Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86479.t1 | XP_003612461.2 | 97.8 | 492 | 11 | 0 | 10 | 501 | 90 | 581 | 2.90E-286 | 993.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86479.t1 | O49675 | 73.5 | 499 | 121 | 5 | 10 | 498 | 98 | 595 | 2.8e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86479.t1 | G7K3Y7 | 97.8 | 492 | 11 | 0 | 10 | 501 | 90 | 581 | 2.1e-286 | 993.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene86479 | 0.866183 | 3.43E-65 | -1.69E-46 |
| MS.gene049171 | MS.gene86479 | 0.853315 | 2.59E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene86479 | 0.824357 | 8.43E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene86479 | 0.868176 | 7.93E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene86479 | 0.81228 | 4.59E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene86479 | 0.843403 | 1.43E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene86479 | 0.856962 | 2.26E-62 | -1.69E-46 |
| MS.gene049427 | MS.gene86479 | 0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene86479 | 0.880792 | 4.10E-70 | -1.69E-46 |
| MS.gene049615 | MS.gene86479 | 0.863655 | 2.13E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene86479 | 0.86167 | 8.72E-64 | -1.69E-46 |
| MS.gene05010 | MS.gene86479 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene86479 | 0.811991 | 5.31E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene86479 | 0.812219 | 4.73E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene86479 | 0.804919 | 1.71E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene86479 | 0.826848 | 2.17E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene86479 | 0.83215 | 1.11E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene86479 | 0.816487 | 5.39E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene86479 | 0.841138 | 5.70E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene86479 | 0.851951 | 6.35E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene86479 | 0.880381 | 5.75E-70 | -1.69E-46 |
| MS.gene050612 | MS.gene86479 | 0.81718 | 3.77E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene86479 | 0.8167 | 4.83E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene86479 | 0.815413 | 9.36E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene86479 | 0.865971 | 4.01E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene86479 | 0.89564 | 7.91E-76 | -1.69E-46 |
| MS.gene050772 | MS.gene86479 | 0.882579 | 9.26E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene86479 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene86479 | 0.816374 | 5.72E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene86479 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene86479 | 0.805879 | 1.08E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene86479 | 0.880671 | 4.53E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene86479 | 0.831556 | 1.56E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene86479 | 0.827786 | 1.29E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene86479 | 0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene051113 | MS.gene86479 | -0.815899 | 7.30E-52 | -1.69E-46 |
| MS.gene051167 | MS.gene86479 | -0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene86479 | 0.87168 | 5.68E-67 | -1.69E-46 |
| MS.gene051525 | MS.gene86479 | 0.804784 | 1.83E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene86479 | 0.845492 | 3.93E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene86479 | 0.869411 | 3.16E-66 | -1.69E-46 |
| MS.gene051692 | MS.gene86479 | 0.848992 | 4.30E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene86479 | 0.852887 | 3.44E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene86479 | 0.849534 | 3.04E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene86479 | 0.820001 | 8.64E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene86479 | 0.843185 | 1.64E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene86479 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene86479 | 0.81222 | 4.73E-51 | -1.69E-46 |
| MS.gene052322 | MS.gene86479 | 0.824024 | 1.01E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene86479 | 0.856021 | 4.26E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene86479 | 0.828785 | 7.41E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene86479 | 0.837457 | 5.14E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene86479 | 0.850348 | 1.80E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene86479 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene86479 | 0.820427 | 6.90E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene86479 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene86479 | 0.894619 | 2.08E-75 | -1.69E-46 |
| MS.gene052503 | MS.gene86479 | 0.902791 | 6.76E-79 | -1.69E-46 |
| MS.gene052504 | MS.gene86479 | 0.831019 | 2.12E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene86479 | 0.875592 | 2.73E-68 | -1.69E-46 |
| MS.gene052506 | MS.gene86479 | 0.861589 | 9.22E-64 | -1.69E-46 |
| MS.gene052615 | MS.gene86479 | 0.856948 | 2.28E-62 | -1.69E-46 |
| MS.gene052820 | MS.gene86479 | 0.840051 | 1.10E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene86479 | 0.850407 | 1.73E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene86479 | 0.894546 | 2.23E-75 | -1.69E-46 |
| MS.gene052825 | MS.gene86479 | 0.895518 | 8.88E-76 | -1.69E-46 |
| MS.gene052966 | MS.gene86479 | 0.832443 | 9.43E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene86479 | 0.879323 | 1.37E-69 | -1.69E-46 |
| MS.gene053104 | MS.gene86479 | 0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene86479 | 0.820103 | 8.19E-53 | -1.69E-46 |
