AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51603


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51603.t1 MTR_7g077830 96.693 514 17 0 5 518 21 534 0.0 1011
MS.gene51603.t1 MTR_8g030600 74.517 569 90 6 5 518 20 588 0.0 833
MS.gene51603.t1 MTR_3g463080 78.241 432 94 0 87 518 85 516 0.0 718
MS.gene51603.t1 MTR_8g030600 70.842 487 87 6 5 436 20 506 0.0 675
MS.gene51603.t1 MTR_2g027710 96.591 176 6 0 306 481 59 234 5.82e-119 350
MS.gene51603.t1 MTR_7g066780 40.047 427 248 3 94 517 85 506 8.87e-112 341
MS.gene51603.t1 MTR_4g116030 40.117 511 279 10 24 514 21 524 2.35e-111 341
MS.gene51603.t1 MTR_5g069630 39.552 402 236 2 122 516 111 512 2.11e-94 296
MS.gene51603.t1 MTR_4g030900 37.613 444 247 6 103 518 2 443 3.06e-88 278
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51603.t1 AT4G00370 83.940 467 72 1 52 518 78 541 0.0 800
MS.gene51603.t1 AT2G29650 75.737 441 106 1 79 518 72 512 0.0 703
MS.gene51603.t1 AT2G29650 78.173 394 86 0 125 518 7 400 0.0 646
MS.gene51603.t1 AT2G29650 78.462 390 84 0 129 518 1 390 0.0 640
MS.gene51603.t1 AT2G29650 73.394 327 86 1 79 404 72 398 1.75e-176 502
MS.gene51603.t1 AT2G38060 39.030 474 280 5 53 517 39 512 6.81e-114 347
MS.gene51603.t1 AT5G20380 41.706 422 236 7 100 514 90 508 3.09e-104 322
MS.gene51603.t1 AT5G20380 41.706 422 236 7 100 514 142 560 1.04e-103 322
MS.gene51603.t1 AT3G46980 41.439 403 228 3 122 516 125 527 8.57e-102 316
MS.gene51603.t1 AT3G46980 41.439 403 228 3 122 516 125 527 8.79e-102 316
MS.gene51603.t1 AT3G46980 41.439 403 228 3 122 516 173 575 2.21e-101 317
MS.gene51603.t1 AT2G38060 38.902 419 248 4 53 463 39 457 5.73e-98 307
MS.gene51603.t1 AT5G44370 35.499 431 261 5 103 518 4 432 8.08e-85 269
MS.gene51603.t1 AT3G46980 39.481 347 202 3 178 516 1 347 3.20e-79 252
MS.gene51603.t1 AT3G46980 39.481 347 202 3 178 516 1 347 3.20e-79 252
MS.gene51603.t1 AT3G46980 39.481 347 202 3 178 516 1 347 3.61e-79 252
MS.gene51603.t1 AT3G46980 39.481 347 202 3 178 516 1 347 3.61e-79 252
MS.gene51603.t1 AT3G46980 37.589 282 168 3 243 516 2 283 1.93e-56 190

Find 127 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTATTATGCGTGCCTTTA+TGG 0.088357 7.2:-28163022 MS.gene51603:CDS
CTTAGATTCTTGGTGGTATA+TGG 0.187897 7.2:-28163149 MS.gene51603:intron
TTCTTGGAATGACGTGTTTA+AGG 0.216470 7.2:-28161016 MS.gene51603:CDS
GGTGTGCTTGCTGGCGTCTT+TGG 0.227575 7.2:-28161163 MS.gene51603:CDS
GAAGCATCTGGTTTGCCTTT+TGG 0.244662 7.2:-28162415 MS.gene51603:CDS
AAGTTCAACCTCACTGAATC+TGG 0.253604 7.2:-28161939 MS.gene51603:CDS
CTTATTATGCGTGCCTTTAT+GGG 0.279316 7.2:-28163021 MS.gene51603:CDS
CAATGTCACAAGAGTTTAAC+TGG 0.281775 7.2:-28163339 MS.gene51603:CDS
ACACCTATTGCTGCAAGAAT+TGG 0.294493 7.2:-28163057 MS.gene51603:CDS
CTGATGGCCACCCAAGGTTT+TGG 0.299035 7.2:+28162462 None:intergenic
CCGAGATCCGGGTCATCTTT+TGG 0.301202 7.2:+28162230 None:intergenic
ATGGCCGTGTTTGCAAATAT+TGG 0.302731 7.2:-28161888 MS.gene51603:CDS
TTCTATCAAAAGCACCAGTT+TGG 0.314560 7.2:-28162133 MS.gene51603:CDS
CATCTGTTTCGGACATTCCT+TGG 0.328614 7.2:-28162163 MS.gene51603:CDS
TCTCTCATTTCTGCCACAAT+TGG 0.328674 7.2:-28162100 MS.gene51603:CDS
GTCCAAGTGGATTCCAGTTT+CGG 0.337421 7.2:-28162567 MS.gene51603:CDS
TCAATTTCAGGGCGTATTGC+TGG 0.355168 7.2:-28161203 MS.gene51603:intron
ATGCAATCAATCGGGTTTCT+AGG 0.357772 7.2:-28161649 MS.gene51603:CDS
TCTGTTGCATTATACATAAT+AGG 0.358132 7.2:-28160991 MS.gene51603:CDS
GATCTGCTTCTCTCCGAAAC+TGG 0.362948 7.2:+28162554 None:intergenic
CAAAAGGGTTACTCGCAATC+TGG 0.368248 7.2:+28163982 None:intergenic
CTCTCATTTCTGCCACAATT+GGG 0.368700 7.2:-28162099 MS.gene51603:CDS
TTGGATCCCTTGGAAGCATC+TGG 0.370421 7.2:-28162427 MS.gene51603:CDS
CTTGGACAGTATATTATTCA+TGG 0.377433 7.2:+28162583 None:intergenic
GGGAAGGTCGTGCTAGGATT+TGG 0.384068 7.2:-28163111 MS.gene51603:CDS
GGCTCTTATGTGTTCTTCCA+TGG 0.389923 7.2:-28161917 MS.gene51603:CDS
AATACAGCAGGTGTGCTTGC+TGG 0.392626 7.2:-28161172 MS.gene51603:CDS
AACCTCACCGATTCCCATAA+AGG 0.393601 7.2:+28163008 None:intergenic
TCTATCAAAAGCACCAGTTT+GGG 0.404421 7.2:-28162132 MS.gene51603:CDS
TACCTTTCGAACAGTTGTTA+AGG 0.406324 7.2:+28161827 None:intergenic
CAAAAGATGACCCGGATCTC+GGG 0.407606 7.2:-28162229 MS.gene51603:CDS
GCAATTCTATTGGAAGGAAA+TGG 0.413376 7.2:-28163801 MS.gene51603:CDS
GATGCCTACTTACTATAATC+AGG 0.418993 7.2:-28162054 MS.gene51603:intron
AACAGGCGAAGCAATTCTAT+TGG 0.419363 7.2:-28163811 MS.gene51603:CDS
GTCTTTGGCACAGCTGCAAC+TGG 0.422764 7.2:-28161148 MS.gene51603:CDS
TTAGATTCTTGGTGGTATAT+GGG 0.425597 7.2:-28163148 MS.gene51603:intron
CACCTATTGCTGCAAGAATT+GGG 0.432187 7.2:-28163056 MS.gene51603:CDS
CCTTGGTTCTGTGGTAGGCT+TGG 0.435784 7.2:-28162504 MS.gene51603:CDS
ATGTACCTTGGTTCTGTGGT+AGG 0.451338 7.2:-28162509 MS.gene51603:CDS
TGGCAGATCATGCAATCAAT+CGG 0.452349 7.2:-28161658 MS.gene51603:intron
CAATTTCAGGGCGTATTGCT+GGG 0.455105 7.2:-28161202 MS.gene51603:intron
TGCTAGGATTTGGAGTTGTA+TGG 0.455824 7.2:-28163101 MS.gene51603:CDS
CCAAAAGATGACCCGGATCT+CGG 0.456410 7.2:-28162230 MS.gene51603:CDS
ATGCGTGCCTTTATGGGAAT+CGG 0.457296 7.2:-28163015 MS.gene51603:CDS
ATTGAACAAAGAGAAGTATA+CGG 0.459678 7.2:-28163942 MS.gene51603:CDS
ATTGTGCATGGCATGCAGTC+AGG 0.462532 7.2:-28161572 MS.gene51603:intron
TCGGATGCCTTCTCACAGTC+TGG 0.475944 7.2:-28161410 MS.gene51603:CDS
CTCCGAAACTGGAATCCACT+TGG 0.479863 7.2:+28162565 None:intergenic
