Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063115.t1 | PNY08193.1 | 86.5 | 542 | 59 | 6 | 1 | 537 | 1 | 533 | 1.30E-255 | 892.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063115.t1 | Q9STG9 | 84.2 | 487 | 74 | 2 | 72 | 557 | 68 | 552 | 2.8e-238 | 825.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063115.t1 | A0A2K3NYV3 | 86.5 | 542 | 59 | 6 | 1 | 537 | 1 | 533 | 9.7e-256 | 892.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene063115 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene063115 | 0.891596 | 3.44E-74 | -1.69E-46 |
| MS.gene049217 | MS.gene063115 | 0.847945 | 8.39E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene063115 | 0.874626 | 5.83E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene063115 | 0.823026 | 1.73E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene063115 | 0.875328 | 3.36E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene063115 | 0.859108 | 5.19E-63 | -1.69E-46 |
| MS.gene049373 | MS.gene063115 | 0.808368 | 3.21E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene063115 | 0.848985 | 4.32E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene063115 | 0.87474 | 5.33E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene063115 | 0.814047 | 1.88E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene063115 | 0.844372 | 7.88E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene063115 | 0.823778 | 1.15E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene063115 | 0.820036 | 8.48E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene063115 | 0.895065 | 1.37E-75 | -1.69E-46 |
| MS.gene050323 | MS.gene063115 | 0.877158 | 7.86E-69 | -1.69E-46 |
| MS.gene050444 | MS.gene063115 | 0.853921 | 1.74E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene063115 | 0.877097 | 8.26E-69 | -1.69E-46 |
| MS.gene050504 | MS.gene063115 | 0.870893 | 1.03E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene063115 | 0.834873 | 2.33E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene063115 | 0.84043 | 8.74E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene063115 | 0.884072 | 2.62E-71 | -1.69E-46 |
| MS.gene050593 | MS.gene063115 | 0.829291 | 5.59E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene063115 | 0.871841 | 5.03E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene063115 | 0.863725 | 2.03E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene063115 | 0.877796 | 4.71E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene063115 | 0.858336 | 8.84E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene063115 | 0.859339 | 4.43E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene063115 | 0.860524 | 1.94E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene063115 | 0.865737 | 4.75E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene063115 | 0.890974 | 6.06E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene063115 | 0.891348 | 4.31E-74 | -1.69E-46 |
| MS.gene050875 | MS.gene063115 | -0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene063115 | 0.855165 | 7.58E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene063115 | 0.854139 | 1.50E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene063115 | 0.856333 | 3.45E-62 | -1.69E-46 |
| MS.gene051167 | MS.gene063115 | -0.802288 | 6.03E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene063115 | 0.832508 | 9.08E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene063115 | 0.872885 | 2.25E-67 | -1.69E-46 |
| MS.gene051439 | MS.gene063115 | -0.805188 | 1.51E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene063115 | 0.83201 | 1.21E-55 | -1.69E-46 |
| MS.gene051651 | MS.gene063115 | -0.814977 | 1.17E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene063115 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene063115 | 0.814926 | 1.20E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene063115 | 0.825451 | 4.65E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene063115 | 0.898271 | 6.25E-77 | -1.69E-46 |
| MS.gene051858 | MS.gene063115 | 0.816556 | 5.20E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene063115 | 0.814756 | 1.31E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene063115 | 0.838446 | 2.86E-57 | -1.69E-46 |
| MS.gene052129 | MS.gene063115 | -0.814184 | 1.75E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene063115 | 0.860362 | 2.18E-63 | -1.69E-46 |
| MS.gene052318 | MS.gene063115 | 0.82445 | 8.02E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene063115 | 0.839556 | 1.48E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene063115 | 0.844192 | 8.80E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene063115 | 0.835386 | 1.73E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene063115 | 0.905028 | 6.61E-80 | -1.69E-46 |
