Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071643.t1 | XP_004500761.1 | 66.9 | 577 | 90 | 7 | 1 | 485 | 1 | 568 | 2.10E-193 | 685.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071643.t1 | Q9STG9 | 68.8 | 487 | 63 | 3 | 72 | 471 | 68 | 552 | 6.0e-181 | 635.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071643.t1 | A0A1S2Y7W2 | 66.9 | 577 | 90 | 7 | 1 | 485 | 1 | 568 | 1.5e-193 | 685.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene071643 | 0.887509 | 1.34E-72 | -1.69E-46 |
| MS.gene049217 | MS.gene071643 | 0.835735 | 1.41E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene071643 | 0.862224 | 5.90E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene071643 | 0.835569 | 1.55E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene071643 | 0.88141 | 2.46E-70 | -1.69E-46 |
| MS.gene049320 | MS.gene071643 | 0.865995 | 3.94E-65 | -1.69E-46 |
| MS.gene049609 | MS.gene071643 | 0.838525 | 2.73E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene071643 | 0.873723 | 1.18E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene071643 | 0.857423 | 1.65E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene071643 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene071643 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene071643 | 0.903291 | 4.04E-79 | -1.69E-46 |
| MS.gene050323 | MS.gene071643 | 0.894183 | 3.13E-75 | -1.69E-46 |
| MS.gene050333 | MS.gene071643 | 0.800798 | 1.22E-48 | -1.69E-46 |
| MS.gene050338 | MS.gene071643 | -0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene071643 | 0.850843 | 1.31E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene071643 | 0.897236 | 1.71E-76 | -1.69E-46 |
| MS.gene050504 | MS.gene071643 | 0.875155 | 3.85E-68 | -1.69E-46 |
| MS.gene050518 | MS.gene071643 | 0.837749 | 4.33E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene071643 | 0.817537 | 3.13E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene071643 | 0.877654 | 5.28E-69 | -1.69E-46 |
| MS.gene050593 | MS.gene071643 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene071643 | 0.879296 | 1.40E-69 | -1.69E-46 |
| MS.gene050675 | MS.gene071643 | 0.869567 | 2.81E-66 | -1.69E-46 |
| MS.gene050697 | MS.gene071643 | 0.820895 | 5.39E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene071643 | 0.875478 | 2.99E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene071643 | 0.836194 | 1.08E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene071643 | 0.859781 | 3.26E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene071643 | 0.856987 | 2.22E-62 | -1.69E-46 |
| MS.gene05081 | MS.gene071643 | 0.848819 | 4.81E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene071643 | 0.891069 | 5.56E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene071643 | 0.891008 | 5.88E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene071643 | 0.808659 | 2.78E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene071643 | 0.859955 | 2.89E-63 | -1.69E-46 |
| MS.gene050950 | MS.gene071643 | 0.832337 | 1.00E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene071643 | 0.864988 | 8.18E-65 | -1.69E-46 |
| MS.gene051268 | MS.gene071643 | 0.850694 | 1.44E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene071643 | 0.875538 | 2.85E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene071643 | 0.837934 | 3.88E-57 | -1.69E-46 |
| MS.gene051651 | MS.gene071643 | -0.823925 | 1.07E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene071643 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene071643 | 0.829326 | 5.48E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene071643 | 0.881921 | 1.61E-70 | -1.69E-46 |
| MS.gene051858 | MS.gene071643 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene051874 | MS.gene071643 | 0.820979 | 5.15E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene071643 | 0.836996 | 6.74E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene071643 | 0.808686 | 2.74E-50 | -1.69E-46 |
| MS.gene052129 | MS.gene071643 | -0.816874 | 4.42E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene071643 | 0.857656 | 1.41E-62 | -1.69E-46 |
| MS.gene052318 | MS.gene071643 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene071643 | 0.846249 | 2.45E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene071643 | 0.849623 | 2.87E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene071643 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene071643 | 0.89317 | 8.07E-75 | -1.69E-46 |