| MS.gene053117 | MS.gene86479 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene86479 | 0.868368 | 6.88E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene86479 | 0.875748 | 2.41E-68 | -1.69E-46 |
| MS.gene053213 | MS.gene86479 | 0.897383 | 1.48E-76 | -1.69E-46 |
| MS.gene053286 | MS.gene86479 | 0.890154 | 1.27E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene86479 | 0.813512 | 2.47E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene86479 | 0.950421 | 1.70E-108 | -1.69E-46 |
| MS.gene053449 | MS.gene86479 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene86479 | 0.816631 | 5.01E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene86479 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene86479 | 0.877132 | 8.03E-69 | -1.69E-46 |
| MS.gene053579 | MS.gene86479 | 0.822473 | 2.32E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene86479 | 0.828195 | 1.03E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene86479 | 0.855271 | 7.06E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene86479 | 0.826348 | 2.85E-54 | -1.69E-46 |
| MS.gene053873 | MS.gene86479 | 0.813123 | 3.00E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene86479 | 0.817384 | 3.39E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene86479 | 0.845801 | 3.24E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene86479 | 0.856606 | 2.87E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene86479 | 0.869523 | 2.91E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene86479 | 0.848311 | 6.64E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene86479 | 0.818913 | 1.53E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene86479 | -0.820096 | 8.22E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene86479 | 0.877156 | 7.88E-69 | -1.69E-46 |
| MS.gene054954 | MS.gene86479 | 0.823617 | 1.26E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene86479 | 0.840247 | 9.76E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene86479 | 0.853073 | 3.04E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene86479 | 0.814078 | 1.85E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene86479 | 0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene86479 | 0.871037 | 9.27E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene86479 | 0.87778 | 4.78E-69 | -1.69E-46 |
| MS.gene055502 | MS.gene86479 | 0.844399 | 7.74E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene86479 | 0.856538 | 3.01E-62 | -1.69E-46 |
| MS.gene055629 | MS.gene86479 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene86479 | 0.827098 | 1.89E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene86479 | 0.858514 | 7.82E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene86479 | 0.801385 | 9.23E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene86479 | 0.816892 | 4.38E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene86479 | 0.8221 | 2.84E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene86479 | 0.822047 | 2.92E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene86479 | 0.81813 | 2.30E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene86479 | 0.852268 | 5.16E-61 | -1.69E-46 |
| MS.gene056040 | MS.gene86479 | 0.836487 | 9.09E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene86479 | 0.825638 | 4.20E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene86479 | 0.832745 | 7.93E-56 | -1.69E-46 |
| MS.gene056263 | MS.gene86479 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene056346 | MS.gene86479 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene86479 | 0.883112 | 5.91E-71 | -1.69E-46 |
| MS.gene056407 | MS.gene86479 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene86479 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene86479 | 0.812531 | 4.04E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene86479 | 0.811145 | 8.10E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene86479 | 0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene86479 | 0.847387 | 1.19E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene86479 | 0.815919 | 7.22E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene86479 | 0.82536 | 4.89E-54 | -1.69E-46 |
| MS.gene056514 | MS.gene86479 | 0.817546 | 3.12E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene86479 | 0.823628 | 1.25E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene86479 | 0.860002 | 2.80E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene86479 | 0.860061 | 2.69E-63 | -1.69E-46 |
| MS.gene05666 | MS.gene86479 | 0.853958 | 1.69E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene86479 | 0.812003 | 5.27E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene86479 | 0.848638 | 5.40E-60 | -1.69E-46 |
| MS.gene056878 | MS.gene86479 | 0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene86479 | -0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene86479 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene86479 | 0.806694 | 7.27E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene86479 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene86479 | 0.843126 | 1.70E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene86479 | 0.803964 | 2.71E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene86479 | 0.80818 | 3.51E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene86479 | 0.811815 | 5.80E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene86479 | 0.831784 | 1.37E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene86479 | 0.868535 | 6.08E-66 | -1.69E-46 |
| MS.gene057332 | MS.gene86479 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene86479 | 0.88935 | 2.62E-73 | -1.69E-46 |
