Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53595.t1 | XP_013467142.1 | 98.4 | 448 | 7 | 0 | 1 | 448 | 1 | 448 | 3.00E-258 | 900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53595.t1 | Q8GS60 | 81.1 | 456 | 77 | 1 | 2 | 448 | 7 | 462 | 2.2e-222 | 772.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53595.t1 | A0A072VIA1 | 98.4 | 448 | 7 | 0 | 1 | 448 | 1 | 448 | 2.1e-258 | 900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene53595 | 0.871959 | 4.59E-67 | -1.69E-46 |
| MS.gene049217 | MS.gene53595 | 0.84059 | 7.94E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene53595 | 0.878068 | 3.79E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene53595 | 0.864312 | 1.33E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene53595 | 0.881961 | 1.55E-70 | -1.69E-46 |
| MS.gene049320 | MS.gene53595 | 0.878331 | 3.06E-69 | -1.69E-46 |
| MS.gene049609 | MS.gene53595 | 0.865305 | 6.50E-65 | -1.69E-46 |
| MS.gene049611 | MS.gene53595 | -0.839631 | 1.41E-57 | -1.69E-46 |
| MS.gene049627 | MS.gene53595 | 0.815215 | 1.04E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene53595 | 0.874469 | 6.59E-68 | -1.69E-46 |
| MS.gene049656 | MS.gene53595 | 0.806366 | 8.52E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene53595 | 0.841902 | 3.58E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene53595 | 0.87712 | 8.11E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene53595 | 0.841524 | 4.51E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene53595 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene53595 | 0.895869 | 6.36E-76 | -1.69E-46 |
| MS.gene050216 | MS.gene53595 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene53595 | 0.874731 | 5.37E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene53595 | 0.826832 | 2.19E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene53595 | -0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene53595 | 0.821727 | 3.46E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene53595 | 0.906057 | 2.23E-80 | -1.69E-46 |
| MS.gene050502 | MS.gene53595 | 0.824884 | 6.34E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene53595 | 0.891508 | 3.72E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene53595 | 0.859032 | 5.47E-63 | -1.69E-46 |
| MS.gene050520 | MS.gene53595 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene53595 | 0.81399 | 1.94E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene53595 | 0.875057 | 4.16E-68 | -1.69E-46 |
| MS.gene050593 | MS.gene53595 | 0.830809 | 2.38E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene53595 | 0.892257 | 1.87E-74 | -1.69E-46 |
| MS.gene050662 | MS.gene53595 | 0.808441 | 3.09E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene53595 | 0.901824 | 1.81E-78 | -1.69E-46 |
| MS.gene050697 | MS.gene53595 | 0.836899 | 7.14E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene53595 | 0.893137 | 8.31E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene53595 | 0.861459 | 1.01E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene53595 | 0.871737 | 5.44E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene53595 | 0.870973 | 9.73E-67 | -1.69E-46 |
| MS.gene05081 | MS.gene53595 | 0.813126 | 3.00E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene53595 | 0.893727 | 4.80E-75 | -1.69E-46 |
| MS.gene050871 | MS.gene53595 | 0.894204 | 3.07E-75 | -1.69E-46 |
| MS.gene050876 | MS.gene53595 | 0.834342 | 3.17E-56 | -1.69E-46 |
| MS.gene050904 | MS.gene53595 | 0.868103 | 8.37E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene53595 | 0.862915 | 3.61E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene53595 | 0.895294 | 1.10E-75 | -1.69E-46 |