| MS.gene052504 | MS.gene071643 | 0.837015 | 6.67E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene071643 | 0.871348 | 7.32E-67 | -1.69E-46 |
| MS.gene052615 | MS.gene071643 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene052820 | MS.gene071643 | 0.814247 | 1.70E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene071643 | 0.878496 | 2.68E-69 | -1.69E-46 |
| MS.gene052823 | MS.gene071643 | 0.890939 | 6.25E-74 | -1.69E-46 |
| MS.gene052825 | MS.gene071643 | 0.891263 | 4.66E-74 | -1.69E-46 |
| MS.gene052870 | MS.gene071643 | 0.844081 | 9.43E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene071643 | 0.863923 | 1.76E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene071643 | 0.850821 | 1.33E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene071643 | 0.875003 | 4.34E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene071643 | 0.823872 | 1.10E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene071643 | 0.833568 | 4.95E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene071643 | 0.837349 | 5.48E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene071643 | 0.826286 | 2.95E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene071643 | 0.880983 | 3.50E-70 | -1.69E-46 |
| MS.gene053480 | MS.gene071643 | 0.891194 | 4.96E-74 | -1.69E-46 |
| MS.gene053574 | MS.gene071643 | 0.841463 | 4.68E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene071643 | 0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene071643 | 0.856407 | 3.28E-62 | -1.69E-46 |
| MS.gene053633 | MS.gene071643 | 0.818517 | 1.88E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene071643 | 0.907026 | 7.90E-81 | -1.69E-46 |
| MS.gene053916 | MS.gene071643 | 0.842906 | 1.94E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene071643 | 0.824495 | 7.83E-54 | -1.69E-46 |
| MS.gene054344 | MS.gene071643 | 0.87637 | 1.47E-68 | -1.69E-46 |
| MS.gene054408 | MS.gene071643 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene071643 | 0.853257 | 2.69E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene071643 | 0.859578 | 3.75E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene071643 | 0.849927 | 2.36E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene071643 | -0.847299 | 1.26E-59 | -1.69E-46 |
| MS.gene05470 | MS.gene071643 | 0.871596 | 6.06E-67 | -1.69E-46 |
| MS.gene054884 | MS.gene071643 | -0.811661 | 6.26E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene071643 | 0.836763 | 7.73E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene071643 | 0.884714 | 1.51E-71 | -1.69E-46 |
| MS.gene055206 | MS.gene071643 | 0.837846 | 4.08E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene071643 | 0.837007 | 6.70E-57 | -1.69E-46 |
| MS.gene055251 | MS.gene071643 | -0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene071643 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene071643 | 0.868211 | 7.73E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene071643 | 0.88147 | 2.34E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene071643 | 0.897703 | 1.09E-76 | -1.69E-46 |
| MS.gene055722 | MS.gene071643 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene071643 | 0.860878 | 1.52E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene071643 | 0.869313 | 3.40E-66 | -1.69E-46 |
| MS.gene055751 | MS.gene071643 | 0.868641 | 5.61E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene071643 | 0.84091 | 6.54E-58 | -1.69E-46 |
| MS.gene05589 | MS.gene071643 | 0.889324 | 2.68E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene071643 | 0.858891 | 6.03E-63 | -1.69E-46 |
| MS.gene056046 | MS.gene071643 | 0.847408 | 1.18E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene071643 | 0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene071643 | -0.810243 | 1.27E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene071643 | 0.802824 | 4.67E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene071643 | 0.877638 | 5.35E-69 | -1.69E-46 |
| MS.gene056446 | MS.gene071643 | 0.818295 | 2.11E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene071643 | 0.90127 | 3.18E-78 | -1.69E-46 |
| MS.gene056510 | MS.gene071643 | 0.891047 | 5.67E-74 | -1.69E-46 |
| MS.gene056618 | MS.gene071643 | -0.803871 | 2.83E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene071643 | 0.872196 | 3.83E-67 | -1.69E-46 |
| MS.gene056692 | MS.gene071643 | 0.84032 | 9.33E-58 | -1.69E-46 |