| MS.gene057658 | MS.gene86479 | 0.853864 | 1.80E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene86479 | 0.845545 | 3.80E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene86479 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene86479 | 0.809849 | 1.54E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene86479 | 0.844442 | 7.54E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene86479 | 0.84479 | 6.08E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene86479 | 0.82034 | 7.22E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene86479 | 0.894692 | 1.94E-75 | -1.69E-46 |
| MS.gene058323 | MS.gene86479 | 0.827059 | 1.93E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene86479 | 0.814797 | 1.28E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene86479 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene86479 | 0.838212 | 3.29E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene86479 | 0.865737 | 4.75E-65 | -1.69E-46 |
| MS.gene058444 | MS.gene86479 | 0.809001 | 2.35E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene86479 | 0.876611 | 1.22E-68 | -1.69E-46 |
| MS.gene058700 | MS.gene86479 | 0.809491 | 1.84E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene86479 | 0.806192 | 9.27E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene86479 | 0.821345 | 4.24E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene86479 | 0.882539 | 9.57E-71 | -1.69E-46 |
| MS.gene05883 | MS.gene86479 | 0.858678 | 6.99E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene86479 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene86479 | 0.838506 | 2.76E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene86479 | 0.847931 | 8.46E-60 | -1.69E-46 |
| MS.gene059303 | MS.gene86479 | 0.825889 | 3.66E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene86479 | 0.850712 | 1.42E-60 | -1.69E-46 |
| MS.gene059367 | MS.gene86479 | 0.825042 | 5.82E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene86479 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene86479 | 0.828095 | 1.09E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene86479 | 0.830826 | 2.36E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene86479 | 0.819471 | 1.14E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene86479 | 0.83713 | 6.23E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene86479 | 0.869154 | 3.83E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene86479 | 0.841277 | 5.24E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene86479 | 0.835106 | 2.04E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene86479 | 0.810582 | 1.07E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene86479 | 0.818602 | 1.80E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene86479 | 0.804841 | 1.78E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene86479 | 0.82619 | 3.11E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene86479 | 0.862233 | 5.86E-64 | -1.69E-46 |
| MS.gene060482 | MS.gene86479 | 0.867425 | 1.38E-65 | -1.69E-46 |
| MS.gene060485 | MS.gene86479 | 0.83591 | 1.27E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene86479 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene86479 | 0.860985 | 1.41E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene86479 | 0.846948 | 1.58E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene86479 | 0.87481 | 5.05E-68 | -1.69E-46 |
| MS.gene060837 | MS.gene86479 | 0.833224 | 6.03E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene86479 | 0.884391 | 2.00E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene86479 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene86479 | 0.825317 | 5.01E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene86479 | 0.851052 | 1.14E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene86479 | 0.826681 | 2.37E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86479.t1 | MTR_5g025270 | 97.764 | 492 | 11 | 0 | 10 | 501 | 90 | 581 | 0.0 | 1001 |
| MS.gene86479.t1 | MTR_5g025230 | 87.602 | 492 | 60 | 1 | 10 | 501 | 88 | 578 | 0.0 | 905 |
| MS.gene86479.t1 | MTR_5g025250 | 85.976 | 492 | 68 | 1 | 10 | 501 | 89 | 579 | 0.0 | 894 |
| MS.gene86479.t1 | MTR_2g070460 | 38.821 | 492 | 288 | 9 | 12 | 497 | 124 | 608 | 5.45e-123 | 373 |
| MS.gene86479.t1 | MTR_8g037315 | 39.679 | 499 | 276 | 8 | 19 | 497 | 43 | 536 | 2.97e-115 | 350 |
| MS.gene86479.t1 | MTR_8g037275 | 37.675 | 499 | 282 | 9 | 20 | 497 | 81 | 571 | 3.46e-108 | 333 |
| MS.gene86479.t1 | MTR_8g037290 | 37.475 | 499 | 283 | 9 | 20 | 497 | 81 | 571 | 9.04e-107 | 330 |
| MS.gene86479.t1 | MTR_8g037310 | 37.400 | 500 | 284 | 10 | 19 | 497 | 80 | 571 | 7.98e-106 | 327 |
| MS.gene86479.t1 | MTR_3g110195 | 28.850 | 513 | 297 | 18 | 26 | 490 | 86 | 578 | 1.22e-51 | 185 |
| MS.gene86479.t1 | MTR_3g109610 | 26.316 | 494 | 291 | 23 | 41 | 490 | 98 | 562 | 7.73e-24 | 105 |
| MS.gene86479.t1 | MTR_7g063800 | 26.166 | 493 | 293 | 23 | 41 | 490 | 98 | 562 | 2.52e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86479.t1 | AT4G19170 | 73.547 | 499 | 121 | 5 | 10 | 498 | 98 | 595 | 0.0 | 771 |
| MS.gene86479.t1 | AT3G63520 | 41.400 | 500 | 269 | 8 | 19 | 500 | 44 | 537 | 5.71e-125 | 375 |
| MS.gene86479.t1 | AT1G30100 | 40.816 | 490 | 278 | 9 | 12 | 495 | 102 | 585 | 5.24e-121 | 367 |
| MS.gene86479.t1 | AT3G14440 | 39.919 | 496 | 283 | 10 | 12 | 500 | 112 | 599 | 8.52e-118 | 359 |
| MS.gene86479.t1 | AT4G18350 | 38.900 | 491 | 287 | 8 | 12 | 495 | 95 | 579 | 8.57e-116 | 353 |
| MS.gene86479.t1 | AT1G78390 | 38.554 | 498 | 286 | 11 | 12 | 501 | 172 | 657 | 2.92e-113 | 349 |