| MS.gene05104 | MS.gene53595 | -0.828929 | 6.84E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene53595 | -0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene53595 | -0.818538 | 1.86E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene53595 | 0.879528 | 1.16E-69 | -1.69E-46 |
| MS.gene051317 | MS.gene53595 | 0.872671 | 2.66E-67 | -1.69E-46 |
| MS.gene051364 | MS.gene53595 | -0.812776 | 3.58E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene53595 | -0.804776 | 1.84E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene53595 | 0.80821 | 3.46E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene53595 | 0.819782 | 9.69E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene53595 | 0.841144 | 5.68E-58 | -1.69E-46 |
| MS.gene051560 | MS.gene53595 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene53595 | 0.834579 | 2.76E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene53595 | 0.837407 | 5.29E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene53595 | 0.853373 | 2.50E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene53595 | 0.825758 | 3.94E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene53595 | 0.842913 | 1.93E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene53595 | 0.841167 | 5.60E-58 | -1.69E-46 |
| MS.gene051946 | MS.gene53595 | -0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene052066 | MS.gene53595 | 0.81109 | 8.33E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene53595 | -0.80285 | 4.61E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene53595 | 0.872388 | 3.30E-67 | -1.69E-46 |
| MS.gene052318 | MS.gene53595 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene53595 | 0.80329 | 3.74E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene53595 | 0.85458 | 1.12E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene53595 | 0.872109 | 4.09E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene53595 | 0.855831 | 4.84E-62 | -1.69E-46 |
| MS.gene052504 | MS.gene53595 | 0.829804 | 4.19E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene53595 | 0.843879 | 1.07E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene53595 | 0.849963 | 2.31E-60 | -1.69E-46 |
| MS.gene052822 | MS.gene53595 | 0.850058 | 2.17E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene53595 | 0.851129 | 1.08E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene53595 | 0.852185 | 5.45E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene53595 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene53595 | 0.839551 | 1.48E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene53595 | 0.817947 | 2.53E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene53595 | 0.886974 | 2.14E-72 | -1.69E-46 |
| MS.gene053018 | MS.gene53595 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene53595 | 0.917349 | 5.92E-86 | -1.69E-46 |
| MS.gene053207 | MS.gene53595 | 0.852926 | 3.35E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene53595 | 0.864877 | 8.86E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene53595 | 0.869494 | 2.97E-66 | -1.69E-46 |
| MS.gene053318 | MS.gene53595 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene53595 | -0.858329 | 8.88E-63 | -1.69E-46 |
| MS.gene053421 | MS.gene53595 | -0.810646 | 1.04E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene53595 | 0.857489 | 1.58E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene53595 | 0.895543 | 8.68E-76 | -1.69E-46 |
| MS.gene053480 | MS.gene53595 | 0.840711 | 7.38E-58 | -1.69E-46 |
