Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73909.t1 | RHN49364.1 | 95.2 | 147 | 7 | 0 | 1 | 147 | 84 | 230 | 2.10E-75 | 291.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73909.t1 | Q8GT20 | 64.8 | 145 | 51 | 0 | 3 | 147 | 6 | 150 | 7.4e-53 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73909.t1 | G7L0T0 | 95.2 | 147 | 7 | 0 | 1 | 147 | 1 | 147 | 1.5e-75 | 291.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene73909 | 0.837061 | 6.49E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene73909 | 0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene73909 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene049232 | MS.gene73909 | 0.831734 | 1.41E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene73909 | 0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene73909 | 0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene73909 | 0.812621 | 3.87E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene73909 | 0.83156 | 1.56E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene73909 | 0.868214 | 7.71E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene73909 | 0.842512 | 2.47E-58 | -1.69E-46 |
| MS.gene049656 | MS.gene73909 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene73909 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene73909 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene73909 | 0.845721 | 3.40E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene73909 | 0.873917 | 1.01E-67 | -1.69E-46 |
| MS.gene050216 | MS.gene73909 | 0.804397 | 2.20E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene73909 | 0.861562 | 9.40E-64 | -1.69E-46 |
| MS.gene050496 | MS.gene73909 | 0.907802 | 3.42E-81 | -1.69E-46 |
| MS.gene050502 | MS.gene73909 | 0.8672 | 1.63E-65 | -1.69E-46 |
| MS.gene050504 | MS.gene73909 | 0.825207 | 5.32E-54 | -1.69E-46 |
| MS.gene050518 | MS.gene73909 | 0.801062 | 1.07E-48 | -1.69E-46 |
| MS.gene050520 | MS.gene73909 | 0.824626 | 7.29E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene73909 | 0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene73909 | 0.87952 | 1.17E-69 | -1.69E-46 |
| MS.gene050612 | MS.gene73909 | 0.828065 | 1.11E-54 | -1.69E-46 |
| MS.gene050662 | MS.gene73909 | 0.823329 | 1.47E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene73909 | 0.86923 | 3.62E-66 | -1.69E-46 |
| MS.gene050697 | MS.gene73909 | 0.836444 | 9.32E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene73909 | 0.841977 | 3.42E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene73909 | 0.84211 | 3.16E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene73909 | 0.867369 | 1.44E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene73909 | 0.833645 | 4.73E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene73909 | 0.830507 | 2.83E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene73909 | 0.866024 | 3.86E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene73909 | 0.867129 | 1.72E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene73909 | 0.81464 | 1.39E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene73909 | 0.837683 | 4.50E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene73909 | 0.834627 | 2.69E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene73909 | 0.835623 | 1.51E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene73909 | 0.802464 | 5.54E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene73909 | 0.820971 | 5.17E-53 | -1.69E-46 |
