Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80139.t1 | XP_003614409.1 | 84.3 | 408 | 17 | 2 | 1 | 361 | 590 | 997 | 2.10E-177 | 631.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80139.t1 | Q9LI74 | 63.9 | 402 | 86 | 4 | 3 | 345 | 583 | 984 | 9.9e-128 | 458.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80139.t1 | G7JX26 | 84.3 | 408 | 17 | 2 | 1 | 361 | 590 | 997 | 1.5e-177 | 631.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene80139 | 0.839188 | 1.84E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene80139 | 0.908706 | 1.28E-81 | -1.69E-46 |
| MS.gene049173 | MS.gene80139 | 0.860502 | 1.97E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene80139 | 0.872377 | 3.33E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene80139 | 0.919474 | 4.30E-87 | -1.69E-46 |
| MS.gene049232 | MS.gene80139 | 0.919794 | 2.88E-87 | -1.69E-46 |
| MS.gene049285 | MS.gene80139 | 0.921259 | 4.50E-88 | -1.69E-46 |
| MS.gene049320 | MS.gene80139 | 0.922425 | 1.00E-88 | -1.69E-46 |
| MS.gene049369 | MS.gene80139 | 0.820176 | 7.88E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene80139 | 0.858374 | 8.61E-63 | -1.69E-46 |
| MS.gene04939 | MS.gene80139 | 0.829966 | 3.83E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene80139 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene049600 | MS.gene80139 | 0.805854 | 1.09E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene80139 | 0.906952 | 8.55E-81 | -1.69E-46 |
| MS.gene049611 | MS.gene80139 | -0.813144 | 2.97E-51 | -1.69E-46 |
| MS.gene049615 | MS.gene80139 | 0.817909 | 2.58E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene80139 | 0.815609 | 8.47E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene80139 | 0.8808 | 4.07E-70 | -1.69E-46 |
| MS.gene049656 | MS.gene80139 | 0.81395 | 1.97E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene80139 | 0.817199 | 3.73E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene80139 | 0.885141 | 1.05E-71 | -1.69E-46 |
| MS.gene049865 | MS.gene80139 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene80139 | 0.891987 | 2.40E-74 | -1.69E-46 |
| MS.gene050163 | MS.gene80139 | 0.889255 | 2.85E-73 | -1.69E-46 |
| MS.gene050165 | MS.gene80139 | 0.882554 | 9.45E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene80139 | 0.895066 | 1.36E-75 | -1.69E-46 |
| MS.gene050216 | MS.gene80139 | 0.847765 | 9.40E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene80139 | 0.91736 | 5.84E-86 | -1.69E-46 |
| MS.gene050333 | MS.gene80139 | 0.876164 | 1.74E-68 | -1.69E-46 |
| MS.gene050338 | MS.gene80139 | -0.812734 | 3.65E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene80139 | -0.837065 | 6.47E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene80139 | 0.85389 | 1.77E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene80139 | 0.887547 | 1.30E-72 | -1.69E-46 |
| MS.gene050502 | MS.gene80139 | 0.863217 | 2.91E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene80139 | 0.919547 | 3.93E-87 | -1.69E-46 |
| MS.gene050518 | MS.gene80139 | 0.893063 | 8.90E-75 | -1.69E-46 |
| MS.gene050538 | MS.gene80139 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene80139 | 0.91496 | 1.04E-84 | -1.69E-46 |
| MS.gene050593 | MS.gene80139 | 0.874659 | 5.68E-68 | -1.69E-46 |
| MS.gene050612 | MS.gene80139 | 0.905024 | 6.64E-80 | -1.69E-46 |
| MS.gene050647 | MS.gene80139 | -0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene050662 | MS.gene80139 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene80139 | 0.903515 | 3.20E-79 | -1.69E-46 |
| MS.gene050686 | MS.gene80139 | 0.822057 | 2.90E-53 | -1.69E-46 |
| MS.gene050690 | MS.gene80139 | 0.826563 | 2.53E-54 | -1.69E-46 |
| MS.gene050697 | MS.gene80139 | 0.827881 | 1.22E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene80139 | 0.90232 | 1.09E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene80139 | 0.897678 | 1.11E-76 | -1.69E-46 |
| MS.gene050772 | MS.gene80139 | 0.915443 | 5.85E-85 | -1.69E-46 |
| MS.gene05080 | MS.gene80139 | 0.875639 | 2.63E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene80139 | 0.821065 | 4.92E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene80139 | 0.90108 | 3.85E-78 | -1.69E-46 |
| MS.gene050871 | MS.gene80139 | 0.903158 | 4.63E-79 | -1.69E-46 |
| MS.gene050876 | MS.gene80139 | 0.828658 | 7.95E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene80139 | -0.827889 | 1.22E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene80139 | 0.843919 | 1.04E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene80139 | 0.890909 | 6.43E-74 | -1.69E-46 |
| MS.gene050986 | MS.gene80139 | 0.916916 | 1.00E-85 | -1.69E-46 |
| MS.gene05100 | MS.gene80139 | 0.863719 | 2.04E-64 | -1.69E-46 |
| MS.gene05104 | MS.gene80139 | -0.834841 | 2.37E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene80139 | -0.827329 | 1.66E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene80139 | -0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene80139 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene80139 | 0.848987 | 4.32E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene80139 | 0.852443 | 4.60E-61 | -1.69E-46 |
| MS.gene051364 | MS.gene80139 | -0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene80139 | -0.803944 | 2.74E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene80139 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene80139 | 0.864546 | 1.12E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene80139 | 0.898984 | 3.10E-77 | -1.69E-46 |