| MS.gene86479.t1 | AT3G24220 | 37.652 | 494 | 295 | 11 | 10 | 497 | 88 | 574 | 1.15e-103 | 322 |
| MS.gene86479.t1 | AT2G44990 | 24.868 | 567 | 301 | 28 | 32 | 492 | 71 | 618 | 5.53e-12 | 68.6 |
| MS.gene86479.t1 | AT2G44990 | 24.868 | 567 | 301 | 28 | 32 | 492 | 75 | 622 | 6.92e-12 | 68.2 |
Find 127 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCTCTTGACATGATTTC+TGG | 0.197088 | 5.1:+15769297 | MS.gene86479:CDS |
| ATTTGCATCAAAACGGAAAT+AGG | 0.215073 | 5.1:-15769163 | None:intergenic |
| CTTGTCATTATGATGGGTTT+TGG | 0.244030 | 5.1:-15768259 | None:intergenic |
| ACACAATGTGAAATCATTAA+AGG | 0.269615 | 5.1:+15768607 | MS.gene86479:CDS |
| GTGAAGATTAATATCAAAAC+TGG | 0.276508 | 5.1:+15769558 | MS.gene86479:CDS |
| AATCCAATGCCAAAGATTTC+AGG | 0.293364 | 5.1:+15769684 | MS.gene86479:CDS |
| CTAGATTTCGGGGTGATAAA+TGG | 0.295975 | 5.1:+15769615 | MS.gene86479:CDS |
| AATCTTGACGGCCGATTGTT+TGG | 0.307017 | 5.1:-15769038 | None:intergenic |
| AGAAGAGGATGATGGTTATT+TGG | 0.316567 | 5.1:+15769812 | MS.gene86479:CDS |
| CAGCGCGAAACCTAGATTTC+GGG | 0.327084 | 5.1:+15769604 | MS.gene86479:CDS |
| TCAGCGCGAAACCTAGATTT+CGG | 0.334134 | 5.1:+15769603 | MS.gene86479:CDS |
| TTCACCACTCCTGAAATCTT+TGG | 0.336330 | 5.1:-15769693 | None:intergenic |
| CATTTATCACCCCGAAATCT+AGG | 0.339483 | 5.1:-15769614 | None:intergenic |
| TCTAGGTTTCGCGCTGATAA+TGG | 0.342314 | 5.1:-15769597 | None:intergenic |
| ACCGCAGCACGTGTCATATC+TGG | 0.342484 | 5.1:+15768889 | MS.gene86479:CDS |
| AACACAAGTTTGGCTTTGTT+TGG | 0.358095 | 5.1:+15768946 | MS.gene86479:CDS |
| TTGCTTACTTGTCATTATGA+TGG | 0.373595 | 5.1:-15768266 | None:intergenic |
| TTGTATGGAGAGGGTTGTTA+TGG | 0.374199 | 5.1:+15769753 | MS.gene86479:CDS |
| AGGTTTGTTTATGCGGCAAT+TGG | 0.386277 | 5.1:+15769660 | MS.gene86479:CDS |
| TGGTTTAGCCAACACAAGTT+TGG | 0.393154 | 5.1:+15768936 | MS.gene86479:CDS |
| TGTTAAACATAACGATGTTC+CGG | 0.404869 | 5.1:+15769188 | MS.gene86479:CDS |
| GCTAAACCAATGCCGTTAGA+AGG | 0.408884 | 5.1:-15768922 | None:intergenic |
| GGTGTAAGCTTGATTTCATA+AGG | 0.411021 | 5.1:-15769003 | None:intergenic |
| ACTCCTGAAATCTTTGGCAT+TGG | 0.436531 | 5.1:-15769687 | None:intergenic |
| CGTGGAAGAAACTGTGGGTT+TGG | 0.439102 | 5.1:-15768673 | None:intergenic |
| ACACTTCCACCGTCACTTAA+CGG | 0.447215 | 5.1:+15768631 | MS.gene86479:CDS |
| GATGAAATGGTTCGATGTGC+CGG | 0.449124 | 5.1:+15769398 | MS.gene86479:CDS |
| CCTAAAATTGACGGCGACAC+TGG | 0.451020 | 5.1:+15769096 | MS.gene86479:CDS |
| AAACCATACGGCACCCTCCT+TGG | 0.455270 | 5.1:-15769930 | None:intergenic |
| GTGTTGGAGGGAGTTCATCT+AGG | 0.458028 | 5.1:-15768588 | None:intergenic |
| ATTTCTGGTGGTTCTCCAGT+AGG | 0.459625 | 5.1:+15769312 | MS.gene86479:CDS |
| AACGGCGCTTACATAAGAAA+TGG | 0.460728 | 5.1:+15768649 | MS.gene86479:CDS |
| CCGATCCATCAAAAGTTTCA+AGG | 0.463927 | 5.1:+15769337 | MS.gene86479:CDS |
| TGCTTACTTGTCATTATGAT+GGG | 0.465517 | 5.1:-15768265 | None:intergenic |
| TGCTCAATGGAGAGAACATT+CGG | 0.468229 | 5.1:-15769492 | None:intergenic |
| TAACACCATTTGCATCAAAA+CGG | 0.472715 | 5.1:-15769170 | None:intergenic |
| CGCGATCAATGCGTGGGATG+GGG | 0.473648 | 5.1:+15769437 | MS.gene86479:CDS |
| TACAATCCTTCTAACGGCAT+TGG | 0.476143 | 5.1:+15768916 | MS.gene86479:CDS |
| ACGCGATCAATGCGTGGGAT+GGG | 0.477959 | 5.1:+15769436 | MS.gene86479:CDS |
| TATGGAGAGGGTTGTTATGG+TGG | 0.479678 | 5.1:+15769756 | MS.gene86479:CDS |
| AAAACACGTTTGGTATAAGT+TGG | 0.483154 | 5.1:-15768822 | None:intergenic |
| GTGACGAGTCGAAGATGAAA+TGG | 0.483688 | 5.1:+15769385 | MS.gene86479:CDS |
| GAAGTTGGATGTAGGTTGTA+TGG | 0.483755 | 5.1:+15769738 | MS.gene86479:CDS |
| TTATGTGCATGATGAGAAGA+AGG | 0.484903 | 5.1:+15769839 | MS.gene86479:CDS |
| GTTTGCCGTTAAAATCTTGA+CGG | 0.485908 | 5.1:-15769050 | None:intergenic |
| CACGCGATCAATGCGTGGGA+TGG | 0.488713 | 5.1:+15769435 | MS.gene86479:CDS |
| CCTCTTGACATGATTTCTGG+TGG | 0.488783 | 5.1:+15769300 | MS.gene86479:CDS |
| TTGAAACCAGAAAACACGTT+TGG | 0.493801 | 5.1:-15768832 | None:intergenic |
| GTCGCCGGAGTTTGAGATTG+TGG | 0.494521 | 5.1:+15769893 | MS.gene86479:CDS |
| ATTGTTTGGATATCACCGTT+TGG | 0.495988 | 5.1:-15769024 | None:intergenic |
| AACGGTGATATCCAAACAAT+CGG | 0.496479 | 5.1:+15769027 | MS.gene86479:CDS |
| TCCCTACGACACCGACAACT+TGG | 0.500531 | 5.1:-15769985 | None:intergenic |
| TCTCTCCATCGTATGCTCAA+TGG | 0.500819 | 5.1:-15769505 | None:intergenic |
| TTAATGATTTCACATTGTGT+TGG | 0.501774 | 5.1:-15768604 | None:intergenic |
| TTTGATGGATCGGAACCTAC+TGG | 0.501938 | 5.1:-15769327 | None:intergenic |
| TACAAAATCGAAAACGAAGC+TGG | 0.505480 | 5.1:+15768796 | MS.gene86479:CDS |
| ATGAAATGGTTCGATGTGCC+GGG | 0.506377 | 5.1:+15769399 | MS.gene86479:CDS |
| AAAGAATAGGTTTGTTTATG+CGG | 0.507283 | 5.1:+15769653 | MS.gene86479:CDS |
| GGTCTTGTCATGGAGAAAAC+CGG | 0.510037 | 5.1:-15769207 | None:intergenic |
| GGTTTGTTTATGCGGCAATT+GGG | 0.511453 | 5.1:+15769661 | MS.gene86479:CDS |
| ACTGCTCATCCTAAAATTGA+CGG | 0.512038 | 5.1:+15769087 | MS.gene86479:CDS |
| ATGATTTCACATTGTGTTGG+AGG | 0.513822 | 5.1:-15768601 | None:intergenic |
| GGAGTTTGAGATTGTGGCGG+AGG | 0.515266 | 5.1:+15769899 | MS.gene86479:CDS |
| CACCAAGTTGTCGGTGTCGT+AGG | 0.521647 | 5.1:+15769983 | MS.gene86479:CDS |
| CACGCCATTACAATCTCAAA+CGG | 0.522637 | 5.1:+15768733 | MS.gene86479:CDS |
| GCGAAATCATGAAGAAAAGA+AGG | 0.525570 | 5.1:-15769228 | None:intergenic |
| GAGGGAGGATGGTGAAGAAG+AGG | 0.527711 | 5.1:+15769797 | MS.gene86479:CDS |
| ACCAAGTTGTCGGTGTCGTA+GGG | 0.528287 | 5.1:+15769984 | MS.gene86479:CDS |
| CCATCAAAAGTTTCAAGGAT+CGG | 0.531863 | 5.1:+15769342 | MS.gene86479:CDS |
| GGTGATGGATGCGAAGTCGC+CGG | 0.538159 | 5.1:+15769878 | MS.gene86479:CDS |