| MS.gene052504 | MS.gene063115 | 0.823285 | 1.50E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene063115 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene063115 | 0.864643 | 1.05E-64 | -1.69E-46 |
| MS.gene052615 | MS.gene063115 | 0.844488 | 7.33E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene063115 | 0.823185 | 1.59E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene063115 | 0.865293 | 6.56E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene063115 | 0.903058 | 5.13E-79 | -1.69E-46 |
| MS.gene052825 | MS.gene063115 | 0.907036 | 7.81E-81 | -1.69E-46 |
| MS.gene052870 | MS.gene063115 | 0.847007 | 1.52E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene063115 | 0.863748 | 2.00E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene063115 | 0.859154 | 5.03E-63 | -1.69E-46 |
| MS.gene053117 | MS.gene063115 | 0.808266 | 3.37E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene063115 | 0.887199 | 1.76E-72 | -1.69E-46 |
| MS.gene053207 | MS.gene063115 | 0.847816 | 9.10E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene063115 | 0.840973 | 6.30E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene063115 | 0.842108 | 3.16E-58 | -1.69E-46 |
| MS.gene053421 | MS.gene063115 | -0.806709 | 7.21E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene063115 | 0.838735 | 2.41E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene063115 | 0.882826 | 7.52E-71 | -1.69E-46 |
| MS.gene053480 | MS.gene063115 | 0.896301 | 4.21E-76 | -1.69E-46 |
| MS.gene053574 | MS.gene063115 | 0.841947 | 3.49E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene063115 | 0.821848 | 3.25E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene063115 | 0.874228 | 7.95E-68 | -1.69E-46 |
| MS.gene053633 | MS.gene063115 | 0.806885 | 6.62E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene063115 | 0.909801 | 3.81E-82 | -1.69E-46 |
| MS.gene053916 | MS.gene063115 | 0.834448 | 2.98E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene063115 | 0.828427 | 9.05E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene063115 | 0.806803 | 6.89E-50 | -1.69E-46 |
| MS.gene054344 | MS.gene063115 | 0.87636 | 1.49E-68 | -1.69E-46 |
| MS.gene054408 | MS.gene063115 | 0.819941 | 8.91E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene063115 | 0.861267 | 1.16E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene063115 | 0.870843 | 1.07E-66 | -1.69E-46 |
| MS.gene054633 | MS.gene063115 | -0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene063115 | 0.846473 | 2.12E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene063115 | -0.851884 | 6.64E-61 | -1.69E-46 |
| MS.gene05470 | MS.gene063115 | 0.873248 | 1.70E-67 | -1.69E-46 |
| MS.gene054884 | MS.gene063115 | -0.832491 | 9.17E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene063115 | 0.825638 | 4.20E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene063115 | 0.836911 | 7.09E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene063115 | 0.872018 | 4.39E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene063115 | 0.857893 | 1.20E-62 | -1.69E-46 |
| MS.gene055224 | MS.gene063115 | 0.834299 | 3.25E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene063115 | 0.825726 | 4.01E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene063115 | 0.866424 | 2.88E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene063115 | 0.888211 | 7.22E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene063115 | 0.905394 | 4.50E-80 | -1.69E-46 |
| MS.gene055722 | MS.gene063115 | 0.820644 | 6.15E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene063115 | 0.85611 | 4.02E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene063115 | 0.857198 | 1.92E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene063115 | 0.854746 | 1.00E-61 | -1.69E-46 |
| MS.gene055776 | MS.gene063115 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene063115 | 0.884532 | 1.77E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene063115 | 0.872664 | 2.67E-67 | -1.69E-46 |
| MS.gene056046 | MS.gene063115 | 0.841375 | 4.94E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene063115 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene063115 | 0.808297 | 3.32E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene063115 | 0.868943 | 4.48E-66 | -1.69E-46 |
| MS.gene056446 | MS.gene063115 | 0.819106 | 1.38E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene063115 | 0.887588 | 1.25E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene063115 | 0.887058 | 1.99E-72 | -1.69E-46 |