| MS.gene051651 | MS.gene80139 | -0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene80139 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene80139 | 0.823159 | 1.61E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene80139 | 0.842073 | 3.23E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene80139 | 0.833259 | 5.91E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene80139 | 0.850719 | 1.42E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene80139 | 0.854093 | 1.55E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene80139 | 0.83855 | 2.69E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene80139 | 0.840947 | 6.39E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene80139 | 0.819971 | 8.77E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene80139 | 0.817764 | 2.78E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene80139 | 0.806658 | 7.39E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene80139 | 0.912406 | 2.02E-83 | -1.69E-46 |
| MS.gene052271 | MS.gene80139 | 0.82721 | 1.77E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene80139 | 0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene80139 | 0.809307 | 2.02E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene80139 | 0.814897 | 1.22E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene80139 | -0.811422 | 7.06E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene80139 | 0.805829 | 1.11E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene80139 | 0.836841 | 7.39E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene80139 | 0.888796 | 4.30E-73 | -1.69E-46 |
| MS.gene052484 | MS.gene80139 | 0.805878 | 1.08E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene80139 | 0.894366 | 2.64E-75 | -1.69E-46 |
| MS.gene052501 | MS.gene80139 | 0.8673 | 1.51E-65 | -1.69E-46 |
| MS.gene052503 | MS.gene80139 | 0.929611 | 5.42E-93 | -1.69E-46 |
| MS.gene052504 | MS.gene80139 | 0.84637 | 2.27E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene80139 | 0.855065 | 8.10E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene80139 | 0.880965 | 3.55E-70 | -1.69E-46 |
| MS.gene052615 | MS.gene80139 | 0.870465 | 1.43E-66 | -1.69E-46 |
| MS.gene052820 | MS.gene80139 | 0.816006 | 6.91E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene80139 | 0.888536 | 5.41E-73 | -1.69E-46 |
| MS.gene052823 | MS.gene80139 | 0.931598 | 2.98E-94 | -1.69E-46 |
| MS.gene052825 | MS.gene80139 | 0.919534 | 3.99E-87 | -1.69E-46 |
| MS.gene052870 | MS.gene80139 | 0.807263 | 5.51E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene80139 | 0.828766 | 7.49E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene80139 | 0.856674 | 2.74E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene80139 | 0.885751 | 6.21E-72 | -1.69E-46 |
| MS.gene052982 | MS.gene80139 | 0.80686 | 6.70E-50 | -1.69E-46 |
| MS.gene052987 | MS.gene80139 | 0.801151 | 1.03E-48 | -1.69E-46 |
| MS.gene053018 | MS.gene80139 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene80139 | 0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene053117 | MS.gene80139 | 0.811715 | 6.09E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene80139 | 0.906167 | 1.98E-80 | -1.69E-46 |
| MS.gene053207 | MS.gene80139 | 0.855068 | 8.08E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene80139 | 0.920929 | 6.86E-88 | -1.69E-46 |
| MS.gene053286 | MS.gene80139 | 0.92177 | 2.33E-88 | -1.69E-46 |
| MS.gene053322 | MS.gene80139 | 0.80366 | 3.13E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene80139 | -0.837473 | 5.09E-57 | -1.69E-46 |
| MS.gene053421 | MS.gene80139 | -0.812535 | 4.04E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene80139 | 0.897236 | 1.71E-76 | -1.69E-46 |
| MS.gene053449 | MS.gene80139 | 0.832827 | 7.57E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene80139 | 0.848619 | 5.46E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene80139 | 0.868831 | 4.87E-66 | -1.69E-46 |
| MS.gene053574 | MS.gene80139 | 0.928874 | 1.56E-92 | -1.69E-46 |
| MS.gene053626 | MS.gene80139 | 0.890011 | 1.45E-73 | -1.69E-46 |
| MS.gene053632 | MS.gene80139 | 0.885369 | 8.63E-72 | -1.69E-46 |
| MS.gene053633 | MS.gene80139 | 0.840607 | 7.85E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene80139 | 0.886031 | 4.87E-72 | -1.69E-46 |
| MS.gene053912 | MS.gene80139 | 0.828569 | 8.36E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene80139 | 0.879366 | 1.32E-69 | -1.69E-46 |
| MS.gene054003 | MS.gene80139 | 0.868611 | 5.74E-66 | -1.69E-46 |
| MS.gene054408 | MS.gene80139 | 0.855093 | 7.95E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene80139 | 0.904055 | 1.83E-79 | -1.69E-46 |
| MS.gene054600 | MS.gene80139 | 0.88227 | 1.20E-70 | -1.69E-46 |
| MS.gene054642 | MS.gene80139 | 0.912534 | 1.74E-83 | -1.69E-46 |
| MS.gene054706 | MS.gene80139 | -0.856698 | 2.70E-62 | -1.69E-46 |
| MS.gene054707 | MS.gene80139 | -0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene80139 | 0.900119 | 1.01E-77 | -1.69E-46 |
| MS.gene054742 | MS.gene80139 | -0.80481 | 1.81E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene80139 | 0.855977 | 4.39E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene80139 | 0.805997 | 1.02E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene80139 | 0.927197 | 1.64E-91 | -1.69E-46 |
| MS.gene05505 | MS.gene80139 | 0.872613 | 2.78E-67 | -1.69E-46 |
| MS.gene055154 | MS.gene80139 | -0.837603 | 4.72E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene80139 | 0.854033 | 1.61E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene80139 | 0.859988 | 2.83E-63 | -1.69E-46 |
| MS.gene055224 | MS.gene80139 | 0.849417 | 3.28E-60 | -1.69E-46 |
| MS.gene055289 | MS.gene80139 | 0.849752 | 2.64E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene80139 | 0.925091 | 2.93E-90 | -1.69E-46 |
| MS.gene055502 | MS.gene80139 | 0.922976 | 4.87E-89 | -1.69E-46 |
| MS.gene055577 | MS.gene80139 | 0.90646 | 1.45E-80 | -1.69E-46 |
| MS.gene055629 | MS.gene80139 | 0.862052 | 6.66E-64 | -1.69E-46 |
| MS.gene055638 | MS.gene80139 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene80139 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene80139 | 0.885705 | 6.46E-72 | -1.69E-46 |