| MS.gene056694 | MS.gene071643 | -0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene071643 | 0.828146 | 1.06E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene071643 | 0.861448 | 1.02E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene071643 | 0.81706 | 4.01E-52 | -1.69E-46 |
| MS.gene057332 | MS.gene071643 | 0.823111 | 1.65E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene071643 | 0.810829 | 9.49E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene071643 | 0.859285 | 4.60E-63 | -1.69E-46 |
| MS.gene057734 | MS.gene071643 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene071643 | 0.843242 | 1.58E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene071643 | 0.833805 | 4.32E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene071643 | 0.851598 | 7.99E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene071643 | 0.839883 | 1.21E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene071643 | 0.816758 | 4.69E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene071643 | 0.820272 | 7.49E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene071643 | -0.839587 | 1.45E-57 | -1.69E-46 |
| MS.gene058338 | MS.gene071643 | 0.849584 | 2.95E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene071643 | 0.864727 | 9.88E-65 | -1.69E-46 |
| MS.gene058382 | MS.gene071643 | -0.845849 | 3.14E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene071643 | 0.878875 | 1.97E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene071643 | 0.855122 | 7.80E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene071643 | 0.826328 | 2.88E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene071643 | 0.839434 | 1.59E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene071643 | 0.864823 | 9.21E-65 | -1.69E-46 |
| MS.gene058853 | MS.gene071643 | -0.802544 | 5.34E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene071643 | 0.866873 | 2.07E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene071643 | 0.912457 | 1.91E-83 | -1.69E-46 |
| MS.gene05913 | MS.gene071643 | 0.831893 | 1.29E-55 | -1.69E-46 |
| MS.gene05914 | MS.gene071643 | 0.827386 | 1.61E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene071643 | -0.824717 | 6.94E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene071643 | 0.815548 | 8.74E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene071643 | 0.809914 | 1.49E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene071643 | 0.832995 | 6.88E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene071643 | 0.873678 | 1.22E-67 | -1.69E-46 |
| MS.gene059699 | MS.gene071643 | -0.840366 | 9.08E-58 | -1.69E-46 |
| MS.gene059701 | MS.gene071643 | -0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene071643 | -0.841083 | 5.89E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene071643 | 0.851183 | 1.05E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene071643 | 0.847061 | 1.47E-59 | -1.69E-46 |
| MS.gene059837 | MS.gene071643 | 0.834701 | 2.57E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene071643 | 0.885412 | 8.32E-72 | -1.69E-46 |
| MS.gene06000 | MS.gene071643 | 0.885188 | 1.01E-71 | -1.69E-46 |
| MS.gene06027 | MS.gene071643 | 0.82211 | 2.82E-53 | -1.69E-46 |
| MS.gene060405 | MS.gene071643 | -0.800327 | 1.52E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene071643 | -0.801512 | 8.69E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene071643 | 0.857304 | 1.79E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene071643 | 0.862591 | 4.55E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene071643 | 0.866981 | 1.92E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene071643 | 0.870026 | 1.99E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene071643 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene071643 | 0.843959 | 1.02E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene071643 | 0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene071643 | 0.906327 | 1.67E-80 | -1.69E-46 |
| MS.gene061044 | MS.gene071643 | -0.822417 | 2.40E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene071643 | 0.829732 | 4.37E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071643.t1 | MTR_3g117590 | 68.622 | 392 | 38 | 5 | 139 | 460 | 27 | 403 | 5.03e-171 | 488 |
| MS.gene071643.t1 | MTR_4g072110 | 72.581 | 310 | 65 | 6 | 1 | 305 | 1 | 295 | 3.16e-143 | 422 |