| GTGTTTACGGATATTCAGCT+TGG | 0.543147 | 5.1:+15769270 | MS.gene86479:CDS |
| TGATTTCACATTGTGTTGGA+GGG | 0.543631 | 5.1:-15768600 | None:intergenic |
| TCATGCACGCGATCAATGCG+TGG | 0.547541 | 5.1:+15769430 | MS.gene86479:CDS |
| GAAATCAAGCTTACACCAAA+CGG | 0.548084 | 5.1:+15769009 | MS.gene86479:CDS |
| ATTTGTAAGTTTGAACGTAA+CGG | 0.551232 | 5.1:-15768774 | None:intergenic |
| TATGACACGTGCTGCGGTGA+CGG | 0.553634 | 5.1:-15768884 | None:intergenic |
| GTGATAAATGGTGATTACAT+GGG | 0.557337 | 5.1:+15769627 | MS.gene86479:CDS |
| GGAGGGAGTTCATCTAGGAC+TGG | 0.561404 | 5.1:-15768583 | None:intergenic |
| TAAGCTTGATTTCATAAGGA+AGG | 0.561782 | 5.1:-15768999 | None:intergenic |
| TACCACCTCTTCGACGGTGA+TGG | 0.565615 | 5.1:+15768703 | MS.gene86479:CDS |
| GGATGTAGGTTGTATGGAGA+GGG | 0.565942 | 5.1:+15769744 | MS.gene86479:CDS |
| ACATGTCTTGGATCTACAGA+TGG | 0.569645 | 5.1:-15768541 | None:intergenic |
| TGCCATCACCGTCGAAGAGG+TGG | 0.571502 | 5.1:-15768705 | None:intergenic |
| GAGTGACATCACCAAGTTGT+CGG | 0.571610 | 5.1:+15769974 | MS.gene86479:CDS |
| TGGATGTAGGTTGTATGGAG+AGG | 0.572621 | 5.1:+15769743 | MS.gene86479:CDS |
| TCACCGTCGAAGAGGTGGTA+AGG | 0.575068 | 5.1:-15768700 | None:intergenic |
| GGTGATAAATGGTGATTACA+TGG | 0.575102 | 5.1:+15769626 | MS.gene86479:CDS |
| TCCGCCACAATCTCAAACTC+CGG | 0.575111 | 5.1:-15769897 | None:intergenic |
| CTTATAGCTTCTGCTGCACG+TGG | 0.575305 | 5.1:+15768859 | MS.gene86479:CDS |
| AGGATGAGCAGTCATACTCA+TGG | 0.575328 | 5.1:-15769076 | None:intergenic |
| AACGTAACGGCTACAGAGTG+TGG | 0.575577 | 5.1:-15768761 | None:intergenic |
| TATGTGCATGATGAGAAGAA+GGG | 0.578787 | 5.1:+15769840 | MS.gene86479:CDS |
| AAGAAAAGAAGGTCTTGTCA+TGG | 0.578816 | 5.1:-15769217 | None:intergenic |
| AAACAAAGCCAAACTTGTGT+TGG | 0.580683 | 5.1:-15768944 | None:intergenic |
| AATAATCCATGAAAACCATA+CGG | 0.583712 | 5.1:-15769942 | None:intergenic |
| ATGTAAGCGCCGTTAAGTGA+CGG | 0.584811 | 5.1:-15768640 | None:intergenic |
| AAGGTGAGGAAGTTGGATGT+AGG | 0.586152 | 5.1:+15769730 | MS.gene86479:CDS |
| CCACCAGAAATCATGTCAAG+AGG | 0.590568 | 5.1:-15769300 | None:intergenic |
| GATGGTGAAGAAGAGGATGA+TGG | 0.592671 | 5.1:+15769804 | MS.gene86479:CDS |
| CGGAGGTGAAGTTGCCAAGG+AGG | 0.593842 | 5.1:+15769916 | MS.gene86479:CDS |
| GTGGGATGGGGAAGATGATG+AGG | 0.595645 | 5.1:+15769449 | MS.gene86479:CDS |
| GGAGGTGAAGTTGCCAAGGA+GGG | 0.600925 | 5.1:+15769917 | MS.gene86479:CDS |
| TTGCCAAGGAGGGTGCCGTA+TGG | 0.604907 | 5.1:+15769927 | MS.gene86479:CDS |
| ATGAGAAGAAGGGAGAGTCA+AGG | 0.607088 | 5.1:+15769850 | MS.gene86479:CDS |
| GTGTTGAAAGGTGAGGAAGT+TGG | 0.610000 | 5.1:+15769723 | MS.gene86479:CDS |
| GGACAATACAATCCTTCTAA+CGG | 0.610598 | 5.1:+15768910 | MS.gene86479:CDS |
| TGGCGGAGGTGAAGTTGCCA+AGG | 0.613374 | 5.1:+15769913 | MS.gene86479:CDS |
| GTGAAGATAGATGTGTTGAA+AGG | 0.624379 | 5.1:+15769711 | MS.gene86479:CDS |
| GGTCCACGTGGAAGAAACTG+TGG | 0.628559 | 5.1:-15768679 | None:intergenic |
| GCATGCCATCACCGTCGAAG+AGG | 0.632272 | 5.1:-15768708 | None:intergenic |
| GATAGATGTGTTGAAAGGTG+AGG | 0.636429 | 5.1:+15769716 | MS.gene86479:CDS |
| CATGCACGCGATCAATGCGT+GGG | 0.637360 | 5.1:+15769431 | MS.gene86479:CDS |
| AGCGCGAAACCTAGATTTCG+GGG | 0.639612 | 5.1:+15769605 | MS.gene86479:CDS |
| GCGTGCATGATATTAAATCC+CGG | 0.640976 | 5.1:-15769417 | None:intergenic |
| GGACCTTACCACCTCTTCGA+CGG | 0.645380 | 5.1:+15768697 | MS.gene86479:CDS |
| AATGCCAAAGATTTCAGGAG+TGG | 0.648962 | 5.1:+15769689 | MS.gene86479:CDS |
| AACCCACAGTTTCTTCCACG+TGG | 0.651198 | 5.1:+15768676 | MS.gene86479:CDS |
| GCCGGAGTTTGAGATTGTGG+CGG | 0.652926 | 5.1:+15769896 | MS.gene86479:CDS |
| TGATAAATGGTGATTACATG+GGG | 0.658268 | 5.1:+15769628 | MS.gene86479:CDS |
| TGAAGATTAATATCAAAACT+GGG | 0.668404 | 5.1:+15769559 | MS.gene86479:CDS |
| TCCAGATATGACACGTGCTG+CGG | 0.676934 | 5.1:-15768890 | None:intergenic |
| GTCCACGTGGAAGAAACTGT+GGG | 0.688234 | 5.1:-15768678 | None:intergenic |
| TCTCTCCATTGAGCATACGA+TGG | 0.695768 | 5.1:+15769500 | MS.gene86479:CDS |
| TAAGCGCCGTTAAGTGACGG+TGG | 0.696353 | 5.1:-15768637 | None:intergenic |
| ATGGTGGCATAGGACCGTAA+CGG | 0.707951 | 5.1:-15769134 | None:intergenic |
| GACTCGTCACTAGCATAACG+AGG | 0.742544 | 5.1:-15769372 | None:intergenic |
| AAGAGGTGGTAAGGTCCACG+TGG | 0.744047 | 5.1:-15768691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAGATTAATATCAAAACT+GGG | + | chr5.1:15769559-15769578 | MS.gene86479:CDS | 20.0% |
| ! | AAACGGAAATAGGTTAAAAA+TGG | - | chr5.1:15769156-15769175 | None:intergenic | 25.0% |
| ! | AATAATCCATGAAAACCATA+CGG | - | chr5.1:15769945-15769964 | None:intergenic | 25.0% |
| ! | ACACAATGTGAAATCATTAA+AGG | + | chr5.1:15768607-15768626 | MS.gene86479:CDS | 25.0% |
| ! | ATTTGTAAGTTTGAACGTAA+CGG | - | chr5.1:15768777-15768796 | None:intergenic | 25.0% |
| ! | GTGAAGATTAATATCAAAAC+TGG | + | chr5.1:15769558-15769577 | MS.gene86479:CDS | 25.0% |
| ! | TTAATGATTTCACATTGTGT+TGG | - | chr5.1:15768607-15768626 | None:intergenic | 25.0% |
| !! | AAAGAATAGGTTTGTTTATG+CGG | + | chr5.1:15769653-15769672 | MS.gene86479:CDS | 25.0% |
| !! | TAAAAAGTATGCTGTGTTTA+CGG | + | chr5.1:15769257-15769276 | MS.gene86479:CDS | 25.0% |
| !!! | TTTTCATGGATTATTTGTGA+AGG | + | chr5.1:15769950-15769969 | MS.gene86479:CDS | 25.0% |
| AAAACACGTTTGGTATAAGT+TGG | - | chr5.1:15768825-15768844 | None:intergenic | 30.0% | |
| ATTACATGGGGAAAAAGAAT+AGG | + | chr5.1:15769640-15769659 | MS.gene86479:CDS | 30.0% | |
| ATTTGCATCAAAACGGAAAT+AGG | - | chr5.1:15769166-15769185 | None:intergenic | 30.0% | |
| GTGATAAATGGTGATTACAT+GGG | + | chr5.1:15769627-15769646 | MS.gene86479:CDS | 30.0% | |
| TAACACCATTTGCATCAAAA+CGG | - | chr5.1:15769173-15769192 | None:intergenic | 30.0% | |