| MS.gene056610 | MS.gene063115 | 0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene056618 | MS.gene063115 | -0.802959 | 4.38E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene063115 | 0.865405 | 6.05E-65 | -1.69E-46 |
| MS.gene056692 | MS.gene063115 | 0.844348 | 7.99E-59 | -1.69E-46 |
| MS.gene056694 | MS.gene063115 | -0.805832 | 1.10E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene063115 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene063115 | 0.817934 | 2.55E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene063115 | 0.862314 | 5.53E-64 | -1.69E-46 |
| MS.gene057086 | MS.gene063115 | 0.815172 | 1.06E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene063115 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene063115 | 0.845124 | 4.94E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene063115 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene063115 | 0.879933 | 8.31E-70 | -1.69E-46 |
| MS.gene057734 | MS.gene063115 | 0.815463 | 9.13E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene063115 | 0.857244 | 1.86E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene063115 | 0.853893 | 1.77E-61 | -1.69E-46 |
| MS.gene057857 | MS.gene063115 | 0.859866 | 3.08E-63 | -1.69E-46 |
| MS.gene05787 | MS.gene063115 | 0.840066 | 1.09E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene063115 | 0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene063115 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene063115 | 0.824866 | 6.40E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene063115 | -0.835565 | 1.56E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene063115 | 0.857405 | 1.67E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene063115 | 0.875508 | 2.92E-68 | -1.69E-46 |
| MS.gene058382 | MS.gene063115 | -0.828845 | 7.17E-55 | -1.69E-46 |
| MS.gene058418 | MS.gene063115 | -0.820611 | 6.26E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene063115 | 0.878627 | 2.41E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene063115 | 0.871294 | 7.62E-67 | -1.69E-46 |
| MS.gene058723 | MS.gene063115 | 0.81996 | 8.82E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene063115 | 0.839781 | 1.29E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene063115 | 0.874993 | 4.37E-68 | -1.69E-46 |
| MS.gene058853 | MS.gene063115 | -0.808055 | 3.74E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene063115 | 0.861418 | 1.04E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene063115 | 0.920109 | 1.94E-87 | -1.69E-46 |
| MS.gene05913 | MS.gene063115 | 0.818014 | 2.45E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene063115 | 0.850987 | 1.19E-60 | -1.69E-46 |
| MS.gene05926 | MS.gene063115 | -0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene063115 | 0.835038 | 2.12E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene063115 | 0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene063115 | 0.82944 | 5.14E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene063115 | 0.871546 | 6.29E-67 | -1.69E-46 |
| MS.gene059699 | MS.gene063115 | -0.832887 | 7.31E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene063115 | -0.834224 | 3.39E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene063115 | 0.863974 | 1.70E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene063115 | 0.854376 | 1.28E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene063115 | 0.805507 | 1.29E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene063115 | 0.817599 | 3.03E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene063115 | 0.868016 | 8.93E-66 | -1.69E-46 |
| MS.gene059902 | MS.gene063115 | 0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene063115 | 0.877484 | 6.06E-69 | -1.69E-46 |
| MS.gene06027 | MS.gene063115 | 0.829628 | 4.63E-55 | -1.69E-46 |
| MS.gene060405 | MS.gene063115 | -0.801072 | 1.07E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene063115 | 0.843151 | 1.67E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene063115 | 0.864937 | 8.49E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene063115 | 0.85266 | 3.99E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene063115 | 0.870101 | 1.88E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene063115 | 0.840023 | 1.12E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene063115 | 0.865621 | 5.17E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene063115 | 0.892109 | 2.15E-74 | -1.69E-46 |