AGCCCAATTCTTGCAGCAAT+AGG 0.485315 7.2:+28163054 None:intergenic
GGCAGCAACTTCCTAAGCGC+TGG 0.486573 7.2:-28163758 MS.gene51603:CDS
TATTCCAATCATCAAGACAT+TGG 0.488754 7.2:-28161383 MS.gene51603:CDS
CGTATCGAAAACATCTGTTT+CGG 0.489579 7.2:-28162174 MS.gene51603:CDS
ACATAATAGGCACACTGGTA+TGG 0.496734 7.2:-28160978 MS.gene51603:CDS
GTGGCATCTGATGAAGGAAC+AGG 0.503282 7.2:-28163828 MS.gene51603:CDS
CTGGGGCTATCTACTTACTC+AGG 0.504684 7.2:-28163278 MS.gene51603:intron
TGGTCCAATGTCTTGATGAT+TGG 0.505896 7.2:+28161379 None:intergenic
TTTCCTCTACCCCGAGATCC+GGG 0.506435 7.2:+28162219 None:intergenic
CCCTCCAATATTTGCAAACA+CGG 0.508594 7.2:+28161884 None:intergenic
AGGCAAACCAGATGCTTCCA+AGG 0.509648 7.2:+28162420 None:intergenic
TTTGATAGAATTAATTTCCA+AGG 0.514333 7.2:+28162146 None:intergenic
CAGTTAAACTCTTGTGACAT+TGG 0.514473 7.2:+28163340 None:intergenic
GACAGTATATTATTCATGGC+GGG 0.516181 7.2:+28162587 None:intergenic
ATGGTTCGCTGGTATCTCCT+TGG 0.520372 7.2:-28163782 MS.gene51603:CDS
TTCTTATCCAAAACCTTGGG+TGG 0.525807 7.2:-28162469 MS.gene51603:CDS
GAGATTATAAGAGCCCAAAC+TGG 0.527723 7.2:+28162119 None:intergenic
TGACCCGGATCTCGGGGTAG+AGG 0.528268 7.2:-28162222 MS.gene51603:CDS
TTCCTTAACAACTGTTCGAA+AGG 0.528379 7.2:-28161829 MS.gene51603:intron
TATATTATTCATGGCGGGCA+TGG 0.532851 7.2:+28162592 None:intergenic
GGTATATGGGCAGACAAACT+TGG 0.535648 7.2:-28163135 MS.gene51603:CDS
GATCCTGTGGCATCTGATGA+AGG 0.540723 7.2:-28163834 MS.gene51603:CDS
ATTACGATAAGCCAGCGCTT+AGG 0.542049 7.2:+28163747 None:intergenic
GGCAGATCATGCAATCAATC+GGG 0.542373 7.2:-28161657 MS.gene51603:intron
ACCTTTGCTAACTAACGTGT+CGG 0.543679 7.2:+28161854 None:intergenic
TGGAGTTGTATGGTGGTCAA+TGG 0.544883 7.2:-28163091 MS.gene51603:CDS
GAATAAATGTTCCCCAATTG+TGG 0.546749 7.2:+28162087 None:intergenic
GTATATAGCGGCATGTACCT+TGG 0.546888 7.2:-28162521 MS.gene51603:CDS
GTTCGCTGGTATCTCCTTGG+TGG 0.550695 7.2:-28163779 MS.gene51603:CDS
CAAAGAGAAGTATACGGACT+AGG 0.551941 7.2:-28163936 MS.gene51603:CDS
CTTGGTGGGAAGGTCGTGCT+AGG 0.552485 7.2:-28163117 MS.gene51603:CDS
CGGCATGTACCTTGGTTCTG+TGG 0.552939 7.2:-28162513 MS.gene51603:CDS
TCTCATTTCTGCCACAATTG+GGG 0.559881 7.2:-28162098 MS.gene51603:CDS
AAATGTATATCAGTTAAGAA+AGG 0.560962 7.2:-28164051 MS.gene51603:CDS
ATGCACAATACTGCCATGGC+GGG 0.561244 7.2:+28161586 None:intergenic
GGCGAAGCAATTCTATTGGA+AGG 0.565577 7.2:-28163807 MS.gene51603:CDS
TAATTTCAGACTGTCATGCA+TGG 0.565924 7.2:+28165181 None:intergenic
GAACATTTATTCTATTAACA+TGG 0.567906 7.2:-28162076 MS.gene51603:CDS
CGCCATGGCAGTATTGTGCA+TGG 0.568359 7.2:-28161584 MS.gene51603:CDS
AGTTCAACCTCACTGAATCT+GGG 0.568787 7.2:-28161938 MS.gene51603:CDS
ATTGGAAGGAAATGGTTCGC+TGG 0.569594 7.2:-28163793 MS.gene51603:CDS
CCATGTCAAAACACCCGCCA+TGG 0.580413 7.2:-28161599 MS.gene51603:CDS
GGCAGACAAACTTGGTGGGA+AGG 0.582949 7.2:-28163127 MS.gene51603:CDS
GCCGTGTTTGCAAATATTGG+AGG 0.583856 7.2:-28161885 MS.gene51603:CDS
CTGGGACTATCGAATACAGC+AGG 0.588965 7.2:-28161184 MS.gene51603:CDS
ATAACCTGATTATAGTAAGT+AGG 0.589115 7.2:+28162050 None:intergenic
CCAAATGAGTAAAACACTGA+TGG 0.590761 7.2:+28162446 None:intergenic
GGCAAACCAGATGCTTCCAA+GGG 0.591797 7.2:+28162421 None:intergenic
GTTCCTTCATCAGATGCCAC+AGG 0.595225 7.2:+28163831 None:intergenic
AATATTTGCAAACACGGCCA+TGG 0.597293 7.2:+28161890 None:intergenic
AACTGGAACAGTGCAACAGT+TGG 0.597654 7.2:-28163322 MS.gene51603:CDS
TGTTCTTCCATGGTTAACCA+TGG 0.609195 7.2:-28161907 MS.gene51603:CDS
TGCCATGCACAATACTGCCA+TGG 0.612350 7.2:+28161582 None:intergenic
GCCGACACGTTAGTTAGCAA+AGG 0.615485 7.2:-28161855 MS.gene51603:CDS
TATGGGCAGACAAACTTGGT+GGG 0.623534 7.2:-28163131 MS.gene51603:CDS
ATATGGGCAGACAAACTTGG+TGG 0.628033 7.2:-28163132 MS.gene51603:CDS
TGAATAATATACTGTCCAAG+TGG 0.631779 7.2:-28162580 MS.gene51603:CDS
TAGGATTTGGAGTTGTATGG+TGG 0.635420 7.2:-28163098 MS.gene51603:CDS
TAGCTCACCAAAAGATGACC+CGG 0.637431 7.2:-28162237 MS.gene51603:CDS
AACACGGCCATGGTTAACCA+TGG 0.638076 7.2:+28161900 None:intergenic
ATTATACATAATAGGCACAC+TGG 0.640114 7.2:-28160983 MS.gene51603:CDS
AAAAGATGACCCGGATCTCG+GGG 0.643756 7.2:-28162228 MS.gene51603:CDS
ATAAAGACCAGACTGTGAGA+AGG 0.653878 7.2:+28161403 None:intergenic
CCGTGTTTGCAAATATTGGA+GGG 0.658652 7.2:-28161884 MS.gene51603:CDS
TGTTTGCAAATATTGGAGGG+TGG 0.661112 7.2:-28161881 MS.gene51603:CDS
GCACGCATAATAAGCAAACA+AGG 0.665091 7.2:+28163030 None:intergenic
AAAACACTGATGGCCACCCA+AGG 0.665588 7.2:+28162456 None:intergenic
ACTGGATACATACTTCAAAG+AGG 0.666637 7.2:-28161130 MS.gene51603:intron
AAGGATCTATCACTTCAAAG+AGG 0.667820 7.2:-28164032 MS.gene51603:CDS
GGACAGTATATTATTCATGG+CGG 0.671998 7.2:+28162586 None:intergenic
ATATGACATTGATGAAACGA+AGG 0.676264 7.2:-28163859 MS.gene51603:CDS
TGCCTTTATGGGAATCGGTG+AGG 0.677573 7.2:-28163010 MS.gene51603:intron
TCACTTTCGCTAGTATATAG+CGG 0.679969 7.2:-28162533 MS.gene51603:CDS
TTAGGAAGTTGCTGCCACCA+AGG 0.680539 7.2:+28163765 None:intergenic
TGAAACGAAGGTAGATCCTG+TGG 0.681518 7.2:-28163847 MS.gene51603:CDS
CATGCACAATACTGCCATGG+CGG 0.706051 7.2:+28161585 None:intergenic
CCAAGCCTACCACAGAACCA+AGG 0.711808 7.2:+28162504 None:intergenic
AAATTACTCACAGCATAACG+TGG 0.722801 7.2:+28161359 None:intergenic
ATAAGAGCCCAGATTCAGTG+AGG 0.769613 7.2:+28161931 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAATAAAAAAATT+TGG - chr7.2:28161187-28161206 MS.gene51603:CDS 0.0%
!! AAAAAATAAAATGAATTTAG+TGG + chr7.2:28161134-28161153 None:intergenic 10.0%