| MS.gene071643.t1 | MTR_4g072110 | 86.228 | 167 | 21 | 1 | 306 | 472 | 382 | 546 | 3.25e-93 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071643.t1 | AT4G34740 | 84.255 | 235 | 36 | 1 | 72 | 305 | 68 | 302 | 5.16e-139 | 412 |
| MS.gene071643.t1 | AT4G34740 | 82.036 | 167 | 28 | 1 | 306 | 472 | 389 | 553 | 2.87e-88 | 281 |
| MS.gene071643.t1 | AT2G16570 | 85.022 | 227 | 34 | 0 | 79 | 305 | 80 | 306 | 1.92e-138 | 410 |
| MS.gene071643.t1 | AT2G16570 | 83.832 | 167 | 26 | 1 | 306 | 472 | 393 | 558 | 3.67e-89 | 283 |
| MS.gene071643.t1 | AT4G38880 | 59.554 | 314 | 114 | 4 | 12 | 323 | 9 | 311 | 1.20e-120 | 363 |
| MS.gene071643.t1 | AT4G38880 | 74.324 | 148 | 37 | 1 | 305 | 451 | 378 | 525 | 6.28e-70 | 232 |
Find 105 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGGGTCTTGTTATTA+TGG | 0.169325 | 3.3:+95539374 | MS.gene071643:CDS |
| ATCTTCATCTCTTTCTGATT+TGG | 0.180718 | 3.3:-95539653 | None:intergenic |
| TCACAGAAGATTAGAGATTT+TGG | 0.203480 | 3.3:+95539191 | MS.gene071643:CDS |
| ATTGCATGTCCACCAATTAT+TGG | 0.249163 | 3.3:+95539359 | MS.gene071643:CDS |
| GGTTTATCCTGGTGAAATTA+TGG | 0.280156 | 3.3:+95538866 | MS.gene071643:CDS |
| TCAACAATTCTCGCTATAAA+AGG | 0.280350 | 3.3:-95538663 | None:intergenic |
| GATGAGTGTGGCTGAGATTA+AGG | 0.284060 | 3.3:+95539436 | MS.gene071643:CDS |
| GTGAATGGGAATGTGTTGTT+AGG | 0.284914 | 3.3:-95538171 | None:intergenic |
| TCTTCATCTCTTTCTGATTT+GGG | 0.291726 | 3.3:-95539652 | None:intergenic |
| AGAAATGAACTTGAAGAATC+TGG | 0.293200 | 3.3:+95538573 | MS.gene071643:CDS |
| TAATAACAAGACCCAATAAT+TGG | 0.293975 | 3.3:-95539371 | None:intergenic |
| TAGCAGAGACGAGAGGCTTC+TGG | 0.302805 | 3.3:-95538267 | None:intergenic |
| GCTGAGATTAAGGAATTTAT+TGG | 0.318852 | 3.3:+95539446 | MS.gene071643:CDS |
| CCGGTTCGTGCTGTTCTTGA+AGG | 0.320056 | 3.3:+95539233 | MS.gene071643:CDS |
| TTCTGTTATGCTTGTTTCAC+TGG | 0.324666 | 3.3:+95539536 | MS.gene071643:CDS |
| TGTGTTGTTAGGGTTGTTAT+TGG | 0.329634 | 3.3:-95538160 | None:intergenic |
| TTGCATGTCCACCAATTATT+GGG | 0.345820 | 3.3:+95539360 | MS.gene071643:CDS |
| AGAATGAGAAGGTGAGGTTT+TGG | 0.352465 | 3.3:-95538112 | None:intergenic |
| CAGAAAGAGATGAAGATTGT+TGG | 0.354775 | 3.3:+95539659 | MS.gene071643:CDS |
| CTGAAGAGTTGATATCTAAT+AGG | 0.367246 | 3.3:+95539414 | MS.gene071643:CDS |
| GTTGCTGTCAGAGATCCTTT+TGG | 0.373947 | 3.3:+95538744 | MS.gene071643:CDS |
| TTTGTTGCAGGTTACCGTTT+TGG | 0.378465 | 3.3:+95538501 | MS.gene071643:CDS |
| TTTAGGTTTGTTGAGGGAAG+AGG | 0.397497 | 3.3:-95538004 | None:intergenic |
| TGACCAATGGCTAAGTTTCC+AGG | 0.397946 | 3.3:-95538429 | None:intergenic |
| TTAAGTTCAGTAGGTTCAAC+AGG | 0.399551 | 3.3:-95539566 | None:intergenic |
| TGGTTTGAAGGACTTTGTTA+TGG | 0.401995 | 3.3:-95538350 | None:intergenic |
| GTGCTGTTCTTGAAGGGAAA+AGG | 0.407251 | 3.3:+95539240 | MS.gene071643:CDS |
| CGTGAAGAATGTGGCGTTGT+TGG | 0.421219 | 3.3:+95538231 | MS.gene071643:CDS |
| AAAGTCCTTCAAACCATTAC+CGG | 0.424078 | 3.3:+95538357 | MS.gene071643:CDS |
| TGAATGGGAATGTGTTGTTA+GGG | 0.428275 | 3.3:-95538170 | None:intergenic |
| AAGGACTTTGTTATGGTTGA+CGG | 0.431778 | 3.3:-95538343 | None:intergenic |
| AGAGAGTTTAGGTTTGTTGA+GGG | 0.448031 | 3.3:-95538010 | None:intergenic |
| TCCGTTGGTGTTGCTCATAA+TGG | 0.454130 | 3.3:+95538525 | MS.gene071643:CDS |
| CTTAAAGTTAAGAAGAGGAT+TGG | 0.456503 | 3.3:+95539584 | MS.gene071643:CDS |
| ATTGGTGGTGATTCTGTGGA+TGG | 0.464638 | 3.3:+95539602 | MS.gene071643:CDS |
| TAGCGGCGATGTTTGTGAAT+GGG | 0.471858 | 3.3:-95538185 | None:intergenic |
| AACGAGGCCAACGCCGGTAA+TGG | 0.479513 | 3.3:-95538370 | None:intergenic |
| ACAAAACTCCGTCAATTACC+TGG | 0.480200 | 3.3:+95538411 | MS.gene071643:CDS |
| GGATAGTTTGAAGAAGTTGT+TGG | 0.482382 | 3.3:+95539496 | MS.gene071643:CDS |
| TCTGTGGATGGTGGATTGAA+TGG | 0.487961 | 3.3:+95539614 | MS.gene071643:CDS |
| TGCTGTTCTTGAAGGGAAAA+GGG | 0.491594 | 3.3:+95539241 | MS.gene071643:CDS |
| GTTGAGGGAAGAGGAAGAGA+GGG | 0.493244 | 3.3:-95537995 | None:intergenic |
| CCTTCAAGAACAGCACGAAC+CGG | 0.494340 | 3.3:-95539233 | None:intergenic |
| TTCTTCAAGTTCATTTCTCA+AGG | 0.496817 | 3.3:-95538568 | None:intergenic |
| AAGAGAGTTTAGGTTTGTTG+AGG | 0.497209 | 3.3:-95538011 | None:intergenic |
| GATAGTTTGAAGAAGTTGTT+GGG | 0.498781 | 3.3:+95539497 | MS.gene071643:CDS |
| TGTTGAGGGAAGAGGAAGAG+AGG | 0.501159 | 3.3:-95537996 | None:intergenic |
| GATATCAACTCTTCAGAGCT+AGG | 0.501424 | 3.3:-95539407 | None:intergenic |
| GGTGGTGATTCTGTGGATGG+TGG | 0.506017 | 3.3:+95539605 | MS.gene071643:CDS |