| MS.gene055748 | MS.gene80139 | 0.875166 | 3.82E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene80139 | 0.891339 | 4.35E-74 | -1.69E-46 |
| MS.gene055751 | MS.gene80139 | 0.880601 | 4.80E-70 | -1.69E-46 |
| MS.gene055776 | MS.gene80139 | 0.872834 | 2.35E-67 | -1.69E-46 |
| MS.gene055849 | MS.gene80139 | 0.818725 | 1.69E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene80139 | 0.912954 | 1.08E-83 | -1.69E-46 |
| MS.gene055909 | MS.gene80139 | 0.810566 | 1.08E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene80139 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene80139 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene80139 | 0.891794 | 2.87E-74 | -1.69E-46 |
| MS.gene056040 | MS.gene80139 | 0.845341 | 4.31E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene80139 | 0.875514 | 2.90E-68 | -1.69E-46 |
| MS.gene056083 | MS.gene80139 | 0.836553 | 8.75E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene80139 | 0.880596 | 4.82E-70 | -1.69E-46 |
| MS.gene056359 | MS.gene80139 | -0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene80139 | 0.88143 | 2.42E-70 | -1.69E-46 |
| MS.gene056387 | MS.gene80139 | 0.865218 | 6.93E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene80139 | 0.806284 | 8.86E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene80139 | 0.832175 | 1.10E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene80139 | 0.844782 | 6.11E-59 | -1.69E-46 |
| MS.gene056448 | MS.gene80139 | 0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene056450 | MS.gene80139 | 0.811969 | 5.37E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene80139 | 0.851772 | 7.14E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene80139 | 0.948139 | 1.70E-106 | -1.69E-46 |
| MS.gene056510 | MS.gene80139 | 0.913369 | 6.66E-84 | -1.69E-46 |
| MS.gene056511 | MS.gene80139 | 0.81931 | 1.24E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene80139 | 0.852169 | 5.51E-61 | -1.69E-46 |
| MS.gene056590 | MS.gene80139 | -0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene80139 | -0.819556 | 1.09E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene80139 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene80139 | 0.83195 | 1.25E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene80139 | 0.932747 | 5.35E-95 | -1.69E-46 |
| MS.gene05666 | MS.gene80139 | 0.835958 | 1.24E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene80139 | 0.879083 | 1.66E-69 | -1.69E-46 |
| MS.gene056694 | MS.gene80139 | -0.807369 | 5.23E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene80139 | -0.810989 | 8.76E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene80139 | 0.838202 | 3.31E-57 | -1.69E-46 |
| MS.gene056898 | MS.gene80139 | 0.832418 | 9.56E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene80139 | 0.825674 | 4.12E-54 | -1.69E-46 |
| MS.gene057014 | MS.gene80139 | -0.80255 | 5.32E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene80139 | 0.813825 | 2.10E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene80139 | 0.880202 | 6.66E-70 | -1.69E-46 |
| MS.gene057086 | MS.gene80139 | 0.892682 | 1.27E-74 | -1.69E-46 |
| MS.gene057129 | MS.gene80139 | 0.812107 | 5.01E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene80139 | -0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene80139 | 0.854416 | 1.25E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene80139 | 0.895805 | 6.76E-76 | -1.69E-46 |
| MS.gene05753 | MS.gene80139 | 0.829519 | 4.92E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene80139 | 0.876045 | 1.91E-68 | -1.69E-46 |
| MS.gene057734 | MS.gene80139 | 0.866378 | 2.98E-65 | -1.69E-46 |
| MS.gene057805 | MS.gene80139 | 0.814976 | 1.17E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene80139 | 0.877969 | 4.10E-69 | -1.69E-46 |
| MS.gene057856 | MS.gene80139 | 0.875877 | 2.18E-68 | -1.69E-46 |
| MS.gene057857 | MS.gene80139 | 0.863991 | 1.68E-64 | -1.69E-46 |
| MS.gene057872 | MS.gene80139 | 0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene80139 | 0.872601 | 2.80E-67 | -1.69E-46 |
| MS.gene057926 | MS.gene80139 | 0.854874 | 9.20E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene80139 | 0.876175 | 1.72E-68 | -1.69E-46 |
| MS.gene058068 | MS.gene80139 | -0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene80139 | -0.802129 | 6.50E-49 | -1.69E-46 |
| MS.gene058111 | MS.gene80139 | -0.809203 | 2.12E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene80139 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene80139 | 0.855646 | 5.49E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene80139 | -0.828888 | 7.00E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene80139 | -0.817031 | 4.07E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene80139 | -0.830444 | 2.93E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene80139 | -0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene80139 | -0.820341 | 7.22E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene80139 | -0.863695 | 2.07E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene80139 | 0.868657 | 5.55E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene80139 | 0.874794 | 5.11E-68 | -1.69E-46 |
| MS.gene058382 | MS.gene80139 | -0.803421 | 3.51E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene80139 | 0.92905 | 1.21E-92 | -1.69E-46 |
| MS.gene058544 | MS.gene80139 | 0.904552 | 1.09E-79 | -1.69E-46 |
| MS.gene058719 | MS.gene80139 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene80139 | 0.836957 | 6.90E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene80139 | 0.879958 | 8.14E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene80139 | 0.903728 | 2.57E-79 | -1.69E-46 |
| MS.gene05883 | MS.gene80139 | 0.842469 | 2.54E-58 | -1.69E-46 |
