 | 42.164 | 268 | 112 | 6 | 17 | 246 | 12 | 274 | 8.50e-69 | 215 |
| MS.gene39629.t1 | AT1G47480 | 43.369 | 279 | 116 | 6 | 1 | 246 | 1 | 270 | 3.41e-68 | 213 |
| MS.gene39629.t1 | AT1G68620 | 29.818 | 275 | 143 | 8 | 5 | 237 | 17 | 283 | 6.08e-32 | 120 |
| MS.gene39629.t1 | AT5G16080 | 28.571 | 280 | 146 | 8 | 14 | 247 | 31 | 302 | 3.72e-27 | 107 |
| MS.gene39629.t1 | AT2G45600 | 38.129 | 139 | 79 | 3 | 38 | 172 | 31 | 166 | 4.03e-24 | 99.0 |
| MS.gene39629.t1 | AT5G27320 | 29.008 | 262 | 132 | 6 | 33 | 247 | 50 | 304 | 6.32e-24 | 99.0 |
| MS.gene39629.t1 | AT3G05120 | 28.409 | 264 | 133 | 7 | 33 | 247 | 50 | 306 | 4.48e-23 | 96.7 |
| MS.gene39629.t1 | AT5G62180 | 36.170 | 141 | 81 | 2 | 38 | 174 | 38 | 173 | 4.57e-22 | 93.6 |
| MS.gene39629.t1 | AT5G06570 | 29.537 | 281 | 154 | 6 | 10 | 247 | 9 | 288 | 1.53e-21 | 92.0 |
| MS.gene39629.t1 | AT5G06570 | 29.537 | 281 | 154 | 6 | 10 | 247 | 9 | 288 | 1.53e-21 | 92.0 |
| MS.gene39629.t1 | AT5G06570 | 29.537 | 281 | 154 | 6 | 10 | 247 | 24 | 303 | 1.77e-21 | 92.0 |
| MS.gene39629.t1 | AT5G06570 | 29.537 | 281 | 154 | 6 | 10 | 247 | 24 | 303 | 1.77e-21 | 92.0 |
| MS.gene39629.t1 | AT2G45610 | 28.685 | 251 | 133 | 6 | 42 | 248 | 42 | 290 | 3.67e-21 | 90.9 |
| MS.gene39629.t1 | AT3G63010 | 29.323 | 266 | 130 | 8 | 33 | 248 | 50 | 307 | 6.44e-21 | 90.9 |
| MS.gene39629.t1 | AT5G23530 | 34.783 | 138 | 82 | 2 | 37 | 174 | 51 | 180 | 6.53e-19 | 84.7 |
Find 58 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGTGGGTGATTGGTTT+TGG | 0.145456 | 4.2:-24504023 | None:intergenic |
| GCTAATATTTCACACTATTT+AGG | 0.162895 | 4.2:+24504334 | MS.gene39629:CDS |
| TTTAGATTCAACGTTGGTTT+TGG | 0.202200 | 4.2:-24503951 | None:intergenic |
| ACTTCACTTGCTAATGTTAT+TGG | 0.227846 | 4.2:+24504139 | MS.gene39629:CDS |
| CCATTGCTCATGAAGATTCA+TGG | 0.261987 | 4.2:+24504203 | MS.gene39629:CDS |
| TTGAGGTAGTTATGGTAGTT+TGG | 0.286089 | 4.2:-24504109 | None:intergenic |
| CCCGGCTAATGATCCCGATT+TGG | 0.313711 | 4.2:+24504544 | MS.gene39629:CDS |
| CCGGCTAATGATCCCGATTT+GGG | 0.325716 | 4.2:+24504545 | MS.gene39629:CDS |
| CTTTCTCAAAATCTGCATAT+TGG | 0.331880 | 4.2:-24504285 | None:intergenic |
| AGATTGCTTGTTTGTGTTGC+TGG | 0.344082 | 4.2:+24504584 | MS.gene39629:CDS |
| CCTGTCTTTGTTTACTTTCA+CGG | 0.344106 | 4.2:+24504055 | MS.gene39629:CDS |
| TGCTGAGATGTTATGTTCTT+CGG | 0.344889 | 4.2:-24503987 | None:intergenic |
| GGTCGTGTGGAAAATCTAAT+AGG | 0.345060 | 4.2:+24503899 | MS.gene39629:CDS |
| GCTTCACATGTTGGTGGAAA+TGG | 0.350595 | 4.2:+24504244 | MS.gene39629:CDS |
| AATTGGATCAGAATCAAATA+TGG | 0.360234 | 4.2:+24504442 | MS.gene39629:intron |