| TTCTTAACTTTAAGTTCAGT+AGG | 0.508401 | 3.3:-95539575 | None:intergenic |
| AACAAGTGTTGGCGGTTGAA+TGG | 0.508842 | 3.3:-95538053 | None:intergenic |
| CGGTTCGTGCTGTTCTTGAA+GGG | 0.509292 | 3.3:+95539234 | MS.gene071643:CDS |
| CTAAGTTTCCAGGTAATTGA+CGG | 0.513521 | 3.3:-95538419 | None:intergenic |
| AAACGGTAACCTGCAACAAA+AGG | 0.514148 | 3.3:-95538498 | None:intergenic |
| TCTGTTATGCTTGTTTCACT+GGG | 0.514410 | 3.3:+95539537 | MS.gene071643:CDS |
| TGTGGCGTTGTTGGTATCTA+CGG | 0.518381 | 3.3:+95538240 | MS.gene071643:CDS |
| CAAGTTCATTTCTCAAGGAA+CGG | 0.518679 | 3.3:-95538563 | None:intergenic |
| TTCGTCGTGGTCATCATTAG+CGG | 0.521295 | 3.3:-95538202 | None:intergenic |
| CATGTCCGTTATTCAACTGC+AGG | 0.521534 | 3.3:+95538450 | MS.gene071643:CDS |
| TATGAAAGAGAGGTTTATCC+TGG | 0.522853 | 3.3:+95538855 | MS.gene071643:CDS |
| TTAGCGGCGATGTTTGTGAA+TGG | 0.523421 | 3.3:-95538186 | None:intergenic |
| TTACCTGGAAACTTAGCCAT+TGG | 0.524484 | 3.3:+95538426 | MS.gene071643:CDS |
| ACCAAAGGTCGAAAACCAAA+AGG | 0.526636 | 3.3:-95538759 | None:intergenic |
| CAACGCCGGTAATGGTTTGA+AGG | 0.528133 | 3.3:-95538362 | None:intergenic |
| CTTCAAACCATTACCGGCGT+TGG | 0.528503 | 3.3:+95538363 | MS.gene071643:CDS |
| GGCGGTTGAATGGTTGAAAG+AGG | 0.533941 | 3.3:-95538043 | None:intergenic |
| TGGGTCTTGTTATTATGGTG+TGG | 0.544696 | 3.3:+95539379 | MS.gene071643:CDS |
| AAAGTTAAGAAGAGGATTGG+TGG | 0.549648 | 3.3:+95539587 | MS.gene071643:CDS |
| GTGAGGTTGTTAAAAGAAGC+TGG | 0.552217 | 3.3:+95539314 | MS.gene071643:CDS |
| CTTCTTCTTCCCATAACCAA+AGG | 0.554261 | 3.3:-95538774 | None:intergenic |
| CTGAACTTAAAGTTAAGAAG+AGG | 0.556144 | 3.3:+95539579 | MS.gene071643:CDS |
| CAACACCAACGGAACCAAAA+CGG | 0.557562 | 3.3:-95538515 | None:intergenic |
| GTTGTAAGAATGAGAAGGTG+AGG | 0.561350 | 3.3:-95538118 | None:intergenic |
| ATTGGCCTGCAGTTGAATAA+CGG | 0.563701 | 3.3:-95538455 | None:intergenic |
| AAATCTCTAATCTTCTGTGA+TGG | 0.569057 | 3.3:-95539188 | None:intergenic |
| TAACAAGACCCAATAATTGG+TGG | 0.569913 | 3.3:-95539368 | None:intergenic |
| TGTGAAGTTGAAGCTTTCAC+CGG | 0.573769 | 3.3:+95539214 | MS.gene071643:CDS |
| CGAAGCTACTTATGAAAGAG+AGG | 0.573913 | 3.3:+95538845 | MS.gene071643:CDS |
| TCCACAACCATAATTTCACC+AGG | 0.575009 | 3.3:-95538873 | None:intergenic |
| GAGGATTGGTGGTGATTCTG+TGG | 0.576985 | 3.3:+95539598 | MS.gene071643:CDS |
| CACCGTGGTCAAGAAGGTGC+TGG | 0.578090 | 3.3:+95538312 | MS.gene071643:CDS |
| CGTTGAAAACTTCGGAAACG+AGG | 0.581432 | 3.3:-95538386 | None:intergenic |
| TGTTGATGATTCAATTGTGA+GGG | 0.584102 | 3.3:+95539271 | MS.gene071643:CDS |
| TCTTGAAGGGAAAAGGGTCG+TGG | 0.584140 | 3.3:+95539247 | MS.gene071643:CDS |
| CTTCAACACCGTGGTCAAGA+AGG | 0.588529 | 3.3:+95538306 | MS.gene071643:CDS |
| GTTATGGGAAGAAGAAGTAA+CGG | 0.598346 | 3.3:+95538780 | MS.gene071643:CDS |
| TTGATTAGGTCACACTATGT+TGG | 0.599304 | 3.3:+95539149 | MS.gene071643:CDS |
| TTGTTGATGATTCAATTGTG+AGG | 0.602266 | 3.3:+95539270 | MS.gene071643:CDS |
| TTCGGAAACGAGGCCAACGC+CGG | 0.614737 | 3.3:-95538376 | None:intergenic |
| GAAAAGCCTCGTGAAGAATG+TGG | 0.614821 | 3.3:+95538222 | MS.gene071643:CDS |
| TTGTAGTTGTAAGAATGAGA+AGG | 0.631544 | 3.3:-95538123 | None:intergenic |
| ACCATTATGAGCAACACCAA+CGG | 0.634502 | 3.3:-95538526 | None:intergenic |
| GTTGAAGTGCATGGAGAGCG+AGG | 0.641710 | 3.3:-95538290 | None:intergenic |
| CTACATCATCTAAAATTGTG+AGG | 0.646524 | 3.3:+95539297 | MS.gene071643:CDS |
| TGAATAACGGACATGACCAA+TGG | 0.652687 | 3.3:-95538442 | None:intergenic |
| GGATGGTGGATTGAATGGAT+CGG | 0.653459 | 3.3:+95539619 | MS.gene071643:CDS |
| AACTTCTTCAAACTATCCAT+AGG | 0.662605 | 3.3:-95539491 | None:intergenic |
| GTTGATGATTCAATTGTGAG+GGG | 0.670952 | 3.3:+95539272 | MS.gene071643:CDS |
| AGCGAGGTAGCAGAGACGAG+AGG | 0.672004 | 3.3:-95538274 | None:intergenic |
| TACCAGCACCTTCTTGACCA+CGG | 0.675912 | 3.3:-95538314 | None:intergenic |
| GTGCTAAAGAAGTTCACATG+AGG | 0.680748 | 3.3:+95539336 | MS.gene071643:CDS |
| ACAACGCCACATTCTTCACG+AGG | 0.684608 | 3.3:-95538228 | None:intergenic |
| GACCACGGTGTTGAAGTGCA+TGG | 0.689058 | 3.3:-95538299 | None:intergenic |
| GATATCTAATAGGATGAGTG+TGG | 0.701334 | 3.3:+95539424 | MS.gene071643:CDS |
| CTCCATGCACTTCAACACCG+TGG | 0.731810 | 3.3:+95538297 | MS.gene071643:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATACATTGTTTTTGTTC+TGG | - | chr3.3:95538936-95538955 | None:intergenic | 20.0% |
| ! | TAATAACAAGACCCAATAAT+TGG | - | chr3.3:95539374-95539393 | None:intergenic | 25.0% |