| MS.gene058978 | MS.gene80139 | -0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene80139 | 0.914498 | 1.79E-84 | -1.69E-46 |
| MS.gene059023 | MS.gene80139 | 0.892553 | 1.43E-74 | -1.69E-46 |
| MS.gene059029 | MS.gene80139 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene80139 | -0.808251 | 3.40E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene80139 | 0.832683 | 8.22E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene80139 | 0.900195 | 9.34E-78 | -1.69E-46 |
| MS.gene05914 | MS.gene80139 | 0.816358 | 5.76E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene80139 | 0.834106 | 3.63E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene80139 | 0.869171 | 3.78E-66 | -1.69E-46 |
| MS.gene059367 | MS.gene80139 | 0.884357 | 2.05E-71 | -1.69E-46 |
| MS.gene059368 | MS.gene80139 | 0.827686 | 1.36E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene80139 | 0.851679 | 7.59E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene80139 | 0.825199 | 5.34E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene80139 | 0.876678 | 1.15E-68 | -1.69E-46 |
| MS.gene059677 | MS.gene80139 | 0.910202 | 2.44E-82 | -1.69E-46 |
| MS.gene059680 | MS.gene80139 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene059699 | MS.gene80139 | -0.811571 | 6.55E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene80139 | -0.827938 | 1.19E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene80139 | 0.909157 | 7.77E-82 | -1.69E-46 |
| MS.gene059756 | MS.gene80139 | 0.870733 | 1.17E-66 | -1.69E-46 |
| MS.gene059801 | MS.gene80139 | 0.868176 | 7.93E-66 | -1.69E-46 |
| MS.gene059837 | MS.gene80139 | 0.831192 | 1.92E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene80139 | 0.942458 | 6.94E-102 | -1.69E-46 |
| MS.gene059902 | MS.gene80139 | 0.831391 | 1.71E-55 | -1.69E-46 |
| MS.gene059953 | MS.gene80139 | -0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene80139 | -0.825096 | 5.65E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene80139 | 0.884207 | 2.34E-71 | -1.69E-46 |
| MS.gene06027 | MS.gene80139 | 0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene060295 | MS.gene80139 | 0.821445 | 4.02E-53 | -1.69E-46 |
| MS.gene060341 | MS.gene80139 | 0.812303 | 4.54E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene80139 | 0.89125 | 4.71E-74 | -1.69E-46 |
| MS.gene060593 | MS.gene80139 | -0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene80139 | -0.84696 | 1.56E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene80139 | 0.897204 | 1.76E-76 | -1.69E-46 |
| MS.gene060728 | MS.gene80139 | 0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene80139 | 0.914664 | 1.47E-84 | -1.69E-46 |
| MS.gene060778 | MS.gene80139 | 0.912687 | 1.46E-83 | -1.69E-46 |
| MS.gene06077 | MS.gene80139 | 0.920832 | 7.76E-88 | -1.69E-46 |
| MS.gene060804 | MS.gene80139 | 0.847661 | 1.00E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene80139 | 0.810954 | 8.92E-51 | -1.69E-46 |
| MS.gene060823 | MS.gene80139 | -0.809348 | 1.98E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene80139 | 0.885539 | 7.46E-72 | -1.69E-46 |
| MS.gene060837 | MS.gene80139 | 0.822976 | 1.78E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene80139 | 0.858498 | 7.91E-63 | -1.69E-46 |
| MS.gene06097 | MS.gene80139 | 0.884809 | 1.40E-71 | -1.69E-46 |
| MS.gene060982 | MS.gene80139 | 0.922945 | 5.07E-89 | -1.69E-46 |
| MS.gene061041 | MS.gene80139 | 0.843483 | 1.36E-58 | -1.69E-46 |
| MS.gene061044 | MS.gene80139 | -0.827255 | 1.73E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene80139 | 0.84747 | 1.13E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene80139 | 0.87397 | 9.73E-68 | -1.69E-46 |
| MS.gene061200 | MS.gene80139 | 0.821391 | 4.14E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80139.t1 | MTR_5g053270 | 87.500 | 408 | 4 | 1 | 1 | 361 | 590 | 997 | 0.0 | 715 |
| MS.gene80139.t1 | MTR_1g093850 | 68.571 | 385 | 88 | 6 | 2 | 360 | 608 | 985 | 1.85e-169 | 498 |
| MS.gene80139.t1 | MTR_1g016290 | 54.799 | 323 | 115 | 2 | 48 | 341 | 426 | 746 | 1.33e-121 | 368 |
| MS.gene80139.t1 | MTR_4g087780 | 57.993 | 269 | 107 | 3 | 79 | 345 | 346 | 610 | 1.59e-104 | 320 |
| MS.gene80139.t1 | MTR_4g124070 | 46.970 | 264 | 140 | 0 | 80 | 343 | 293 | 556 | 7.92e-88 | 276 |
| MS.gene80139.t1 | MTR_4g124070 | 46.970 | 264 | 140 | 0 | 80 | 343 | 294 | 557 | 9.43e-88 | 275 |
| MS.gene80139.t1 | MTR_5g071840 | 43.750 | 272 | 146 | 4 | 71 | 340 | 151 | 417 | 9.60e-74 | 235 |
| MS.gene80139.t1 | MTR_5g071817 | 43.529 | 255 | 137 | 4 | 71 | 323 | 151 | 400 | 9.85e-67 | 216 |
| MS.gene80139.t1 | MTR_2g013000 | 24.561 | 285 | 193 | 8 | 79 | 349 | 357 | 633 | 5.27e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 442 | 843 | 5.41e-168 | 491 |
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 583 | 984 | 1.91e-166 | 491 |
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 583 | 984 | 1.91e-166 | 491 |
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 583 | 984 | 1.91e-166 | 491 |
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 583 | 984 | 1.91e-166 | 491 |
| MS.gene80139.t1 | AT3G25690 | 65.423 | 402 | 80 | 4 | 3 | 345 | 585 | 986 | 3.13e-166 | 490 |
| MS.gene80139.t1 | AT4G18570 | 56.272 | 279 | 105 | 4 | 79 | 347 | 352 | 623 | 1.39e-98 | 305 |
| MS.gene80139.t1 | AT1G48280 | 46.038 | 265 | 143 | 0 | 79 | 343 | 278 | 542 | 1.09e-86 | 272 |
| MS.gene80139.t1 | AT1G07120 | 41.667 | 324 | 165 | 6 | 34 | 340 | 67 | 383 | 5.82e-77 | 242 |
| MS.gene80139.t1 | AT4G18570 | 53.365 | 208 | 82 | 3 | 79 | 276 | 352 | 554 | 2.36e-66 | 220 |
| MS.gene80139.t1 | AT1G07120 | 38.846 | 260 | 139 | 4 | 34 | 276 | 67 | 323 | 4.56e-52 | 176 |
Find 81 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGAGTATTCTATGTTTC+TGG | 0.205149 | 5.1:-42262040 | None:intergenic |