| MS.gene053549 | MS.gene53595 | -0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene53595 | 0.875895 | 2.15E-68 | -1.69E-46 |
| MS.gene053626 | MS.gene53595 | 0.852342 | 4.92E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene53595 | 0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene53595 | 0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene53595 | 0.872217 | 3.77E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene53595 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene054003 | MS.gene53595 | 0.834438 | 3.00E-56 | -1.69E-46 |
| MS.gene054344 | MS.gene53595 | 0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene53595 | 0.814195 | 1.74E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene53595 | 0.872901 | 2.23E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene53595 | 0.86821 | 7.73E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene53595 | 0.848939 | 4.45E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene53595 | -0.84673 | 1.81E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene53595 | -0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene53595 | -0.805794 | 1.12E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene53595 | 0.8645 | 1.16E-64 | -1.69E-46 |
| MS.gene054927 | MS.gene53595 | 0.82423 | 9.04E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene53595 | 0.842761 | 2.12E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene53595 | 0.894357 | 2.66E-75 | -1.69E-46 |
| MS.gene055154 | MS.gene53595 | -0.819015 | 1.45E-52 | -1.69E-46 |
| MS.gene055158 | MS.gene53595 | -0.812307 | 4.53E-51 | -1.69E-46 |
| MS.gene055202 | MS.gene53595 | -0.808642 | 2.80E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene53595 | 0.823735 | 1.18E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene53595 | 0.836333 | 9.95E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene53595 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene53595 | 0.887722 | 1.11E-72 | -1.69E-46 |
| MS.gene055502 | MS.gene53595 | 0.870975 | 9.72E-67 | -1.69E-46 |
| MS.gene055577 | MS.gene53595 | 0.909153 | 7.80E-82 | -1.69E-46 |
| MS.gene055722 | MS.gene53595 | 0.839301 | 1.72E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene53595 | 0.858551 | 7.62E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene53595 | 0.862775 | 3.99E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene53595 | 0.863029 | 3.33E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene53595 | 0.830816 | 2.37E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene53595 | 0.87952 | 1.17E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene53595 | 0.84327 | 1.55E-58 | -1.69E-46 |
| MS.gene056040 | MS.gene53595 | 0.82582 | 3.81E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene53595 | 0.826519 | 2.59E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene53595 | 0.821552 | 3.80E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene53595 | 0.816725 | 4.77E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene53595 | -0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene53595 | 0.817067 | 4.00E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene53595 | 0.851363 | 9.32E-61 | -1.69E-46 |
| MS.gene056409 | MS.gene53595 | 0.837946 | 3.85E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene53595 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene53595 | 0.802594 | 5.21E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene53595 | 0.807884 | 4.07E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene53595 | 0.808662 | 2.77E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene53595 | 0.897316 | 1.58E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene53595 | 0.882684 | 8.47E-71 | -1.69E-46 |