!!! TTTTAAATAAAAAAATTTGG+TGG - chr7.2:28161190-28161209 MS.gene51603:CDS 10.0%
!! AAAAAATTATGGTTTGAATT+AGG + chr7.2:28164676-28164695 None:intergenic 15.0%
!! AAAAATAAAAAAATAACACG+TGG - chr7.2:28161647-28161666 MS.gene51603:CDS 15.0%
!! AAAAATTAATACAAAAAGAC+AGG + chr7.2:28161286-28161305 None:intergenic 15.0%
!! CTTAATATATATGGATAATA+TGG - chr7.2:28164443-28164462 MS.gene51603:intron 15.0%
!!! ATTTTGTAGTTTTTTTCTTA+GGG + chr7.2:28161577-28161596 None:intergenic 15.0%
!!! TGATATTTTGATAAAAACTA+TGG - chr7.2:28161456-28161475 MS.gene51603:intron 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr7.2:28161760-28161779 MS.gene51603:intron 15.0%
!! AAATGTATATCAGTTAAGAA+AGG - chr7.2:28162070-28162089 MS.gene51603:CDS 20.0%
!! AAATGTATTATACAAAGCAT+AGG + chr7.2:28164100-28164119 None:intergenic 20.0%
!! ACTATTCATGATATGTTAAA+TGG - chr7.2:28163802-28163821 MS.gene51603:CDS 20.0%
!! ATAACATTGTTATGTTATGA+TGG - chr7.2:28162939-28162958 MS.gene51603:intron 20.0%
!! ATATATTCTAACATGTGATA+AGG - chr7.2:28160979-28160998 MS.gene51603:CDS 20.0%
!! ATATGAAATCAATTCTTGTT+AGG + chr7.2:28162904-28162923 None:intergenic 20.0%
!! CATTACTCTAATTAAAGTAA+AGG + chr7.2:28161836-28161855 None:intergenic 20.0%
!! CTTTGCAATTTATATATCAT+TGG - chr7.2:28165052-28165071 MS.gene51603:intron 20.0%
!! GAACATTTATTCTATTAACA+TGG - chr7.2:28164045-28164064 MS.gene51603:CDS 20.0%
!! TAATAAAAATGAGAACTGAA+AGG + chr7.2:28161014-28161033 None:intergenic 20.0%
!! TAATACAATTCATAAAATGC+TGG + chr7.2:28161219-28161238 None:intergenic 20.0%
!! TACAATCATATTTACAAATG+AGG + chr7.2:28162028-28162047 None:intergenic 20.0%
!! TATTCTGCTCTTAATATATA+TGG - chr7.2:28164434-28164453 MS.gene51603:intron 20.0%
!! TTTGATAGAATTAATTTCCA+AGG + chr7.2:28163978-28163997 None:intergenic 20.0%
!!! AATTCTAACTATTTGTTTTC+AGG - chr7.2:28163500-28163519 MS.gene51603:intron 20.0%
!!! AGAATTATTTTGTGTTAAGA+GGG + chr7.2:28163486-28163505 None:intergenic 20.0%
!!! ATTCTAACTATTTGTTTTCA+GGG - chr7.2:28163501-28163520 MS.gene51603:intron 20.0%
!!! GATTTTGTAGTTTTTTTCTT+AGG + chr7.2:28161578-28161597 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr7.2:28161759-28161778 MS.gene51603:intron 20.0%
!!! TAGAATTATTTTGTGTTAAG+AGG + chr7.2:28163487-28163506 None:intergenic 20.0%
!!! TATGGAATATATTTTCTACT+GGG - chr7.2:28165161-28165180 MS.gene51603:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr7.2:28161761-28161780 MS.gene51603:intron 20.0%
!!! TTTTATTTTTTTTTGGCCTT+GGG + chr7.2:28161637-28161656 None:intergenic 20.0%
!!! TTTTGTAGTTTTTTTCTTAG+GGG + chr7.2:28161576-28161595 None:intergenic 20.0%
!!! TTTTTATTTTTTTTTGGCCT+TGG + chr7.2:28161638-28161657 None:intergenic 20.0%
!!! TTTTTTTCTTCTTAGATTCT+TGG - chr7.2:28162962-28162981 MS.gene51603:intron 20.0%
!!! TTTTTTTTTTTTACAGGGAT+CGG - chr7.2:28164692-28164711 MS.gene51603:intron 20.0%
! AAATTATGGTTTGAATTAGG+TGG + chr7.2:28164673-28164692 None:intergenic 25.0%
! ACATATCATGAATAGTGATA+TGG + chr7.2:28163798-28163817 None:intergenic 25.0%
! ACCTGTATATTACAATATGA+AGG + chr7.2:28162739-28162758 None:intergenic 25.0%
! AGAAAAAAGATGACTGAATT+AGG + chr7.2:28162825-28162844 None:intergenic 25.0%
! AGGACTTGTATAAATTAGTT+TGG - chr7.2:28161890-28161909 MS.gene51603:CDS 25.0%
! AGTAGATTTCATCGAAATTA+AGG + chr7.2:28163755-28163774 None:intergenic 25.0%
! ATAACCTGATTATAGTAAGT+AGG + chr7.2:28164074-28164093 None:intergenic 25.0%
! ATTTAGTGGAAAATTGAAAG+TGG + chr7.2:28161120-28161139 None:intergenic 25.0%
! ATTTGAGGAATTCAAACTAA+AGG + chr7.2:28164596-28164615 None:intergenic 25.0%
! ATTTGTAATAGTTGTTGATC+TGG + chr7.2:28164352-28164371 None:intergenic 25.0%
! CTTTCTTTGTAGTTTACTTT+AGG - chr7.2:28161502-28161521 MS.gene51603:intron 25.0%
! GTAGATTTCATCGAAATTAA+GGG + chr7.2:28163754-28163773 None:intergenic 25.0%
! TAACATAACAATGTTATGCT+AGG + chr7.2:28162936-28162955 None:intergenic 25.0%
! TAACATATAAATACAGCTTG+TGG + chr7.2:28163390-28163409 None:intergenic 25.0%
! TCATGATATGTTAAATGGAA+GGG - chr7.2:28163807-28163826 MS.gene51603:CDS 25.0%
! TCCTTCATATTGTAATATAC+AGG - chr7.2:28162735-28162754 MS.gene51603:intron 25.0%
! TCTGTTGCATTATACATAAT+AGG - chr7.2:28165130-28165149 MS.gene51603:intron 25.0%
! TTCATAGCAAAACTGATAAT+TGG + chr7.2:28163220-28163239 None:intergenic 25.0%
! TTCATGATATGTTAAATGGA+AGG - chr7.2:28163806-28163825 MS.gene51603:CDS 25.0%
! TTGTAGTAACTCTTTGATAT+TGG - chr7.2:28162043-28162062 MS.gene51603:intron 25.0%
!! AAGATAGTTTCTCTTTTGAA+TGG - chr7.2:28163308-28163327 MS.gene51603:CDS 25.0%
!! AGTTTGAATTCCTCAAATTT+TGG - chr7.2:28164598-28164617 MS.gene51603:intron 25.0%
!! ATGGAATATATTTTCTACTG+GGG - chr7.2:28165162-28165181 MS.gene51603:intron 25.0%
!! ATTGAACAAAGAGAAGTATA+CGG - chr7.2:28162179-28162198 MS.gene51603:CDS 25.0%
!! CAAAGCATGGATATTATTTT+AGG - chr7.2:28161870-28161889 MS.gene51603:CDS 25.0%
!! GTATGGAATATATTTTCTAC+TGG - chr7.2:28165160-28165179 MS.gene51603:intron 25.0%
!! TATATGTGATTTTTCATTGC+AGG - chr7.2:28165082-28165101 MS.gene51603:intron 25.0%
!!! AAATTAGCTTGTTGATTCAA+TGG + chr7.2:28164143-28164162 None:intergenic 25.0%
!!! AATTCAGTCATCTTTTTTCT+GGG - chr7.2:28162825-28162844 MS.gene51603:intron 25.0%
!!! AGCTAATTTGTCATTTTATC+AGG - chr7.2:28164154-28164173 MS.gene51603:intron 25.0%
!!! GGATCACTATATTTTAAACT+AGG - chr7.2:28161952-28161971 MS.gene51603:intron 25.0%