| MS.gene051455 | MS.gene73909 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene73909 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene73909 | 0.801246 | 9.86E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene73909 | 0.80667 | 7.35E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene73909 | 0.865951 | 4.07E-65 | -1.69E-46 |
| MS.gene051858 | MS.gene73909 | 0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene73909 | 0.839338 | 1.68E-57 | -1.69E-46 |
| MS.gene051941 | MS.gene73909 | 0.877169 | 7.80E-69 | -1.69E-46 |
| MS.gene052066 | MS.gene73909 | 0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene73909 | 0.820812 | 5.63E-53 | -1.69E-46 |
| MS.gene052318 | MS.gene73909 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene052346 | MS.gene73909 | 0.871507 | 6.48E-67 | -1.69E-46 |
| MS.gene052414 | MS.gene73909 | 0.805684 | 1.19E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene73909 | 0.811602 | 6.45E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene73909 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene73909 | 0.851924 | 6.47E-61 | -1.69E-46 |
| MS.gene052504 | MS.gene73909 | 0.832231 | 1.06E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene73909 | 0.845543 | 3.80E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene73909 | 0.831141 | 1.97E-55 | -1.69E-46 |
| MS.gene052820 | MS.gene73909 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene73909 | 0.851177 | 1.05E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene73909 | 0.843226 | 1.60E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene73909 | 0.839147 | 1.88E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene73909 | 0.810389 | 1.18E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene73909 | 0.820459 | 6.78E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene73909 | 0.887153 | 1.83E-72 | -1.69E-46 |
| MS.gene052999 | MS.gene73909 | 0.82574 | 3.97E-54 | -1.69E-46 |
| MS.gene053169 | MS.gene73909 | 0.811203 | 7.87E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene73909 | 0.871882 | 4.87E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene73909 | 0.852427 | 4.65E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene73909 | 0.834026 | 3.80E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene73909 | 0.832678 | 8.24E-56 | -1.69E-46 |
| MS.gene053318 | MS.gene73909 | 0.803599 | 3.23E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene73909 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene053449 | MS.gene73909 | 0.86035 | 2.20E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene73909 | 0.875746 | 2.42E-68 | -1.69E-46 |
| MS.gene053480 | MS.gene73909 | 0.816028 | 6.83E-52 | -1.69E-46 |
| MS.gene053505 | MS.gene73909 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene73909 | 0.853934 | 1.72E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene73909 | 0.811509 | 6.76E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene73909 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene73909 | 0.877939 | 4.20E-69 | -1.69E-46 |