| ATTCATGGCTTGCACTCAAA+TGG | 0.361551 | 4.2:+24504218 | MS.gene39629:CDS |
| TAGAAAAGATTCATAATTTG+TGG | 0.374091 | 4.2:+24504474 | MS.gene39629:CDS |
| TCTTCATGAGCAATGGGAAC+AGG | 0.384148 | 4.2:-24504196 | None:intergenic |
| AATGGCTATTTCGTCGTTGA+TGG | 0.384770 | 4.2:-24503843 | None:intergenic |
| TAACAGAGTTGAGGTAGTTA+TGG | 0.398147 | 4.2:-24504117 | None:intergenic |
| TTATGGTAGTTTGGTGAGAA+AGG | 0.405757 | 4.2:-24504100 | None:intergenic |
| TGATCCCGATTTGGGGAAGT+TGG | 0.407781 | 4.2:+24504553 | MS.gene39629:CDS |
| ACAACCCAACTTCCCCAAAT+CGG | 0.414443 | 4.2:-24504558 | None:intergenic |
| AATCAACGGGTCGTCAGATC+CGG | 0.425185 | 4.2:-24504519 | None:intergenic |
| GATCCCGATTTGGGGAAGTT+GGG | 0.451553 | 4.2:+24504554 | MS.gene39629:CDS |
| CCCAAATCGGGATCATTAGC+CGG | 0.457367 | 4.2:-24504545 | None:intergenic |
| GCAATGGGAACAGGGTGTTC+CGG | 0.459329 | 4.2:-24504187 | None:intergenic |
| TTTGTTTACTTTCACGGCGG+TGG | 0.469368 | 4.2:+24504061 | MS.gene39629:CDS |
| CATTAGCCGGGTTAATCAAC+GGG | 0.471264 | 4.2:-24504532 | None:intergenic |
| CCAAATCGGGATCATTAGCC+GGG | 0.473736 | 4.2:-24504544 | None:intergenic |
| CAACCCAACTTCCCCAAATC+GGG | 0.476448 | 4.2:-24504557 | None:intergenic |
| TTCATGGCTTGCACTCAAAT+GGG | 0.480049 | 4.2:+24504219 | MS.gene39629:CDS |
| AGTGGTTTGGGGTGGTGTTG+TGG | 0.484269 | 4.2:+24504659 | MS.gene39629:CDS |
| CATGAATCTTCATGAGCAAT+GGG | 0.488874 | 4.2:-24504202 | None:intergenic |
| GATTGCTTGTTTGTGTTGCT+GGG | 0.495692 | 4.2:+24504585 | MS.gene39629:CDS |
| CCGTGAAAGTAAACAAAGAC+AGG | 0.497695 | 4.2:-24504055 | None:intergenic |
| GGCTATTTCGTCGTTGATGG+TGG | 0.504951 | 4.2:-24503840 | None:intergenic |
| TTTGAGAAAGTGTTCTTAGG+AGG | 0.509667 | 4.2:+24504298 | MS.gene39629:CDS |
| CCATGAATCTTCATGAGCAA+TGG | 0.523102 | 4.2:-24504203 | None:intergenic |
| TCGTCAGATCCGGTCGTGGT+TGG | 0.537151 | 4.2:-24504509 | None:intergenic |
| TTTACATGTCCAACCACGAC+CGG | 0.538692 | 4.2:+24504500 | MS.gene39629:CDS |
| GTGGAAATGGCTCTGATGAA+TGG | 0.542774 | 4.2:+24504257 | MS.gene39629:CDS |
| TATTTCGTCGTTGATGGTGG+AGG | 0.545398 | 4.2:-24503837 | None:intergenic |
| TTCTTAGGAGGTGATAGTGC+TGG | 0.559579 | 4.2:+24504310 | MS.gene39629:CDS |
| TCATTAGCCGGGTTAATCAA+CGG | 0.564768 | 4.2:-24504533 | None:intergenic |
| CGGGTCGTCAGATCCGGTCG+TGG | 0.575435 | 4.2:-24504513 | None:intergenic |
| AAATGGGTTGCTTCACATGT+TGG | 0.579541 | 4.2:+24504235 | MS.gene39629:CDS |
| TTTGTATACTCTCAAGATTG+GGG | 0.592780 | 4.2:-24503873 | None:intergenic |
| CTTCATGAGCAATGGGAACA+GGG | 0.596332 | 4.2:-24504195 | None:intergenic |
| TGGGTTGCTTCACATGTTGG+TGG | 0.616285 | 4.2:+24504238 | MS.gene39629:CDS |