| ! | TATGAATCAAGAAGATTGTT+TGG | + | chr3.3:95539008-95539027 | MS.gene071643:intron | 25.0% |
| !! | AAGATTGTTTGGTGAAATAT+TGG | + | chr3.3:95539019-95539038 | MS.gene071643:intron | 25.0% |
| !! | TTCTTAACTTTAAGTTCAGT+AGG | - | chr3.3:95539578-95539597 | None:intergenic | 25.0% |
| !!! | ATTATTGGGTCTTGTTATTA+TGG | + | chr3.3:95539374-95539393 | MS.gene071643:CDS | 25.0% |
| AAATCTCTAATCTTCTGTGA+TGG | - | chr3.3:95539191-95539210 | None:intergenic | 30.0% | |
| AACTTCTTCAAACTATCCAT+AGG | - | chr3.3:95539494-95539513 | None:intergenic | 30.0% | |
| AGAAATGAACTTGAAGAATC+TGG | + | chr3.3:95538573-95538592 | MS.gene071643:CDS | 30.0% | |
| ATAACTACATCACAATCAAC+AGG | - | chr3.3:95539056-95539075 | None:intergenic | 30.0% | |
| ATCTTCATCTCTTTCTGATT+TGG | - | chr3.3:95539656-95539675 | None:intergenic | 30.0% | |
| ATTATGGTTGTGGATAAAAG+TGG | + | chr3.3:95538882-95538901 | MS.gene071643:intron | 30.0% | |
| CTGAACTTAAAGTTAAGAAG+AGG | + | chr3.3:95539579-95539598 | MS.gene071643:CDS | 30.0% | |
| CTTAAAGTTAAGAAGAGGAT+TGG | + | chr3.3:95539584-95539603 | MS.gene071643:CDS | 30.0% | |
| GAAGAAGAAAAAGAGAGTTT+AGG | - | chr3.3:95538024-95538043 | None:intergenic | 30.0% | |
| GATAGTTTGAAGAAGTTGTT+GGG | + | chr3.3:95539497-95539516 | MS.gene071643:CDS | 30.0% | |
| GCTGAGATTAAGGAATTTAT+TGG | + | chr3.3:95539446-95539465 | MS.gene071643:CDS | 30.0% | |
| TCAACAATTCTCGCTATAAA+AGG | - | chr3.3:95538666-95538685 | None:intergenic | 30.0% | |
| TCTTCATCTCTTTCTGATTT+GGG | - | chr3.3:95539655-95539674 | None:intergenic | 30.0% | |
| TTCCCAAATACAACAGAATT+GGG | - | chr3.3:95538981-95539000 | None:intergenic | 30.0% | |
| TTGTAGTTGTAAGAATGAGA+AGG | - | chr3.3:95538126-95538145 | None:intergenic | 30.0% | |
| TTTCCCAAATACAACAGAAT+TGG | - | chr3.3:95538982-95539001 | None:intergenic | 30.0% | |
| ! | CTACATCATCTAAAATTGTG+AGG | + | chr3.3:95539297-95539316 | MS.gene071643:CDS | 30.0% |
| ! | TCACAGAAGATTAGAGATTT+TGG | + | chr3.3:95539191-95539210 | MS.gene071643:CDS | 30.0% |
| ! | TTCTTCAAGTTCATTTCTCA+AGG | - | chr3.3:95538571-95538590 | None:intergenic | 30.0% |
| !! | CTGAAGAGTTGATATCTAAT+AGG | + | chr3.3:95539414-95539433 | MS.gene071643:CDS | 30.0% |
| !! | TGTTGATGATTCAATTGTGA+GGG | + | chr3.3:95539271-95539290 | MS.gene071643:CDS | 30.0% |
| !! | TTGTTGATGATTCAATTGTG+AGG | + | chr3.3:95539270-95539289 | MS.gene071643:CDS | 30.0% |
| !! | TTTTGTGTCGTTGAAAACTT+CGG | - | chr3.3:95538397-95538416 | None:intergenic | 30.0% |
| AAAGTCCTTCAAACCATTAC+CGG | + | chr3.3:95538357-95538376 | MS.gene071643:CDS | 35.0% | |
| AAAGTTAAGAAGAGGATTGG+TGG | + | chr3.3:95539587-95539606 | MS.gene071643:CDS | 35.0% | |
| ATTGCATGTCCACCAATTAT+TGG | + | chr3.3:95539359-95539378 | MS.gene071643:CDS | 35.0% | |
| CAAGTTCATTTCTCAAGGAA+CGG | - | chr3.3:95538566-95538585 | None:intergenic | 35.0% | |
| CAGAAAGAGATGAAGATTGT+TGG | + | chr3.3:95539659-95539678 | MS.gene071643:CDS | 35.0% | |
| CTAAGTTTCCAGGTAATTGA+CGG | - | chr3.3:95538422-95538441 | None:intergenic | 35.0% | |
| CTAATCAAACCCTGTTGAAA+AGG | - | chr3.3:95539137-95539156 | None:intergenic | 35.0% | |
| GAAGCGTGTGAAAAAGTTAA+AGG | + | chr3.3:95538684-95538703 | MS.gene071643:CDS | 35.0% | |
| GATATCTAATAGGATGAGTG+TGG | + | chr3.3:95539424-95539443 | MS.gene071643:CDS | 35.0% | |
| GGATAGTTTGAAGAAGTTGT+TGG | + | chr3.3:95539496-95539515 | MS.gene071643:CDS | 35.0% | |
| GGTTTATCCTGGTGAAATTA+TGG | + | chr3.3:95538866-95538885 | MS.gene071643:CDS | 35.0% | |
| GTTATGGGAAGAAGAAGTAA+CGG | + | chr3.3:95538780-95538799 | MS.gene071643:CDS | 35.0% | |
| GTTGTGGAAAAAACAAGTGT+TGG | - | chr3.3:95538067-95538086 | None:intergenic | 35.0% | |
| TAACAAGACCCAATAATTGG+TGG | - | chr3.3:95539371-95539390 | None:intergenic | 35.0% | |
| TATGAAAGAGAGGTTTATCC+TGG | + | chr3.3:95538855-95538874 | MS.gene071643:CDS | 35.0% | |
| TCTGTTATGCTTGTTTCACT+GGG | + | chr3.3:95539537-95539556 | MS.gene071643:CDS | 35.0% | |
| TGCCCAATTCTGTTGTATTT+GGG | + | chr3.3:95538976-95538995 | MS.gene071643:intron | 35.0% | |
| TGGTTTGAAGGACTTTGTTA+TGG | - | chr3.3:95538353-95538372 | None:intergenic | 35.0% | |
| TTAAGTTCAGTAGGTTCAAC+AGG | - | chr3.3:95539569-95539588 | None:intergenic | 35.0% | |
| TTCTGTTATGCTTGTTTCAC+TGG | + | chr3.3:95539536-95539555 | MS.gene071643:CDS | 35.0% | |
| TTGATTAGGTCACACTATGT+TGG | + | chr3.3:95539149-95539168 | MS.gene071643:CDS | 35.0% | |
| TTGCATGTCCACCAATTATT+GGG | + | chr3.3:95539360-95539379 | MS.gene071643:CDS | 35.0% | |