| MS.gene053916 | MS.gene73909 | 0.805468 | 1.32E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene73909 | 0.815123 | 1.09E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene73909 | 0.84874 | 5.05E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene73909 | 0.848222 | 7.03E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene73909 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene73909 | -0.812941 | 3.29E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene73909 | -0.80979 | 1.59E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene73909 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene73909 | 0.849568 | 2.97E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene73909 | 0.833242 | 5.97E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene73909 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene73909 | 0.832075 | 1.16E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene73909 | 0.851744 | 7.27E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene73909 | 0.831589 | 1.53E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene73909 | 0.83063 | 2.64E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene73909 | 0.879848 | 8.91E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene73909 | 0.852954 | 3.29E-61 | -1.69E-46 |
| MS.gene055741 | MS.gene73909 | 0.855988 | 4.36E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene73909 | 0.846222 | 2.49E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene73909 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene73909 | 0.827837 | 1.25E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene73909 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene73909 | 0.847637 | 1.02E-59 | -1.69E-46 |
| MS.gene055909 | MS.gene73909 | 0.84856 | 5.67E-60 | -1.69E-46 |
| MS.gene055911 | MS.gene73909 | 0.845655 | 3.55E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene73909 | 0.806135 | 9.53E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene73909 | 0.860216 | 2.41E-63 | -1.69E-46 |
| MS.gene056166 | MS.gene73909 | 0.823374 | 1.43E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene73909 | 0.832926 | 7.15E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene73909 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene73909 | 0.870149 | 1.81E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene73909 | 0.844798 | 6.05E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene73909 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene73909 | 0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene73909 | 0.824264 | 8.87E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene73909 | 0.849991 | 2.27E-60 | -1.69E-46 |
| MS.gene056877 | MS.gene73909 | 0.872523 | 2.98E-67 | -1.69E-46 |
| MS.gene056878 | MS.gene73909 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene73909 | 0.814199 | 1.74E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene73909 | 0.812488 | 4.13E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene73909 | 0.852035 | 6.01E-61 | -1.69E-46 |
| MS.gene057076 | MS.gene73909 | 0.856518 | 3.05E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene73909 | 0.860411 | 2.11E-63 | -1.69E-46 |
| MS.gene057331 | MS.gene73909 | 0.861269 | 1.16E-63 | -1.69E-46 |
| MS.gene057332 | MS.gene73909 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene73909 | 0.828715 | 7.71E-55 | -1.69E-46 |
| MS.gene057473 | MS.gene73909 | -0.805149 | 1.53E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene73909 | 0.813515 | 2.46E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene73909 | 0.844228 | 8.61E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene73909 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene73909 | 0.84582 | 3.20E-59 | -1.69E-46 |