| TTGTATACTCTCAAGATTGG+GGG | 0.619560 | 4.2:-24503872 | None:intergenic |
| TGTTCACTACAGAAGAGCAC+CGG | 0.621670 | 4.2:+24504168 | MS.gene39629:CDS |
| TGACGACCCGTTGATTAACC+CGG | 0.631546 | 4.2:+24504526 | MS.gene39629:CDS |
| GTCTTTGTTTACTTTCACGG+CGG | 0.634625 | 4.2:+24504058 | MS.gene39629:CDS |
| CGTGAAAGTAAACAAAGACA+GGG | 0.635829 | 4.2:-24504054 | None:intergenic |
| AACGTCTTTAGATTCAACGT+TGG | 0.641244 | 4.2:-24503957 | None:intergenic |
| CGGCTAATGATCCCGATTTG+GGG | 0.655506 | 4.2:+24504546 | MS.gene39629:CDS |
| CAAGTGAAGTAACAGAGTTG+AGG | 0.663575 | 4.2:-24504126 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAAAGATTCATAATTTG+TGG | + | chr4.2:24504474-24504493 | MS.gene39629:CDS | 20.0% |
| !!! | TTATATCCATCCTTATTTTT+GGG | + | chr4.2:24504408-24504427 | MS.gene39629:intron | 20.0% |
| !!! | TTTATATCCATCCTTATTTT+TGG | + | chr4.2:24504407-24504426 | MS.gene39629:intron | 20.0% |
| ! | AAAGAATTGCTTGAAAAAAG+TGG | + | chr4.2:24504641-24504660 | MS.gene39629:CDS | 25.0% |
| ! | AATTGGATCAGAATCAAATA+TGG | + | chr4.2:24504442-24504461 | MS.gene39629:intron | 25.0% |
| ! | ATATTTGATTCTGATCCAAT+TGG | - | chr4.2:24504443-24504462 | None:intergenic | 25.0% |
| ! | GCTAATATTTCACACTATTT+AGG | + | chr4.2:24504334-24504353 | MS.gene39629:CDS | 25.0% |
| ! | TTTCACACTATTTAGGTATT+CGG | + | chr4.2:24504341-24504360 | MS.gene39629:intron | 25.0% |
| !! | ATCTTGAGAGTATACAAAAA+CGG | + | chr4.2:24503878-24503897 | MS.gene39629:CDS | 25.0% |
| !! | TTTTGTATACTCTCAAGATT+GGG | - | chr4.2:24503877-24503896 | None:intergenic | 25.0% |
| !! | TTTTTGTATACTCTCAAGAT+TGG | - | chr4.2:24503878-24503897 | None:intergenic | 25.0% |
| !!! | TATATCCATCCTTATTTTTG+GGG | + | chr4.2:24504409-24504428 | MS.gene39629:intron | 25.0% |
| ACTATTTAGGTATTCGGTTT+GGG | + | chr4.2:24504347-24504366 | MS.gene39629:intron | 30.0% | |
| ATTGCTTGAAAAAAGTGGTT+TGG | + | chr4.2:24504646-24504665 | MS.gene39629:CDS | 30.0% | |
| CTTTCTCAAAATCTGCATAT+TGG | - | chr4.2:24504288-24504307 | None:intergenic | 30.0% | |
| TTGCTTGAAAAAAGTGGTTT+GGG | + | chr4.2:24504647-24504666 | MS.gene39629:CDS | 30.0% | |
| TTTGTATACTCTCAAGATTG+GGG | - | chr4.2:24503876-24503895 | None:intergenic | 30.0% | |
| ! | ACTTCACTTGCTAATGTTAT+TGG | + | chr4.2:24504139-24504158 | MS.gene39629:CDS | 30.0% |
| !! | AAAGATATTTTGAGGGATAG+GGG | + | chr4.2:24504608-24504627 | MS.gene39629:CDS | 30.0% |
| !! | GAAAGATATTTTGAGGGATA+GGG | + | chr4.2:24504607-24504626 | MS.gene39629:CDS | 30.0% |
| !!! | ATATCCATCCTTATTTTTGG+GGG | + | chr4.2:24504410-24504429 | MS.gene39629:intron | 30.0% |