| TAAGCTTGATTTCATAAGGA+AGG | - | chr5.1:15769002-15769021 | None:intergenic | 30.0% | |
| TGATAAATGGTGATTACATG+GGG | + | chr5.1:15769628-15769647 | MS.gene86479:CDS | 30.0% | |
| TGCTTACTTGTCATTATGAT+GGG | - | chr5.1:15768268-15768287 | None:intergenic | 30.0% | |
| TGTTAAACATAACGATGTTC+CGG | + | chr5.1:15769188-15769207 | MS.gene86479:CDS | 30.0% | |
| TTGCTTACTTGTCATTATGA+TGG | - | chr5.1:15768269-15768288 | None:intergenic | 30.0% | |
| ! | TTGATGGATGAGATGTTAAA+GGG | - | chr5.1:15768313-15768332 | None:intergenic | 30.0% |
| ! | TTTGATGGATGAGATGTTAA+AGG | - | chr5.1:15768314-15768333 | None:intergenic | 30.0% |
| !! | CACAGCATACTTTTTAGTAA+TGG | - | chr5.1:15769253-15769272 | None:intergenic | 30.0% |
| !! | TATTTCCGTTTTGATGCAAA+TGG | + | chr5.1:15769165-15769184 | MS.gene86479:CDS | 30.0% |
| !! | TTTTCCGTTTGAGATTGTAA+TGG | - | chr5.1:15768740-15768759 | None:intergenic | 30.0% |
| !!! | TTGTCATTATGATGGGTTTT+GGG | - | chr5.1:15768261-15768280 | None:intergenic | 30.0% |
| !!! | TTGTGGTTTTTTGAGGTTAT+GGG | - | chr5.1:15768443-15768462 | None:intergenic | 30.0% |
| !!! | TTTGTGGTTTTTTGAGGTTA+TGG | - | chr5.1:15768444-15768463 | None:intergenic | 30.0% |
| !!! | TTTTGAGACAAAACATGTCT+TGG | - | chr5.1:15768556-15768575 | None:intergenic | 30.0% |
| AAACAAAGCCAAACTTGTGT+TGG | - | chr5.1:15768947-15768966 | None:intergenic | 35.0% | |
| AACGGTGATATCCAAACAAT+CGG | + | chr5.1:15769027-15769046 | MS.gene86479:CDS | 35.0% | |
| AATCCAATGCCAAAGATTTC+AGG | + | chr5.1:15769684-15769703 | MS.gene86479:CDS | 35.0% | |
| AATCCTCTTGACATGATTTC+TGG | + | chr5.1:15769297-15769316 | MS.gene86479:CDS | 35.0% | |
| AATGTGTTGAGTAGTAATGC+TGG | - | chr5.1:15768481-15768500 | None:intergenic | 35.0% | |
| ACTGCTCATCCTAAAATTGA+CGG | + | chr5.1:15769087-15769106 | MS.gene86479:CDS | 35.0% | |
| ATGATTTCACATTGTGTTGG+AGG | - | chr5.1:15768604-15768623 | None:intergenic | 35.0% | |
| ATGTGTTGAGTAGTAATGCT+GGG | - | chr5.1:15768480-15768499 | None:intergenic | 35.0% | |
| ATTGTTTGGATATCACCGTT+TGG | - | chr5.1:15769027-15769046 | None:intergenic | 35.0% | |
| CCATCAAAAGTTTCAAGGAT+CGG | + | chr5.1:15769342-15769361 | MS.gene86479:CDS | 35.0% | |
| CGGAAATAGGTTAAAAATGG+TGG | - | chr5.1:15769153-15769172 | None:intergenic | 35.0% | |
| GAAATCAAGCTTACACCAAA+CGG | + | chr5.1:15769009-15769028 | MS.gene86479:CDS | 35.0% | |
| GCGAAATCATGAAGAAAAGA+AGG | - | chr5.1:15769231-15769250 | None:intergenic | 35.0% | |
| GGACAATACAATCCTTCTAA+CGG | + | chr5.1:15768910-15768929 | MS.gene86479:CDS | 35.0% | |
| GGTGATAAATGGTGATTACA+TGG | + | chr5.1:15769626-15769645 | MS.gene86479:CDS | 35.0% | |
| GGTGTAAGCTTGATTTCATA+AGG | - | chr5.1:15769006-15769025 | None:intergenic | 35.0% | |
| GTGAAGATAGATGTGTTGAA+AGG | + | chr5.1:15769711-15769730 | MS.gene86479:CDS | 35.0% | |
| GTTTGCCGTTAAAATCTTGA+CGG | - | chr5.1:15769053-15769072 | None:intergenic | 35.0% | |
| TACAAAATCGAAAACGAAGC+TGG | + | chr5.1:15768796-15768815 | MS.gene86479:CDS | 35.0% | |
| TAGGTTAAAAATGGTGGCAT+AGG | - | chr5.1:15769147-15769166 | None:intergenic | 35.0% | |
| TATGTGCATGATGAGAAGAA+GGG | + | chr5.1:15769840-15769859 | MS.gene86479:CDS | 35.0% | |
| TGATTTCACATTGTGTTGGA+GGG | - | chr5.1:15768603-15768622 | None:intergenic | 35.0% | |
| TTATGTGCATGATGAGAAGA+AGG | + | chr5.1:15769839-15769858 | MS.gene86479:CDS | 35.0% | |
| TTGAAACCAGAAAACACGTT+TGG | - | chr5.1:15768835-15768854 | None:intergenic | 35.0% | |
| ! | AAGAAAAGAAGGTCTTGTCA+TGG | - | chr5.1:15769220-15769239 | None:intergenic | 35.0% |
| ! | AGAAGAGGATGATGGTTATT+TGG | + | chr5.1:15769812-15769831 | MS.gene86479:CDS | 35.0% |
| ! | CTTATACCAAACGTGTTTTC+TGG | + | chr5.1:15768826-15768845 | MS.gene86479:CDS | 35.0% |
| ! | GAAACTTTTGCTTTCCGTTA+CGG | + | chr5.1:15769120-15769139 | MS.gene86479:CDS | 35.0% |
| ! | GGTAACAAACTTTTTGCGTT+AGG | + | chr5.1:15768967-15768986 | MS.gene86479:CDS | 35.0% |
| ! | TGTTTGGGATTGTGATGTTT+GGG | - | chr5.1:15768350-15768369 | None:intergenic | 35.0% |
| !! | AACACAAGTTTGGCTTTGTT+TGG | + | chr5.1:15768946-15768965 | MS.gene86479:CDS | 35.0% |
| !! | CCTTGAAACTTTTGATGGAT+CGG | - | chr5.1:15769340-15769359 | None:intergenic | 35.0% |
| !! | TGATGTTTGGGGTTTTTCTT+TGG | - | chr5.1:15768338-15768357 | None:intergenic | 35.0% |
| !! | TTTTATTGGTGGGTCTATGA+AGG | - | chr5.1:15768521-15768540 | None:intergenic | 35.0% |
| !!! | ATGGTGTTTGTGGTTTTTTG+AGG | - | chr5.1:15768450-15768469 | None:intergenic | 35.0% |
| !!! | CTACAGATGGTTTTATTGGT+GGG | - | chr5.1:15768531-15768550 | None:intergenic | 35.0% |
| !!! | CTTGTCATTATGATGGGTTT+TGG | - | chr5.1:15768262-15768281 | None:intergenic | 35.0% |
| !!! | GGATCTACAGATGGTTTTAT+TGG | - | chr5.1:15768535-15768554 | None:intergenic | 35.0% |
| !!! | GGGTTTTTCTTTGGTTTTGA+TGG | - | chr5.1:15768329-15768348 | None:intergenic | 35.0% |
| !!! | TCTACAGATGGTTTTATTGG+TGG | - | chr5.1:15768532-15768551 | None:intergenic | 35.0% |
| AACGGCGCTTACATAAGAAA+TGG | + | chr5.1:15768649-15768668 | MS.gene86479:CDS | 40.0% | |
| AATGCCAAAGATTTCAGGAG+TGG | + | chr5.1:15769689-15769708 | MS.gene86479:CDS | 40.0% | |
| ACATGTCTTGGATCTACAGA+TGG | - | chr5.1:15768544-15768563 | None:intergenic | 40.0% | |
| ACTCCTGAAATCTTTGGCAT+TGG | - | chr5.1:15769690-15769709 | None:intergenic | 40.0% | |
| ATGGATGAGATGTTAAAGGG+AGG | - | chr5.1:15768310-15768329 | None:intergenic | 40.0% | |
| CACGCCATTACAATCTCAAA+CGG | + | chr5.1:15768733-15768752 | MS.gene86479:CDS | 40.0% | |
| CATTTATCACCCCGAAATCT+AGG | - | chr5.1:15769617-15769636 | None:intergenic | 40.0% | |
| CCGATCCATCAAAAGTTTCA+AGG | + | chr5.1:15769337-15769356 | MS.gene86479:CDS | 40.0% | |