| ATTTCACGGTACAGAGAATT+TGG | 0.209559 | 5.1:+42261123 | MS.gene80139:CDS |
| CTTGAGGGGCCTGAGGGGTT+TGG | 0.229444 | 5.1:-42261994 | None:intergenic |
| GAATCTTGTAGCCAGTTTAT+TGG | 0.264027 | 5.1:-42261150 | None:intergenic |
| AGCAGCTTCACATGGGAGTT+TGG | 0.269733 | 5.1:-42260867 | None:intergenic |
| ATAAACTGGCTACAAGATTC+TGG | 0.304894 | 5.1:+42261153 | MS.gene80139:CDS |
| AATCTTGTAGCCAGTTTATT+GGG | 0.305182 | 5.1:-42261149 | None:intergenic |
| ATATCAAGATCTGATGAAAT+TGG | 0.306706 | 5.1:+42260814 | MS.gene80139:CDS |
| GGCAAACTTTATCTTGCTAA+TGG | 0.330666 | 5.1:-42259877 | None:intergenic |
| TCTGAACTTGATGCATTATC+TGG | 0.340915 | 5.1:+42261540 | MS.gene80139:CDS |
| ACCCGTTGAAGAAACTAATA+AGG | 0.349118 | 5.1:-42260198 | None:intergenic |
| ACCTAAACTTTCTAAAATAA+AGG | 0.354901 | 5.1:+42259788 | MS.gene80139:CDS |
| TTAGGTGGCAAAGATATATT+AGG | 0.357928 | 5.1:-42259771 | None:intergenic |
| GCAGCTTCACATGGGAGTTT+GGG | 0.361191 | 5.1:-42260866 | None:intergenic |
| TCTCTAGCTGGTTCCTTCTC+AGG | 0.365817 | 5.1:-42261564 | None:intergenic |
| AGTGCATCTGCTTTACCTTC+AGG | 0.366034 | 5.1:-42260773 | None:intergenic |
| ACCTGGTTGCCTTTGTGAAC+TGG | 0.376411 | 5.1:+42260488 | MS.gene80139:CDS |
| AGGTCTATCTCTTTCGATCT+TGG | 0.378644 | 5.1:-42259751 | None:intergenic |
| CTACAAGATTCTGGAGTTGT+AGG | 0.385109 | 5.1:+42261162 | MS.gene80139:CDS |
| ATGCTAGGAACAACATGATT+GGG | 0.399059 | 5.1:+42260231 | MS.gene80139:CDS |
| CTGTCTTGAAGCACTTTGAT+TGG | 0.399397 | 5.1:+42260750 | MS.gene80139:CDS |
| TCCTTATTAGTTTCTTCAAC+GGG | 0.402713 | 5.1:+42260197 | MS.gene80139:CDS |
| GAACCACCACCTGATGGTTT+AGG | 0.405766 | 5.1:-42259939 | None:intergenic |
| TTTGAACTAGCATGAACAAT+TGG | 0.413777 | 5.1:-42259816 | None:intergenic |
| AGATGAAGAACTTTCCTTCC+TGG | 0.419668 | 5.1:+42260513 | MS.gene80139:CDS |
| GATGGTTTAGGAGGTGGCCT+TGG | 0.439613 | 5.1:-42259927 | None:intergenic |
| CACCAACTTGAGGGGCCTGA+GGG | 0.444292 | 5.1:-42262000 | None:intergenic |
| AATTTGGAATCCCAATAAAC+TGG | 0.445616 | 5.1:+42261139 | MS.gene80139:CDS |
| GATGCTAGGAACAACATGAT+TGG | 0.467089 | 5.1:+42260230 | MS.gene80139:CDS |
| TATCTTCTTCACCAACTTGA+GGG | 0.482375 | 5.1:-42262009 | None:intergenic |
| TTCCTTATTAGTTTCTTCAA+CGG | 0.482845 | 5.1:+42260196 | MS.gene80139:CDS |
| CTTCTCAGATATTGAAGACC+TGG | 0.490941 | 5.1:+42260471 | MS.gene80139:CDS |
| TCACCAACTTGAGGGGCCTG+AGG | 0.500840 | 5.1:-42262001 | None:intergenic |
| GATGAAGCGGGAAGCAAAGA+AGG | 0.510423 | 5.1:+42260166 | MS.gene80139:CDS |
| CTTCCAAGAGGCCTATCAAA+AGG | 0.513794 | 5.1:+42260083 | MS.gene80139:intron |
| AAGGTAAAGCAGATGCACTA+AGG | 0.515387 | 5.1:+42260777 | MS.gene80139:CDS |
| CTATCTTCTTCACCAACTTG+AGG | 0.515694 | 5.1:-42262010 | None:intergenic |
| AAGCACTTTGATTGGCCTGA+AGG | 0.517950 | 5.1:+42260758 | MS.gene80139:CDS |
| ACATTGAGAAAAGGCCTACT+CGG | 0.522076 | 5.1:+42259901 | MS.gene80139:CDS |
| TTCTTGAGAGCAGCTTCACA+TGG | 0.526810 | 5.1:-42260875 | None:intergenic |
| GCCAGTTCACAAAGGCAACC+AGG | 0.533328 | 5.1:-42260489 | None:intergenic |
| ATTGTTACGAACAAGAGATA+TGG | 0.533942 | 5.1:+42261098 | MS.gene80139:CDS |
| TTTATCAATCATTGATGAAG+CGG | 0.539733 | 5.1:+42260153 | MS.gene80139:CDS |
| AGGCCACCTCCTAAACCATC+AGG | 0.539960 | 5.1:+42259930 | MS.gene80139:CDS |
| AAGTTTAACATACAGCTAAG+AGG | 0.544134 | 5.1:-42260277 | None:intergenic |
| AGTTTGCCGACATTGAGAAA+AGG | 0.544849 | 5.1:+42259892 | MS.gene80139:CDS |
| ACCCCTCAGGCCCCTCAAGT+TGG | 0.549994 | 5.1:+42261998 | MS.gene80139:CDS |
| CCACCTGATGGTTTAGGAGG+TGG | 0.550943 | 5.1:-42259933 | None:intergenic |
| TTATCAATCATTGATGAAGC+GGG | 0.551161 | 5.1:+42260154 | MS.gene80139:CDS |
| GGTGGCCTTGGTACCCGAGT+AGG | 0.552272 | 5.1:-42259915 | None:intergenic |
| GAGTCGAATCCAAACCCCTC+AGG | 0.553936 | 5.1:+42261985 | MS.gene80139:CDS |
| TGCATTATCTGGACCTGAGA+AGG | 0.555945 | 5.1:+42261551 | MS.gene80139:CDS |
| CAAGAGATATGGCTATTTCA+CGG | 0.556828 | 5.1:+42261109 | MS.gene80139:CDS |
| CGGGTAACACATCTGATGCT+AGG | 0.574445 | 5.1:+42260216 | MS.gene80139:CDS |
| CAGGTCTTCAATATCTGAGA+AGG | 0.575182 | 5.1:-42260470 | None:intergenic |
| TTTCTTCTGTACAACTAGCA+AGG | 0.576094 | 5.1:+42261496 | MS.gene80139:CDS |
| ATCTTCTTCACCAACTTGAG+GGG | 0.577924 | 5.1:-42262008 | None:intergenic |
| TCAAATGATCAATCTGAGGA+TGG | 0.582360 | 5.1:+42259834 | MS.gene80139:CDS |
| CCACCACCTGATGGTTTAGG+AGG | 0.582529 | 5.1:-42259936 | None:intergenic |
| AGTTCACCGTGCTCCACAGT+TGG | 0.585608 | 5.1:+42260124 | MS.gene80139:CDS |
| ACCAACTTGAGGGGCCTGAG+GGG | 0.590298 | 5.1:-42261999 | None:intergenic |
| AGGTAAAGCAGATGCACTAA+GGG | 0.590443 | 5.1:+42260778 | MS.gene80139:CDS |
| GTCTTCAATATCTGAGAAGG+AGG | 0.596746 | 5.1:-42260467 | None:intergenic |
| AGAGAGTTCTTGATTCTGCA+AGG | 0.596913 | 5.1:+42261582 | MS.gene80139:CDS |
| AGAATCAAGAACTCTCTAGC+TGG | 0.597894 | 5.1:-42261576 | None:intergenic |
| CATTGAGAAAAGGCCTACTC+GGG | 0.598950 | 5.1:+42259902 | MS.gene80139:CDS |
| TAAAGCAGATGCACTAAGGG+AGG | 0.603377 | 5.1:+42260781 | MS.gene80139:CDS |
| TGATAAAATTCAACCAACTG+TGG | 0.609090 | 5.1:-42260137 | None:intergenic |
| CTTCGATGCAGAGAGCATGA+AGG | 0.615921 | 5.1:+42261946 | MS.gene80139:CDS |
| TTCATCTAGCCAGTTCACAA+AGG | 0.630833 | 5.1:-42260497 | None:intergenic |
| TAAAGGCATGCATACCAGGA+AGG | 0.633929 | 5.1:-42260527 | None:intergenic |
| ATTCAACCAACTGTGGAGCA+CGG | 0.636746 | 5.1:-42260130 | None:intergenic |
| AGATTCTGGAGTTGTAGGCA+AGG | 0.644734 | 5.1:+42261167 | MS.gene80139:CDS |
| TCTTGAGAGCAGCTTCACAT+GGG | 0.644916 | 5.1:-42260874 | None:intergenic |
| AATTACGAACCTGATGAACA+CGG | 0.646865 | 5.1:-42261620 | None:intergenic |
| AAAGGCCTACTCGGGTACCA+AGG | 0.646961 | 5.1:+42259910 | MS.gene80139:CDS |
| AGGCCTATCAAAAGGAGCAG+CGG | 0.652768 | 5.1:+42260091 | MS.gene80139:intron |
| TGCTAGGAACAACATGATTG+GGG | 0.664643 | 5.1:+42260232 | MS.gene80139:CDS |
| TAGTTCAAATGATCAATCTG+AGG | 0.680104 | 5.1:+42259830 | MS.gene80139:CDS |