!!! TAATTCAGTCATCTTTTTTC+TGG - chr7.2:28162824-28162843 MS.gene51603:intron 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr7.2:28161762-28161781 MS.gene51603:intron 25.0%
!!! TTTATTTTTTTTTGGCCTTG+GGG + chr7.2:28161636-28161655 None:intergenic 25.0%
AAGAGAAACTATCTTCGATT+TGG + chr7.2:28163303-28163322 None:intergenic 30.0%
AAGATATATGACAGTGTGTT+TGG + chr7.2:28162624-28162643 None:intergenic 30.0%
ATATGACATTGATGAAACGA+AGG - chr7.2:28162262-28162281 MS.gene51603:intron 30.0%
ATTAAACCACTTATAGCCAT+TGG + chr7.2:28161048-28161067 None:intergenic 30.0%
ATTATACATAATAGGCACAC+TGG - chr7.2:28165138-28165157 MS.gene51603:intron 30.0%
CATATGCAAACATGTTGTAT+TGG + chr7.2:28164634-28164653 None:intergenic 30.0%
CATGATATGTTAAATGGAAG+GGG - chr7.2:28163808-28163827 MS.gene51603:CDS 30.0%
CCACATAAACCAAAATTAGA+GGG + chr7.2:28161934-28161953 None:intergenic 30.0%
CTATGTGTACAATGTATGTT+TGG - chr7.2:28162473-28162492 MS.gene51603:CDS 30.0%
CTTGGACAGTATATTATTCA+TGG + chr7.2:28163541-28163560 None:intergenic 30.0%
GACAATATTTCAGTAACAAG+TGG + chr7.2:28164326-28164345 None:intergenic 30.0%
TATTATCAACATAGCACCAA+TGG - chr7.2:28161029-28161048 MS.gene51603:intron 30.0%
TATTCCAATCATCAAGACAT+TGG - chr7.2:28164738-28164757 MS.gene51603:intron 30.0%
TCCACATAAACCAAAATTAG+AGG + chr7.2:28161935-28161954 None:intergenic 30.0%
TCTTACCATGAAAAGTTTGT+GGG + chr7.2:28161367-28161386 None:intergenic 30.0%
TGAATAATATACTGTCCAAG+TGG - chr7.2:28163541-28163560 MS.gene51603:intron 30.0%
TGCTACAAATGCAAAACTTA+GGG + chr7.2:28161604-28161623 None:intergenic 30.0%
TGTACAATGTATGTTTGGAT+TGG - chr7.2:28162478-28162497 MS.gene51603:CDS 30.0%
TTAGTAAGCTATACTCTACA+CGG + chr7.2:28163349-28163368 None:intergenic 30.0%
TTTGCATAACACGAAAAAGA+TGG + chr7.2:28163196-28163215 None:intergenic 30.0%
! ACTAGGCTTAAATGTAGTTT+TGG - chr7.2:28161969-28161988 MS.gene51603:intron 30.0%
! AGCTTTTCTTTTATGCAACA+TGG - chr7.2:28162409-28162428 MS.gene51603:CDS 30.0%
! ATTTTCCCACAAACTTTTCA+TGG - chr7.2:28161359-28161378 MS.gene51603:intron 30.0%
! CTATGAAATTTTACTGGTCA+TGG + chr7.2:28164800-28164819 None:intergenic 30.0%
! CTTTTCTTATCCAAAACCTT+GGG - chr7.2:28163649-28163668 MS.gene51603:intron 30.0%
! TACATTCGAAATTTGAGACA+TGG + chr7.2:28162655-28162674 None:intergenic 30.0%
! TTAGATTCTTGGTGGTATAT+GGG - chr7.2:28162973-28162992 MS.gene51603:intron 30.0%
! TTTTCTTCTTAGATTCTTGG+TGG - chr7.2:28162965-28162984 MS.gene51603:intron 30.0%
! TTTTGCATTTGTAGCAGTTT+TGG - chr7.2:28161608-28161627 MS.gene51603:CDS 30.0%
!! ACTTACTTTTCTCAACCAAA+AGG + chr7.2:28163724-28163743 None:intergenic 30.0%
!! CATAAAAGTGCCAAAATTTG+AGG + chr7.2:28164611-28164630 None:intergenic 30.0%
!!! ATTCAGTCATCTTTTTTCTG+GGG - chr7.2:28162826-28162845 MS.gene51603:intron 30.0%
!!! GACTTCTACTTTTTGCAAAA+GGG + chr7.2:28162157-28162176 None:intergenic 30.0%
!!! TGACTTCTACTTTTTGCAAA+AGG + chr7.2:28162158-28162177 None:intergenic 30.0%
!!! TTATTTTTTTTTGGCCTTGG+GGG + chr7.2:28161635-28161654 None:intergenic 30.0%
AAATGAATGTGGAGAACTCT+CGG + chr7.2:28165018-28165037 None:intergenic 35.0%
AAATTACTCACAGCATAACG+TGG + chr7.2:28164765-28164784 None:intergenic 35.0%
AAGGATCTATCACTTCAAAG+AGG - chr7.2:28162089-28162108 MS.gene51603:CDS 35.0%
ACCAAGATAAGATACTCACA+CGG + chr7.2:28162436-28162455 None:intergenic 35.0%
ACTGGATACATACTTCAAAG+AGG - chr7.2:28164991-28165010 MS.gene51603:intron 35.0%
AGAATCACAGTGCAAAATCA+CGG + chr7.2:28162583-28162602 None:intergenic 35.0%
AGAGTTCTCCACATTCATTT+CGG - chr7.2:28165018-28165037 MS.gene51603:intron 35.0%
AGTAAACTCATTTCCTTTCC+AGG - chr7.2:28163857-28163876 MS.gene51603:CDS 35.0%
AGTAACTCTTTGATATTGGC+AGG - chr7.2:28162047-28162066 MS.gene51603:intron 35.0%
ATAGTGCGTGAAATTCTATC+TGG - chr7.2:28164816-28164835 MS.gene51603:intron 35.0%
ATATTGCCACCATCCATAAA+AGG + chr7.2:28161416-28161435 None:intergenic 35.0%
ATCGCAACTTCGTTAAAGTT+AGG + chr7.2:28161548-28161567 None:intergenic 35.0%
CAAAATTAGAGGGTTTCAAG+AGG + chr7.2:28161924-28161943 None:intergenic 35.0%
CAATGTCACAAGAGTTTAAC+TGG - chr7.2:28162782-28162801 MS.gene51603:intron 35.0%
CAGTTAAACTCTTGTGACAT+TGG + chr7.2:28162784-28162803 None:intergenic 35.0%
CCAAATGAGTAAAACACTGA+TGG + chr7.2:28163678-28163697 None:intergenic 35.0%
CCGAACAATTTCCTTCTATA+CGG + chr7.2:28164393-28164412 None:intergenic 35.0%
CCGTATAGAAGGAAATTGTT+CGG - chr7.2:28164390-28164409 MS.gene51603:intron 35.0%
CGTATCGAAAACATCTGTTT+CGG - chr7.2:28163947-28163966 MS.gene51603:CDS 35.0%
CTACAAATGCAAAACTTAGG+GGG + chr7.2:28161602-28161621 None:intergenic 35.0%
CTCTTACCATGAAAAGTTTG+TGG + chr7.2:28161368-28161387 None:intergenic 35.0%
CTGCTACAAATGCAAAACTT+AGG + chr7.2:28161605-28161624 None:intergenic 35.0%
CTTATTATGCGTGCCTTTAT+GGG - chr7.2:28163100-28163119 MS.gene51603:CDS 35.0%
GAAAAAAAGCTCATCCTTGA+AGG - chr7.2:28163921-28163940 MS.gene51603:CDS 35.0%
GAATAAATGTTCCCCAATTG+TGG + chr7.2:28164037-28164056 None:intergenic 35.0%
GACAGTATATTATTCATGGC+GGG + chr7.2:28163537-28163556 None:intergenic 35.0%
GATGCCTACTTACTATAATC+AGG - chr7.2:28164067-28164086 MS.gene51603:intron 35.0%
GCAATTCTATTGGAAGGAAA+TGG - chr7.2:28162320-28162339 MS.gene51603:intron 35.0%
GCTACAAATGCAAAACTTAG+GGG + chr7.2:28161603-28161622 None:intergenic 35.0%
GGACAGTATATTATTCATGG+CGG + chr7.2:28163538-28163557 None:intergenic 35.0%
GTTTCCAGTAACTAGTCATA+TGG - chr7.2:28163161-28163180 MS.gene51603:intron 35.0%