| MS.gene061044 | MS.gene063115 | -0.809655 | 1.70E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene063115 | 0.840722 | 7.33E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063115.t1 | MTR_4g072110 | 78.863 | 563 | 97 | 7 | 1 | 558 | 1 | 546 | 0.0 | 871 |
| MS.gene063115.t1 | MTR_3g117590 | 87.255 | 408 | 21 | 2 | 139 | 546 | 27 | 403 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063115.t1 | AT4G34740 | 84.016 | 488 | 75 | 2 | 72 | 558 | 68 | 553 | 0.0 | 844 |
| MS.gene063115.t1 | AT2G16570 | 84.583 | 480 | 73 | 1 | 79 | 558 | 80 | 558 | 0.0 | 839 |
| MS.gene063115.t1 | AT4G38880 | 67.424 | 528 | 159 | 5 | 12 | 537 | 9 | 525 | 0.0 | 718 |
Find 119 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCCAATTCTGTTGTATT+TGG | 0.096765 | 3.3:+95514094 | MS.gene063115:CDS |
| ATTATTGGGTCTTGTTATTA+TGG | 0.169325 | 3.3:+95514493 | MS.gene063115:CDS |
| ATCTTCATCTCTTTCTGATT+TGG | 0.180718 | 3.3:-95514772 | None:intergenic |
| GTTATAGCTGTTCCTGATTC+TGG | 0.192514 | 3.3:+95514190 | MS.gene063115:CDS |
| TCACAGAAGATTAGAGATTT+TGG | 0.203480 | 3.3:+95514310 | MS.gene063115:CDS |
| ATTGCATGTCCACCAATTAT+TGG | 0.249163 | 3.3:+95514478 | MS.gene063115:CDS |
| AAGATTGTTTGGTGAAATAT+TGG | 0.274673 | 3.3:+95514138 | MS.gene063115:CDS |
| GGTTTATCCTGGTGAAATTA+TGG | 0.280156 | 3.3:+95513985 | MS.gene063115:CDS |
| TCAACAATTCTCGCTATAAA+AGG | 0.280350 | 3.3:-95513782 | None:intergenic |
| GATGAGTGTGGCTGAGATTA+AGG | 0.284060 | 3.3:+95514555 | MS.gene063115:CDS |
| GTGAATGGGAATGTGTTGTT+AGG | 0.284914 | 3.3:-95513290 | None:intergenic |
| TCTTCATCTCTTTCTGATTT+GGG | 0.291726 | 3.3:-95514771 | None:intergenic |
| AGAAATGAACTTGAAGAATC+TGG | 0.293200 | 3.3:+95513692 | MS.gene063115:CDS |
| TAATAACAAGACCCAATAAT+TGG | 0.293975 | 3.3:-95514490 | None:intergenic |
| TTTCCCAAATACAACAGAAT+TGG | 0.301159 | 3.3:-95514098 | None:intergenic |
| TAGCAGAGACGAGAGGCTTC+TGG | 0.302805 | 3.3:-95513386 | None:intergenic |
| GCTGAGATTAAGGAATTTAT+TGG | 0.318852 | 3.3:+95514565 | MS.gene063115:CDS |
| CCGGTTCGTGCTGTTCTTGA+AGG | 0.320056 | 3.3:+95514352 | MS.gene063115:CDS |
| TGCCCAATTCTGTTGTATTT+GGG | 0.324405 | 3.3:+95514095 | MS.gene063115:CDS |
| TTCTGTTATGCTTGTTTCAC+TGG | 0.324666 | 3.3:+95514655 | MS.gene063115:CDS |
| TGTGTTGTTAGGGTTGTTAT+TGG | 0.329634 | 3.3:-95513279 | None:intergenic |
| TTGCATGTCCACCAATTATT+GGG | 0.345820 | 3.3:+95514479 | MS.gene063115:CDS |
| AGAATGAGAAGGTGAGGTTT+TGG | 0.352465 | 3.3:-95513231 | None:intergenic |
| CAGAAAGAGATGAAGATTGT+TGG | 0.354775 | 3.3:+95514778 | MS.gene063115:CDS |
| CTGAAGAGTTGATATCTAAT+AGG | 0.367246 | 3.3:+95514533 | MS.gene063115:CDS |
| GTTGCTGTCAGAGATCCTTT+TGG | 0.373947 | 3.3:+95513863 | MS.gene063115:CDS |
| TTTGTTGCAGGTTACCGTTT+TGG | 0.378465 | 3.3:+95513620 | MS.gene063115:CDS |
| TTTAGGTTTGTTGAGGGAAG+AGG | 0.397497 | 3.3:-95513123 | None:intergenic |
| TGACCAATGGCTAAGTTTCC+AGG | 0.397946 | 3.3:-95513548 | None:intergenic |
| TTAAGTTCAGTAGGTTCAAC+AGG | 0.399551 | 3.3:-95514685 | None:intergenic |
| TGGTTTGAAGGACTTTGTTA+TGG | 0.401995 | 3.3:-95513469 | None:intergenic |
| TTCCCAAATACAACAGAATT+GGG | 0.403442 | 3.3:-95514097 | None:intergenic |
| GTGCTGTTCTTGAAGGGAAA+AGG | 0.406661 | 3.3:+95514359 | MS.gene063115:CDS |
| TATGAATCAAGAAGATTGTT+TGG | 0.412509 | 3.3:+95514127 | MS.gene063115:CDS |
| CTAATCAAACCCTGTTGAAA+AGG | 0.417806 | 3.3:-95514253 | None:intergenic |
| TCTGGTGTTGTTGCTGCACT+TGG | 0.419203 | 3.3:+95514208 | MS.gene063115:CDS |
| CGTGAAGAATGTGGCGTTGT+TGG | 0.421219 | 3.3:+95513350 | MS.gene063115:CDS |
| AAAGTCCTTCAAACCATTAC+CGG | 0.424078 | 3.3:+95513476 | MS.gene063115:CDS |
| TGAATGGGAATGTGTTGTTA+GGG | 0.428275 | 3.3:-95513289 | None:intergenic |
| AAGGACTTTGTTATGGTTGA+CGG | 0.431778 | 3.3:-95513462 | None:intergenic |
| AGAGAGTTTAGGTTTGTTGA+GGG | 0.448031 | 3.3:-95513129 | None:intergenic |
| GCAGCAACAACACCAGAATC+AGG | 0.452380 | 3.3:-95514202 | None:intergenic |
| TCCGTTGGTGTTGCTCATAA+TGG | 0.454130 | 3.3:+95513644 | MS.gene063115:CDS |
| CTTAAAGTTAAGAAGAGGAT+TGG | 0.456503 | 3.3:+95514703 | MS.gene063115:CDS |
| ATAACTACATCACAATCAAC+AGG | 0.456568 | 3.3:-95514172 | None:intergenic |
| ATTGGTGGTGATTCTGTGGA+TGG | 0.464638 | 3.3:+95514721 | MS.gene063115:CDS |
| TAGCGGCGATGTTTGTGAAT+GGG | 0.471858 | 3.3:-95513304 | None:intergenic |
| TGCTGTTCTTGAAGGGAAAA+GGG | 0.475172 | 3.3:+95514360 | MS.gene063115:CDS |
| AACGAGGCCAACGCCGGTAA+TGG | 0.479513 | 3.3:-95513489 | None:intergenic |
| ACAAAACTCCGTCAATTACC+TGG | 0.480200 | 3.3:+95513530 | MS.gene063115:CDS |
| GGATAGTTTGAAGAAGTTGT+TGG | 0.482382 | 3.3:+95514615 | MS.gene063115:CDS |
| TCCTGGTGAAATTATGGTTG+TGG | 0.482820 | 3.3:+95513991 | MS.gene063115:CDS |