| MS.gene057857 | MS.gene73909 | 0.854478 | 1.20E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene73909 | 0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene73909 | 0.828475 | 8.80E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene73909 | 0.815271 | 1.01E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene73909 | 0.826507 | 2.61E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene73909 | 0.83266 | 8.33E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene73909 | 0.861003 | 1.39E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene73909 | 0.825223 | 5.27E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene73909 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene73909 | 0.804858 | 1.77E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene73909 | 0.826134 | 3.21E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene73909 | 0.832604 | 8.60E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene73909 | 0.855774 | 5.03E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene73909 | 0.821437 | 4.04E-53 | -1.69E-46 |
| MS.gene058978 | MS.gene73909 | -0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene73909 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene73909 | 0.860836 | 1.56E-63 | -1.69E-46 |
| MS.gene059129 | MS.gene73909 | 0.817855 | 2.66E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene73909 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene73909 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene059305 | MS.gene73909 | 0.818899 | 1.54E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene73909 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene73909 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene73909 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene73909 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene73909 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene73909 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene73909 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene73909 | 0.843553 | 1.31E-58 | -1.69E-46 |
| MS.gene059699 | MS.gene73909 | -0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene73909 | -0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene73909 | 0.846565 | 2.01E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene73909 | 0.828371 | 9.33E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene73909 | 0.83901 | 2.05E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene73909 | 0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene73909 | 0.848639 | 5.39E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene73909 | 0.815706 | 8.06E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene73909 | 0.866536 | 2.65E-65 | -1.69E-46 |
| MS.gene060193 | MS.gene73909 | 0.813398 | 2.61E-51 | -1.69E-46 |
| MS.gene06027 | MS.gene73909 | 0.80118 | 1.02E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene73909 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene060482 | MS.gene73909 | 0.845871 | 3.10E-59 | -1.69E-46 |
| MS.gene060593 | MS.gene73909 | -0.817875 | 2.63E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene73909 | -0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene73909 | 0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene73909 | 0.829441 | 5.14E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene73909 | 0.852608 | 4.13E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene73909 | 0.835536 | 1.58E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene73909 | 0.878004 | 3.99E-69 | -1.69E-46 |
| MS.gene060837 | MS.gene73909 | 0.851752 | 7.23E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene73909 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene73909 | 0.815998 | 6.94E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene73909 | 0.870198 | 1.75E-66 | -1.69E-46 |
| MS.gene061150 | MS.gene73909 | 0.806192 | 9.27E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73909.t1 | MTR_7g114490 | 95.238 | 147 | 7 | 0 | 1 | 147 | 1 | 147 | 1.84e-99 | 295 |
| MS.gene73909.t1 | MTR_7g114560 | 89.796 | 147 | 15 | 0 | 1 | 147 | 1 | 147 | 1.17e-92 | 276 |
| MS.gene73909.t1 | MTR_5g076700 | 88.435 | 147 | 17 | 0 | 1 | 147 | 1 | 147 | 1.62e-91 | 273 |
| MS.gene73909.t1 | MTR_7g114550 | 85.714 | 147 | 21 | 0 | 1 | 147 | 1 | 147 | 1.84e-89 | 268 |
| MS.gene73909.t1 | MTR_7g114500 | 82.000 | 150 | 27 | 0 | 1 | 150 | 1 | 150 | 2.19e-88 | 254 |
| MS.gene73909.t1 | MTR_7g114470 | 84.932 | 146 | 22 | 0 | 2 | 147 | 3 | 148 | 2.61e-88 | 265 |
| MS.gene73909.t1 | MTR_3g051790 | 76.871 | 147 | 34 | 0 | 1 | 147 | 4 | 150 | 1.16e-81 | 238 |
| MS.gene73909.t1 | MTR_7g114520 | 78.912 | 147 | 30 | 1 | 2 | 147 | 3 | 149 | 5.18e-79 | 241 |
| MS.gene73909.t1 | MTR_0042s0230 | 63.889 | 144 | 52 | 0 | 6 | 149 | 5 | 148 | 1.91e-67 | 201 |
| MS.gene73909.t1 | MTR_1g040320 | 63.380 | 142 | 52 | 0 | 6 | 147 | 5 | 146 | 6.77e-63 | 199 |
| MS.gene73909.t1 | MTR_1g040175 | 61.268 | 142 | 55 | 0 | 6 | 147 | 5 | 146 | 5.36e-62 | 197 |
| MS.gene73909.t1 | MTR_1g040315 | 61.972 | 142 | 54 | 0 | 6 | 147 | 5 | 146 | 7.57e-60 | 191 |
| MS.gene73909.t1 | MTR_1g040215 | 59.155 | 142 | 58 | 0 | 6 | 147 | 5 | 146 | 2.49e-59 | 190 |
| MS.gene73909.t1 | MTR_8g039950 | 62.992 | 127 | 47 | 0 | 3 | 129 | 2 | 128 | 1.98e-58 | 178 |
| MS.gene73909.t1 | MTR_1g081660 | 60.274 | 146 | 56 | 2 | 3 | 147 | 11 | 155 | 3.47e-56 | 182 |
| MS.gene73909.t1 | MTR_1g040195 | 57.042 | 142 | 38 | 1 | 6 | 147 | 5 | 123 | 2.18e-49 | 164 |
| MS.gene73909.t1 | MTR_7g114417 | 91.304 | 46 | 4 | 0 | 98 | 143 | 38 | 83 | 1.66e-24 | 90.5 |
| MS.gene73909.t1 | MTR_7g114417 | 83.333 | 42 | 7 | 0 | 1 | 42 | 1 | 42 | 2.15e-17 | 72.4 |
| MS.gene73909.t1 | MTR_7g027175 | 35.385 | 130 | 81 | 2 | 13 | 142 | 19 | 145 | 2.37e-23 | 94.7 |
| MS.gene73909.t1 | MTR_8g096530 | 32.143 | 140 | 92 | 2 | 8 | 147 | 5 | 141 | 5.76e-22 | 90.9 |
| MS.gene73909.t1 | MTR_3g098980 | 35.971 | 139 | 84 | 2 | 10 | 147 | 14 | 148 | 2.91e-20 | 85.9 |
| MS.gene73909.t1 | MTR_3g112180 | 33.333 | 138 | 80 | 3 | 18 | 150 | 20 | 150 | 2.83e-18 | 80.5 |
| MS.gene73909.t1 | MTR_7g110610 | 37.963 | 108 | 62 | 1 | 6 | 113 | 1 | 103 | 3.21e-18 | 80.1 |
| MS.gene73909.t1 | MTR_4g088765 | 44.444 | 72 | 40 | 0 | 3 | 74 | 2 | 73 | 1.55e-17 | 73.6 |
| MS.gene73909.t1 | MTR_4g055170 | 34.351 | 131 | 80 | 2 | 17 | 143 | 19 | 147 | 1.27e-16 | 75.9 |
| MS.gene73909.t1 | MTR_4g013050 | 38.144 | 97 | 54 | 2 | 20 | 116 | 14 | 104 | 3.39e-15 | 71.6 |
| MS.gene73909.t1 | MTR_0502s0010 | 65.957 | 47 | 16 | 0 | 101 | 147 | 1 | 47 | 3.79e-15 | 70.1 |
| MS.gene73909.t1 | MTR_3g071320 | 37.838 | 111 | 67 | 2 | 9 | 117 | 4 | 114 | 2.78e-14 | 68.9 |
| MS.gene73909.t1 | MTR_3g465930 | 31.884 | 138 | 84 | 4 | 4 | 133 | 6 | 141 | 1.22e-12 | 64.3 |
| MS.gene73909.t1 | MTR_2g105330 | 32.432 | 111 | 71 | 3 | 6 | 116 | 1 | 107 | 1.74e-12 | 63.9 |
| MS.gene73909.t1 | MTR_4g007540 | 39.474 | 76 | 45 | 1 | 41 | 116 | 33 | 107 | 2.74e-12 | 63.5 |
| MS.gene73909.t1 | MTR_1g053315 | 29.932 | 147 | 90 | 5 | 8 | 147 | 24 | 164 | 7.07e-12 | 62.4 |
| MS.gene73909.t1 | MTR_3g026950 | 34.343 | 99 | 62 | 2 | 18 | 116 | 10 | 105 | 1.18e-11 | 61.6 |
| MS.gene73909.t1 | MTR_8g075610 | 32.000 | 100 | 66 | 2 | 17 | 116 | 1 | 98 | 1.44e-11 | 61.2 |
| MS.gene73909.t1 | MTR_3g049150 | 31.298 | 131 | 84 | 4 | 18 | 147 | 10 | 135 | 2.09e-11 | 60.8 |
| MS.gene73909.t1 | MTR_2g064495 | 31.532 | 111 | 72 | 3 | 6 | 116 | 1 | 107 | 3.17e-11 | 60.5 |
| MS.gene73909.t1 | MTR_5g084870 | 33.043 | 115 | 65 | 4 | 16 | 123 | 9 | 118 | 4.22e-11 | 60.1 |
| MS.gene73909.t1 | MTR_7g085990 | 32.039 | 103 | 66 | 3 | 16 | 116 | 8 | 108 | 4.54e-11 | 60.1 |
| MS.gene73909.t1 | MTR_7g085930 | 32.039 | 103 | 66 | 3 | 16 | 116 | 12 | 112 | 5.05e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73909.t1 | AT5G17540 | 61.905 | 147 | 53 | 2 | 3 | 147 | 2 | 147 | 5.97e-58 | 187 |
| MS.gene73909.t1 | AT3G03480 | 58.784 | 148 | 58 | 2 | 2 | 147 | 11 | 157 | 3.31e-51 | 169 |
| MS.gene73909.t1 | AT3G48720 | 35.417 | 144 | 89 | 3 | 8 | 150 | 7 | 147 | 1.13e-23 | 95.5 |
| MS.gene73909.t1 | AT5G41040 | 36.090 | 133 | 82 | 2 | 10 | 142 | 33 | 162 | 4.27e-22 | 91.3 |
| MS.gene73909.t1 | AT5G41040 | 36.090 | 133 | 82 | 2 | 10 | 142 | 17 | 146 | 5.75e-22 | 90.9 |
| MS.gene73909.t1 | AT5G63560 | 35.862 | 145 | 84 | 3 | 10 | 150 | 9 | 148 | 8.19e-22 | 90.5 |
| MS.gene73909.t1 | AT1G27620 | 38.971 | 136 | 75 | 4 | 13 | 147 | 12 | 140 | 5.82e-21 | 88.2 |
| MS.gene73909.t1 | AT5G57840 | 36.449 | 107 | 64 | 2 | 10 | 115 | 3 | 106 | 1.04e-15 | 73.2 |
| MS.gene73909.t1 | AT2G40230 | 38.462 | 104 | 57 | 3 | 10 | 109 | 5 | 105 | 1.78e-13 | 67.0 |
| MS.gene73909.t1 | AT3G62160 | 34.234 | 111 | 67 | 2 | 6 | 115 | 1 | 106 | 2.79e-13 | 66.2 |
| MS.gene73909.t1 | AT5G48930 | 32.824 | 131 | 84 | 3 | 17 | 147 | 10 | 136 | 3.40e-13 | 66.2 |
| MS.gene73909.t1 | AT2G19070 | 34.821 | 112 | 71 | 1 | 36 | 147 | 29 | 138 | 5.43e-13 | 65.5 |
| MS.gene73909.t1 | AT5G07080 | 34.783 | 115 | 72 | 3 | 3 | 114 | 7 | 121 | 9.78e-13 | 64.7 |
| MS.gene73909.t1 | AT3G47170 | 34.513 | 113 | 69 | 3 | 8 | 115 | 10 | 122 | 1.35e-12 | 64.3 |
| MS.gene73909.t1 | AT1G31490 | 33.028 | 109 | 68 | 3 | 7 | 111 | 3 | 110 | 5.64e-11 | 59.7 |
Find 0 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATAATATGTTCC+AGG | + | 51730:22848-22867 | MS.gene73909:intron | 15.0% |
| ! | AGTGAGTATGTCAAATTTAT+TGG | - | 51730:22827-22846 | None:intergenic | 25.0% |
| ! | ATGTAACACTTGATCAATTT+GGG | + | 51730:22652-22671 | MS.gene73909:CDS | 25.0% |
| ! | CATGTCTAAGAACTTTAATA+GGG | - | 51730:22512-22531 | None:intergenic | 25.0% |
| GATGTAACACTTGATCAATT+TGG | + | 51730:22651-22670 | MS.gene73909:CDS | 30.0% | |
| GCATGTCTAAGAACTTTAAT+AGG | - | 51730:22513-22532 | None:intergenic | 30.0% | |
| TGACGATAGATAAACATCAT+AGG | - | 51730:22465-22484 | None:intergenic | 30.0% | |
| TGTAACACTTGATCAATTTG+GGG | + | 51730:22653-22672 | MS.gene73909:CDS | 30.0% | |
| ! | GATAATAGTTTAACTTCACG+AGG | - | 51730:22405-22424 | None:intergenic | 30.0% |
| !! | ATAGAAGTTCTTTGAAGCAT+GGG | - | 51730:22698-22717 | None:intergenic | 30.0% |
| !! | TATAGAAGTTCTTTGAAGCA+TGG | - | 51730:22699-22718 | None:intergenic | 30.0% |
| !! | TCAATAATTAGTTCTGATCC+TGG | - | 51730:22729-22748 | None:intergenic | 30.0% |
| !!! | GGGTTTTTTTCTTTCATTGA+CGG | - | 51730:22492-22511 | None:intergenic | 30.0% |
| ATTACTATCCATTTGCAGGA+AGG | + | 51730:22553-22572 | MS.gene73909:CDS | 35.0% | |