TACCTTTCGAACAGTTGTTA+AGG + chr7.2:28164297-28164316 None:intergenic 35.0%
TACTTGCCAAGAAAGAACAA+AGG + chr7.2:28163841-28163860 None:intergenic 35.0%
TATTGCCACCATCCATAAAA+GGG + chr7.2:28161415-28161434 None:intergenic 35.0%
TCACTTTCGCTAGTATATAG+CGG - chr7.2:28163588-28163607 MS.gene51603:intron 35.0%
TCGCAACTTCGTTAAAGTTA+GGG + chr7.2:28161547-28161566 None:intergenic 35.0%
TGGAAAATTGAAAGTGGTTG+AGG + chr7.2:28161114-28161133 None:intergenic 35.0%
TGTAAACTCCGAAATGAATG+TGG + chr7.2:28165029-28165048 None:intergenic 35.0%
TTAACAGAATGCCGTATAGA+AGG - chr7.2:28164379-28164398 MS.gene51603:intron 35.0%
TTCACTTCTTTCATTGCTTC+AGG - chr7.2:28161081-28161100 MS.gene51603:intron 35.0%
TTCCTTAACAACTGTTCGAA+AGG - chr7.2:28164292-28164311 MS.gene51603:intron 35.0%
TTCTTGGAATGACGTGTTTA+AGG - chr7.2:28165105-28165124 MS.gene51603:intron 35.0%
! CACAAACTTTTCATGGTAAG+AGG - chr7.2:28161366-28161385 MS.gene51603:intron 35.0%
! CACGCACTATGAAATTTTAC+TGG + chr7.2:28164806-28164825 None:intergenic 35.0%
! CCATCAGTGTTTTACTCATT+TGG - chr7.2:28163675-28163694 MS.gene51603:intron 35.0%
! CCTTTTCTTATCCAAAACCT+TGG - chr7.2:28163648-28163667 MS.gene51603:intron 35.0%
! CTAACCATATGACTAGTTAC+TGG + chr7.2:28163168-28163187 None:intergenic 35.0%
! CTCTTGAAACCCTCTAATTT+TGG - chr7.2:28161922-28161941 MS.gene51603:CDS 35.0%
! CTGAGTGATGACTTGTATAA+TGG + chr7.2:28164850-28164869 None:intergenic 35.0%
! CTTAGATTCTTGGTGGTATA+TGG - chr7.2:28162972-28162991 MS.gene51603:intron 35.0%
! CTTTAACGAAGTTGCGATTT+TGG - chr7.2:28161550-28161569 MS.gene51603:intron 35.0%
! GATTTTTCATTGCAGGTTCT+TGG - chr7.2:28165089-28165108 MS.gene51603:intron 35.0%
! TTTTACTCATTTGGATCCCT+TGG - chr7.2:28163684-28163703 MS.gene51603:intron 35.0%
!! ATGTATGTTTGGATTGGTGA+CGG - chr7.2:28162484-28162503 MS.gene51603:CDS 35.0%
!! TCTATCAAAAGCACCAGTTT+GGG - chr7.2:28163989-28164008 MS.gene51603:CDS 35.0%
!! TTCTATCAAAAGCACCAGTT+TGG - chr7.2:28163988-28164007 MS.gene51603:CDS 35.0%
!!! CCAAGGTTTTGGATAAGAAA+AGG + chr7.2:28163651-28163670 None:intergenic 35.0%
!!! CCCTCTAATTTTGGTTTATG+TGG - chr7.2:28161931-28161950 MS.gene51603:CDS 35.0%
!!! TATTTTTTTTTGGCCTTGGG+GGG + chr7.2:28161634-28161653 None:intergenic 35.0%
AAAAAGCTCATCCTTGAAGG+CGG - chr7.2:28163924-28163943 MS.gene51603:CDS 40.0%
AACAGGCGAAGCAATTCTAT+TGG - chr7.2:28162310-28162329 MS.gene51603:intron 40.0%
AAGTTCAACCTCACTGAATC+TGG - chr7.2:28164182-28164201 MS.gene51603:intron 40.0%
AATATTTGCAAACACGGCCA+TGG + chr7.2:28164234-28164253 None:intergenic 40.0%
AATCGCGAATCGGTGAAAAT+AGG + chr7.2:28161998-28162017 None:intergenic 40.0%
ACACCTATTGCTGCAAGAAT+TGG - chr7.2:28163064-28163083 MS.gene51603:CDS 40.0%
ACATAATAGGCACACTGGTA+TGG - chr7.2:28165143-28165162 MS.gene51603:intron 40.0%
ACCGTGTGAGTATCTTATCT+TGG - chr7.2:28162432-28162451 MS.gene51603:CDS 40.0%
ACCTTTGCTAACTAACGTGT+CGG + chr7.2:28164270-28164289 None:intergenic 40.0%
ACTCCTCCTTTGTTCTTTCT+TGG - chr7.2:28163832-28163851 MS.gene51603:CDS 40.0%
AGGCAACTAAAATCGCGAAT+CGG + chr7.2:28162008-28162027 None:intergenic 40.0%
AGTTCAACCTCACTGAATCT+GGG - chr7.2:28164183-28164202 MS.gene51603:intron 40.0%
AGTTGCGTAAGAAAAAAGGC+AGG + chr7.2:28164499-28164518 None:intergenic 40.0%
ATAAAGACCAGACTGTGAGA+AGG + chr7.2:28164721-28164740 None:intergenic 40.0%
ATAGCACCAATGGCTATAAG+TGG - chr7.2:28161039-28161058 MS.gene51603:intron 40.0%
ATCGCGAATCGGTGAAAATA+GGG + chr7.2:28161997-28162016 None:intergenic 40.0%
ATGCAATCAATCGGGTTTCT+AGG - chr7.2:28164472-28164491 MS.gene51603:intron 40.0%
ATGGCCGTGTTTGCAAATAT+TGG - chr7.2:28164233-28164252 MS.gene51603:intron 40.0%
CACCTATTGCTGCAAGAATT+GGG - chr7.2:28163065-28163084 MS.gene51603:CDS 40.0%
CATAAAAGGGTCATCAGCAT+TGG + chr7.2:28161402-28161421 None:intergenic 40.0%
CCCTCCAATATTTGCAAACA+CGG + chr7.2:28164240-28164259 None:intergenic 40.0%
CCGTGTTTGCAAATATTGGA+GGG - chr7.2:28164237-28164256 MS.gene51603:intron 40.0%
CGCAACTTCGTTAAAGTTAG+GGG + chr7.2:28161546-28161565 None:intergenic 40.0%
CTCTCATTTCTGCCACAATT+GGG - chr7.2:28164022-28164041 MS.gene51603:CDS 40.0%
GAAAGAAGTGAAGCTTCTGT+TGG + chr7.2:28161073-28161092 None:intergenic 40.0%
GAATTAGGTGGCTGCATATA+TGG + chr7.2:28164661-28164680 None:intergenic 40.0%
GAGATTATAAGAGCCCAAAC+TGG + chr7.2:28164005-28164024 None:intergenic 40.0%
GCAACTTCGTTAAAGTTAGG+GGG + chr7.2:28161545-28161564 None:intergenic 40.0%
GCACGCATAATAAGCAAACA+AGG + chr7.2:28163094-28163113 None:intergenic 40.0%
GCTCACGAGTTTCAATTTCA+GGG - chr7.2:28164907-28164926 MS.gene51603:intron 40.0%
GCTCAGTTGCGTAAGAAAAA+AGG + chr7.2:28164503-28164522 None:intergenic 40.0%
GCTTATTATGCGTGCCTTTA+TGG - chr7.2:28163099-28163118 MS.gene51603:CDS 40.0%
GGTGGCAATATTTGTCTATG+TGG - chr7.2:28161425-28161444 MS.gene51603:intron 40.0%
TCTCATTTCTGCCACAATTG+GGG - chr7.2:28164023-28164042 MS.gene51603:CDS 40.0%
TCTCTCATTTCTGCCACAAT+TGG - chr7.2:28164021-28164040 MS.gene51603:CDS 40.0%
TGCCACAAGTGCAAAACTTA+GGG - chr7.2:28161732-28161751 MS.gene51603:intron 40.0%
TGCTCACGAGTTTCAATTTC+AGG - chr7.2:28164906-28164925 MS.gene51603:intron 40.0%
TGGCAGATCATGCAATCAAT+CGG - chr7.2:28164463-28164482 MS.gene51603:intron 40.0%
TGTTCTTCCATGGTTAACCA+TGG - chr7.2:28164214-28164233 MS.gene51603:intron 40.0%
TGTTTGCAAATATTGGAGGG+TGG - chr7.2:28164240-28164259 MS.gene51603:intron 40.0%
TTCTTATCCAAAACCTTGGG+TGG - chr7.2:28163652-28163671 MS.gene51603:intron 40.0%