| CTTGGTTATGCTGCAAAAGC+TGG | 0.485841 | 3.3:+95514226 | MS.gene063115:CDS |
| TCTGTGGATGGTGGATTGAA+TGG | 0.487961 | 3.3:+95514733 | MS.gene063115:CDS |
| GTTGAGGGAAGAGGAAGAGA+GGG | 0.493244 | 3.3:-95513114 | None:intergenic |
| CCTTCAAGAACAGCACGAAC+CGG | 0.494340 | 3.3:-95514352 | None:intergenic |
| TTCTTCAAGTTCATTTCTCA+AGG | 0.496817 | 3.3:-95513687 | None:intergenic |
| AAGAGAGTTTAGGTTTGTTG+AGG | 0.497209 | 3.3:-95513130 | None:intergenic |
| GATAGTTTGAAGAAGTTGTT+GGG | 0.498781 | 3.3:+95514616 | MS.gene063115:CDS |
| TGTTGAGGGAAGAGGAAGAG+AGG | 0.501159 | 3.3:-95513115 | None:intergenic |
| GATATCAACTCTTCAGAGCT+AGG | 0.501424 | 3.3:-95514526 | None:intergenic |
| GGTGGTGATTCTGTGGATGG+TGG | 0.506017 | 3.3:+95514724 | MS.gene063115:CDS |
| TTCTTAACTTTAAGTTCAGT+AGG | 0.508401 | 3.3:-95514694 | None:intergenic |
| AACAAGTGTTGGCGGTTGAA+TGG | 0.508842 | 3.3:-95513172 | None:intergenic |
| CGGTTCGTGCTGTTCTTGAA+GGG | 0.509292 | 3.3:+95514353 | MS.gene063115:CDS |
| CTAAGTTTCCAGGTAATTGA+CGG | 0.513521 | 3.3:-95513538 | None:intergenic |
| AAACGGTAACCTGCAACAAA+AGG | 0.514148 | 3.3:-95513617 | None:intergenic |
| TCTGTTATGCTTGTTTCACT+GGG | 0.514410 | 3.3:+95514656 | MS.gene063115:CDS |
| TGTGGCGTTGTTGGTATCTA+CGG | 0.518381 | 3.3:+95513359 | MS.gene063115:CDS |
| CAAGTTCATTTCTCAAGGAA+CGG | 0.518679 | 3.3:-95513682 | None:intergenic |
| TTCGTCGTGGTCATCATTAG+CGG | 0.521295 | 3.3:-95513321 | None:intergenic |
| CATGTCCGTTATTCAACTGC+AGG | 0.521534 | 3.3:+95513569 | MS.gene063115:CDS |
| TATGAAAGAGAGGTTTATCC+TGG | 0.522853 | 3.3:+95513974 | MS.gene063115:CDS |
| TTAGCGGCGATGTTTGTGAA+TGG | 0.523421 | 3.3:-95513305 | None:intergenic |
| TTACCTGGAAACTTAGCCAT+TGG | 0.524484 | 3.3:+95513545 | MS.gene063115:CDS |
| ACCAAAGGTCGAAAACCAAA+AGG | 0.526636 | 3.3:-95513878 | None:intergenic |
| CAACGCCGGTAATGGTTTGA+AGG | 0.528133 | 3.3:-95513481 | None:intergenic |
| CTTCAAACCATTACCGGCGT+TGG | 0.528503 | 3.3:+95513482 | MS.gene063115:CDS |
| GGCGGTTGAATGGTTGAAAG+AGG | 0.533941 | 3.3:-95513162 | None:intergenic |
| TGGGTCTTGTTATTATGGTG+TGG | 0.544696 | 3.3:+95514498 | MS.gene063115:CDS |
| AAAGTTAAGAAGAGGATTGG+TGG | 0.549648 | 3.3:+95514706 | MS.gene063115:CDS |
| TCTTGAAGGGAAAAGGGTTG+TGG | 0.550569 | 3.3:+95514366 | MS.gene063115:CDS |
| GTGAGGTTGTTAAAAGAAGC+TGG | 0.552217 | 3.3:+95514433 | MS.gene063115:CDS |
| CTTCTTCTTCCCATAACCAA+AGG | 0.554261 | 3.3:-95513893 | None:intergenic |
| CTGAACTTAAAGTTAAGAAG+AGG | 0.556144 | 3.3:+95514698 | MS.gene063115:CDS |
| CAACACCAACGGAACCAAAA+CGG | 0.557562 | 3.3:-95513634 | None:intergenic |
| GTTGTAAGAATGAGAAGGTG+AGG | 0.561350 | 3.3:-95513237 | None:intergenic |
| ATTGGCCTGCAGTTGAATAA+CGG | 0.563701 | 3.3:-95513574 | None:intergenic |
| AAATCTCTAATCTTCTGTGA+TGG | 0.569057 | 3.3:-95514307 | None:intergenic |
| TAACAAGACCCAATAATTGG+TGG | 0.569913 | 3.3:-95514487 | None:intergenic |
| TGTGAAGTTGAAGCTTTCAC+CGG | 0.573769 | 3.3:+95514333 | MS.gene063115:CDS |
| CGAAGCTACTTATGAAAGAG+AGG | 0.573913 | 3.3:+95513964 | MS.gene063115:CDS |
| TCCACAACCATAATTTCACC+AGG | 0.575009 | 3.3:-95513992 | None:intergenic |
| GAGGATTGGTGGTGATTCTG+TGG | 0.576985 | 3.3:+95514717 | MS.gene063115:CDS |
| CACCGTGGTCAAGAAGGTGC+TGG | 0.578090 | 3.3:+95513431 | MS.gene063115:CDS |
| CGTTGAAAACTTCGGAAACG+AGG | 0.581432 | 3.3:-95513505 | None:intergenic |
| TGTTGATGATTCAATTGTGA+GGG | 0.584102 | 3.3:+95514390 | MS.gene063115:CDS |
| CTTCAACACCGTGGTCAAGA+AGG | 0.588529 | 3.3:+95513425 | MS.gene063115:CDS |
| GTTATGGGAAGAAGAAGTAA+CGG | 0.598346 | 3.3:+95513899 | MS.gene063115:CDS |
| TTGATTAGGTCACACTATGT+TGG | 0.599304 | 3.3:+95514268 | MS.gene063115:CDS |
| TTGTTGATGATTCAATTGTG+AGG | 0.602266 | 3.3:+95514389 | MS.gene063115:CDS |
| TTCGGAAACGAGGCCAACGC+CGG | 0.614737 | 3.3:-95513495 | None:intergenic |
| GAAAAGCCTCGTGAAGAATG+TGG | 0.614821 | 3.3:+95513341 | MS.gene063115:CDS |
| ATTATGGTTGTGGATAAAAG+TGG | 0.619860 | 3.3:+95514001 | MS.gene063115:CDS |
| TTGTAGTTGTAAGAATGAGA+AGG | 0.631544 | 3.3:-95513242 | None:intergenic |
| ACCATTATGAGCAACACCAA+CGG | 0.634502 | 3.3:-95513645 | None:intergenic |
| GTTGAAGTGCATGGAGAGCG+AGG | 0.641710 | 3.3:-95513409 | None:intergenic |
| CTACATCATCTAAAATTGTG+AGG | 0.646524 | 3.3:+95514416 | MS.gene063115:CDS |
| TGAATAACGGACATGACCAA+TGG | 0.652687 | 3.3:-95513561 | None:intergenic |
| GGATGGTGGATTGAATGGAT+CGG | 0.653459 | 3.3:+95514738 | MS.gene063115:CDS |
| AACTTCTTCAAACTATCCAT+AGG | 0.662605 | 3.3:-95514610 | None:intergenic |
| GTTGATGATTCAATTGTGAG+GGG | 0.670952 | 3.3:+95514391 | MS.gene063115:CDS |
| AGCGAGGTAGCAGAGACGAG+AGG | 0.672004 | 3.3:-95513393 | None:intergenic |