| TTGCCCAATTCTGTTGTATT+TGG | + | chr3.3:95538975-95538994 | MS.gene071643:intron | 35.0% | |
| ! | AAGGACTTTGTTATGGTTGA+CGG | - | chr3.3:95538346-95538365 | None:intergenic | 35.0% |
| ! | CTTTTCAACAGGGTTTGATT+AGG | + | chr3.3:95539135-95539154 | MS.gene071643:intron | 35.0% |
| ! | TGAATGGGAATGTGTTGTTA+GGG | - | chr3.3:95538173-95538192 | None:intergenic | 35.0% |
| ! | TGTGTTGTTAGGGTTGTTAT+TGG | - | chr3.3:95538163-95538182 | None:intergenic | 35.0% |
| !! | AAGAGAGTTTAGGTTTGTTG+AGG | - | chr3.3:95538014-95538033 | None:intergenic | 35.0% |
| !! | AGAGAGTTTAGGTTTGTTGA+GGG | - | chr3.3:95538013-95538032 | None:intergenic | 35.0% |
| !! | GTTGATGATTCAATTGTGAG+GGG | + | chr3.3:95539272-95539291 | MS.gene071643:CDS | 35.0% |
| !! | TTCACTTGCTTTTCTACCTA+TGG | + | chr3.3:95539475-95539494 | MS.gene071643:CDS | 35.0% |
| !!! | TTGAGAGAAGAGTTTTGTTG+TGG | - | chr3.3:95538083-95538102 | None:intergenic | 35.0% |
| AAACGGTAACCTGCAACAAA+AGG | - | chr3.3:95538501-95538520 | None:intergenic | 40.0% | |
| ACAAAACTCCGTCAATTACC+TGG | + | chr3.3:95538411-95538430 | MS.gene071643:CDS | 40.0% | |
| ACCAAAGGTCGAAAACCAAA+AGG | - | chr3.3:95538762-95538781 | None:intergenic | 40.0% | |
| ACCATTATGAGCAACACCAA+CGG | - | chr3.3:95538529-95538548 | None:intergenic | 40.0% | |
| CGAAGCTACTTATGAAAGAG+AGG | + | chr3.3:95538845-95538864 | MS.gene071643:CDS | 40.0% | |
| CTTCTTCTTCCCATAACCAA+AGG | - | chr3.3:95538777-95538796 | None:intergenic | 40.0% | |
| GATATCAACTCTTCAGAGCT+AGG | - | chr3.3:95539410-95539429 | None:intergenic | 40.0% | |
| GTGAGGTTGTTAAAAGAAGC+TGG | + | chr3.3:95539314-95539333 | MS.gene071643:CDS | 40.0% | |
| GTGCTAAAGAAGTTCACATG+AGG | + | chr3.3:95539336-95539355 | MS.gene071643:CDS | 40.0% | |
| GTTATAGCTGTTCCTGATTC+TGG | + | chr3.3:95539071-95539090 | MS.gene071643:intron | 40.0% | |
| GTTGTAAGAATGAGAAGGTG+AGG | - | chr3.3:95538121-95538140 | None:intergenic | 40.0% | |
| TCCACAACCATAATTTCACC+AGG | - | chr3.3:95538876-95538895 | None:intergenic | 40.0% | |
| TCCTGGTGAAATTATGGTTG+TGG | + | chr3.3:95538872-95538891 | MS.gene071643:intron | 40.0% | |
| TGCTGTTCTTGAAGGGAAAA+GGG | + | chr3.3:95539241-95539260 | MS.gene071643:CDS | 40.0% | |
| TGTGAAGTTGAAGCTTTCAC+CGG | + | chr3.3:95539214-95539233 | MS.gene071643:CDS | 40.0% | |
| TTACCTGGAAACTTAGCCAT+TGG | + | chr3.3:95538426-95538445 | MS.gene071643:CDS | 40.0% | |
| ! | AACGTTCAACCTTTTGTTGC+AGG | + | chr3.3:95538489-95538508 | MS.gene071643:CDS | 40.0% |
| ! | AATGAGAAGGTGAGGTTTTG+GGG | - | chr3.3:95538113-95538132 | None:intergenic | 40.0% |
| ! | AGAATGAGAAGGTGAGGTTT+TGG | - | chr3.3:95538115-95538134 | None:intergenic | 40.0% |
| ! | ATTGGCCTGCAGTTGAATAA+CGG | - | chr3.3:95538458-95538477 | None:intergenic | 40.0% |
| ! | GAATGAGAAGGTGAGGTTTT+GGG | - | chr3.3:95538114-95538133 | None:intergenic | 40.0% |
| ! | GGTTTTCGACCTTTGGTTAT+GGG | + | chr3.3:95538765-95538784 | MS.gene071643:CDS | 40.0% |
| ! | GTGAATGGGAATGTGTTGTT+AGG | - | chr3.3:95538174-95538193 | None:intergenic | 40.0% |
| ! | TGGTTTTCGACCTTTGGTTA+TGG | + | chr3.3:95538764-95538783 | MS.gene071643:CDS | 40.0% |
| ! | TTTGTTGCAGGTTACCGTTT+TGG | + | chr3.3:95538501-95538520 | MS.gene071643:CDS | 40.0% |
| !! | AGGTTGAACGTTTTTGAGCA+TGG | - | chr3.3:95538481-95538500 | None:intergenic | 40.0% |
| !! | GAACGTTTTTGAGCATGGAT+TGG | - | chr3.3:95538476-95538495 | None:intergenic | 40.0% |
| !! | GTGGAAAAAACAAGTGTTGG+CGG | - | chr3.3:95538064-95538083 | None:intergenic | 40.0% |
| !! | TGAATAACGGACATGACCAA+TGG | - | chr3.3:95538445-95538464 | None:intergenic | 40.0% |
| !! | TGGGTCTTGTTATTATGGTG+TGG | + | chr3.3:95539379-95539398 | MS.gene071643:CDS | 40.0% |
| !! | TTTAGGTTTGTTGAGGGAAG+AGG | - | chr3.3:95538007-95538026 | None:intergenic | 40.0% |
| !!! | CGGTTCTGTTGTTTTTGCTT+CGG | + | chr3.3:95538800-95538819 | MS.gene071643:CDS | 40.0% |
| !!! | TCCTTTTGGTTTTCGACCTT+TGG | + | chr3.3:95538758-95538777 | MS.gene071643:CDS | 40.0% |
| CAACACCAACGGAACCAAAA+CGG | - | chr3.3:95538518-95538537 | None:intergenic | 45.0% | |
| CATGTCCGTTATTCAACTGC+AGG | + | chr3.3:95538450-95538469 | MS.gene071643:CDS | 45.0% | |
| CGTTGAAAACTTCGGAAACG+AGG | - | chr3.3:95538389-95538408 | None:intergenic | 45.0% | |
| CTTGGTTATGCTGCAAAAGC+TGG | + | chr3.3:95539107-95539126 | MS.gene071643:intron | 45.0% | |
| GAAAAGCCTCGTGAAGAATG+TGG | + | chr3.3:95538222-95538241 | MS.gene071643:CDS | 45.0% | |