TTGCCAAGAAAGAACAAAGG+AGG + chr7.2:28163838-28163857 None:intergenic 40.0%
! ATCGCAACTTTGGGAAAGTT+AGG - chr7.2:28161790-28161809 MS.gene51603:intron 40.0%
! CAAAGAGAAGTATACGGACT+AGG - chr7.2:28162185-28162204 MS.gene51603:CDS 40.0%
! CAATGCTGATGACCCTTTTA+TGG - chr7.2:28161400-28161419 MS.gene51603:CDS 40.0%
! CTTTCCCAAAGTTGCGATTT+TGG + chr7.2:28161788-28161807 None:intergenic 40.0%
! TAGGATTTGGAGTTGTATGG+TGG - chr7.2:28163023-28163042 MS.gene51603:CDS 40.0%
! TCGCAACTTTGGGAAAGTTA+GGG - chr7.2:28161791-28161810 MS.gene51603:intron 40.0%
! TGACAGTGTGTTTGGATTAG+CGG + chr7.2:28162616-28162635 None:intergenic 40.0%
! TGCTAGGATTTGGAGTTGTA+TGG - chr7.2:28163020-28163039 MS.gene51603:CDS 40.0%
! TGGTCCAATGTCTTGATGAT+TGG + chr7.2:28164745-28164764 None:intergenic 40.0%
! TTTTGCACTTGTGGCAGTTT+TGG + chr7.2:28161728-28161747 None:intergenic 40.0%
!! TATATTATTCATGGCGGGCA+TGG + chr7.2:28163532-28163551 None:intergenic 40.0%
!!! AGCGTTTTTAGTGTTCAGTC+TGG - chr7.2:28162113-28162132 MS.gene51603:CDS 40.0%
!!! GTTTTTAGTGTTCAGTCTGG+TGG - chr7.2:28162116-28162135 MS.gene51603:CDS 40.0%
AACTGGAACAGTGCAACAGT+TGG - chr7.2:28162799-28162818 MS.gene51603:intron 45.0%
AATCACACAGCACATGCATC+AGG + chr7.2:28162527-28162546 None:intergenic 45.0%
AGCCCAATTCTTGCAGCAAT+AGG + chr7.2:28163070-28163089 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG - chr7.2:28161693-28161712 MS.gene51603:intron 45.0%
ATAAGAGCCCAGATTCAGTG+AGG + chr7.2:28164193-28164212 None:intergenic 45.0%
ATATGGGCAGACAAACTTGG+TGG - chr7.2:28162989-28163008 MS.gene51603:intron 45.0%
ATGCGTGCCTTTATGGGAAT+CGG - chr7.2:28163106-28163125 MS.gene51603:CDS 45.0%
ATTACGATAAGCCAGCGCTT+AGG + chr7.2:28162377-28162396 None:intergenic 45.0%
ATTGGAAGGAAATGGTTCGC+TGG - chr7.2:28162328-28162347 MS.gene51603:intron 45.0%
CAAAAGGGTTACTCGCAATC+TGG + chr7.2:28162142-28162161 None:intergenic 45.0%
CATCTGTTTCGGACATTCCT+TGG - chr7.2:28163958-28163977 MS.gene51603:CDS 45.0%
CCACAAGTGCAAAACTTAGG+GGG - chr7.2:28161734-28161753 MS.gene51603:intron 45.0%
CTGCCACAAGTGCAAAACTT+AGG - chr7.2:28161731-28161750 MS.gene51603:intron 45.0%
GCCACAAGTGCAAAACTTAG+GGG - chr7.2:28161733-28161752 MS.gene51603:intron 45.0%
GCCGTGTTTGCAAATATTGG+AGG - chr7.2:28164236-28164255 MS.gene51603:intron 45.0%
GGCAGATCATGCAATCAATC+GGG - chr7.2:28164464-28164483 MS.gene51603:intron 45.0%
GGCGAAGCAATTCTATTGGA+AGG - chr7.2:28162314-28162333 MS.gene51603:intron 45.0%
GGCTCTTATGTGTTCTTCCA+TGG - chr7.2:28164204-28164223 MS.gene51603:intron 45.0%
GGTATATGGGCAGACAAACT+TGG - chr7.2:28162986-28163005 MS.gene51603:intron 45.0%
GTATATAGCGGCATGTACCT+TGG - chr7.2:28163600-28163619 MS.gene51603:intron 45.0%
TAGCTCACCAAAAGATGACC+CGG - chr7.2:28163884-28163903 MS.gene51603:CDS 45.0%
TATGGGCAGACAAACTTGGT+GGG - chr7.2:28162990-28163009 MS.gene51603:intron 45.0%
TCAATTTCAGGGCGTATTGC+TGG - chr7.2:28164918-28164937 MS.gene51603:intron 45.0%
TCGCGAATCGGTGAAAATAG+GGG + chr7.2:28161996-28162015 None:intergenic 45.0%
TGAAACGAAGGTAGATCCTG+TGG - chr7.2:28162274-28162293 MS.gene51603:intron 45.0%
TGAGAACTGAAAGGTGAGAG+TGG + chr7.2:28161005-28161024 None:intergenic 45.0%
TGCTGATGTTCAGCAAAGCA+TGG - chr7.2:28161857-28161876 MS.gene51603:CDS 45.0%
TGGAGTTGTATGGTGGTCAA+TGG - chr7.2:28163030-28163049 MS.gene51603:CDS 45.0%
TTTATGGGAATCGGTGAGGT+TGG - chr7.2:28163115-28163134 MS.gene51603:CDS 45.0%
! CGCAACTTTGGGAAAGTTAG+GGG - chr7.2:28161792-28161811 MS.gene51603:intron 45.0%
! CTTTTGGTGAGCTATATGCC+TGG + chr7.2:28163878-28163897 None:intergenic 45.0%
! GATGACCCTTTTATGGATGG+TGG - chr7.2:28161407-28161426 MS.gene51603:CDS 45.0%
! GCAACTTTGGGAAAGTTAGG+GGG - chr7.2:28161793-28161812 MS.gene51603:intron 45.0%
! GCTGATGACCCTTTTATGGA+TGG - chr7.2:28161404-28161423 MS.gene51603:CDS 45.0%
! GTCCAAGTGGATTCCAGTTT+CGG - chr7.2:28163554-28163573 MS.gene51603:intron 45.0%
!! AACCTCACCGATTCCCATAA+AGG + chr7.2:28163116-28163135 None:intergenic 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG - chr7.2:28161700-28161719 MS.gene51603:intron 45.0%
!! ATGTACCTTGGTTCTGTGGT+AGG - chr7.2:28163612-28163631 MS.gene51603:intron 45.0%
!! GAAGCATCTGGTTTGCCTTT+TGG - chr7.2:28163706-28163725 MS.gene51603:intron 45.0%
!! TGTAAAAAAAAAAAAAATTA+TGG + chr7.2:28164687-28164706 None:intergenic 5.0%
!!! ATAATTTTTTTTTTTTTTAC+AGG - chr7.2:28164686-28164705 MS.gene51603:intron 5.0%
!!! GTTATTTTTTTATTTTTTTT+TGG + chr7.2:28161644-28161663 None:intergenic 5.0%
!!! TAATTTTTTTTTTTTTTACA+GGG - chr7.2:28164687-28164706 MS.gene51603:intron 5.0%
AAAACACTGATGGCCACCCA+AGG + chr7.2:28163668-28163687 None:intergenic 50.0%
AAAAGATGACCCGGATCTCG+GGG - chr7.2:28163893-28163912 MS.gene51603:CDS 50.0%
AACACGGCCATGGTTAACCA+TGG + chr7.2:28164224-28164243 None:intergenic 50.0%
AACACGTGGCACCTCACTTA+GGG - chr7.2:28161661-28161680 MS.gene51603:intron 50.0%
AATACAGCAGGTGTGCTTGC+TGG - chr7.2:28164949-28164968 MS.gene51603:intron 50.0%
AGGCAAACCAGATGCTTCCA+AGG + chr7.2:28163704-28163723 None:intergenic 50.0%
ATGCACAATACTGCCATGGC+GGG + chr7.2:28164538-28164557 None:intergenic 50.0%
ATGGTTCGCTGGTATCTCCT+TGG - chr7.2:28162339-28162358 MS.gene51603:intron 50.0%
ATTGTGCATGGCATGCAGTC+AGG - chr7.2:28164549-28164568 MS.gene51603:intron 50.0%
CAAAAGATGACCCGGATCTC+GGG - chr7.2:28163892-28163911 MS.gene51603:CDS 50.0%
CAAGTGCAAAACTTAGGGGG+CGG - chr7.2:28161737-28161756 MS.gene51603:intron 50.0%