| MS.gene056610 | MS.gene53595 | 0.835552 | 1.57E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene53595 | 0.870683 | 1.21E-66 | -1.69E-46 |
| MS.gene05666 | MS.gene53595 | 0.83077 | 2.44E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene53595 | 0.868061 | 8.64E-66 | -1.69E-46 |
| MS.gene056856 | MS.gene53595 | -0.811605 | 6.44E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene53595 | 0.820361 | 7.15E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene53595 | 0.82119 | 4.60E-53 | -1.69E-46 |
| MS.gene056946 | MS.gene53595 | 0.8186 | 1.80E-52 | -1.69E-46 |
| MS.gene056947 | MS.gene53595 | 0.815944 | 7.13E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene53595 | -0.814753 | 1.31E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene53595 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene53595 | 0.836903 | 7.12E-57 | -1.69E-46 |
| MS.gene057086 | MS.gene53595 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene53595 | 0.844586 | 6.90E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene53595 | 0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene53595 | 0.843084 | 1.74E-58 | -1.69E-46 |
| MS.gene057473 | MS.gene53595 | -0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene53595 | 0.839962 | 1.16E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene53595 | 0.810568 | 1.08E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene53595 | 0.880999 | 3.45E-70 | -1.69E-46 |
| MS.gene057857 | MS.gene53595 | 0.834923 | 2.26E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene53595 | 0.856553 | 2.98E-62 | -1.69E-46 |
| MS.gene058068 | MS.gene53595 | -0.811712 | 6.10E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene53595 | -0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene53595 | 0.824541 | 7.63E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene53595 | 0.873335 | 1.59E-67 | -1.69E-46 |
| MS.gene058171 | MS.gene53595 | -0.824761 | 6.78E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene53595 | -0.821044 | 4.98E-53 | -1.69E-46 |
| MS.gene058175 | MS.gene53595 | -0.826522 | 2.59E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene53595 | -0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene058269 | MS.gene53595 | -0.816522 | 5.30E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene53595 | -0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene53595 | 0.840367 | 9.07E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene53595 | 0.899247 | 2.39E-77 | -1.69E-46 |
| MS.gene058419 | MS.gene53595 | 0.863238 | 2.87E-64 | -1.69E-46 |
| MS.gene058544 | MS.gene53595 | 0.859395 | 4.26E-63 | -1.69E-46 |
| MS.gene058723 | MS.gene53595 | 0.82836 | 9.39E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene53595 | 0.883458 | 4.41E-71 | -1.69E-46 |
| MS.gene058838 | MS.gene53595 | 0.851321 | 9.58E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene53595 | 0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene53595 | 0.890183 | 1.24E-73 | -1.69E-46 |
| MS.gene059023 | MS.gene53595 | 0.894769 | 1.81E-75 | -1.69E-46 |
| MS.gene059181 | MS.gene53595 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene53595 | -0.815669 | 8.21E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene53595 | 0.814466 | 1.52E-51 | -1.69E-46 |
| MS.gene059305 | MS.gene53595 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene53595 | 0.803817 | 2.91E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene53595 | 0.850282 | 1.88E-60 | -1.69E-46 |