| TACCAGCACCTTCTTGACCA+CGG | 0.675912 | 3.3:-95513433 | None:intergenic |
| GTGCTAAAGAAGTTCACATG+AGG | 0.680748 | 3.3:+95514455 | MS.gene063115:CDS |
| ACAACGCCACATTCTTCACG+AGG | 0.684608 | 3.3:-95513347 | None:intergenic |
| GACCACGGTGTTGAAGTGCA+TGG | 0.689058 | 3.3:-95513418 | None:intergenic |
| GATATCTAATAGGATGAGTG+TGG | 0.701334 | 3.3:+95514543 | MS.gene063115:CDS |
| CTCCATGCACTTCAACACCG+TGG | 0.731810 | 3.3:+95513416 | MS.gene063115:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTCAAAAATACATTGTTT+TGG | - | chr3.3:95514061-95514080 | None:intergenic | 20.0% |
| ! | TAATAACAAGACCCAATAAT+TGG | - | chr3.3:95514493-95514512 | None:intergenic | 25.0% |
| ! | TATGAATCAAGAAGATTGTT+TGG | + | chr3.3:95514127-95514146 | MS.gene063115:CDS | 25.0% |
| !! | AAGATTGTTTGGTGAAATAT+TGG | + | chr3.3:95514138-95514157 | MS.gene063115:CDS | 25.0% |
| !! | TTCTTAACTTTAAGTTCAGT+AGG | - | chr3.3:95514697-95514716 | None:intergenic | 25.0% |
| !!! | AAAATACATTGTTTTGGTTC+TGG | - | chr3.3:95514055-95514074 | None:intergenic | 25.0% |
| !!! | ATTATTGGGTCTTGTTATTA+TGG | + | chr3.3:95514493-95514512 | MS.gene063115:CDS | 25.0% |
| AAATCTCTAATCTTCTGTGA+TGG | - | chr3.3:95514310-95514329 | None:intergenic | 30.0% | |
| AACTTCTTCAAACTATCCAT+AGG | - | chr3.3:95514613-95514632 | None:intergenic | 30.0% | |
| AGAAATGAACTTGAAGAATC+TGG | + | chr3.3:95513692-95513711 | MS.gene063115:CDS | 30.0% | |
| ATAACTACATCACAATCAAC+AGG | - | chr3.3:95514175-95514194 | None:intergenic | 30.0% | |
| ATCTTCATCTCTTTCTGATT+TGG | - | chr3.3:95514775-95514794 | None:intergenic | 30.0% | |
| ATTATGGTTGTGGATAAAAG+TGG | + | chr3.3:95514001-95514020 | MS.gene063115:CDS | 30.0% | |
| CTGAACTTAAAGTTAAGAAG+AGG | + | chr3.3:95514698-95514717 | MS.gene063115:CDS | 30.0% | |
| CTTAAAGTTAAGAAGAGGAT+TGG | + | chr3.3:95514703-95514722 | MS.gene063115:CDS | 30.0% | |
| GAAGAAGAAAAAGAGAGTTT+AGG | - | chr3.3:95513143-95513162 | None:intergenic | 30.0% | |
| GATAGTTTGAAGAAGTTGTT+GGG | + | chr3.3:95514616-95514635 | MS.gene063115:CDS | 30.0% | |
| GCTGAGATTAAGGAATTTAT+TGG | + | chr3.3:95514565-95514584 | MS.gene063115:CDS | 30.0% | |
| TCAACAATTCTCGCTATAAA+AGG | - | chr3.3:95513785-95513804 | None:intergenic | 30.0% | |
| TCTTCATCTCTTTCTGATTT+GGG | - | chr3.3:95514774-95514793 | None:intergenic | 30.0% | |
| TTCCCAAATACAACAGAATT+GGG | - | chr3.3:95514100-95514119 | None:intergenic | 30.0% | |
| TTGTAGTTGTAAGAATGAGA+AGG | - | chr3.3:95513245-95513264 | None:intergenic | 30.0% | |
| TTTCCCAAATACAACAGAAT+TGG | - | chr3.3:95514101-95514120 | None:intergenic | 30.0% | |
| ! | CTACATCATCTAAAATTGTG+AGG | + | chr3.3:95514416-95514435 | MS.gene063115:CDS | 30.0% |
| ! | TCACAGAAGATTAGAGATTT+TGG | + | chr3.3:95514310-95514329 | MS.gene063115:CDS | 30.0% |
| ! | TTCTTCAAGTTCATTTCTCA+AGG | - | chr3.3:95513690-95513709 | None:intergenic | 30.0% |
| !! | CTGAAGAGTTGATATCTAAT+AGG | + | chr3.3:95514533-95514552 | MS.gene063115:CDS | 30.0% |
| !! | TGTTGATGATTCAATTGTGA+GGG | + | chr3.3:95514390-95514409 | MS.gene063115:CDS | 30.0% |
| !! | TTGTTGATGATTCAATTGTG+AGG | + | chr3.3:95514389-95514408 | MS.gene063115:CDS | 30.0% |
| !! | TTTTGTGTCGTTGAAAACTT+CGG | - | chr3.3:95513516-95513535 | None:intergenic | 30.0% |
| AAAGTCCTTCAAACCATTAC+CGG | + | chr3.3:95513476-95513495 | MS.gene063115:CDS | 35.0% | |
| AAAGTTAAGAAGAGGATTGG+TGG | + | chr3.3:95514706-95514725 | MS.gene063115:CDS | 35.0% | |
| ATTGCATGTCCACCAATTAT+TGG | + | chr3.3:95514478-95514497 | MS.gene063115:CDS | 35.0% | |
| CAAGTTCATTTCTCAAGGAA+CGG | - | chr3.3:95513685-95513704 | None:intergenic | 35.0% | |
| CAGAAAGAGATGAAGATTGT+TGG | + | chr3.3:95514778-95514797 | MS.gene063115:CDS | 35.0% | |
| CTAAGTTTCCAGGTAATTGA+CGG | - | chr3.3:95513541-95513560 | None:intergenic | 35.0% | |
| CTAATCAAACCCTGTTGAAA+AGG | - | chr3.3:95514256-95514275 | None:intergenic | 35.0% | |
| GAAGCGTGTGAAAAAGTTAA+AGG | + | chr3.3:95513803-95513822 | MS.gene063115:CDS | 35.0% | |
| GATATCTAATAGGATGAGTG+TGG | + | chr3.3:95514543-95514562 | MS.gene063115:CDS | 35.0% | |
| GGATAGTTTGAAGAAGTTGT+TGG | + | chr3.3:95514615-95514634 | MS.gene063115:CDS | 35.0% | |
| GGTTTATCCTGGTGAAATTA+TGG | + | chr3.3:95513985-95514004 | MS.gene063115:CDS | 35.0% | |
| GTTATGGGAAGAAGAAGTAA+CGG | + | chr3.3:95513899-95513918 | MS.gene063115:CDS | 35.0% | |
| GTTGTGGAAAAAACAAGTGT+TGG | - | chr3.3:95513186-95513205 | None:intergenic | 35.0% | |
| TAACAAGACCCAATAATTGG+TGG | - | chr3.3:95514490-95514509 | None:intergenic | 35.0% | |
| TATGAAAGAGAGGTTTATCC+TGG | + | chr3.3:95513974-95513993 | MS.gene063115:CDS | 35.0% | |