| !!! | GATTTTGAGAAAGTGTTCTT+AGG | + | chr4.2:24504295-24504314 | MS.gene39629:CDS | 30.0% |
| !!! | TTAGATTCAACGTTGGTTTT+GGG | - | chr4.2:24503953-24503972 | None:intergenic | 30.0% |
| !!! | TTTAGATTCAACGTTGGTTT+TGG | - | chr4.2:24503954-24503973 | None:intergenic | 30.0% |
| AACGTCTTTAGATTCAACGT+TGG | - | chr4.2:24503960-24503979 | None:intergenic | 35.0% | |
| CACTATTTAGGTATTCGGTT+TGG | + | chr4.2:24504346-24504365 | MS.gene39629:intron | 35.0% | |
| CATGAATCTTCATGAGCAAT+GGG | - | chr4.2:24504205-24504224 | None:intergenic | 35.0% | |
| CGTGAAAGTAAACAAAGACA+GGG | - | chr4.2:24504057-24504076 | None:intergenic | 35.0% | |
| TAACAGAGTTGAGGTAGTTA+TGG | - | chr4.2:24504120-24504139 | None:intergenic | 35.0% | |
| TGCTGAGATGTTATGTTCTT+CGG | - | chr4.2:24503990-24504009 | None:intergenic | 35.0% | |
| TGCTTGAAAAAAGTGGTTTG+GGG | + | chr4.2:24504648-24504667 | MS.gene39629:CDS | 35.0% | |
| TTGAGGTAGTTATGGTAGTT+TGG | - | chr4.2:24504112-24504131 | None:intergenic | 35.0% | |
| TTGTATACTCTCAAGATTGG+GGG | - | chr4.2:24503875-24503894 | None:intergenic | 35.0% | |
| TTTGGGAAGGAAAATTTGGA+TGG | + | chr4.2:24504364-24504383 | MS.gene39629:intron | 35.0% | |
| ! | AAACAAAGACAGGGAGTTTT+TGG | - | chr4.2:24504048-24504067 | None:intergenic | 35.0% |
| ! | AACAAAGACAGGGAGTTTTT+GGG | - | chr4.2:24504047-24504066 | None:intergenic | 35.0% |
| ! | CCTGTCTTTGTTTACTTTCA+CGG | + | chr4.2:24504055-24504074 | MS.gene39629:CDS | 35.0% |
| ! | TGGATGGTTTGAAACTTGAA+GGG | + | chr4.2:24504380-24504399 | MS.gene39629:intron | 35.0% |
| ! | TTATGGTAGTTTGGTGAGAA+AGG | - | chr4.2:24504103-24504122 | None:intergenic | 35.0% |
| ! | TTGCTGGGAAAGATATTTTG+AGG | + | chr4.2:24504600-24504619 | MS.gene39629:CDS | 35.0% |
| ! | TTGGATGGTTTGAAACTTGA+AGG | + | chr4.2:24504379-24504398 | MS.gene39629:intron | 35.0% |
| !! | GGAAAGATATTTTGAGGGAT+AGG | + | chr4.2:24504606-24504625 | MS.gene39629:CDS | 35.0% |
| !! | TGCTGGGAAAGATATTTTGA+GGG | + | chr4.2:24504601-24504620 | MS.gene39629:CDS | 35.0% |
| !! | TTTGAGAAAGTGTTCTTAGG+AGG | + | chr4.2:24504298-24504317 | MS.gene39629:CDS | 35.0% |
| AGATTGCTTGTTTGTGTTGC+TGG | + | chr4.2:24504584-24504603 | MS.gene39629:CDS | 40.0% | |
| AGTATACAAAAACGGTCGTG+TGG | + | chr4.2:24503886-24503905 | MS.gene39629:CDS | 40.0% | |
| CAAGTGAAGTAACAGAGTTG+AGG | - | chr4.2:24504129-24504148 | None:intergenic | 40.0% | |
| CCATGAATCTTCATGAGCAA+TGG | - | chr4.2:24504206-24504225 | None:intergenic | 40.0% | |
| CCATTGCTCATGAAGATTCA+TGG | + | chr4.2:24504203-24504222 | MS.gene39629:CDS | 40.0% | |
| CCGTGAAAGTAAACAAAGAC+AGG | - | chr4.2:24504058-24504077 | None:intergenic | 40.0% | |