| GATGAGTGTGGCTGAGATTA+AGG | + | chr3.3:95539436-95539455 | MS.gene071643:CDS | 45.0% | |
| TAGCGGCGATGTTTGTGAAT+GGG | - | chr3.3:95538188-95538207 | None:intergenic | 45.0% | |
| TGACCAATGGCTAAGTTTCC+AGG | - | chr3.3:95538432-95538451 | None:intergenic | 45.0% | |
| TGTGGCGTTGTTGGTATCTA+CGG | + | chr3.3:95538240-95538259 | MS.gene071643:CDS | 45.0% | |
| TTAGCGGCGATGTTTGTGAA+TGG | - | chr3.3:95538189-95538208 | None:intergenic | 45.0% | |
| TTCGTCGTGGTCATCATTAG+CGG | - | chr3.3:95538205-95538224 | None:intergenic | 45.0% | |
| ! | AGCTGGTGTTCCTTTTCAAC+AGG | + | chr3.3:95539124-95539143 | MS.gene071643:intron | 45.0% |
| ! | GCTGGTGTTCCTTTTCAACA+GGG | + | chr3.3:95539125-95539144 | MS.gene071643:intron | 45.0% |
| ! | GTGCTGTTCTTGAAGGGAAA+AGG | + | chr3.3:95539240-95539259 | MS.gene071643:CDS | 45.0% |
| ! | GTTGCTGTCAGAGATCCTTT+TGG | + | chr3.3:95538744-95538763 | MS.gene071643:CDS | 45.0% |
| !! | AACAAGTGTTGGCGGTTGAA+TGG | - | chr3.3:95538056-95538075 | None:intergenic | 45.0% |
| !! | ATTGGTGGTGATTCTGTGGA+TGG | + | chr3.3:95539602-95539621 | MS.gene071643:CDS | 45.0% |
| !! | GGATGGTGGATTGAATGGAT+CGG | + | chr3.3:95539619-95539638 | MS.gene071643:CDS | 45.0% |
| !! | TCCGTTGGTGTTGCTCATAA+TGG | + | chr3.3:95538525-95538544 | MS.gene071643:CDS | 45.0% |
| !! | TCTGTGGATGGTGGATTGAA+TGG | + | chr3.3:95539614-95539633 | MS.gene071643:CDS | 45.0% |
| ACAACGCCACATTCTTCACG+AGG | - | chr3.3:95538231-95538250 | None:intergenic | 50.0% | |
| CCTTCAAGAACAGCACGAAC+CGG | - | chr3.3:95539236-95539255 | None:intergenic | 50.0% | |
| CGTGAAGAATGTGGCGTTGT+TGG | + | chr3.3:95538231-95538250 | MS.gene071643:CDS | 50.0% | |
| CTTCAAACCATTACCGGCGT+TGG | + | chr3.3:95538363-95538382 | MS.gene071643:CDS | 50.0% | |
| CTTCAACACCGTGGTCAAGA+AGG | + | chr3.3:95538306-95538325 | MS.gene071643:CDS | 50.0% | |
| GCAGCAACAACACCAGAATC+AGG | - | chr3.3:95539086-95539105 | None:intergenic | 50.0% | |
| GGCGGTTGAATGGTTGAAAG+AGG | - | chr3.3:95538046-95538065 | None:intergenic | 50.0% | |
| GTTGAGGGAAGAGGAAGAGA+GGG | - | chr3.3:95537998-95538017 | None:intergenic | 50.0% | |
| TACCAGCACCTTCTTGACCA+CGG | - | chr3.3:95538317-95538336 | None:intergenic | 50.0% | |
| TCTTGAAGGGAAAAGGGTCG+TGG | + | chr3.3:95539247-95539266 | MS.gene071643:CDS | 50.0% | |
| TGTTGAGGGAAGAGGAAGAG+AGG | - | chr3.3:95537999-95538018 | None:intergenic | 50.0% | |
| ! | CAACGCCGGTAATGGTTTGA+AGG | - | chr3.3:95538365-95538384 | None:intergenic | 50.0% |
| ! | CGGTTCGTGCTGTTCTTGAA+GGG | + | chr3.3:95539234-95539253 | MS.gene071643:CDS | 50.0% |
| !! | GAGGATTGGTGGTGATTCTG+TGG | + | chr3.3:95539598-95539617 | MS.gene071643:CDS | 50.0% |
| !! | TCTGGTGTTGTTGCTGCACT+TGG | + | chr3.3:95539089-95539108 | MS.gene071643:intron | 50.0% |
| !!! | GGTTACCGTTTTGGTTCCGT+TGG | + | chr3.3:95538510-95538529 | MS.gene071643:CDS | 50.0% |
| CTCCATGCACTTCAACACCG+TGG | + | chr3.3:95538297-95538316 | MS.gene071643:CDS | 55.0% | |
| GGTGGTGATTCTGTGGATGG+TGG | + | chr3.3:95539605-95539624 | MS.gene071643:CDS | 55.0% | |
| GTTGAAGTGCATGGAGAGCG+AGG | - | chr3.3:95538293-95538312 | None:intergenic | 55.0% | |
| TAGCAGAGACGAGAGGCTTC+TGG | - | chr3.3:95538270-95538289 | None:intergenic | 55.0% | |
| ! | CCGGTTCGTGCTGTTCTTGA+AGG | + | chr3.3:95539233-95539252 | MS.gene071643:CDS | 55.0% |
| ! | CTTCACGAGGCTTTTCGTCG+TGG | - | chr3.3:95538218-95538237 | None:intergenic | 55.0% |
| ! | GACCACGGTGTTGAAGTGCA+TGG | - | chr3.3:95538302-95538321 | None:intergenic | 55.0% |
| AACGAGGCCAACGCCGGTAA+TGG | - | chr3.3:95538373-95538392 | None:intergenic | 60.0% | |
| AGCGAGGTAGCAGAGACGAG+AGG | - | chr3.3:95538277-95538296 | None:intergenic | 60.0% | |
| TTCGGAAACGAGGCCAACGC+CGG | - | chr3.3:95538379-95538398 | None:intergenic | 60.0% | |
| ! | CACCGTGGTCAAGAAGGTGC+TGG | + | chr3.3:95538312-95538331 | MS.gene071643:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 95537973 | 95539688 | 95537973 | ID=MS.gene071643 |
| chr3.3 | mRNA | 95537973 | 95539688 | 95537973 | ID=MS.gene071643.t1;Parent=MS.gene071643 |
| chr3.3 | exon | 95537973 | 95538887 | 95537973 | ID=MS.gene071643.t1.exon1;Parent=MS.gene071643.t1 |
| chr3.3 | CDS | 95537973 | 95538887 | 95537973 | ID=cds.MS.gene071643.t1;Parent=MS.gene071643.t1 |
| chr3.3 | exon | 95539146 | 95539688 | 95539146 | ID=MS.gene071643.t1.exon2;Parent=MS.gene071643.t1 |
| chr3.3 | CDS | 95539146 | 95539688 | 95539146 | ID=cds.MS.gene071643.t1;Parent=MS.gene071643.t1 |
| Gene Sequence |
| Protein sequence |