| GAATGCGATAATTGAAACGT+AGG | - | 51730:22805-22824 | None:intergenic | 35.0% | |
| GTGTATTACTATCCATTTGC+AGG | + | 51730:22549-22568 | MS.gene73909:CDS | 35.0% | |
| TCTGACATAGATGATCAAGA+AGG | + | 51730:22423-22442 | MS.gene73909:CDS | 35.0% | |
| TTTACCTGTATGAGTCGAAT+GGG | - | 51730:22756-22775 | None:intergenic | 35.0% | |
| ! | TTTTACCTGTATGAGTCGAA+TGG | - | 51730:22757-22776 | None:intergenic | 35.0% |
| ATCCATTTGCAGGAAGGATT+AGG | + | 51730:22559-22578 | MS.gene73909:CDS | 40.0% | |
| CACCATTATTGTTCACAGTG+CGG | + | 51730:22340-22359 | MS.gene73909:CDS | 40.0% | |
| GAACTTCTATACGATGTTCC+AGG | + | 51730:22708-22727 | MS.gene73909:CDS | 40.0% | |
| TCCATTTGCAGGAAGGATTA+GGG | + | 51730:22560-22579 | MS.gene73909:CDS | 40.0% | |
| TTACCTGTATGAGTCGAATG+GGG | - | 51730:22755-22774 | None:intergenic | 40.0% | |
| ! | TAGTTTAACTTCACGAGGAG+TGG | - | 51730:22400-22419 | None:intergenic | 40.0% |
| !! | AAGTTGATGGTGGATTGTAC+TGG | + | 51730:22597-22616 | MS.gene73909:CDS | 40.0% |
| !! | AGTTCTTTGAAGCATGGGAA+TGG | - | 51730:22693-22712 | None:intergenic | 40.0% |
| !! | GTTCTTTGAAGCATGGGAAT+GGG | - | 51730:22692-22711 | None:intergenic | 40.0% |
| !! | TTCTTTGAAGCATGGGAATG+GGG | - | 51730:22691-22710 | None:intergenic | 40.0% |
| ATTTGCAGGAAGGATTAGGG+AGG | + | 51730:22563-22582 | MS.gene73909:CDS | 45.0% | |
| CATTATTGTTCACAGTGCGG+AGG | + | 51730:22343-22362 | MS.gene73909:CDS | 45.0% | |
| CTCCGCACTGTGAACAATAA+TGG | - | 51730:22345-22364 | None:intergenic | 45.0% | |
| TCCCTAATCCTTCCTGCAAA+TGG | - | 51730:22564-22583 | None:intergenic | 45.0% | |
| TTTGCAGGAAGGATTAGGGA+GGG | + | 51730:22564-22583 | MS.gene73909:CDS | 45.0% | |
| !! | ATGGTGGATTGTACTGGTGA+GGG | + | 51730:22603-22622 | MS.gene73909:CDS | 45.0% |
| !! | TCTTTGAAGCATGGGAATGG+GGG | - | 51730:22690-22709 | None:intergenic | 45.0% |
| !! | GATGGTGGATTGTACTGGTG+AGG | + | 51730:22602-22621 | MS.gene73909:CDS | 50.0% |
| CCTGTATGAGTCGAATGGGG+CGG | - | 51730:22752-22771 | None:intergenic | 55.0% | |
| !! | GAAGGATTAGGGAGGGTGCT+GGG | + | 51730:22571-22590 | MS.gene73909:CDS | 55.0% |
| !! | TGCTGGGCGTAAGTTGATGG+TGG | + | 51730:22587-22606 | MS.gene73909:CDS | 55.0% |
| CCGCCCCATTCGACTCATAC+AGG | + | 51730:22749-22768 | MS.gene73909:CDS | 60.0% | |
| TCACGAGGAGTGGAAGCAGC+TGG | - | 51730:22390-22409 | None:intergenic | 60.0% | |
| ! | GGAAGGATTAGGGAGGGTGC+TGG | + | 51730:22570-22589 | MS.gene73909:CDS | 60.0% |
| !! | GGGTGCTGGGCGTAAGTTGA+TGG | + | 51730:22584-22603 | MS.gene73909:CDS | 60.0% |
| CGAGGAGTGGAAGCAGCTGG+TGG | - | 51730:22387-22406 | None:intergenic | 65.0% | |
| ! | CTGGTGGCACCAGCTCTGGT+TGG | - | 51730:22371-22390 | None:intergenic | 65.0% |
| GCAGCTGGTGGCACCAGCTC+TGG | - | 51730:22375-22394 | None:intergenic | 70.0% | |
| GCGGAGGAGCCAACCAGAGC+TGG | + | 51730:22359-22378 | MS.gene73909:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51730 | gene | 22330 | 22881 | 22330 | ID=MS.gene73909 |
| 51730 | mRNA | 22330 | 22881 | 22330 | ID=MS.gene73909.t1;Parent=MS.gene73909 |
| 51730 | exon | 22330 | 22770 | 22330 | ID=MS.gene73909.t1.exon1;Parent=MS.gene73909.t1 |
| 51730 | CDS | 22330 | 22770 | 22330 | ID=cds.MS.gene73909.t1;Parent=MS.gene73909.t1 |
| 51730 | exon | 22870 | 22881 | 22870 | ID=MS.gene73909.t1.exon2;Parent=MS.gene73909.t1 |
| 51730 | CDS | 22870 | 22881 | 22870 | ID=cds.MS.gene73909.t1;Parent=MS.gene73909.t1 |
| Gene Sequence |
| Protein sequence |