| MS.gene059667 | MS.gene53595 | 0.827879 | 1.23E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene53595 | 0.87659 | 1.24E-68 | -1.69E-46 |
| MS.gene059680 | MS.gene53595 | 0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene059699 | MS.gene53595 | -0.820374 | 7.09E-53 | -1.69E-46 |
| MS.gene059703 | MS.gene53595 | -0.823725 | 1.19E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene53595 | 0.889445 | 2.41E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene53595 | 0.859193 | 4.90E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene53595 | 0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene53595 | 0.853387 | 2.47E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene53595 | 0.891781 | 2.90E-74 | -1.69E-46 |
| MS.gene059902 | MS.gene53595 | 0.821306 | 4.33E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene53595 | 0.90139 | 2.81E-78 | -1.69E-46 |
| MS.gene060187 | MS.gene53595 | -0.812593 | 3.92E-51 | -1.69E-46 |
| MS.gene06027 | MS.gene53595 | 0.830386 | 3.02E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene53595 | 0.846731 | 1.81E-59 | -1.69E-46 |
| MS.gene060593 | MS.gene53595 | -0.824139 | 9.49E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene53595 | -0.85353 | 2.25E-61 | -1.69E-46 |
| MS.gene060602 | MS.gene53595 | -0.824244 | 8.97E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene53595 | 0.834908 | 2.28E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene53595 | 0.870827 | 1.09E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene53595 | 0.887261 | 1.67E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene53595 | 0.90002 | 1.11E-77 | -1.69E-46 |
| MS.gene060835 | MS.gene53595 | 0.833157 | 6.27E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene53595 | 0.801272 | 9.74E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene53595 | 0.846758 | 1.78E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene53595 | 0.90082 | 5.00E-78 | -1.69E-46 |
| MS.gene061150 | MS.gene53595 | 0.857063 | 2.11E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53595.t1 | MTR_1g046250 | 98.438 | 448 | 7 | 0 | 1 | 448 | 1 | 448 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53595.t1 | AT1G04620 | 85.106 | 423 | 63 | 0 | 26 | 448 | 40 | 462 | 0.0 | 785 |
Find 110 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGTTTCCAACAAATTT+TGG | 0.060069 | 1.2:+29195670 | None:intergenic |
| ATTTATACGTAAACCGGATA+TGG | 0.201591 | 1.2:-29195456 | MS.gene53595:CDS |
| TGTGGAGCACCACTTGAATT+TGG | 0.214139 | 1.2:-29198107 | MS.gene53595:CDS |
| TCATAATGGAGAACTGTTTC+AGG | 0.214817 | 1.2:+29197904 | None:intergenic |
| ATGCTGATCCCGGAATATTT+TGG | 0.246247 | 1.2:+29196444 | None:intergenic |
| GGACTTGGTCGTTGGATATA+TGG | 0.270258 | 1.2:-29196472 | MS.gene53595:CDS |
| GCTGATGATAAAGCTAAATT+TGG | 0.271815 | 1.2:-29196063 | MS.gene53595:intron |
| CTGTCTCCCAGCAAATGATT+TGG | 0.288560 | 1.2:-29196849 | MS.gene53595:CDS |
| TTAGCAGCCATCACTTCTTC+TGG | 0.292447 | 1.2:+29200082 | None:intergenic |
| TAAGAATGCTTGTGCTTTCT+TGG | 0.303722 | 1.2:-29202547 | MS.gene53595:CDS |
| CAACAAGCGCAAGGGTATTA+AGG | 0.316182 | 1.2:+29200032 | None:intergenic |
| GCAGGTTCACTTGAAGCATT+TGG | 0.351862 | 1.2:-29196982 | MS.gene53595:intron |
| AGAATCCTCCATTTCAAAAC+AGG | 0.357846 | 1.2:-29202673 | MS.gene53595:CDS |
| ATGGGCGTGCCAAAATATTC+CGG | 0.367935 | 1.2:-29196453 | MS.gene53595:CDS |
| ACCTTTCCTTTCCCCATATC+CGG | 0.379150 | 1.2:+29195443 | None:intergenic |
| ACTTCAACCAAATCATTTGC+TGG | 0.381495 | 1.2:+29196842 | None:intergenic |
| CAGCCTGCCCCAAAATTTGT+TGG | 0.382744 | 1.2:-29195679 | MS.gene53595:CDS |