| GGTCGTGTGGAAAATCTAAT+AGG | + | chr4.2:24503899-24503918 | MS.gene39629:CDS | 40.0% | |
| TCATTAGCCGGGTTAATCAA+CGG | - | chr4.2:24504536-24504555 | None:intergenic | 40.0% | |
| ! | AATGGCTATTTCGTCGTTGA+TGG | - | chr4.2:24503846-24503865 | None:intergenic | 40.0% |
| ! | ATTCATGGCTTGCACTCAAA+TGG | + | chr4.2:24504218-24504237 | MS.gene39629:CDS | 40.0% |
| ! | CAAGATTGGGGGTATATCAA+TGG | - | chr4.2:24503864-24503883 | None:intergenic | 40.0% |
| ! | GATTGCTTGTTTGTGTTGCT+GGG | + | chr4.2:24504585-24504604 | MS.gene39629:CDS | 40.0% |
| ! | GTCTTTGTTTACTTTCACGG+CGG | + | chr4.2:24504058-24504077 | MS.gene39629:CDS | 40.0% |
| ! | TTCATGGCTTGCACTCAAAT+GGG | + | chr4.2:24504219-24504238 | MS.gene39629:CDS | 40.0% |
| ! | TTGAAAAAAGTGGTTTGGGG+TGG | + | chr4.2:24504651-24504670 | MS.gene39629:CDS | 40.0% |
| !! | AAATGGGTTGCTTCACATGT+TGG | + | chr4.2:24504235-24504254 | MS.gene39629:CDS | 40.0% |
| !! | TCGGTTTGGGAAGGAAAATT+TGG | + | chr4.2:24504360-24504379 | MS.gene39629:intron | 40.0% |
| !! | TTTAGGTATTCGGTTTGGGA+AGG | + | chr4.2:24504351-24504370 | MS.gene39629:intron | 40.0% |
| !!! | TTGGTTTTGGGATCAAGAGA+TGG | - | chr4.2:24503941-24503960 | None:intergenic | 40.0% |
| ACAACCCAACTTCCCCAAAT+CGG | - | chr4.2:24504561-24504580 | None:intergenic | 45.0% | |
| CACACCCCCAAAAATAAGGA+TGG | - | chr4.2:24504417-24504436 | None:intergenic | 45.0% | |
| CATTAGCCGGGTTAATCAAC+GGG | - | chr4.2:24504535-24504554 | None:intergenic | 45.0% | |
| CTTCATGAGCAATGGGAACA+GGG | - | chr4.2:24504198-24504217 | None:intergenic | 45.0% | |
| GATCCACACCCCCAAAAATA+AGG | - | chr4.2:24504421-24504440 | None:intergenic | 45.0% | |
| TCTTCATGAGCAATGGGAAC+AGG | - | chr4.2:24504199-24504218 | None:intergenic | 45.0% | |
| TTTACATGTCCAACCACGAC+CGG | + | chr4.2:24504500-24504519 | MS.gene39629:CDS | 45.0% | |
| TTTGTTTACTTTCACGGCGG+TGG | + | chr4.2:24504061-24504080 | MS.gene39629:CDS | 45.0% | |
| ! | GCTTCACATGTTGGTGGAAA+TGG | + | chr4.2:24504244-24504263 | MS.gene39629:CDS | 45.0% |
| ! | TGTTCACTACAGAAGAGCAC+CGG | + | chr4.2:24504168-24504187 | MS.gene39629:CDS | 45.0% |
| ! | TTCTTAGGAGGTGATAGTGC+TGG | + | chr4.2:24504310-24504329 | MS.gene39629:CDS | 45.0% |
| !! | GTGGAAATGGCTCTGATGAA+TGG | + | chr4.2:24504257-24504276 | MS.gene39629:CDS | 45.0% |
| !! | TATTTCGTCGTTGATGGTGG+AGG | - | chr4.2:24503840-24503859 | None:intergenic | 45.0% |
| !!! | AAGACAGGGAGTTTTTGGGT+TGG | - | chr4.2:24504043-24504062 | None:intergenic | 45.0% |
| !!! | CATCCTTATTTTTGGGGGTG+TGG | + | chr4.2:24504415-24504434 | MS.gene39629:intron | 45.0% |
| !!! | GTTGGTGGGTGATTGGTTTT+GGG | - | chr4.2:24504025-24504044 | None:intergenic | 45.0% |