| CTAGATTTCGGGGTGATAAA+TGG | + | chr5.1:15769615-15769634 | MS.gene86479:CDS | 40.0% | |
| GAAGTTGGATGTAGGTTGTA+TGG | + | chr5.1:15769738-15769757 | MS.gene86479:CDS | 40.0% | |
| GATAGATGTGTTGAAAGGTG+AGG | + | chr5.1:15769716-15769735 | MS.gene86479:CDS | 40.0% | |
| GCGTGCATGATATTAAATCC+CGG | - | chr5.1:15769420-15769439 | None:intergenic | 40.0% | |
| GTGTTTACGGATATTCAGCT+TGG | + | chr5.1:15769270-15769289 | MS.gene86479:CDS | 40.0% | |
| TACAATCCTTCTAACGGCAT+TGG | + | chr5.1:15768916-15768935 | MS.gene86479:CDS | 40.0% | |
| TGCTCAATGGAGAGAACATT+CGG | - | chr5.1:15769495-15769514 | None:intergenic | 40.0% | |
| TGGATGAGATGTTAAAGGGA+GGG | - | chr5.1:15768309-15768328 | None:intergenic | 40.0% | |
| TGGTTTAGCCAACACAAGTT+TGG | + | chr5.1:15768936-15768955 | MS.gene86479:CDS | 40.0% | |
| TTCACCACTCCTGAAATCTT+TGG | - | chr5.1:15769696-15769715 | None:intergenic | 40.0% | |
| TTGTATGGAGAGGGTTGTTA+TGG | + | chr5.1:15769753-15769772 | MS.gene86479:CDS | 40.0% | |
| ! | AGGTTTGTTTATGCGGCAAT+TGG | + | chr5.1:15769660-15769679 | MS.gene86479:CDS | 40.0% |
| ! | ATCGGCCGTCAAGATTTTAA+CGG | + | chr5.1:15769045-15769064 | MS.gene86479:CDS | 40.0% |
| ! | CCGATCCTTGAAACTTTTGA+TGG | - | chr5.1:15769345-15769364 | None:intergenic | 40.0% |
| ! | GGTGTAGGAAGAGTTTTTGT+GGG | - | chr5.1:15768397-15768416 | None:intergenic | 40.0% |
| ! | GGTTTGTTTATGCGGCAATT+GGG | + | chr5.1:15769661-15769680 | MS.gene86479:CDS | 40.0% |
| ! | GTGTAGGAAGAGTTTTTGTG+GGG | - | chr5.1:15768396-15768415 | None:intergenic | 40.0% |
| ! | GTGTTTGGGATTGTGATGTT+TGG | - | chr5.1:15768351-15768370 | None:intergenic | 40.0% |
| ! | GTTTGGGATTGTGATGTTTG+GGG | - | chr5.1:15768349-15768368 | None:intergenic | 40.0% |
| ! | TGTAGGAAGAGTTTTTGTGG+GGG | - | chr5.1:15768395-15768414 | None:intergenic | 40.0% |
| !!! | AGAGTCAAGGTTTTTGGTGA+TGG | + | chr5.1:15769863-15769882 | MS.gene86479:CDS | 40.0% |
| !!! | GGTGGTGGTTTTTAGTGTTT+GGG | - | chr5.1:15768365-15768384 | None:intergenic | 40.0% |
| !!! | TGGTGGTGGTTTTTAGTGTT+TGG | - | chr5.1:15768366-15768385 | None:intergenic | 40.0% |
| !!! | TGGTTTTTTGAGGTTATGGG+TGG | - | chr5.1:15768440-15768459 | None:intergenic | 40.0% |
| !!! | TTTTTTGAGGTTATGGGTGG+TGG | - | chr5.1:15768437-15768456 | None:intergenic | 40.0% |
| AAGGGAGGGATAGAAGTTGT+TGG | - | chr5.1:15768295-15768314 | None:intergenic | 45.0% | |
| AAGGTGAGGAAGTTGGATGT+AGG | + | chr5.1:15769730-15769749 | MS.gene86479:CDS | 45.0% | |
| AATCTTGACGGCCGATTGTT+TGG | - | chr5.1:15769041-15769060 | None:intergenic | 45.0% | |
| ACACTTCCACCGTCACTTAA+CGG | + | chr5.1:15768631-15768650 | MS.gene86479:CDS | 45.0% | |
| AGGATGAGCAGTCATACTCA+TGG | - | chr5.1:15769079-15769098 | None:intergenic | 45.0% | |
| AGTAATGCTGGGAGTGATGA+TGG | - | chr5.1:15768469-15768488 | None:intergenic | 45.0% | |
| ATGAAATGGTTCGATGTGCC+GGG | + | chr5.1:15769399-15769418 | MS.gene86479:CDS | 45.0% | |
| ATGAGAAGAAGGGAGAGTCA+AGG | + | chr5.1:15769850-15769869 | MS.gene86479:CDS | 45.0% | |
| CCACCAGAAATCATGTCAAG+AGG | - | chr5.1:15769303-15769322 | None:intergenic | 45.0% | |
| GAGTGACATCACCAAGTTGT+CGG | + | chr5.1:15769974-15769993 | MS.gene86479:CDS | 45.0% | |
| GATGAAATGGTTCGATGTGC+CGG | + | chr5.1:15769398-15769417 | MS.gene86479:CDS | 45.0% | |
| GATGGTGAAGAAGAGGATGA+TGG | + | chr5.1:15769804-15769823 | MS.gene86479:CDS | 45.0% | |
| GCTAAACCAATGCCGTTAGA+AGG | - | chr5.1:15768925-15768944 | None:intergenic | 45.0% | |
| GGATGTAGGTTGTATGGAGA+GGG | + | chr5.1:15769744-15769763 | MS.gene86479:CDS | 45.0% | |
| GTGACGAGTCGAAGATGAAA+TGG | + | chr5.1:15769385-15769404 | MS.gene86479:CDS | 45.0% | |
| GTGTTGAAAGGTGAGGAAGT+TGG | + | chr5.1:15769723-15769742 | MS.gene86479:CDS | 45.0% | |
| TATGGAGAGGGTTGTTATGG+TGG | + | chr5.1:15769756-15769775 | MS.gene86479:CDS | 45.0% | |
| TCAGCGCGAAACCTAGATTT+CGG | + | chr5.1:15769603-15769622 | MS.gene86479:CDS | 45.0% | |
| TCTCTCCATCGTATGCTCAA+TGG | - | chr5.1:15769508-15769527 | None:intergenic | 45.0% | |
| TCTCTCCATTGAGCATACGA+TGG | + | chr5.1:15769500-15769519 | MS.gene86479:CDS | 45.0% | |
| TGGATGTAGGTTGTATGGAG+AGG | + | chr5.1:15769743-15769762 | MS.gene86479:CDS | 45.0% | |
| ! | ATGTAAGCGCCGTTAAGTGA+CGG | - | chr5.1:15768643-15768662 | None:intergenic | 45.0% |
| ! | CCTCTTGACATGATTTCTGG+TGG | + | chr5.1:15769300-15769319 | MS.gene86479:CDS | 45.0% |
| ! | GAAGGGAGAGTCAAGGTTTT+TGG | + | chr5.1:15769857-15769876 | MS.gene86479:CDS | 45.0% |
| ! | GGGTGTAGGAAGAGTTTTTG+TGG | - | chr5.1:15768398-15768417 | None:intergenic | 45.0% |
| ! | GGTCTTGTCATGGAGAAAAC+CGG | - | chr5.1:15769210-15769229 | None:intergenic | 45.0% |
| ! | GTAGGAAGAGTTTTTGTGGG+GGG | - | chr5.1:15768394-15768413 | None:intergenic | 45.0% |
| ! | TCTAGGTTTCGCGCTGATAA+TGG | - | chr5.1:15769600-15769619 | None:intergenic | 45.0% |
| ! | TTTGATGGATCGGAACCTAC+TGG | - | chr5.1:15769330-15769349 | None:intergenic | 45.0% |
| !! | ATTTCTGGTGGTTCTCCAGT+AGG | + | chr5.1:15769312-15769331 | MS.gene86479:CDS | 45.0% |
| AACCCACAGTTTCTTCCACG+TGG | + | chr5.1:15768676-15768695 | MS.gene86479:CDS | 50.0% | |
| AACGTAACGGCTACAGAGTG+TGG | - | chr5.1:15768764-15768783 | None:intergenic | 50.0% | |
| AGCGCGAAACCTAGATTTCG+GGG | + | chr5.1:15769605-15769624 | MS.gene86479:CDS | 50.0% | |
| ATGGTGGCATAGGACCGTAA+CGG | - | chr5.1:15769137-15769156 | None:intergenic | 50.0% | |
| CAGCGCGAAACCTAGATTTC+GGG | + | chr5.1:15769604-15769623 | MS.gene86479:CDS | 50.0% | |
| CCTAAAATTGACGGCGACAC+TGG | + | chr5.1:15769096-15769115 | MS.gene86479:CDS | 50.0% | |
| CGTGGAAGAAACTGTGGGTT+TGG | - | chr5.1:15768676-15768695 | None:intergenic | 50.0% | |
| CTTATAGCTTCTGCTGCACG+TGG | + | chr5.1:15768859-15768878 | MS.gene86479:CDS | 50.0% | |