| AATCTTGCATAAACTCATAA+TGG | 0.386967 | 1.2:+29197890 | None:intergenic |
| CCCTAAGTAGGTCTCATCTA+AGG | 0.390531 | 1.2:+29201430 | None:intergenic |
| CTCCCTCTACCATGAACAAC+AGG | 0.400077 | 1.2:+29201464 | None:intergenic |
| TAGGTTCCACCTGGTGGGAT+AGG | 0.404466 | 1.2:+29202630 | None:intergenic |
| TTTCTGTGGTGTAGGTTGCC+AGG | 0.407229 | 1.2:-29198244 | MS.gene53595:CDS |
| GGAACTATTTATACGTAAAC+CGG | 0.411362 | 1.2:-29195462 | MS.gene53595:CDS |
| TTTATACGTAAACCGGATAT+GGG | 0.418788 | 1.2:-29195455 | MS.gene53595:CDS |
| AAACCTTGCTAAAACAGGTC+TGG | 0.419885 | 1.2:+29200202 | None:intergenic |
| TAAATTGTTGCAGGGCTGAT+AGG | 0.421045 | 1.2:-29195349 | MS.gene53595:intron |
| GCAATCGAAATGCTTAAATC+AGG | 0.427560 | 1.2:-29200391 | MS.gene53595:CDS |
| CGTGCAAATTCAATGCCCTT+TGG | 0.430479 | 1.2:+29195511 | None:intergenic |
| AAGAATGCTTGTGCTTTCTT+GGG | 0.435235 | 1.2:-29202546 | MS.gene53595:CDS |
| GACTTGGTCGTTGGATATAT+GGG | 0.435737 | 1.2:-29196471 | MS.gene53595:CDS |
| TTTGCTGGGAGACAGAAATA+AGG | 0.436430 | 1.2:+29196857 | None:intergenic |
| CGCTTGATTATCATACCATT+CGG | 0.443793 | 1.2:-29195483 | MS.gene53595:CDS |
| TTATTGCTCCATCTTGCTAC+AGG | 0.449524 | 1.2:-29196820 | MS.gene53595:intron |
| CCTCCATTTCAAAACAGGAT+TGG | 0.452697 | 1.2:-29202668 | MS.gene53595:CDS |
| TGGGCGTGCCAAAATATTCC+GGG | 0.453200 | 1.2:-29196452 | MS.gene53595:CDS |
| CAATGGAACCAGGGAAGGAC+TGG | 0.454699 | 1.2:-29197956 | MS.gene53595:CDS |
| CAAAACAGGATTGGAGGAAA+AGG | 0.456733 | 1.2:-29202659 | MS.gene53595:CDS |
| AAACTGGAACCTGTTGTTCA+TGG | 0.461027 | 1.2:-29201473 | MS.gene53595:CDS |
| GCTTGTGCTTTCTTGGGAGA+TGG | 0.464642 | 1.2:-29202540 | MS.gene53595:CDS |
| ACCTTAGATGAGACCTACTT+AGG | 0.468167 | 1.2:-29201431 | MS.gene53595:CDS |
| ATTTGTCATGGAGACTGTTA+AGG | 0.468608 | 1.2:-29196085 | MS.gene53595:CDS |
| CTGGGAGCAAATCTGTCATC+AGG | 0.474109 | 1.2:+29200221 | None:intergenic |
| AAGCACGAATGGAGAGAGAA+AGG | 0.476898 | 1.2:+29202952 | None:intergenic |
| TGACTGCATTGATCTTTAGC+AGG | 0.479498 | 1.2:+29202606 | None:intergenic |
| GTTGCAAACCTTGCTAAAAC+AGG | 0.480000 | 1.2:+29200197 | None:intergenic |
| AGCACGAATGGAGAGAGAAA+GGG | 0.480170 | 1.2:+29202953 | None:intergenic |
| AGTCAGAATATACCTTCGAC+AGG | 0.483412 | 1.2:+29201371 | None:intergenic |
| TGAGTTTATGCAAGATTACA+AGG | 0.484461 | 1.2:-29197884 | MS.gene53595:intron |
| AACCTTGCTAAAACAGGTCT+GGG | 0.486509 | 1.2:+29200203 | None:intergenic |
| AAACTTATCCAGTCCTTCCC+TGG | 0.487043 | 1.2:+29197948 | None:intergenic |
| TATGTTCAGGTTGGTCCAAA+GGG | 0.488373 | 1.2:-29195526 | MS.gene53595:intron |
| TTCATAGGGGCTCAATGGAC+TGG | 0.489426 | 1.2:-29200430 | MS.gene53595:intron |
| TTTCATCATTGACAGGCTGC+AGG | 0.493106 | 1.2:-29198282 | MS.gene53595:intron |
| TAACTTACTGAATTAACTGT+TGG | 0.494896 | 1.2:+29196191 | None:intergenic |
| CCATTTCAAAACAGGATTGG+AGG | 0.498238 | 1.2:-29202665 | MS.gene53595:CDS |
| CCTTAGATGAGACCTACTTA+GGG | 0.500323 | 1.2:-29201430 | MS.gene53595:CDS |
| CGTGCTTCTTCTTCATCACA+AGG | 0.507247 | 1.2:-29202936 | MS.gene53595:intron |
| GCAGGGTAGGTTCCACCTGG+TGG | 0.508024 | 1.2:+29202624 | None:intergenic |
| CTATGTTCAGGTTGGTCCAA+AGG | 0.510081 | 1.2:-29195527 | MS.gene53595:intron |
| GCATTGATCTTTAGCAGGGT+AGG | 0.515192 | 1.2:+29202611 | None:intergenic |
| ACAAATAACCTGTAGCAAGA+TGG | 0.517182 | 1.2:+29196812 | None:intergenic |
| GAACCTGTTGTTCATGGTAG+AGG | 0.519967 | 1.2:-29201467 | MS.gene53595:CDS |
| CATAATGGAGAACTGTTTCA+GGG | 0.520042 | 1.2:+29197905 | None:intergenic |
| AGCGCAAGGGTATTAAGGTT+AGG | 0.527839 | 1.2:+29200037 | None:intergenic |
| TTTAAGCATTTCGATTGCAA+TGG | 0.529732 | 1.2:+29200396 | None:intergenic |