| GAGTTTGGGATCATCGACGA+AGG | 0.715055 | 5.1:-42260852 | None:intergenic |
| AAAGCTGATGTAGAAACACA+AGG | 0.721363 | 5.1:+42260406 | MS.gene80139:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAATGATAAATACTA+TGG | - | chr5.1:42260947-42260966 | None:intergenic | 15.0% |
| !! | TATCTATACCATAATATAAA+GGG | - | chr5.1:42260668-42260687 | None:intergenic | 15.0% |
| !!! | TTCTATTATTTTTCTCATTT+TGG | + | chr5.1:42260308-42260327 | MS.gene80139:intron | 15.0% |
| !! | AAAATGATAAATACTATGGT+AGG | - | chr5.1:42260943-42260962 | None:intergenic | 20.0% |
| !! | CAAATATACAACATATATAC+TGG | - | chr5.1:42261346-42261365 | None:intergenic | 20.0% |
| !! | CATAAAAGAAATAACAAAAG+TGG | - | chr5.1:42261650-42261669 | None:intergenic | 20.0% |
| !! | CATTTATGAAACATGTATAT+AGG | + | chr5.1:42260381-42260400 | MS.gene80139:intron | 20.0% |
| !! | GTATCTATACCATAATATAA+AGG | - | chr5.1:42260669-42260688 | None:intergenic | 20.0% |
| !! | GTTCAAATGTAAATTAGTAA+TGG | - | chr5.1:42261792-42261811 | None:intergenic | 20.0% |
| !! | TCTCATTAAAATTTCAAACT+TGG | + | chr5.1:42260638-42260657 | MS.gene80139:intron | 20.0% |
| !! | TTCAATGAAATAAGAAAAAG+AGG | + | chr5.1:42261693-42261712 | MS.gene80139:intron | 20.0% |
| !! | TTGATTTCCTATGAAATATA+AGG | + | chr5.1:42260715-42260734 | MS.gene80139:intron | 20.0% |
| !! | TTTAATAACTCAAGAATTTG+TGG | - | chr5.1:42261375-42261394 | None:intergenic | 20.0% |
| !!! | AATGTAAATTAGTAATGGAA+AGG | - | chr5.1:42261787-42261806 | None:intergenic | 20.0% |
| !!! | ACCTAAACTTTCTAAAATAA+AGG | + | chr5.1:42259788-42259807 | MS.gene80139:CDS | 20.0% |
| !!! | TCCTTTATTTTAGAAAGTTT+AGG | - | chr5.1:42259792-42259811 | None:intergenic | 20.0% |
| !!! | TTTATTTTAGAAAGTTTAGG+TGG | - | chr5.1:42259789-42259808 | None:intergenic | 20.0% |
| ! | AAATCTAGATACACAAAACT+TGG | + | chr5.1:42261274-42261293 | MS.gene80139:intron | 25.0% |
| ! | ATATCAAGATCTGATGAAAT+TGG | + | chr5.1:42260814-42260833 | MS.gene80139:CDS | 25.0% |
| ! | CATGACTTAATATACTGTAT+TGG | + | chr5.1:42261038-42261057 | MS.gene80139:intron | 25.0% |
| ! | GCTTATAATTAATCACATGA+TGG | + | chr5.1:42261424-42261443 | MS.gene80139:intron | 25.0% |
| ! | TCATCAACCTTATATTTCAT+AGG | - | chr5.1:42260725-42260744 | None:intergenic | 25.0% |
| ! | TTTATCAATCATTGATGAAG+CGG | + | chr5.1:42260153-42260172 | MS.gene80139:CDS | 25.0% |
| !! | CATTTTACTTACCAAGAAAA+TGG | + | chr5.1:42260957-42260976 | MS.gene80139:intron | 25.0% |
| !! | TTCCTTATTAGTTTCTTCAA+CGG | + | chr5.1:42260196-42260215 | MS.gene80139:CDS | 25.0% |
| !!! | AATTTTAATGAGAAGAACGA+AGG | - | chr5.1:42260631-42260650 | None:intergenic | 25.0% |
| AAGTTTAACATACAGCTAAG+AGG | - | chr5.1:42260280-42260299 | None:intergenic | 30.0% | |
| AATAACTCAAGAATTTGTGG+AGG | - | chr5.1:42261372-42261391 | None:intergenic | 30.0% | |
| AATCTTGTAGCCAGTTTATT+GGG | - | chr5.1:42261152-42261171 | None:intergenic | 30.0% | |
| ATTGTTACGAACAAGAGATA+TGG | + | chr5.1:42261098-42261117 | MS.gene80139:CDS | 30.0% | |
| CAAATACAACACTCTAATAC+TGG | + | chr5.1:42261890-42261909 | MS.gene80139:intron | 30.0% | |
| GATAAATACTATGGTAGGAA+GGG | - | chr5.1:42260938-42260957 | None:intergenic | 30.0% | |
| GCATGTATTTAGGAAATAGA+AGG | + | chr5.1:42261725-42261744 | MS.gene80139:intron | 30.0% | |
| TAGTTCAAATGATCAATCTG+AGG | + | chr5.1:42259830-42259849 | MS.gene80139:CDS | 30.0% | |
| TCATAGGAAATCAAATGAGA+TGG | - | chr5.1:42260709-42260728 | None:intergenic | 30.0% | |
| TGATAAAATTCAACCAACTG+TGG | - | chr5.1:42260140-42260159 | None:intergenic | 30.0% | |
| TGATAAATACTATGGTAGGA+AGG | - | chr5.1:42260939-42260958 | None:intergenic | 30.0% | |
| TTACTTACCAAGAAAATGGA+TGG | + | chr5.1:42260961-42260980 | MS.gene80139:intron | 30.0% | |
| TTAGGTGGCAAAGATATATT+AGG | - | chr5.1:42259774-42259793 | None:intergenic | 30.0% | |
| TTAGTGTAGATTATCTGAGA+AGG | + | chr5.1:42260591-42260610 | MS.gene80139:intron | 30.0% | |
| TTATCAATCATTGATGAAGC+GGG | + | chr5.1:42260154-42260173 | MS.gene80139:CDS | 30.0% | |
| TTGGAGTTCCCTTTATATTA+TGG | + | chr5.1:42260657-42260676 | MS.gene80139:intron | 30.0% | |
| TTTGAACTAGCATGAACAAT+TGG | - | chr5.1:42259819-42259838 | None:intergenic | 30.0% | |
| ! | AATTTGGAATCCCAATAAAC+TGG | + | chr5.1:42261139-42261158 | MS.gene80139:CDS | 30.0% |
| ! | AGCTTTATCTACAACAAGAT+AGG | - | chr5.1:42261477-42261496 | None:intergenic | 30.0% |
| ! | TCCTTATTAGTTTCTTCAAC+GGG | + | chr5.1:42260197-42260216 | MS.gene80139:CDS | 30.0% |
| ! | TCTTAAGTCATGACACATTT+TGG | + | chr5.1:42260335-42260354 | MS.gene80139:intron | 30.0% |
| ! | TTCTTGTTTGTGAGAACAAT+TGG | - | chr5.1:42261823-42261842 | None:intergenic | 30.0% |
| !! | CAGTATTAGAGTGTTGTATT+TGG | - | chr5.1:42261892-42261911 | None:intergenic | 30.0% |
| !! | TGAAGGCTTTTGAAGATTTA+AGG | + | chr5.1:42261963-42261982 | MS.gene80139:CDS | 30.0% |
| !!! | TCAAGTTTTTTCCTCTCTTA+TGG | - | chr5.1:42261236-42261255 | None:intergenic | 30.0% |
| AAAGCTGATGTAGAAACACA+AGG | + | chr5.1:42260406-42260425 | MS.gene80139:CDS | 35.0% | |
| AATTACGAACCTGATGAACA+CGG | - | chr5.1:42261623-42261642 | None:intergenic | 35.0% | |
| ACCCGTTGAAGAAACTAATA+AGG | - | chr5.1:42260201-42260220 | None:intergenic | 35.0% | |
| ATAAACTGGCTACAAGATTC+TGG | + | chr5.1:42261153-42261172 | MS.gene80139:CDS | 35.0% | |
| ATGCTAGGAACAACATGATT+GGG | + | chr5.1:42260231-42260250 | MS.gene80139:CDS | 35.0% | |
| ATTTCACGGTACAGAGAATT+TGG | + | chr5.1:42261123-42261142 | MS.gene80139:CDS | 35.0% | |
| CAAACAAGCTTGAAATAGCT+TGG | - | chr5.1:42261764-42261783 | None:intergenic | 35.0% | |
| GAATCTTGTAGCCAGTTTAT+TGG | - | chr5.1:42261153-42261172 | None:intergenic | 35.0% | |
| GATAATCTACACTAAGCATG+AGG | - | chr5.1:42260586-42260605 | None:intergenic | 35.0% | |
| GGAGAGAACCATAATAAGAT+AGG | - | chr5.1:42261456-42261475 | None:intergenic | 35.0% | |
| GGCAAACTTTATCTTGCTAA+TGG | - | chr5.1:42259880-42259899 | None:intergenic | 35.0% | |
| GGTTCTCTCCTATCTTATTA+TGG | + | chr5.1:42261445-42261464 | MS.gene80139:intron | 35.0% | |
| GTTCATCAGGTTCGTAATTT+AGG | + | chr5.1:42261624-42261643 | MS.gene80139:intron | 35.0% | |
| TAAGAAAAAGAGGTTGACTG+AGG | + | chr5.1:42261703-42261722 | MS.gene80139:intron | 35.0% | |
| TATCTTCTTCACCAACTTGA+GGG | - | chr5.1:42262012-42262031 | None:intergenic | 35.0% | |
| TCAAATGATCAATCTGAGGA+TGG | + | chr5.1:42259834-42259853 | MS.gene80139:CDS | 35.0% | |
| TCTGAACTTGATGCATTATC+TGG | + | chr5.1:42261540-42261559 | MS.gene80139:CDS | 35.0% | |
| TTTCTTCTGTACAACTAGCA+AGG | + | chr5.1:42261496-42261515 | MS.gene80139:CDS | 35.0% | |
| ! | AGGTGATTTTGTTACGTCAT+TGG | + | chr5.1:42260426-42260445 | MS.gene80139:CDS | 35.0% |
| ! | ATACTGGTGCAAAACTCTTT+TGG | + | chr5.1:42261906-42261925 | MS.gene80139:intron | 35.0% |
| ! | CAAGAGATATGGCTATTTCA+CGG | + | chr5.1:42261109-42261128 | MS.gene80139:CDS | 35.0% |
| ! | TAGCATACTGGTATTTCTGT+TGG | - | chr5.1:42261210-42261229 | None:intergenic | 35.0% |
| ! | TATCAAGCCATCCATTTTCT+TGG | - | chr5.1:42260971-42260990 | None:intergenic | 35.0% |
| AAGGTAAAGCAGATGCACTA+AGG | + | chr5.1:42260777-42260796 | MS.gene80139:CDS | 40.0% | |
| ACAAACTCAAATCCTGCGAA+TGG | + | chr5.1:42259969-42259988 | MS.gene80139:intron | 40.0% | |
| ACATTGAGAAAAGGCCTACT+CGG | + | chr5.1:42259901-42259920 | MS.gene80139:CDS | 40.0% | |
| AGAATCAAGAACTCTCTAGC+TGG | - | chr5.1:42261579-42261598 | None:intergenic | 40.0% | |
| AGAGAGTTCTTGATTCTGCA+AGG | + | chr5.1:42261582-42261601 | MS.gene80139:CDS | 40.0% | |
| AGATGAAGAACTTTCCTTCC+TGG | + | chr5.1:42260513-42260532 | MS.gene80139:CDS | 40.0% | |
| AGGTAAAGCAGATGCACTAA+GGG | + | chr5.1:42260778-42260797 | MS.gene80139:CDS | 40.0% | |
| AGGTCTATCTCTTTCGATCT+TGG | - | chr5.1:42259754-42259773 | None:intergenic | 40.0% | |
| AGTTTGCCGACATTGAGAAA+AGG | + | chr5.1:42259892-42259911 | MS.gene80139:CDS | 40.0% | |
| ATCTTCTTCACCAACTTGAG+GGG | - | chr5.1:42262011-42262030 | None:intergenic | 40.0% | |
| CAGGTCTTCAATATCTGAGA+AGG | - | chr5.1:42260473-42260492 | None:intergenic | 40.0% | |
| CTATCTTCTTCACCAACTTG+AGG | - | chr5.1:42262013-42262032 | None:intergenic | 40.0% | |
| CTTCTCAGATATTGAAGACC+TGG | + | chr5.1:42260471-42260490 | MS.gene80139:CDS | 40.0% | |
| GATGCTAGGAACAACATGAT+TGG | + | chr5.1:42260230-42260249 | MS.gene80139:CDS | 40.0% | |
| GTATGCTAAGACCATAAGAG+AGG | + | chr5.1:42261222-42261241 | MS.gene80139:intron | 40.0% | |
| GTCTTCAATATCTGAGAAGG+AGG | - | chr5.1:42260470-42260489 | None:intergenic | 40.0% | |
| GTTGACTGAGGCATGTATTT+AGG | + | chr5.1:42261715-42261734 | MS.gene80139:intron | 40.0% | |
| TGATGAGAATTGACGCCTAA+AGG | - | chr5.1:42260547-42260566 | None:intergenic | 40.0% | |
| TGCTAGGAACAACATGATTG+GGG | + | chr5.1:42260232-42260251 | MS.gene80139:CDS | 40.0% | |
| TTCATCTAGCCAGTTCACAA+AGG | - | chr5.1:42260500-42260519 | None:intergenic | 40.0% | |
| ! | AGTAGGCCTTTTCTCAATGT+CGG | - | chr5.1:42259901-42259920 | None:intergenic | 40.0% |
| ! | ATCTGAGAAGGCATGAAACT+TGG | + | chr5.1:42260603-42260622 | MS.gene80139:intron | 40.0% |
| ! | CTCTTATGGTCTTAGCATAC+TGG | - | chr5.1:42261222-42261241 | None:intergenic | 40.0% |
| ! | CTGTCTTGAAGCACTTTGAT+TGG | + | chr5.1:42260750-42260769 | MS.gene80139:CDS | 40.0% |
| ! | GGTTTGAAACATTTGCAGAG+TGG | + | chr5.1:42261059-42261078 | MS.gene80139:intron | 40.0% |
| ! | TTTTGCTTTCCGTGTTCATC+AGG | + | chr5.1:42261611-42261630 | MS.gene80139:CDS | 40.0% |
| !! | CTACAAGATTCTGGAGTTGT+AGG | + | chr5.1:42261162-42261181 | MS.gene80139:CDS | 40.0% |
| !!! | CTCTTTTGGTTTCAGTTTGC+AGG | + | chr5.1:42261920-42261939 | MS.gene80139:intron | 40.0% |
| !!! | TTTTGGTTTCAGTTTGCAGG+AGG | + | chr5.1:42261923-42261942 | MS.gene80139:intron | 40.0% |
| ACTATGGTAGGAAGGGAAAG+AGG | - | chr5.1:42260931-42260950 | None:intergenic | 45.0% | |
| AGTGCATCTGCTTTACCTTC+AGG | - | chr5.1:42260776-42260795 | None:intergenic | 45.0% | |
| ATTCAACCAACTGTGGAGCA+CGG | - | chr5.1:42260133-42260152 | None:intergenic | 45.0% | |
| CATTGAGAAAAGGCCTACTC+GGG | + | chr5.1:42259902-42259921 | MS.gene80139:CDS | 45.0% | |
| CTTCCAAGAGGCCTATCAAA+AGG | + | chr5.1:42260083-42260102 | MS.gene80139:intron | 45.0% | |
| TAAAGCAGATGCACTAAGGG+AGG | + | chr5.1:42260781-42260800 | MS.gene80139:CDS | 45.0% | |
| TCTTGAGAGCAGCTTCACAT+GGG | - | chr5.1:42260877-42260896 | None:intergenic | 45.0% | |
| TGCATTATCTGGACCTGAGA+AGG | + | chr5.1:42261551-42261570 | MS.gene80139:CDS | 45.0% | |
| TTCCTGGTATGCATGCCTTT+AGG | + | chr5.1:42260529-42260548 | MS.gene80139:intron | 45.0% | |
| TTCTTGAGAGCAGCTTCACA+TGG | - | chr5.1:42260878-42260897 | None:intergenic | 45.0% | |
| TTTGATAGGCCTCTTGGAAG+AGG | - | chr5.1:42260083-42260102 | None:intergenic | 45.0% | |
| ! | TAAAGGCATGCATACCAGGA+AGG | - | chr5.1:42260530-42260549 | None:intergenic | 45.0% |
| !! | AAGCACTTTGATTGGCCTGA+AGG | + | chr5.1:42260758-42260777 | MS.gene80139:CDS | 45.0% |
| !! | AGATTCTGGAGTTGTAGGCA+AGG | + | chr5.1:42261167-42261186 | MS.gene80139:CDS | 45.0% |
| ACCTGGTTGCCTTTGTGAAC+TGG | + | chr5.1:42260488-42260507 | MS.gene80139:CDS | 50.0% | |
| AGCAGCTTCACATGGGAGTT+TGG | - | chr5.1:42260870-42260889 | None:intergenic | 50.0% | |
| AGGCCTATCAAAAGGAGCAG+CGG | + | chr5.1:42260091-42260110 | MS.gene80139:intron | 50.0% | |
| CGGGTAACACATCTGATGCT+AGG | + | chr5.1:42260216-42260235 | MS.gene80139:CDS | 50.0% | |
| CTAACAGAACCACCACCTGA+TGG | - | chr5.1:42259948-42259967 | None:intergenic | 50.0% | |
| GAACCACCACCTGATGGTTT+AGG | - | chr5.1:42259942-42259961 | None:intergenic | 50.0% | |
| GATGAAGCGGGAAGCAAAGA+AGG | + | chr5.1:42260166-42260185 | MS.gene80139:CDS | 50.0% | |
| GCAGATGGTATTCCATTCGC+AGG | - | chr5.1:42259984-42260003 | None:intergenic | 50.0% | |
| GCAGCTTCACATGGGAGTTT+GGG | - | chr5.1:42260869-42260888 | None:intergenic | 50.0% | |
| ! | CATCCGCTGCTCCTTTTGAT+AGG | - | chr5.1:42260097-42260116 | None:intergenic | 50.0% |
| ! | CTTCGATGCAGAGAGCATGA+AGG | + | chr5.1:42261946-42261965 | MS.gene80139:CDS | 50.0% |
| ! | GAGTTTGGGATCATCGACGA+AGG | - | chr5.1:42260855-42260874 | None:intergenic | 50.0% |
| ! | GCTCCTTTTGATAGGCCTCT+TGG | - | chr5.1:42260089-42260108 | None:intergenic | 50.0% |
| ! | TCTCTAGCTGGTTCCTTCTC+AGG | - | chr5.1:42261567-42261586 | None:intergenic | 50.0% |
| AAAGGCCTACTCGGGTACCA+AGG | + | chr5.1:42259910-42259929 | MS.gene80139:CDS | 55.0% | |
| AGGCCACCTCCTAAACCATC+AGG | + | chr5.1:42259930-42259949 | MS.gene80139:CDS | 55.0% | |
| AGTTCACCGTGCTCCACAGT+TGG | + | chr5.1:42260124-42260143 | MS.gene80139:CDS | 55.0% | |
| CCACCACCTGATGGTTTAGG+AGG | - | chr5.1:42259939-42259958 | None:intergenic | 55.0% | |
| CCACCTCCTAAACCATCAGG+TGG | + | chr5.1:42259933-42259952 | MS.gene80139:intron | 55.0% | |
| CCACCTGATGGTTTAGGAGG+TGG | - | chr5.1:42259936-42259955 | None:intergenic | 55.0% | |
| CCTCCTAAACCATCAGGTGG+TGG | + | chr5.1:42259936-42259955 | MS.gene80139:intron | 55.0% | |
| GAGTCGAATCCAAACCCCTC+AGG | + | chr5.1:42261985-42262004 | MS.gene80139:CDS | 55.0% | |
| GATAGGCCTCTTGGAAGAGG+CGG | - | chr5.1:42260080-42260099 | None:intergenic | 55.0% | |
| GATGGTTTAGGAGGTGGCCT+TGG | - | chr5.1:42259930-42259949 | None:intergenic | 55.0% | |
| GCCAGTTCACAAAGGCAACC+AGG | - | chr5.1:42260492-42260511 | None:intergenic | 55.0% | |
| GGAGGAATGGATGGAGCAGA+TGG | - | chr5.1:42259999-42260018 | None:intergenic | 55.0% | |
| ! | CGCCTAAAGGCATGCATACC+AGG | - | chr5.1:42260534-42260553 | None:intergenic | 55.0% |
| ACCAACTTGAGGGGCCTGAG+GGG | - | chr5.1:42262002-42262021 | None:intergenic | 60.0% | |
| ACGAGGAGGAGGAGGAGGAA+TGG | - | chr5.1:42260012-42260031 | None:intergenic | 60.0% | |
| CACCAACTTGAGGGGCCTGA+GGG | - | chr5.1:42262003-42262022 | None:intergenic | 60.0% | |
| GGAGGAGGAGGAGGAATGGA+TGG | - | chr5.1:42260008-42260027 | None:intergenic | 60.0% | |
| TCACCAACTTGAGGGGCCTG+AGG | - | chr5.1:42262004-42262023 | None:intergenic | 60.0% | |
| ACCCCTCAGGCCCCTCAAGT+TGG | + | chr5.1:42261998-42262017 | MS.gene80139:CDS | 65.0% | |
| AGGCCTCTTGGAAGAGGCGG+TGG | - | chr5.1:42260077-42260096 | None:intergenic | 65.0% | |
| CCTCCACCGCCTCTTCCAAG+AGG | + | chr5.1:42260071-42260090 | MS.gene80139:intron | 65.0% | |
| CCTCTTGGAAGAGGCGGTGG+AGG | - | chr5.1:42260074-42260093 | None:intergenic | 65.0% | |
| CTTGAGGGGCCTGAGGGGTT+TGG | - | chr5.1:42261997-42262016 | None:intergenic | 65.0% | |
| CTTGGAAGAGGCGGTGGAGG+AGG | - | chr5.1:42260071-42260090 | None:intergenic | 65.0% | |
| ! | GGTGGCCTTGGTACCCGAGT+AGG | - | chr5.1:42259918-42259937 | None:intergenic | 65.0% |
| CCTCCTCCTCCTCGTCCACC+AGG | + | chr5.1:42260017-42260036 | MS.gene80139:intron | 70.0% | |
| CCTCCTCCTCGTCCACCAGG+TGG | + | chr5.1:42260020-42260039 | MS.gene80139:intron | 70.0% | |
| GGAAGAGGCGGTGGAGGAGG+CGG | - | chr5.1:42260068-42260087 | None:intergenic | 70.0% | |
| GGACCTCCTCCTCCACCAGG+TGG | + | chr5.1:42260041-42260060 | MS.gene80139:intron | 70.0% | |
| GGAGGAGGAGGTCCACCTGG+TGG | - | chr5.1:42260035-42260054 | None:intergenic | 70.0% | |
| GGTCCACCTGGTGGAGGAGG+AGG | - | chr5.1:42260047-42260066 | None:intergenic | 70.0% | |
| GGTGGACCTCCTCCTCCACC+AGG | + | chr5.1:42260038-42260057 | MS.gene80139:intron | 70.0% | |
| GGTGGACGAGGAGGAGGAGG+AGG | - | chr5.1:42260017-42260036 | None:intergenic | 70.0% | |
| GGTGGAGGAGGAGGTCCACC+TGG | - | chr5.1:42260038-42260057 | None:intergenic | 70.0% | |
| ! | CCACCTGGTGGACGAGGAGG+AGG | - | chr5.1:42260023-42260042 | None:intergenic | 70.0% |
| ! | CCTGGTGGACGAGGAGGAGG+AGG | - | chr5.1:42260020-42260039 | None:intergenic | 70.0% |
| ! | GGAGGTCCACCTGGTGGACG+AGG | - | chr5.1:42260029-42260048 | None:intergenic | 70.0% |
| ! | GGTCCACCTGGTGGACGAGG+AGG | - | chr5.1:42260026-42260045 | None:intergenic | 70.0% |
| GGAGGAGGCGGTCCACCTGG+TGG | - | chr5.1:42260056-42260075 | None:intergenic | 75.0% | |
| GGAGGCGGTCCACCTGGTGG+AGG | - | chr5.1:42260053-42260072 | None:intergenic | 75.0% | |
| GGCGGTCCACCTGGTGGAGG+AGG | - | chr5.1:42260050-42260069 | None:intergenic | 75.0% | |
| GGTGGAGGAGGCGGTCCACC+TGG | - | chr5.1:42260059-42260078 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 42259747 | 42262051 | 42259747 | ID=MS.gene80139 |
| chr5.1 | mRNA | 42259747 | 42262051 | 42259747 | ID=MS.gene80139.t1;Parent=MS.gene80139 |
| chr5.1 | exon | 42259747 | 42259951 | 42259747 | ID=MS.gene80139.t1.exon1;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42259747 | 42259951 | 42259747 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42260093 | 42260286 | 42260093 | ID=MS.gene80139.t1.exon2;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42260093 | 42260286 | 42260093 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42260403 | 42260534 | 42260403 | ID=MS.gene80139.t1.exon3;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42260403 | 42260534 | 42260403 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42260737 | 42260918 | 42260737 | ID=MS.gene80139.t1.exon4;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42260737 | 42260918 | 42260737 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42261077 | 42261188 | 42261077 | ID=MS.gene80139.t1.exon5;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42261077 | 42261188 | 42261077 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42261489 | 42261632 | 42261489 | ID=MS.gene80139.t1.exon6;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42261489 | 42261632 | 42261489 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| chr5.1 | exon | 42261935 | 42262051 | 42261935 | ID=MS.gene80139.t1.exon7;Parent=MS.gene80139.t1 |
| chr5.1 | CDS | 42261935 | 42262051 | 42261935 | ID=cds.MS.gene80139.t1;Parent=MS.gene80139.t1 |
| Gene Sequence |
| Protein sequence |