CATGCACAATACTGCCATGG+CGG + chr7.2:28164539-28164558 None:intergenic 50.0%
CCAAAAGATGACCCGGATCT+CGG - chr7.2:28163891-28163910 MS.gene51603:CDS 50.0%
CTCCGAAACTGGAATCCACT+TGG + chr7.2:28163559-28163578 None:intergenic 50.0%
CTGGGGCTATCTACTTACTC+AGG - chr7.2:28162843-28162862 MS.gene51603:intron 50.0%
GATCCTGTGGCATCTGATGA+AGG - chr7.2:28162287-28162306 MS.gene51603:intron 50.0%
GATCTGCTTCTCTCCGAAAC+TGG + chr7.2:28163570-28163589 None:intergenic 50.0%
GCCGACACGTTAGTTAGCAA+AGG - chr7.2:28164266-28164285 MS.gene51603:intron 50.0%
GGCAAACCAGATGCTTCCAA+GGG + chr7.2:28163703-28163722 None:intergenic 50.0%
GGGGCCAAAATCGCAACTTT+GGG - chr7.2:28161781-28161800 MS.gene51603:intron 50.0%
GGTGAGCTATATGCCTGGAA+AGG + chr7.2:28163873-28163892 None:intergenic 50.0%
GTGGCATCTGATGAAGGAAC+AGG - chr7.2:28162293-28162312 MS.gene51603:intron 50.0%
GTTCCTTCATCAGATGCCAC+AGG + chr7.2:28162293-28162312 None:intergenic 50.0%
TAACACGTGGCACCTCACTT+AGG - chr7.2:28161660-28161679 MS.gene51603:intron 50.0%
TGCCATGCACAATACTGCCA+TGG + chr7.2:28164542-28164561 None:intergenic 50.0%
TGCCTTTATGGGAATCGGTG+AGG - chr7.2:28163111-28163130 MS.gene51603:CDS 50.0%
TTAGGAAGTTGCTGCCACCA+AGG + chr7.2:28162359-28162378 None:intergenic 50.0%
! CCCCCTAAGTTTTGCACTTG+TGG + chr7.2:28161737-28161756 None:intergenic 50.0%
! GACCGAGTCAAAATTGGCCT+TGG - chr7.2:28161699-28161718 MS.gene51603:intron 50.0%
! TTTTCCTCTACCCCGAGATC+CGG + chr7.2:28163906-28163925 None:intergenic 50.0%
! TTTTCGATACGCCGCCTTCA+AGG + chr7.2:28163938-28163957 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG - chr7.2:28161701-28161720 MS.gene51603:intron 50.0%
!! CGAGTCAAAATTGGCCTTGG+GGG - chr7.2:28161702-28161721 MS.gene51603:intron 50.0%
!! TTGGATCCCTTGGAAGCATC+TGG - chr7.2:28163694-28163713 MS.gene51603:intron 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG + chr7.2:28161704-28161723 None:intergenic 50.0%
CCAAGCCTACCACAGAACCA+AGG + chr7.2:28163620-28163639 None:intergenic 55.0%
CCATGTCAAAACACCCGCCA+TGG - chr7.2:28164522-28164541 MS.gene51603:intron 55.0%
CGCCATGGCAGTATTGTGCA+TGG - chr7.2:28164537-28164556 MS.gene51603:intron 55.0%
GGGAAGGTCGTGCTAGGATT+TGG - chr7.2:28163010-28163029 MS.gene51603:intron 55.0%
GGGGGCCAAAATCGCAACTT+TGG - chr7.2:28161780-28161799 MS.gene51603:intron 55.0%
GTCTTTGGCACAGCTGCAAC+TGG - chr7.2:28164973-28164992 MS.gene51603:intron 55.0%
GTTCGCTGGTATCTCCTTGG+TGG - chr7.2:28162342-28162361 MS.gene51603:intron 55.0%
TCGGATGCCTTCTCACAGTC+TGG - chr7.2:28164711-28164730 MS.gene51603:intron 55.0%
TTTCCTCTACCCCGAGATCC+GGG + chr7.2:28163905-28163924 None:intergenic 55.0%
! CCGAGATCCGGGTCATCTTT+TGG + chr7.2:28163894-28163913 None:intergenic 55.0%
! CTGATGGCCACCCAAGGTTT+TGG + chr7.2:28163662-28163681 None:intergenic 55.0%
! GGCAGACAAACTTGGTGGGA+AGG - chr7.2:28162994-28163013 MS.gene51603:intron 55.0%
!! CCTTGGTTCTGTGGTAGGCT+TGG - chr7.2:28163617-28163636 MS.gene51603:intron 55.0%
!! CGGCATGTACCTTGGTTCTG+TGG - chr7.2:28163608-28163627 MS.gene51603:intron 55.0%
!!! CCATGGCGGGTGTTTTGACA+TGG + chr7.2:28164525-28164544 None:intergenic 55.0%
CTGACGTGGCACCCTAAGTG+AGG + chr7.2:28161675-28161694 None:intergenic 60.0%
CTTGGTGGGAAGGTCGTGCT+AGG - chr7.2:28163004-28163023 MS.gene51603:intron 60.0%
GGCAGCAACTTCCTAAGCGC+TGG - chr7.2:28162363-28162382 MS.gene51603:intron 60.0%
! GGTGTGCTTGCTGGCGTCTT+TGG - chr7.2:28164958-28164977 MS.gene51603:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG - chr7.2:28161618-28161637 MS.gene51603:CDS 60.0%
!! TGACTCGGTCTACGCTGACG+TGG + chr7.2:28161689-28161708 None:intergenic 60.0%
!! TGTGGCAGTTTTGGCCCCCA+AGG + chr7.2:28161719-28161738 None:intergenic 60.0%
TGACCCGGATCTCGGGGTAG+AGG - chr7.2:28163899-28163918 MS.gene51603:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 28160942 28165201 28160942 ID=MS.gene51603
chr7.2 mRNA 28160942 28165201 28160942 ID=MS.gene51603.t1;Parent=MS.gene51603
chr7.2 exon 28165192 28165201 28165192 ID=MS.gene51603.t1.exon1;Parent=MS.gene51603.t1
chr7.2 CDS 28165192 28165201 28165192 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28163707 28164074 28163707 ID=MS.gene51603.t1.exon2;Parent=MS.gene51603.t1
chr7.2 CDS 28163707 28164074 28163707 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28163279 28163386 28163279 ID=MS.gene51603.t1.exon3;Parent=MS.gene51603.t1
chr7.2 CDS 28163279 28163386 28163279 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28163011 28163166 28163011 ID=MS.gene51603.t1.exon4;Parent=MS.gene51603.t1
chr7.2 CDS 28163011 28163166 28163011 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28162406 28162621 28162406 ID=MS.gene51603.t1.exon5;Parent=MS.gene51603.t1
chr7.2 CDS 28162406 28162621 28162406 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28162055 28162264 28162055 ID=MS.gene51603.t1.exon6;Parent=MS.gene51603.t1
chr7.2 CDS 28162055 28162264 28162055 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28161830 28161967 28161830 ID=MS.gene51603.t1.exon7;Parent=MS.gene51603.t1
chr7.2 CDS 28161830 28161967 28161830 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28161573 28161674 28161573 ID=MS.gene51603.t1.exon8;Parent=MS.gene51603.t1
chr7.2 CDS 28161573 28161674 28161573 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28161370 28161435 28161370 ID=MS.gene51603.t1.exon9;Parent=MS.gene51603.t1