| CTTCAACCAAATCATTTGCT+GGG | 0.530866 | 1.2:+29196843 | None:intergenic |
| TTAACAGTCTCCATGACAAA+TGG | 0.534122 | 1.2:+29196087 | None:intergenic |
| TAATACCCTTGCGCTTGTTG+AGG | 0.535155 | 1.2:-29200029 | MS.gene53595:intron |
| ATGAGGAACTGCTGTATGCT+CGG | 0.536651 | 1.2:-29201403 | MS.gene53595:CDS |
| ATCCACAATATATTACTGTC+AGG | 0.540157 | 1.2:-29196413 | MS.gene53595:intron |
| CGACAGTGGACAATGGAACC+AGG | 0.543521 | 1.2:-29197966 | MS.gene53595:intron |
| TTAAGGTTAGGAGATAATGT+TGG | 0.544648 | 1.2:+29200049 | None:intergenic |
| TTCATATGCTAAGAAAATTG+TGG | 0.556041 | 1.2:-29195318 | MS.gene53595:CDS |
| GAAGAAGTGATGGCTGCTAA+AGG | 0.556856 | 1.2:-29200079 | MS.gene53595:CDS |
| GGTGTAGGTTGCCAGGTCCA+AGG | 0.559413 | 1.2:-29198237 | MS.gene53595:intron |
| TACCTGACAGTAATATATTG+TGG | 0.560089 | 1.2:+29196411 | None:intergenic |
| TGATGAAGAAGAAGCACGAA+TGG | 0.570140 | 1.2:+29202941 | None:intergenic |
| CGTAAACCGGATATGGGGAA+AGG | 0.578319 | 1.2:-29195449 | MS.gene53595:CDS |
| GCACGAATGGAGAGAGAAAG+GGG | 0.578714 | 1.2:+29202954 | None:intergenic |
| AATTGCAGCATTAAGATCTG+TGG | 0.579563 | 1.2:-29198125 | MS.gene53595:intron |
| CACAAACCTCAACAAGCGCA+AGG | 0.579807 | 1.2:+29200023 | None:intergenic |
| CGAAATGCTTAAATCAGGCA+TGG | 0.588143 | 1.2:-29200386 | MS.gene53595:CDS |
| CAGTAGTGGTACCTTGGACC+TGG | 0.590071 | 1.2:+29198226 | None:intergenic |
| GACTGCATTGATCTTTAGCA+GGG | 0.590270 | 1.2:+29202607 | None:intergenic |
| ATGTTGTGTCATGCTGATCC+CGG | 0.590801 | 1.2:+29196434 | None:intergenic |
| TACGTATAAATAGTTCCGAA+TGG | 0.593464 | 1.2:+29195468 | None:intergenic |
| AAGCTGTCATTTGTGTACAA+AGG | 0.596616 | 1.2:-29200360 | MS.gene53595:intron |
| TTAGCAGGGTAGGTTCCACC+TGG | 0.597375 | 1.2:+29202621 | None:intergenic |
| CCTTATTCGACAGTGGACAA+TGG | 0.600320 | 1.2:-29197973 | MS.gene53595:intron |
| GGATAGGCGACCATTTGTCA+TGG | 0.606587 | 1.2:-29196097 | MS.gene53595:CDS |
| CAGGGTAGGTTCCACCTGGT+GGG | 0.606958 | 1.2:+29202625 | None:intergenic |
| TTTGGACGGTCATATTGAAG+AGG | 0.607502 | 1.2:-29196964 | MS.gene53595:intron |
| AACCTGTTGTTCATGGTAGA+GGG | 0.608220 | 1.2:-29201466 | MS.gene53595:CDS |
| CAGGACACCAGAAGAAGTGA+TGG | 0.608289 | 1.2:-29200089 | MS.gene53595:CDS |
| GTGGACAATGGAACCAGGGA+AGG | 0.613783 | 1.2:-29197961 | MS.gene53595:CDS |
| TTCCTCATAGATCCCTAAGT+AGG | 0.616756 | 1.2:+29201418 | None:intergenic |
| ACCGGATATGGGGAAAGGAA+AGG | 0.620649 | 1.2:-29195444 | MS.gene53595:intron |
| GTTCACTTGAAGCATTTGGA+CGG | 0.622614 | 1.2:-29196978 | MS.gene53595:CDS |
| TTATACGTAAACCGGATATG+GGG | 0.631884 | 1.2:-29195454 | MS.gene53595:CDS |
| AGAGCTTATCCAAATTCAAG+TGG | 0.635776 | 1.2:+29198098 | None:intergenic |
| AGGTCAAAACCTATCCCACC+AGG | 0.637225 | 1.2:-29202639 | MS.gene53595:CDS |
| CGGAAACTTAACCCTGTCGA+AGG | 0.641199 | 1.2:-29201383 | MS.gene53595:intron |
| ACAAACCTCAACAAGCGCAA+GGG | 0.656935 | 1.2:+29200024 | None:intergenic |
| AAAGATCAATGCAGTCAGTG+TGG | 0.664762 | 1.2:-29202600 | MS.gene53595:CDS |
| GACCTACTTAGGGATCTATG+AGG | 0.669965 | 1.2:-29201420 | MS.gene53595:CDS |
| GACAGTGGACAATGGAACCA+GGG | 0.676637 | 1.2:-29197965 | MS.gene53595:intron |
| GTCAGAATATACCTTCGACA+GGG | 0.677868 | 1.2:+29201372 | None:intergenic |
| ATAATGGAGAACTGTTTCAG+GGG | 0.681913 | 1.2:+29197906 | None:intergenic |
| TCAAAACCTATCCCACCAGG+TGG | 0.709148 | 1.2:-29202636 | MS.gene53595:CDS |
| TGAAACGACAGGAATGAACG+TGG | 0.713648 | 1.2:-29196257 | MS.gene53595:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 29195268 | 29202997 | 29195268 | ID=MS.gene53595 |
| chr1.2 | mRNA | 29195268 | 29202997 | 29195268 | ID=MS.gene53595.t1;Parent=MS.gene53595 |
| chr1.2 | exon | 29202937 | 29202997 | 29202937 | ID=MS.gene53595.t1.exon1;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29202937 | 29202997 | 29202937 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29202524 | 29202693 | 29202524 | ID=MS.gene53595.t1.exon2;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29202524 | 29202693 | 29202524 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29201384 | 29201495 | 29201384 | ID=MS.gene53595.t1.exon3;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29201384 | 29201495 | 29201384 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29200361 | 29200445 | 29200361 | ID=MS.gene53595.t1.exon4;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29200361 | 29200445 | 29200361 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29200206 | 29200247 | 29200206 | ID=MS.gene53595.t1.exon5;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29200206 | 29200247 | 29200206 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29200030 | 29200108 | 29200030 | ID=MS.gene53595.t1.exon6;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29200030 | 29200108 | 29200030 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29198238 | 29198289 | 29198238 | ID=MS.gene53595.t1.exon7;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29198238 | 29198289 | 29198238 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29198077 | 29198139 | 29198077 | ID=MS.gene53595.t1.exon8;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29198077 | 29198139 | 29198077 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29197885 | 29197982 | 29197885 | ID=MS.gene53595.t1.exon9;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29197885 | 29197982 | 29197885 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196965 | 29197000 | 29196965 | ID=MS.gene53595.t1.exon10;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196965 | 29197000 | 29196965 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196821 | 29196882 | 29196821 | ID=MS.gene53595.t1.exon11;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196821 | 29196882 | 29196821 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196677 | 29196704 | 29196677 | ID=MS.gene53595.t1.exon12;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196677 | 29196704 | 29196677 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196414 | 29196493 | 29196414 | ID=MS.gene53595.t1.exon13;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196414 | 29196493 | 29196414 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196199 | 29196268 | 29196199 | ID=MS.gene53595.t1.exon14;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196199 | 29196268 | 29196199 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29196064 | 29196121 | 29196064 | ID=MS.gene53595.t1.exon15;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29196064 | 29196121 | 29196064 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29195651 | 29195715 | 29195651 | ID=MS.gene53595.t1.exon16;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29195651 | 29195715 | 29195651 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29195445 | 29195539 | 29195445 | ID=MS.gene53595.t1.exon17;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29195445 | 29195539 | 29195445 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| chr1.2 | exon | 29195268 | 29195358 | 29195268 | ID=MS.gene53595.t1.exon18;Parent=MS.gene53595.t1 |
| chr1.2 | CDS | 29195268 | 29195358 | 29195268 | ID=cds.MS.gene53595.t1;Parent=MS.gene53595.t1 |
| Gene Sequence |
| Protein sequence |