| !!! | GTTTTGGGATCAAGAGATGG+AGG | - | chr4.2:24503938-24503957 | None:intergenic | 45.0% |
| !!! | TTTTTGGGTTGGTGGGTGAT+TGG | - | chr4.2:24504032-24504051 | None:intergenic | 45.0% |
| AATCAACGGGTCGTCAGATC+CGG | - | chr4.2:24504522-24504541 | None:intergenic | 50.0% | |
| CAACCCAACTTCCCCAAATC+GGG | - | chr4.2:24504560-24504579 | None:intergenic | 50.0% | |
| CCAAATCGGGATCATTAGCC+GGG | - | chr4.2:24504547-24504566 | None:intergenic | 50.0% | |
| CCCAAATCGGGATCATTAGC+CGG | - | chr4.2:24504548-24504567 | None:intergenic | 50.0% | |
| CCGGCTAATGATCCCGATTT+GGG | + | chr4.2:24504545-24504564 | MS.gene39629:CDS | 50.0% | |
| TGGGTTGCTTCACATGTTGG+TGG | + | chr4.2:24504238-24504257 | MS.gene39629:CDS | 50.0% | |
| ! | CGGCTAATGATCCCGATTTG+GGG | + | chr4.2:24504546-24504565 | MS.gene39629:CDS | 50.0% |
| ! | GGCTATTTCGTCGTTGATGG+TGG | - | chr4.2:24503843-24503862 | None:intergenic | 50.0% |
| ! | TGACGACCCGTTGATTAACC+CGG | + | chr4.2:24504526-24504545 | MS.gene39629:CDS | 50.0% |
| ! | TTTGGGGGTGTGGATCCAAT+TGG | + | chr4.2:24504425-24504444 | MS.gene39629:intron | 50.0% |
| !! | GATCCCGATTTGGGGAAGTT+GGG | + | chr4.2:24504554-24504573 | MS.gene39629:CDS | 50.0% |
| !! | TGATCCCGATTTGGGGAAGT+TGG | + | chr4.2:24504553-24504572 | MS.gene39629:CDS | 50.0% |
| !!! | ACAGGGAGTTTTTGGGTTGG+TGG | - | chr4.2:24504040-24504059 | None:intergenic | 50.0% |
| !!! | CAGGGAGTTTTTGGGTTGGT+GGG | - | chr4.2:24504039-24504058 | None:intergenic | 50.0% |
| !!! | GGTTGGTGGGTGATTGGTTT+TGG | - | chr4.2:24504026-24504045 | None:intergenic | 50.0% |
| CCCGGCTAATGATCCCGATT+TGG | + | chr4.2:24504544-24504563 | MS.gene39629:CDS | 55.0% | |
| ! | AGTGGTTTGGGGTGGTGTTG+TGG | + | chr4.2:24504659-24504678 | MS.gene39629:CDS | 55.0% |
| ! | GCAATGGGAACAGGGTGTTC+CGG | - | chr4.2:24504190-24504209 | None:intergenic | 55.0% |
| TCGTCAGATCCGGTCGTGGT+TGG | - | chr4.2:24504512-24504531 | None:intergenic | 60.0% | |
| CGGGTCGTCAGATCCGGTCG+TGG | - | chr4.2:24504516-24504535 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24503827 | 24504691 | 24503827 | ID=MS.gene39629 |
| chr4.2 | mRNA | 24503827 | 24504691 | 24503827 | ID=MS.gene39629.t1;Parent=MS.gene39629 |
| chr4.2 | exon | 24503827 | 24504355 | 24503827 | ID=MS.gene39629.t1.exon1;Parent=MS.gene39629.t1 |
| chr4.2 | CDS | 24503827 | 24504355 | 24503827 | ID=cds.MS.gene39629.t1;Parent=MS.gene39629.t1 |
| chr4.2 | exon | 24504453 | 24504691 | 24504453 | ID=MS.gene39629.t1.exon2;Parent=MS.gene39629.t1 |
| chr4.2 | CDS | 24504453 | 24504691 | 24504453 | ID=cds.MS.gene39629.t1;Parent=MS.gene39629.t1 |
| Gene Sequence |
| Protein sequence |