| TCTGTTATGCTTGTTTCACT+GGG | + | chr3.3:95514656-95514675 | MS.gene063115:CDS | 35.0% | |
| TGCCCAATTCTGTTGTATTT+GGG | + | chr3.3:95514095-95514114 | MS.gene063115:CDS | 35.0% | |
| TGGTTTGAAGGACTTTGTTA+TGG | - | chr3.3:95513472-95513491 | None:intergenic | 35.0% | |
| TTAAGTTCAGTAGGTTCAAC+AGG | - | chr3.3:95514688-95514707 | None:intergenic | 35.0% | |
| TTCTGTTATGCTTGTTTCAC+TGG | + | chr3.3:95514655-95514674 | MS.gene063115:CDS | 35.0% | |
| TTGATTAGGTCACACTATGT+TGG | + | chr3.3:95514268-95514287 | MS.gene063115:CDS | 35.0% | |
| TTGCATGTCCACCAATTATT+GGG | + | chr3.3:95514479-95514498 | MS.gene063115:CDS | 35.0% | |
| TTGCCCAATTCTGTTGTATT+TGG | + | chr3.3:95514094-95514113 | MS.gene063115:CDS | 35.0% | |
| ! | AAGGACTTTGTTATGGTTGA+CGG | - | chr3.3:95513465-95513484 | None:intergenic | 35.0% |
| ! | CTTTTCAACAGGGTTTGATT+AGG | + | chr3.3:95514254-95514273 | MS.gene063115:CDS | 35.0% |
| ! | TGAATGGGAATGTGTTGTTA+GGG | - | chr3.3:95513292-95513311 | None:intergenic | 35.0% |
| ! | TGTGTTGTTAGGGTTGTTAT+TGG | - | chr3.3:95513282-95513301 | None:intergenic | 35.0% |
| !! | AAGAGAGTTTAGGTTTGTTG+AGG | - | chr3.3:95513133-95513152 | None:intergenic | 35.0% |
| !! | AGAGAGTTTAGGTTTGTTGA+GGG | - | chr3.3:95513132-95513151 | None:intergenic | 35.0% |
| !! | GTTGATGATTCAATTGTGAG+GGG | + | chr3.3:95514391-95514410 | MS.gene063115:CDS | 35.0% |
| !! | TTCACTTGCTTTTCTACCTA+TGG | + | chr3.3:95514594-95514613 | MS.gene063115:CDS | 35.0% |
| !!! | TTGAGAGAAGAGTTTTGTTG+TGG | - | chr3.3:95513202-95513221 | None:intergenic | 35.0% |
| AAACGGTAACCTGCAACAAA+AGG | - | chr3.3:95513620-95513639 | None:intergenic | 40.0% | |
| ACAAAACTCCGTCAATTACC+TGG | + | chr3.3:95513530-95513549 | MS.gene063115:CDS | 40.0% | |
| ACCAAAGGTCGAAAACCAAA+AGG | - | chr3.3:95513881-95513900 | None:intergenic | 40.0% | |
| ACCATTATGAGCAACACCAA+CGG | - | chr3.3:95513648-95513667 | None:intergenic | 40.0% | |
| CGAAGCTACTTATGAAAGAG+AGG | + | chr3.3:95513964-95513983 | MS.gene063115:CDS | 40.0% | |
| CTTCTTCTTCCCATAACCAA+AGG | - | chr3.3:95513896-95513915 | None:intergenic | 40.0% | |
| GATATCAACTCTTCAGAGCT+AGG | - | chr3.3:95514529-95514548 | None:intergenic | 40.0% | |
| GTGAGGTTGTTAAAAGAAGC+TGG | + | chr3.3:95514433-95514452 | MS.gene063115:CDS | 40.0% | |
| GTGCTAAAGAAGTTCACATG+AGG | + | chr3.3:95514455-95514474 | MS.gene063115:CDS | 40.0% | |
| GTTATAGCTGTTCCTGATTC+TGG | + | chr3.3:95514190-95514209 | MS.gene063115:CDS | 40.0% | |
| GTTGTAAGAATGAGAAGGTG+AGG | - | chr3.3:95513240-95513259 | None:intergenic | 40.0% | |
| TCCACAACCATAATTTCACC+AGG | - | chr3.3:95513995-95514014 | None:intergenic | 40.0% | |
| TCCTGGTGAAATTATGGTTG+TGG | + | chr3.3:95513991-95514010 | MS.gene063115:CDS | 40.0% | |
| TGCTGTTCTTGAAGGGAAAA+GGG | + | chr3.3:95514360-95514379 | MS.gene063115:CDS | 40.0% | |
| TGTGAAGTTGAAGCTTTCAC+CGG | + | chr3.3:95514333-95514352 | MS.gene063115:CDS | 40.0% | |
| TTACCTGGAAACTTAGCCAT+TGG | + | chr3.3:95513545-95513564 | MS.gene063115:CDS | 40.0% | |
| ! | AACGTTCAACCTTTTGTTGC+AGG | + | chr3.3:95513608-95513627 | MS.gene063115:CDS | 40.0% |
| ! | AATGAGAAGGTGAGGTTTTG+GGG | - | chr3.3:95513232-95513251 | None:intergenic | 40.0% |
| ! | AGAATGAGAAGGTGAGGTTT+TGG | - | chr3.3:95513234-95513253 | None:intergenic | 40.0% |
| ! | ATTGGCCTGCAGTTGAATAA+CGG | - | chr3.3:95513577-95513596 | None:intergenic | 40.0% |
| ! | GAATGAGAAGGTGAGGTTTT+GGG | - | chr3.3:95513233-95513252 | None:intergenic | 40.0% |
| ! | GGTTTTCGACCTTTGGTTAT+GGG | + | chr3.3:95513884-95513903 | MS.gene063115:CDS | 40.0% |
| ! | GTGAATGGGAATGTGTTGTT+AGG | - | chr3.3:95513293-95513312 | None:intergenic | 40.0% |
| ! | TGGTTTTCGACCTTTGGTTA+TGG | + | chr3.3:95513883-95513902 | MS.gene063115:CDS | 40.0% |
| ! | TTTGTTGCAGGTTACCGTTT+TGG | + | chr3.3:95513620-95513639 | MS.gene063115:CDS | 40.0% |
| !! | AGGTTGAACGTTTTTGAGCA+TGG | - | chr3.3:95513600-95513619 | None:intergenic | 40.0% |
| !! | GAACGTTTTTGAGCATGGAT+TGG | - | chr3.3:95513595-95513614 | None:intergenic | 40.0% |
| !! | GTGGAAAAAACAAGTGTTGG+CGG | - | chr3.3:95513183-95513202 | None:intergenic | 40.0% |
| !! | TGAATAACGGACATGACCAA+TGG | - | chr3.3:95513564-95513583 | None:intergenic | 40.0% |
| !! | TGGGTCTTGTTATTATGGTG+TGG | + | chr3.3:95514498-95514517 | MS.gene063115:CDS | 40.0% |
| !! | TTTAGGTTTGTTGAGGGAAG+AGG | - | chr3.3:95513126-95513145 | None:intergenic | 40.0% |
| !!! | CGGTTCTGTTGTTTTTGCTT+CGG | + | chr3.3:95513919-95513938 | MS.gene063115:CDS | 40.0% |
| !!! | TCCTTTTGGTTTTCGACCTT+TGG | + | chr3.3:95513877-95513896 | MS.gene063115:CDS | 40.0% |
| CAACACCAACGGAACCAAAA+CGG | - | chr3.3:95513637-95513656 | None:intergenic | 45.0% | |
| CATGTCCGTTATTCAACTGC+AGG | + | chr3.3:95513569-95513588 | MS.gene063115:CDS | 45.0% | |
| CGTTGAAAACTTCGGAAACG+AGG | - | chr3.3:95513508-95513527 | None:intergenic | 45.0% | |
| CTTGGTTATGCTGCAAAAGC+TGG | + | chr3.3:95514226-95514245 | MS.gene063115:CDS | 45.0% | |
| GAAAAGCCTCGTGAAGAATG+TGG | + | chr3.3:95513341-95513360 | MS.gene063115:CDS | 45.0% | |
| GATGAGTGTGGCTGAGATTA+AGG | + | chr3.3:95514555-95514574 | MS.gene063115:CDS | 45.0% | |
| TAGCGGCGATGTTTGTGAAT+GGG | - | chr3.3:95513307-95513326 | None:intergenic | 45.0% | |
| TCTTGAAGGGAAAAGGGTTG+TGG | + | chr3.3:95514366-95514385 | MS.gene063115:CDS | 45.0% | |
| TGACCAATGGCTAAGTTTCC+AGG | - | chr3.3:95513551-95513570 | None:intergenic | 45.0% | |
| TGTGGCGTTGTTGGTATCTA+CGG | + | chr3.3:95513359-95513378 | MS.gene063115:CDS | 45.0% | |
| TTAGCGGCGATGTTTGTGAA+TGG | - | chr3.3:95513308-95513327 | None:intergenic | 45.0% | |
| TTCGTCGTGGTCATCATTAG+CGG | - | chr3.3:95513324-95513343 | None:intergenic | 45.0% | |
| ! | AGCTGGTGTTCCTTTTCAAC+AGG | + | chr3.3:95514243-95514262 | MS.gene063115:CDS | 45.0% |
| ! | GCTGGTGTTCCTTTTCAACA+GGG | + | chr3.3:95514244-95514263 | MS.gene063115:CDS | 45.0% |
| ! | GTGCTGTTCTTGAAGGGAAA+AGG | + | chr3.3:95514359-95514378 | MS.gene063115:CDS | 45.0% |
| ! | GTTGCTGTCAGAGATCCTTT+TGG | + | chr3.3:95513863-95513882 | MS.gene063115:CDS | 45.0% |
| !! | AACAAGTGTTGGCGGTTGAA+TGG | - | chr3.3:95513175-95513194 | None:intergenic | 45.0% |
| !! | ATTGGTGGTGATTCTGTGGA+TGG | + | chr3.3:95514721-95514740 | MS.gene063115:CDS | 45.0% |
| !! | GGATGGTGGATTGAATGGAT+CGG | + | chr3.3:95514738-95514757 | MS.gene063115:CDS | 45.0% |
| !! | TCCGTTGGTGTTGCTCATAA+TGG | + | chr3.3:95513644-95513663 | MS.gene063115:CDS | 45.0% |
| !! | TCTGTGGATGGTGGATTGAA+TGG | + | chr3.3:95514733-95514752 | MS.gene063115:CDS | 45.0% |
| ACAACGCCACATTCTTCACG+AGG | - | chr3.3:95513350-95513369 | None:intergenic | 50.0% | |
| CCTTCAAGAACAGCACGAAC+CGG | - | chr3.3:95514355-95514374 | None:intergenic | 50.0% | |
| CGTGAAGAATGTGGCGTTGT+TGG | + | chr3.3:95513350-95513369 | MS.gene063115:CDS | 50.0% | |
| CTTCAAACCATTACCGGCGT+TGG | + | chr3.3:95513482-95513501 | MS.gene063115:CDS | 50.0% | |
| CTTCAACACCGTGGTCAAGA+AGG | + | chr3.3:95513425-95513444 | MS.gene063115:CDS | 50.0% | |
| GCAGCAACAACACCAGAATC+AGG | - | chr3.3:95514205-95514224 | None:intergenic | 50.0% | |
| GGCGGTTGAATGGTTGAAAG+AGG | - | chr3.3:95513165-95513184 | None:intergenic | 50.0% | |
| GTTGAGGGAAGAGGAAGAGA+GGG | - | chr3.3:95513117-95513136 | None:intergenic | 50.0% | |
| TACCAGCACCTTCTTGACCA+CGG | - | chr3.3:95513436-95513455 | None:intergenic | 50.0% | |
| TGTTGAGGGAAGAGGAAGAG+AGG | - | chr3.3:95513118-95513137 | None:intergenic | 50.0% | |
| ! | CAACGCCGGTAATGGTTTGA+AGG | - | chr3.3:95513484-95513503 | None:intergenic | 50.0% |
| ! | CGGTTCGTGCTGTTCTTGAA+GGG | + | chr3.3:95514353-95514372 | MS.gene063115:CDS | 50.0% |
| !! | GAGGATTGGTGGTGATTCTG+TGG | + | chr3.3:95514717-95514736 | MS.gene063115:CDS | 50.0% |
| !! | TCTGGTGTTGTTGCTGCACT+TGG | + | chr3.3:95514208-95514227 | MS.gene063115:CDS | 50.0% |
| !!! | GGTTACCGTTTTGGTTCCGT+TGG | + | chr3.3:95513629-95513648 | MS.gene063115:CDS | 50.0% |
| CTCCATGCACTTCAACACCG+TGG | + | chr3.3:95513416-95513435 | MS.gene063115:CDS | 55.0% | |
| GGTGGTGATTCTGTGGATGG+TGG | + | chr3.3:95514724-95514743 | MS.gene063115:CDS | 55.0% | |
| GTTGAAGTGCATGGAGAGCG+AGG | - | chr3.3:95513412-95513431 | None:intergenic | 55.0% | |
| TAGCAGAGACGAGAGGCTTC+TGG | - | chr3.3:95513389-95513408 | None:intergenic | 55.0% | |
| ! | CCGGTTCGTGCTGTTCTTGA+AGG | + | chr3.3:95514352-95514371 | MS.gene063115:CDS | 55.0% |
| ! | CTTCACGAGGCTTTTCGTCG+TGG | - | chr3.3:95513337-95513356 | None:intergenic | 55.0% |
| ! | GACCACGGTGTTGAAGTGCA+TGG | - | chr3.3:95513421-95513440 | None:intergenic | 55.0% |
| AACGAGGCCAACGCCGGTAA+TGG | - | chr3.3:95513492-95513511 | None:intergenic | 60.0% | |
| AGCGAGGTAGCAGAGACGAG+AGG | - | chr3.3:95513396-95513415 | None:intergenic | 60.0% | |
| TTCGGAAACGAGGCCAACGC+CGG | - | chr3.3:95513498-95513517 | None:intergenic | 60.0% | |
| ! | CACCGTGGTCAAGAAGGTGC+TGG | + | chr3.3:95513431-95513450 | MS.gene063115:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 95513092 | 95514807 | 95513092 | ID=MS.gene063115 |
| chr3.3 | mRNA | 95513092 | 95514807 | 95513092 | ID=MS.gene063115.t1;Parent=MS.gene063115 |
| chr3.3 | exon | 95513092 | 95514807 | 95513092 | ID=MS.gene063115.t1.exon1;Parent=MS.gene063115.t1 |
| chr3.3 | CDS | 95513092 | 95514807 | 95513092 | ID=cds.MS.gene063115.t1;Parent=MS.gene063115.t1 |
| Gene Sequence |
| Protein sequence |