| GACTCGTCACTAGCATAACG+AGG | - | chr5.1:15769375-15769394 | None:intergenic | 50.0% | |
| GGAGGGATAGAAGTTGTTGG+TGG | - | chr5.1:15768292-15768311 | None:intergenic | 50.0% | |
| GTCCACGTGGAAGAAACTGT+GGG | - | chr5.1:15768681-15768700 | None:intergenic | 50.0% | |
| GTGTTGGAGGGAGTTCATCT+AGG | - | chr5.1:15768591-15768610 | None:intergenic | 50.0% | |
| TCCAGATATGACACGTGCTG+CGG | - | chr5.1:15768893-15768912 | None:intergenic | 50.0% | |
| TCCGCCACAATCTCAAACTC+CGG | - | chr5.1:15769900-15769919 | None:intergenic | 50.0% | |
| ! | CCAGTGTCGCCGTCAATTTT+AGG | - | chr5.1:15769099-15769118 | None:intergenic | 50.0% |
| ! | TTTGAGGTTATGGGTGGTGG+TGG | - | chr5.1:15768434-15768453 | None:intergenic | 50.0% |
| !! | AGTTTTTGTGGGGGGTGTAG+TGG | - | chr5.1:15768386-15768405 | None:intergenic | 50.0% |
| !! | GGGAGTGATGATGGTGTTTG+TGG | - | chr5.1:15768460-15768479 | None:intergenic | 50.0% |
| !!! | AGGGTGCCGTATGGTTTTCA+TGG | + | chr5.1:15769936-15769955 | MS.gene86479:CDS | 50.0% |
| AAACCATACGGCACCCTCCT+TGG | - | chr5.1:15769933-15769952 | None:intergenic | 55.0% | |
| AAGAGGTGGTAAGGTCCACG+TGG | - | chr5.1:15768694-15768713 | None:intergenic | 55.0% | |
| ACCGCAGCACGTGTCATATC+TGG | + | chr5.1:15768889-15768908 | MS.gene86479:CDS | 55.0% | |
| ACGCGATCAATGCGTGGGAT+GGG | + | chr5.1:15769436-15769455 | MS.gene86479:CDS | 55.0% | |
| CATGCACGCGATCAATGCGT+GGG | + | chr5.1:15769431-15769450 | MS.gene86479:CDS | 55.0% | |
| GAGGGAGGATGGTGAAGAAG+AGG | + | chr5.1:15769797-15769816 | MS.gene86479:CDS | 55.0% | |
| GGACCTTACCACCTCTTCGA+CGG | + | chr5.1:15768697-15768716 | MS.gene86479:CDS | 55.0% | |
| GGAGGTGAAGTTGCCAAGGA+GGG | + | chr5.1:15769917-15769936 | MS.gene86479:CDS | 55.0% | |
| GGTCCACGTGGAAGAAACTG+TGG | - | chr5.1:15768682-15768701 | None:intergenic | 55.0% | |
| GTGGGATGGGGAAGATGATG+AGG | + | chr5.1:15769449-15769468 | MS.gene86479:CDS | 55.0% | |
| TACCACCTCTTCGACGGTGA+TGG | + | chr5.1:15768703-15768722 | MS.gene86479:CDS | 55.0% | |
| TATGACACGTGCTGCGGTGA+CGG | - | chr5.1:15768887-15768906 | None:intergenic | 55.0% | |
| TCACCGTCGAAGAGGTGGTA+AGG | - | chr5.1:15768703-15768722 | None:intergenic | 55.0% | |
| TCATGCACGCGATCAATGCG+TGG | + | chr5.1:15769430-15769449 | MS.gene86479:CDS | 55.0% | |
| TCCTCCCTCGCCACGAAAAA+CGG | - | chr5.1:15769786-15769805 | None:intergenic | 55.0% | |
| ! | GCCGGAGTTTGAGATTGTGG+CGG | + | chr5.1:15769896-15769915 | MS.gene86479:CDS | 55.0% |
| ! | GGAGGGAGTTCATCTAGGAC+TGG | - | chr5.1:15768586-15768605 | None:intergenic | 55.0% |
| ! | GGAGTTTGAGATTGTGGCGG+AGG | + | chr5.1:15769899-15769918 | MS.gene86479:CDS | 55.0% |
| ! | GTCGCCGGAGTTTGAGATTG+TGG | + | chr5.1:15769893-15769912 | MS.gene86479:CDS | 55.0% |
| ! | TAAGCGCCGTTAAGTGACGG+TGG | - | chr5.1:15768640-15768659 | None:intergenic | 55.0% |
| ! | TTTTTCGTGGCGAGGGAGGA+TGG | + | chr5.1:15769786-15769805 | MS.gene86479:CDS | 55.0% |
| !! | TTTTGTGGGGGGTGTAGTGG+TGG | - | chr5.1:15768383-15768402 | None:intergenic | 55.0% |
| !!! | TGAGCCGTTTTTCGTGGCGA+GGG | + | chr5.1:15769779-15769798 | MS.gene86479:CDS | 55.0% |
| !!! | TGGTGGTGAGCCGTTTTTCG+TGG | + | chr5.1:15769773-15769792 | MS.gene86479:CDS | 55.0% |
| CACGCGATCAATGCGTGGGA+TGG | + | chr5.1:15769435-15769454 | MS.gene86479:CDS | 60.0% | |
| CGCGATCAATGCGTGGGATG+GGG | + | chr5.1:15769437-15769456 | MS.gene86479:CDS | 60.0% | |
| CGGAGGTGAAGTTGCCAAGG+AGG | + | chr5.1:15769916-15769935 | MS.gene86479:CDS | 60.0% | |
| GCATGCCATCACCGTCGAAG+AGG | - | chr5.1:15768711-15768730 | None:intergenic | 60.0% | |
| TGCCATCACCGTCGAAGAGG+TGG | - | chr5.1:15768708-15768727 | None:intergenic | 60.0% | |
| TGGCGGAGGTGAAGTTGCCA+AGG | + | chr5.1:15769913-15769932 | MS.gene86479:CDS | 60.0% | |
| !! | GAGGTTATGGGTGGTGGTGG+TGG | - | chr5.1:15768431-15768450 | None:intergenic | 60.0% |
| !! | GGTGATGGATGCGAAGTCGC+CGG | + | chr5.1:15769878-15769897 | MS.gene86479:CDS | 60.0% |
| !! | GTTATGGGTGGTGGTGGTGG+TGG | - | chr5.1:15768428-15768447 | None:intergenic | 60.0% |
| !! | TTGCCAAGGAGGGTGCCGTA+TGG | + | chr5.1:15769927-15769946 | MS.gene86479:CDS | 60.0% |
| !!! | GTGAGCCGTTTTTCGTGGCG+AGG | + | chr5.1:15769778-15769797 | MS.gene86479:CDS | 60.0% |
| ! | TGTGGGGGGTGTAGTGGTGG+TGG | - | chr5.1:15768380-15768399 | None:intergenic | 65.0% |
| !! | ATGGGTGGTGGTGGTGGTGG+TGG | - | chr5.1:15768425-15768444 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGT+GGG | - | chr5.1:15768421-15768440 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGTGGTGGTG+GGG | - | chr5.1:15768420-15768439 | None:intergenic | 65.0% |
| !!! | GCCGTTTTTCGTGGCGAGGG+AGG | + | chr5.1:15769782-15769801 | MS.gene86479:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+GGG | - | chr5.1:15768419-15768438 | None:intergenic | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr5.1:15768419-15768438 | None:intergenic | 70.0% |
| !! | GTGGTGGTGGTGGGGGGTGT+AGG | - | chr5.1:15768412-15768431 | None:intergenic | 70.0% |
| !! | GTGGTGGTGGTGGTGGTGGG+GGG | - | chr5.1:15768418-15768437 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 15768253 | 15770004 | 15768253 | ID=MS.gene86479 |
| chr5.1 | mRNA | 15768253 | 15770004 | 15768253 | ID=MS.gene86479.t1;Parent=MS.gene86479 |
| chr5.1 | exon | 15768253 | 15768280 | 15768253 | ID=MS.gene86479.t1.exon1;Parent=MS.gene86479.t1 |
| chr5.1 | CDS | 15768253 | 15768280 | 15768253 | ID=cds.MS.gene86479.t1;Parent=MS.gene86479.t1 |
| chr5.1 | exon | 15768527 | 15770004 | 15768527 | ID=MS.gene86479.t1.exon2;Parent=MS.gene86479.t1 |
| chr5.1 | CDS | 15768527 | 15770004 | 15768527 | ID=cds.MS.gene86479.t1;Parent=MS.gene86479.t1 |
| Gene Sequence |
| Protein sequence |