chr7.2 CDS 28161370 28161435 28161370 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28161131 28161215 28161131 ID=MS.gene51603.t1.exon10;Parent=MS.gene51603.t1
chr7.2 CDS 28161131 28161215 28161131 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
chr7.2 exon 28160942 28161039 28160942 ID=MS.gene51603.t1.exon11;Parent=MS.gene51603.t1
chr7.2 CDS 28160942 28161039 28160942 ID=cds.MS.gene51603.t1;Parent=MS.gene51603.t1
Gene Sequence

>MS.gene51603

ATGCATGACAGTCTGAAATTAAATTATGTTTCTTAATATATATTCTAACATGTGATAAGGCCACTCTCACCTTTCAGTTCTCATTTTTATTATCAACATAGCACCAATGGCTATAAGTGGTTTAATTTCCAACAGAAGCTTCACTTCTTTCATTGCTTCAGGTTCATTTCCTCAACCACTTTCAATTTTCCACTAAATTCATTTTATTTTTTCATTCATTCATTCATTCATTATTATTGTTGTTCAATTTTTAAATAAAAAAATTTGGTGGCTGCCAGCATTTTATGAATTGTATTATCTACTTTTTGTTTGTAATTTGAGTTCATTTTTATGTTTTTATTCCTGTCTTTTTGTATTAATTTTTTATGCTTATGAAATTTATTTAGTGCACAATTGAGCTGTAGATAGTAAAAACAAATTTTCCCACAAACTTTTCATGGTAAGAGGAGCAACTTCTCCAATGCTGATGACCCTTTTATGGATGGTGGCAATATTTGTCTATGTGGATATGAATTGATATTTTGATAAAAACTATGGTTAGAGAGAAGATTGTAGTTTCACTTTCTTTGTAGTTTACTTTAGGCTTAATAGCAGTTTTTGCCCCCTAACTTTAACGAAGTTGCGATTTTGGCCCCTAAGAAAAAAACTACAAAATCGCCCCCTAAGTTTTGCATTTGTAGCAGTTTTGGCCCCCCAAGGCCAAAAAAAAATAAAAAAATAACACGTGGCACCTCACTTAGGGTGCCACGTCAGCGTAGACCGAGTCAAAATTGGCCTTGGGGGCCAAAACTGCCACAAGTGCAAAACTTAGGGGGCGGTTTTGTAGTTTTTTTTCTTAGGGGGCCAAAATCGCAACTTTGGGAAAGTTAGGGGGCTAAAACTGCTATTAAGCCTTTACTTTAATTAGAGTAATGCTGCTGATGTTCAGCAAAGCATGGATATTATTTTAGGACTTGTATAAATTAGTTTGGATTTTGCACCTCTTGAAACCCTCTAATTTTGGTTTATGTGGATCACTATATTTTAAACTAGGCTTAAATGTAGTTTTGGTCCCCTATTTTCACCGATTCGCGATTTTAGTTGCCTCATTTGTAAATATGATTGTAGTAACTCTTTGATATTGGCAGGAAATGTATATCAGTTAAGAAAGGATCTATCACTTCAAAGAGGAAGCGTTTTTAGTGTTCAGTCTGGTGGCCAGATTGCGAGTAACCCTTTTGCAAAAAGTAGAAGTCATATTGAACAAAGAGAAGTATACGGACTAGGAGTAAGAAAGCTCAGTAAGATAAATAAAGTCTGTGTTCATTACAGTTCAGAAGAATATGACATTGATGAAACGAAGGTAGATCCTGTGGCATCTGATGAAGGAACAGGCGAAGCAATTCTATTGGAAGGAAATGGTTCGCTGGTATCTCCTTGGTGGCAGCAACTTCCTAAGCGCTGGCTTATCGTAATGCTGTGTTTTACAGCTTTTCTTTTATGCAACATGGACCGTGTGAGTATCTTATCTTGGTATTCACAATCTAAATTACTATGTGTACAATGTATGTTTGGATTGGTGACGGATCTTTCATTATCGCTTCCTGATGCATGTGCTGTGTGATTTTGTTGAAGCTTCAATGTGTAGCTTTCACACTACCGTGATTTTGCACTGTGATTCTGTCAAATTTACCGCTAATCCAAACACACTGTCATATATCTTAATGTCTGCCATGTCTCAAATTTCGAATGTAGTTGTGTTTTACAATTTTCATATTGTTGATTATCGAGTATATATCTTAATTCACAAATTTTCCTTCATATTGTAATATACAGGTAAATATGAGCATTGCGATACTTCCAATGTCACAAGAGTTTAACTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGGTGTGATTGCTATGAGCACTTCATAGATCACATTAGCCTAACAAGAATTGATTTCATATATGCAGTAACCTAGCATAACATTGTTATGTTATGATGGTTTTTTTCTTCTTAGATTCTTGGTGGTATATGGGCAGACAAACTTGGTGGGAAGGTCGTGCTAGGATTTGGAGTTGTATGGTGGTCAATGGCAACAATTCTAACACCTATTGCTGCAAGAATTGGGCTACCTTGTTTGCTTATTATGCGTGCCTTTATGGGAATCGGTGAGGTTGGTACATTCTATAGCAATATTACATGTTTCCAGTAACTAGTCATATGGTTAGTTTATCCATCTTTTTCGTGTTATGCAAAACCAATTATCAGTTTTGCTATGAACTTATGAGTATATAAGATTAAGTTGTTTCTCTAAACAAATTAAGTTGTATTCAAATACAGCCAAATCGAAGATAGTTTCTCTTTTGAATGGTCTCATGTTCAAAGTCCGTGTAGAGTATAGCTTACTAAAATAAGTTTATGAGCAAACCACAAGCTGTATTTATATGTTATTTTTTTCAATGACAAATGTTTGTAAGCAAGTGCTTATATCATGAAATATGTACTATTAAGCTCTTTCAAACGCCCTCTTAACACAAAATAATTCTAACTATTTGTTTTCAGGGTGTAGCCATGCCCGCCATGAATAATATACTGTCCAAGTGGATTCCAGTTTCGGAGAGAAGCAGATCACTTTCGCTAGTATATAGCGGCATGTACCTTGGTTCTGTGGTAGGCTTGGCATTCTCACCTTTTCTTATCCAAAACCTTGGGTGGCCATCAGTGTTTTACTCATTTGGATCCCTTGGAAGCATCTGGTTTGCCTTTTGGTTGAGAAAAGTAAGTCAGCTATCCCTTAATTTCGATGAAATCTACTTCGTGTATCTTGTAGCAACACCATATCACTATTCATGATATGTTAAATGGAAGGGGCACTCCTCCTTTGTTCTTTCTTGGCAAGTAAACTCATTTCCTTTCCAGGCATATAGCTCACCAAAAGATGACCCGGATCTCGGGGTAGAGGAAAAAAAGCTCATCCTTGAAGGCGGCGTATCGAAAACATCTGTTTCGGACATTCCTTGGAAATTAATTCTATCAAAAGCACCAGTTTGGGCTCTTATAATCTCTCATTTCTGCCACAATTGGGGAACATTTATTCTATTAACATGGATGCCTACTTACTATAATCAGGTTATTAACCTATGCTTTGTATAATACATTTTTTACATCACTTTCTACAGTCCATTGAATCAACAAGCTAATTTGTCATTTTATCAGGTTCTGAAGTTCAACCTCACTGAATCTGGGCTCTTATGTGTTCTTCCATGGTTAACCATGGCCGTGTTTGCAAATATTGGAGGGTGGATAGCCGACACGTTAGTTAGCAAAGGTGTTTCCTTAACAACTGTTCGAAAGGTATGATAACCACTTGTTACTGAAATATTGTCATGCCAGATCAACAACTATTACAAATAGTGTTCTTAACAGAATGCCGTATAGAAGGAAATTGTTCGGATTCATTTCACACTTTAAAATTATTCTGCTCTTAATATATATGGATAATATGGCAGATCATGCAATCAATCGGGTTTCTAGGTCCTGCCTTTTTTCTTACGCAACTGAGCCATGTCAAAACACCCGCCATGGCAGTATTGTGCATGGCATGCAGTCAGGTTTGAGCTAGATCAACATTTTCCTTTAGTTTGAATTCCTCAAATTTTGGCACTTTTATGCCAATACAACATGTTTGCATATGATTTCCATATATGCAGCCACCTAATTCAAACCATAATTTTTTTTTTTTTTACAGGGATCGGATGCCTTCTCACAGTCTGGTCTTTATTCCAATCATCAAGACATTGGACCACGTTATGCTGTGAGTAATTTCTTTTACATATACCATGACCAGTAAAATTTCATAGTGCGTGAAATTCTATCTGGAACAGATTCCATTATACAAGTCATCACTCAGTTATTTTGTTTATTCAACAATATCTCTGTATCAGAATGCTCACGAGTTTCAATTTCAGGGCGTATTGCTGGGACTATCGAATACAGCAGGTGTGCTTGCTGGCGTCTTTGGCACAGCTGCAACTGGATACATACTTCAAAGAGGTCCGAGAGTTCTCCACATTCATTTCGGAGTTTACACTTCTTTGCAATTTATATATCATTGGTTTCACTTATATGTGATTTTTCATTGCAGGTTCTTGGAATGACGTGTTTAAGGTTTCTGTTGCATTATACATAATAGGCACACTGGTATGGAATATATTTTCTACTGGGGAGAAGATTCTTGACTGA

Protein sequence

>MS.gene51603.t1

MHDRNVYQLRKDLSLQRGSVFSVQSGGQIASNPFAKSRSHIEQREVYGLGVRKLSKINKVCVHYSSEEYDIDETKVDPVASDEGTGEAILLEGNGSLVSPWWQQLPKRWLIVMLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKVVLGFGVVWWSMATILTPIAARIGLPCLLIMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLSLVYSGMYLGSVVGLAFSPFLIQNLGWPSVFYSFGSLGSIWFAFWLRKAYSSPKDDPDLGVEEKKLILEGGVSKTSVSDIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSKGVSLTTVRKIMQSIGFLGPAFFLTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVALYIIGTLVWNIFSTGEKILD