Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22902.t1 | RHN49364.1 | 95.2 | 147 | 7 | 0 | 1 | 147 | 84 | 230 | 2.10E-75 | 291.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22902.t1 | Q8GT20 | 64.8 | 145 | 51 | 0 | 3 | 147 | 6 | 150 | 7.4e-53 | 208.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22902.t1 | G7L0T0 | 95.2 | 147 | 7 | 0 | 1 | 147 | 1 | 147 | 1.5e-75 | 291.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene22902 | 0.829703 | 4.44E-55 | -1.69E-46 |
MS.gene049217 | MS.gene22902 | 0.801383 | 9.24E-49 | -1.69E-46 |
MS.gene049222 | MS.gene22902 | 0.824846 | 6.47E-54 | -1.69E-46 |
MS.gene049232 | MS.gene22902 | 0.823702 | 1.20E-53 | -1.69E-46 |
MS.gene049285 | MS.gene22902 | 0.816486 | 5.40E-52 | -1.69E-46 |
MS.gene049320 | MS.gene22902 | 0.801385 | 9.23E-49 | -1.69E-46 |
MS.gene049369 | MS.gene22902 | 0.818695 | 1.71E-52 | -1.69E-46 |
MS.gene049396 | MS.gene22902 | 0.829429 | 5.17E-55 | -1.69E-46 |
MS.gene049609 | MS.gene22902 | 0.86375 | 1.99E-64 | -1.69E-46 |
MS.gene049633 | MS.gene22902 | 0.836988 | 6.77E-57 | -1.69E-46 |
MS.gene049656 | MS.gene22902 | 0.803277 | 3.76E-49 | -1.69E-46 |
MS.gene049805 | MS.gene22902 | 0.802661 | 5.05E-49 | -1.69E-46 |
MS.gene05010 | MS.gene22902 | 0.830435 | 2.94E-55 | -1.69E-46 |
MS.gene050170 | MS.gene22902 | 0.860204 | 2.43E-63 | -1.69E-46 |
MS.gene050323 | MS.gene22902 | 0.849065 | 4.11E-60 | -1.69E-46 |
MS.gene050400 | MS.gene22902 | 0.811828 | 5.76E-51 | -1.69E-46 |
MS.gene050496 | MS.gene22902 | 0.890653 | 8.11E-74 | -1.69E-46 |
MS.gene050502 | MS.gene22902 | 0.863262 | 2.82E-64 | -1.69E-46 |
MS.gene050504 | MS.gene22902 | 0.811136 | 8.14E-51 | -1.69E-46 |
MS.gene050520 | MS.gene22902 | 0.823623 | 1.25E-53 | -1.69E-46 |
MS.gene050593 | MS.gene22902 | 0.873675 | 1.22E-67 | -1.69E-46 |
MS.gene050612 | MS.gene22902 | 0.811233 | 7.76E-51 | -1.69E-46 |
MS.gene050662 | MS.gene22902 | 0.816555 | 5.21E-52 | -1.69E-46 |
MS.gene050675 | MS.gene22902 | 0.853562 | 2.20E-61 | -1.69E-46 |
MS.gene050686 | MS.gene22902 | 0.804088 | 2.55E-49 | -1.69E-46 |
MS.gene050697 | MS.gene22902 | 0.824177 | 9.29E-54 | -1.69E-46 |
MS.gene050699 | MS.gene22902 | 0.829388 | 5.29E-55 | -1.69E-46 |
MS.gene050747 | MS.gene22902 | 0.838829 | 2.28E-57 | -1.69E-46 |
MS.gene050772 | MS.gene22902 | 0.862514 | 4.80E-64 | -1.69E-46 |
MS.gene05080 | MS.gene22902 | 0.820277 | 7.47E-53 | -1.69E-46 |
MS.gene05081 | MS.gene22902 | 0.82216 | 2.75E-53 | -1.69E-46 |
MS.gene050868 | MS.gene22902 | 0.854018 | 1.63E-61 | -1.69E-46 |
MS.gene050871 | MS.gene22902 | 0.854637 | 1.08E-61 | -1.69E-46 |
MS.gene050904 | MS.gene22902 | 0.805302 | 1.43E-49 | -1.69E-46 |
MS.gene050950 | MS.gene22902 | 0.833597 | 4.87E-56 | -1.69E-46 |
MS.gene050986 | MS.gene22902 | 0.822352 | 2.48E-53 | -1.69E-46 |
MS.gene05105 | MS.gene22902 | 0.805531 | 1.28E-49 | -1.69E-46 |
MS.gene051255 | MS.gene22902 | 0.805356 | 1.39E-49 | -1.69E-46 |
MS.gene051268 | MS.gene22902 | 0.825733 | 3.99E-54 | -1.69E-46 |
MS.gene051387 | MS.gene22902 | 0.822466 | 2.33E-53 | -1.69E-46 |
MS.gene051455 | MS.gene22902 | 0.812134 | 4.94E-51 | -1.69E-46 |
MS.gene051509 | MS.gene22902 | 0.817592 | 3.04E-52 | -1.69E-46 |
MS.gene051525 | MS.gene22902 | 0.801223 | 9.96E-49 | -1.69E-46 |
MS.gene051838 | MS.gene22902 | 0.858856 | 6.18E-63 | -1.69E-46 |
MS.gene051858 | MS.gene22902 | 0.822238 | 2.64E-53 | -1.69E-46 |
MS.gene051874 | MS.gene22902 | 0.835283 | 1.84E-56 | -1.69E-46 |
MS.gene051941 | MS.gene22902 | 0.876072 | 1.87E-68 | -1.69E-46 |
MS.gene052164 | MS.gene22902 | 0.813804 | 2.13E-51 | -1.69E-46 |
MS.gene052318 | MS.gene22902 | 0.835559 | 1.56E-56 | -1.69E-46 |
MS.gene052346 | MS.gene22902 | 0.875196 | 3.73E-68 | -1.69E-46 |
MS.gene052414 | MS.gene22902 | 0.813803 | 2.13E-51 | -1.69E-46 |
MS.gene052501 | MS.gene22902 | 0.808658 | 2.78E-50 | -1.69E-46 |
MS.gene052503 | MS.gene22902 | 0.846329 | 2.33E-59 | -1.69E-46 |
MS.gene052504 | MS.gene22902 | 0.825259 | 5.17E-54 | -1.69E-46 |
MS.gene052506 | MS.gene22902 | 0.838372 | 2.99E-57 | -1.69E-46 |
MS.gene052615 | MS.gene22902 | 0.824646 | 7.21E-54 | -1.69E-46 |
MS.gene052820 | MS.gene22902 | 0.809232 | 2.09E-50 | -1.69E-46 |
MS.gene052822 | MS.gene22902 | 0.844186 | 8.84E-59 | -1.69E-46 |
MS.gene052823 | MS.gene22902 | 0.837545 | 4.88E-57 | -1.69E-46 |
MS.gene052825 | MS.gene22902 | 0.833083 | 6.54E-56 | -1.69E-46 |
MS.gene052870 | MS.gene22902 | 0.80168 | 8.03E-49 | -1.69E-46 |
MS.gene052872 | MS.gene22902 | 0.808709 | 2.71E-50 | -1.69E-46 |
MS.gene052966 | MS.gene22902 | 0.879954 | 8.17E-70 | -1.69E-46 |
MS.gene052999 | MS.gene22902 | 0.842076 | 3.22E-58 | -1.69E-46 |
MS.gene053169 | MS.gene22902 | 0.823654 | 1.23E-53 | -1.69E-46 |
MS.gene053203 | MS.gene22902 | 0.862243 | 5.82E-64 | -1.69E-46 |
MS.gene053207 | MS.gene22902 | 0.847501 | 1.11E-59 | -1.69E-46 |
MS.gene053213 | MS.gene22902 | 0.825003 | 5.94E-54 | -1.69E-46 |
MS.gene053286 | MS.gene22902 | 0.821685 | 3.54E-53 | -1.69E-46 |
MS.gene053318 | MS.gene22902 | 0.808099 | 3.66E-50 | -1.69E-46 |
MS.gene053436 | MS.gene22902 | 0.839071 | 1.97E-57 | -1.69E-46 |
MS.gene053449 | MS.gene22902 | 0.86973 | 2.49E-66 | -1.69E-46 |
MS.gene053479 | MS.gene22902 | 0.865917 | 4.17E-65 | -1.69E-46 |
MS.gene053480 | MS.gene22902 | 0.810877 | 9.26E-51 | -1.69E-46 |
MS.gene053505 | MS.gene22902 | 0.814803 | 1.28E-51 | -1.69E-46 |
MS.gene053574 | MS.gene22902 | 0.848112 | 7.54E-60 | -1.69E-46 |
MS.gene053626 | MS.gene22902 | 0.803282 | 3.76E-49 | -1.69E-46 |
MS.gene053633 | MS.gene22902 | 0.812712 | 3.69E-51 | -1.69E-46 |
MS.gene053824 | MS.gene22902 | 0.871559 | 6.23E-67 | -1.69E-46 |
MS.gene053912 | MS.gene22902 | 0.804891 | 1.74E-49 | -1.69E-46 |
MS.gene054595 | MS.gene22902 | 0.843032 | 1.80E-58 | -1.69E-46 |
MS.gene054600 | MS.gene22902 | 0.842534 | 2.44E-58 | -1.69E-46 |
MS.gene054884 | MS.gene22902 | -0.801785 | 7.64E-49 | -1.69E-46 |
MS.gene054927 | MS.gene22902 | 0.817558 | 3.10E-52 | -1.69E-46 |
MS.gene05494 | MS.gene22902 | 0.847352 | 1.22E-59 | -1.69E-46 |
MS.gene054954 | MS.gene22902 | 0.816366 | 5.74E-52 | -1.69E-46 |
MS.gene05505 | MS.gene22902 | 0.809439 | 1.89E-50 | -1.69E-46 |
MS.gene055206 | MS.gene22902 | 0.830514 | 2.81E-55 | -1.69E-46 |
MS.gene055224 | MS.gene22902 | 0.848444 | 6.11E-60 | -1.69E-46 |
MS.gene055362 | MS.gene22902 | 0.822238 | 2.64E-53 | -1.69E-46 |
MS.gene055502 | MS.gene22902 | 0.818249 | 2.16E-52 | -1.69E-46 |
MS.gene055577 | MS.gene22902 | 0.862882 | 3.70E-64 | -1.69E-46 |
MS.gene055722 | MS.gene22902 | 0.854055 | 1.59E-61 | -1.69E-46 |
MS.gene055741 | MS.gene22902 | 0.860761 | 1.65E-63 | -1.69E-46 |
MS.gene055744 | MS.gene22902 | 0.851926 | 6.45E-61 | -1.69E-46 |
MS.gene055750 | MS.gene22902 | 0.814221 | 1.72E-51 | -1.69E-46 |
MS.gene05589 | MS.gene22902 | 0.835476 | 1.64E-56 | -1.69E-46 |
MS.gene055909 | MS.gene22902 | 0.852938 | 3.32E-61 | -1.69E-46 |
MS.gene055911 | MS.gene22902 | 0.851574 | 8.12E-61 | -1.69E-46 |
MS.gene05592 | MS.gene22902 | 0.802882 | 4.54E-49 | -1.69E-46 |
MS.gene055941 | MS.gene22902 | 0.852687 | 3.92E-61 | -1.69E-46 |
MS.gene05601 | MS.gene22902 | 0.807227 | 5.60E-50 | -1.69E-46 |
MS.gene056166 | MS.gene22902 | 0.82471 | 6.97E-54 | -1.69E-46 |
MS.gene056387 | MS.gene22902 | 0.826368 | 2.82E-54 | -1.69E-46 |
MS.gene056422 | MS.gene22902 | 0.815279 | 1.00E-51 | -1.69E-46 |
MS.gene056504 | MS.gene22902 | 0.858173 | 9.88E-63 | -1.69E-46 |
MS.gene056510 | MS.gene22902 | 0.831832 | 1.33E-55 | -1.69E-46 |
MS.gene056511 | MS.gene22902 | 0.811016 | 8.64E-51 | -1.69E-46 |
MS.gene05664 | MS.gene22902 | 0.814119 | 1.81E-51 | -1.69E-46 |
MS.gene056657 | MS.gene22902 | 0.810656 | 1.03E-50 | -1.69E-46 |
MS.gene05666 | MS.gene22902 | 0.852531 | 4.34E-61 | -1.69E-46 |
MS.gene056877 | MS.gene22902 | 0.872173 | 3.90E-67 | -1.69E-46 |
MS.gene056878 | MS.gene22902 | 0.820693 | 5.99E-53 | -1.69E-46 |
MS.gene056946 | MS.gene22902 | 0.814436 | 1.54E-51 | -1.69E-46 |
MS.gene057019 | MS.gene22902 | 0.857004 | 2.19E-62 | -1.69E-46 |
MS.gene057076 | MS.gene22902 | 0.850751 | 1.39E-60 | -1.69E-46 |
MS.gene057086 | MS.gene22902 | 0.856866 | 2.41E-62 | -1.69E-46 |
MS.gene057331 | MS.gene22902 | 0.858132 | 1.02E-62 | -1.69E-46 |
MS.gene057416 | MS.gene22902 | 0.825095 | 5.65E-54 | -1.69E-46 |
MS.gene057658 | MS.gene22902 | 0.80855 | 2.93E-50 | -1.69E-46 |
MS.gene057734 | MS.gene22902 | 0.842723 | 2.17E-58 | -1.69E-46 |
MS.gene057831 | MS.gene22902 | 0.805836 | 1.10E-49 | -1.69E-46 |
MS.gene057856 | MS.gene22902 | 0.847557 | 1.07E-59 | -1.69E-46 |
MS.gene057857 | MS.gene22902 | 0.842227 | 2.94E-58 | -1.69E-46 |
MS.gene057926 | MS.gene22902 | 0.820525 | 6.55E-53 | -1.69E-46 |
MS.gene058019 | MS.gene22902 | 0.811401 | 7.13E-51 | -1.69E-46 |
MS.gene058120 | MS.gene22902 | 0.810016 | 1.42E-50 | -1.69E-46 |
MS.gene058157 | MS.gene22902 | 0.820117 | 8.13E-53 | -1.69E-46 |
MS.gene058338 | MS.gene22902 | 0.819317 | 1.24E-52 | -1.69E-46 |
MS.gene05837 | MS.gene22902 | 0.852386 | 4.78E-61 | -1.69E-46 |
MS.gene058419 | MS.gene22902 | 0.817509 | 3.18E-52 | -1.69E-46 |
MS.gene058444 | MS.gene22902 | 0.814145 | 1.79E-51 | -1.69E-46 |
MS.gene058700 | MS.gene22902 | 0.841162 | 5.62E-58 | -1.69E-46 |
MS.gene058773 | MS.gene22902 | 0.822024 | 2.95E-53 | -1.69E-46 |
MS.gene058838 | MS.gene22902 | 0.85103 | 1.16E-60 | -1.69E-46 |
MS.gene058948 | MS.gene22902 | 0.829633 | 4.62E-55 | -1.69E-46 |
MS.gene059022 | MS.gene22902 | 0.817913 | 2.58E-52 | -1.69E-46 |
MS.gene059023 | MS.gene22902 | 0.848632 | 5.42E-60 | -1.69E-46 |
MS.gene059129 | MS.gene22902 | 0.820712 | 5.94E-53 | -1.69E-46 |
MS.gene05913 | MS.gene22902 | 0.807565 | 4.75E-50 | -1.69E-46 |
MS.gene059303 | MS.gene22902 | 0.822691 | 2.07E-53 | -1.69E-46 |
MS.gene059305 | MS.gene22902 | 0.815936 | 7.16E-52 | -1.69E-46 |
MS.gene05934 | MS.gene22902 | 0.820297 | 7.39E-53 | -1.69E-46 |
MS.gene059367 | MS.gene22902 | 0.826302 | 2.92E-54 | -1.69E-46 |
MS.gene059368 | MS.gene22902 | 0.803947 | 2.73E-49 | -1.69E-46 |
MS.gene059455 | MS.gene22902 | 0.81665 | 4.96E-52 | -1.69E-46 |
MS.gene059674 | MS.gene22902 | 0.845571 | 3.74E-59 | -1.69E-46 |
MS.gene059677 | MS.gene22902 | 0.800376 | 1.48E-48 | -1.69E-46 |
MS.gene059680 | MS.gene22902 | 0.844629 | 6.72E-59 | -1.69E-46 |
MS.gene059718 | MS.gene22902 | 0.835635 | 1.50E-56 | -1.69E-46 |
MS.gene059756 | MS.gene22902 | 0.818659 | 1.75E-52 | -1.69E-46 |
MS.gene059801 | MS.gene22902 | 0.838524 | 2.73E-57 | -1.69E-46 |
MS.gene059865 | MS.gene22902 | 0.834375 | 3.11E-56 | -1.69E-46 |
MS.gene059902 | MS.gene22902 | 0.810383 | 1.18E-50 | -1.69E-46 |
MS.gene06000 | MS.gene22902 | 0.855984 | 4.37E-62 | -1.69E-46 |
MS.gene060193 | MS.gene22902 | 0.811366 | 7.26E-51 | -1.69E-46 |
MS.gene060372 | MS.gene22902 | 0.854538 | 1.15E-61 | -1.69E-46 |
MS.gene060482 | MS.gene22902 | 0.841883 | 3.63E-58 | -1.69E-46 |
MS.gene060485 | MS.gene22902 | 0.804331 | 2.27E-49 | -1.69E-46 |
MS.gene060593 | MS.gene22902 | -0.810484 | 1.13E-50 | -1.69E-46 |
MS.gene060595 | MS.gene22902 | -0.803817 | 2.91E-49 | -1.69E-46 |
MS.gene060762 | MS.gene22902 | 0.823004 | 1.75E-53 | -1.69E-46 |
MS.gene060778 | MS.gene22902 | 0.844586 | 6.90E-59 | -1.69E-46 |
MS.gene06077 | MS.gene22902 | 0.82348 | 1.35E-53 | -1.69E-46 |
MS.gene060835 | MS.gene22902 | 0.873004 | 2.06E-67 | -1.69E-46 |
MS.gene060837 | MS.gene22902 | 0.859749 | 3.33E-63 | -1.69E-46 |
MS.gene06092 | MS.gene22902 | 0.806586 | 7.66E-50 | -1.69E-46 |
MS.gene06097 | MS.gene22902 | 0.817931 | 2.55E-52 | -1.69E-46 |
MS.gene060982 | MS.gene22902 | 0.853078 | 3.03E-61 | -1.69E-46 |
MS.gene061154 | MS.gene22902 | 0.804362 | 2.24E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22902.t1 | MTR_7g114490 | 95.238 | 147 | 7 | 0 | 1 | 147 | 1 | 147 | 1.84e-99 | 295 |
MS.gene22902.t1 | MTR_7g114560 | 89.796 | 147 | 15 | 0 | 1 | 147 | 1 | 147 | 1.17e-92 | 276 |
MS.gene22902.t1 | MTR_5g076700 | 88.435 | 147 | 17 | 0 | 1 | 147 | 1 | 147 | 1.62e-91 | 273 |
MS.gene22902.t1 | MTR_7g114550 | 85.714 | 147 | 21 | 0 | 1 | 147 | 1 | 147 | 1.84e-89 | 268 |
MS.gene22902.t1 | MTR_7g114500 | 82.000 | 150 | 27 | 0 | 1 | 150 | 1 | 150 | 2.19e-88 | 254 |
MS.gene22902.t1 | MTR_7g114470 | 84.932 | 146 | 22 | 0 | 2 | 147 | 3 | 148 | 2.61e-88 | 265 |
MS.gene22902.t1 | MTR_3g051790 | 76.871 | 147 | 34 | 0 | 1 | 147 | 4 | 150 | 1.16e-81 | 238 |
MS.gene22902.t1 | MTR_7g114520 | 78.912 | 147 | 30 | 1 | 2 | 147 | 3 | 149 | 5.18e-79 | 241 |
MS.gene22902.t1 | MTR_0042s0230 | 63.889 | 144 | 52 | 0 | 6 | 149 | 5 | 148 | 1.91e-67 | 201 |
MS.gene22902.t1 | MTR_1g040320 | 63.380 | 142 | 52 | 0 | 6 | 147 | 5 | 146 | 6.77e-63 | 199 |
MS.gene22902.t1 | MTR_1g040175 | 61.268 | 142 | 55 | 0 | 6 | 147 | 5 | 146 | 5.36e-62 | 197 |
MS.gene22902.t1 | MTR_1g040315 | 61.972 | 142 | 54 | 0 | 6 | 147 | 5 | 146 | 7.57e-60 | 191 |
MS.gene22902.t1 | MTR_1g040215 | 59.155 | 142 | 58 | 0 | 6 | 147 | 5 | 146 | 2.49e-59 | 190 |
MS.gene22902.t1 | MTR_8g039950 | 62.992 | 127 | 47 | 0 | 3 | 129 | 2 | 128 | 1.98e-58 | 178 |
MS.gene22902.t1 | MTR_1g081660 | 60.274 | 146 | 56 | 2 | 3 | 147 | 11 | 155 | 3.47e-56 | 182 |
MS.gene22902.t1 | MTR_1g040195 | 57.042 | 142 | 38 | 1 | 6 | 147 | 5 | 123 | 2.18e-49 | 164 |
MS.gene22902.t1 | MTR_7g114417 | 91.304 | 46 | 4 | 0 | 98 | 143 | 38 | 83 | 1.66e-24 | 90.5 |
MS.gene22902.t1 | MTR_7g114417 | 83.333 | 42 | 7 | 0 | 1 | 42 | 1 | 42 | 2.15e-17 | 72.4 |
MS.gene22902.t1 | MTR_7g027175 | 35.385 | 130 | 81 | 2 | 13 | 142 | 19 | 145 | 2.37e-23 | 94.7 |
MS.gene22902.t1 | MTR_8g096530 | 32.143 | 140 | 92 | 2 | 8 | 147 | 5 | 141 | 5.76e-22 | 90.9 |
MS.gene22902.t1 | MTR_3g098980 | 35.971 | 139 | 84 | 2 | 10 | 147 | 14 | 148 | 2.91e-20 | 85.9 |
MS.gene22902.t1 | MTR_3g112180 | 33.333 | 138 | 80 | 3 | 18 | 150 | 20 | 150 | 2.83e-18 | 80.5 |
MS.gene22902.t1 | MTR_7g110610 | 37.963 | 108 | 62 | 1 | 6 | 113 | 1 | 103 | 3.21e-18 | 80.1 |
MS.gene22902.t1 | MTR_4g088765 | 44.444 | 72 | 40 | 0 | 3 | 74 | 2 | 73 | 1.55e-17 | 73.6 |
MS.gene22902.t1 | MTR_4g055170 | 34.351 | 131 | 80 | 2 | 17 | 143 | 19 | 147 | 1.27e-16 | 75.9 |
MS.gene22902.t1 | MTR_4g013050 | 38.144 | 97 | 54 | 2 | 20 | 116 | 14 | 104 | 3.39e-15 | 71.6 |
MS.gene22902.t1 | MTR_0502s0010 | 65.957 | 47 | 16 | 0 | 101 | 147 | 1 | 47 | 3.79e-15 | 70.1 |
MS.gene22902.t1 | MTR_3g071320 | 37.838 | 111 | 67 | 2 | 9 | 117 | 4 | 114 | 2.78e-14 | 68.9 |
MS.gene22902.t1 | MTR_3g465930 | 31.884 | 138 | 84 | 4 | 4 | 133 | 6 | 141 | 1.22e-12 | 64.3 |
MS.gene22902.t1 | MTR_2g105330 | 32.432 | 111 | 71 | 3 | 6 | 116 | 1 | 107 | 1.74e-12 | 63.9 |
MS.gene22902.t1 | MTR_4g007540 | 39.474 | 76 | 45 | 1 | 41 | 116 | 33 | 107 | 2.74e-12 | 63.5 |
MS.gene22902.t1 | MTR_1g053315 | 29.932 | 147 | 90 | 5 | 8 | 147 | 24 | 164 | 7.07e-12 | 62.4 |
MS.gene22902.t1 | MTR_3g026950 | 34.343 | 99 | 62 | 2 | 18 | 116 | 10 | 105 | 1.18e-11 | 61.6 |
MS.gene22902.t1 | MTR_8g075610 | 32.000 | 100 | 66 | 2 | 17 | 116 | 1 | 98 | 1.44e-11 | 61.2 |
MS.gene22902.t1 | MTR_3g049150 | 31.298 | 131 | 84 | 4 | 18 | 147 | 10 | 135 | 2.09e-11 | 60.8 |
MS.gene22902.t1 | MTR_2g064495 | 31.532 | 111 | 72 | 3 | 6 | 116 | 1 | 107 | 3.17e-11 | 60.5 |
MS.gene22902.t1 | MTR_5g084870 | 33.043 | 115 | 65 | 4 | 16 | 123 | 9 | 118 | 4.22e-11 | 60.1 |
MS.gene22902.t1 | MTR_7g085990 | 32.039 | 103 | 66 | 3 | 16 | 116 | 8 | 108 | 4.54e-11 | 60.1 |
MS.gene22902.t1 | MTR_7g085930 | 32.039 | 103 | 66 | 3 | 16 | 116 | 12 | 112 | 5.05e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22902.t1 | AT5G17540 | 61.905 | 147 | 53 | 2 | 3 | 147 | 2 | 147 | 5.97e-58 | 187 |
MS.gene22902.t1 | AT3G03480 | 58.784 | 148 | 58 | 2 | 2 | 147 | 11 | 157 | 3.31e-51 | 169 |
MS.gene22902.t1 | AT3G48720 | 35.417 | 144 | 89 | 3 | 8 | 150 | 7 | 147 | 1.13e-23 | 95.5 |
MS.gene22902.t1 | AT5G41040 | 36.090 | 133 | 82 | 2 | 10 | 142 | 33 | 162 | 4.27e-22 | 91.3 |
MS.gene22902.t1 | AT5G41040 | 36.090 | 133 | 82 | 2 | 10 | 142 | 17 | 146 | 5.75e-22 | 90.9 |
MS.gene22902.t1 | AT5G63560 | 35.862 | 145 | 84 | 3 | 10 | 150 | 9 | 148 | 8.19e-22 | 90.5 |
MS.gene22902.t1 | AT1G27620 | 38.971 | 136 | 75 | 4 | 13 | 147 | 12 | 140 | 5.82e-21 | 88.2 |
MS.gene22902.t1 | AT5G57840 | 36.449 | 107 | 64 | 2 | 10 | 115 | 3 | 106 | 1.04e-15 | 73.2 |
MS.gene22902.t1 | AT2G40230 | 38.462 | 104 | 57 | 3 | 10 | 109 | 5 | 105 | 1.78e-13 | 67.0 |
MS.gene22902.t1 | AT3G62160 | 34.234 | 111 | 67 | 2 | 6 | 115 | 1 | 106 | 2.79e-13 | 66.2 |
MS.gene22902.t1 | AT5G48930 | 32.824 | 131 | 84 | 3 | 17 | 147 | 10 | 136 | 3.40e-13 | 66.2 |
MS.gene22902.t1 | AT2G19070 | 34.821 | 112 | 71 | 1 | 36 | 147 | 29 | 138 | 5.43e-13 | 65.5 |
MS.gene22902.t1 | AT5G07080 | 34.783 | 115 | 72 | 3 | 3 | 114 | 7 | 121 | 9.78e-13 | 64.7 |
MS.gene22902.t1 | AT3G47170 | 34.513 | 113 | 69 | 3 | 8 | 115 | 10 | 122 | 1.35e-12 | 64.3 |
MS.gene22902.t1 | AT1G31490 | 33.028 | 109 | 68 | 3 | 7 | 111 | 3 | 110 | 5.64e-11 | 59.7 |
Find 0 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTATAATATGTTCC+AGG | + | 51736:6947-6966 | MS.gene22902:intron | 15.0% |
! | AGTGAGTATGTCAAATTTAT+TGG | - | 51736:6926-6945 | MS.gene22902:intergenic | 25.0% |
! | ATGTAACACTTGATCAATTT+GGG | + | 51736:6751-6770 | MS.gene22902:CDS | 25.0% |
! | CATGTCTAAGAACTTTAATA+GGG | - | 51736:6611-6630 | MS.gene22902:intergenic | 25.0% |
GATGTAACACTTGATCAATT+TGG | + | 51736:6750-6769 | MS.gene22902:CDS | 30.0% | |
GCATGTCTAAGAACTTTAAT+AGG | - | 51736:6612-6631 | MS.gene22902:intergenic | 30.0% | |
TGACGATAGATAAACATCAT+AGG | - | 51736:6564-6583 | MS.gene22902:intergenic | 30.0% | |
TGTAACACTTGATCAATTTG+GGG | + | 51736:6752-6771 | MS.gene22902:CDS | 30.0% | |
! | GATAATAGTTTAACTTCACG+AGG | - | 51736:6504-6523 | MS.gene22902:intergenic | 30.0% |
!! | ATAGAAGTTCTTTGAAGCAT+GGG | - | 51736:6797-6816 | MS.gene22902:intergenic | 30.0% |
!! | TATAGAAGTTCTTTGAAGCA+TGG | - | 51736:6798-6817 | MS.gene22902:intergenic | 30.0% |
!! | TCAATAATTAGTTCTGATCC+TGG | - | 51736:6828-6847 | MS.gene22902:intergenic | 30.0% |
!!! | GGGTTTTTTTCTTTCATTGA+CGG | - | 51736:6591-6610 | MS.gene22902:intergenic | 30.0% |
ATTACTATCCATTTGCAGGA+AGG | + | 51736:6652-6671 | MS.gene22902:CDS | 35.0% | |
GAATGCGATAATTGAAACGT+AGG | - | 51736:6904-6923 | MS.gene22902:intergenic | 35.0% | |
GTGTATTACTATCCATTTGC+AGG | + | 51736:6648-6667 | MS.gene22902:CDS | 35.0% | |
TCTGACATAGATGATCAAGA+AGG | + | 51736:6522-6541 | MS.gene22902:CDS | 35.0% | |
TTTACCTGTATGAGTCGAAT+GGG | - | 51736:6855-6874 | MS.gene22902:intergenic | 35.0% | |
! | TTTTACCTGTATGAGTCGAA+TGG | - | 51736:6856-6875 | MS.gene22902:intergenic | 35.0% |
ATCCATTTGCAGGAAGGATT+AGG | + | 51736:6658-6677 | MS.gene22902:CDS | 40.0% | |
CACCATTATTGTTCACAGTG+CGG | + | 51736:6439-6458 | MS.gene22902:CDS | 40.0% | |
GAACTTCTATACGATGTTCC+AGG | + | 51736:6807-6826 | MS.gene22902:CDS | 40.0% | |
TCCATTTGCAGGAAGGATTA+GGG | + | 51736:6659-6678 | MS.gene22902:CDS | 40.0% | |
TTACCTGTATGAGTCGAATG+GGG | - | 51736:6854-6873 | MS.gene22902:intergenic | 40.0% | |
! | TAGTTTAACTTCACGAGGAG+TGG | - | 51736:6499-6518 | MS.gene22902:intergenic | 40.0% |
!! | AAGTTGATGGTGGATTGTAC+TGG | + | 51736:6696-6715 | MS.gene22902:CDS | 40.0% |
!! | AGTTCTTTGAAGCATGGGAA+TGG | - | 51736:6792-6811 | MS.gene22902:intergenic | 40.0% |
!! | GTTCTTTGAAGCATGGGAAT+GGG | - | 51736:6791-6810 | MS.gene22902:intergenic | 40.0% |
!! | TTCTTTGAAGCATGGGAATG+GGG | - | 51736:6790-6809 | MS.gene22902:intergenic | 40.0% |
ATTTGCAGGAAGGATTAGGG+AGG | + | 51736:6662-6681 | MS.gene22902:CDS | 45.0% | |
CATTATTGTTCACAGTGCGG+AGG | + | 51736:6442-6461 | MS.gene22902:CDS | 45.0% | |
CTCCGCACTGTGAACAATAA+TGG | - | 51736:6444-6463 | MS.gene22902:intergenic | 45.0% | |
TCCCTAATCCTTCCTGCAAA+TGG | - | 51736:6663-6682 | MS.gene22902:intergenic | 45.0% | |
TTTGCAGGAAGGATTAGGGA+GGG | + | 51736:6663-6682 | MS.gene22902:CDS | 45.0% | |
!! | ATGGTGGATTGTACTGGTGA+GGG | + | 51736:6702-6721 | MS.gene22902:CDS | 45.0% |
!! | TCTTTGAAGCATGGGAATGG+GGG | - | 51736:6789-6808 | MS.gene22902:intergenic | 45.0% |
!! | GATGGTGGATTGTACTGGTG+AGG | + | 51736:6701-6720 | MS.gene22902:CDS | 50.0% |
CCTGTATGAGTCGAATGGGG+CGG | - | 51736:6851-6870 | MS.gene22902:intergenic | 55.0% | |
!! | GAAGGATTAGGGAGGGTGCT+GGG | + | 51736:6670-6689 | MS.gene22902:CDS | 55.0% |
!! | TGCTGGGCGTAAGTTGATGG+TGG | + | 51736:6686-6705 | MS.gene22902:CDS | 55.0% |
CCGCCCCATTCGACTCATAC+AGG | + | 51736:6848-6867 | MS.gene22902:CDS | 60.0% | |
TCACGAGGAGTGGAAGCAGC+TGG | - | 51736:6489-6508 | MS.gene22902:intergenic | 60.0% | |
! | GGAAGGATTAGGGAGGGTGC+TGG | + | 51736:6669-6688 | MS.gene22902:CDS | 60.0% |
!! | GGGTGCTGGGCGTAAGTTGA+TGG | + | 51736:6683-6702 | MS.gene22902:CDS | 60.0% |
CGAGGAGTGGAAGCAGCTGG+TGG | - | 51736:6486-6505 | MS.gene22902:intergenic | 65.0% | |
! | CTGGTGGCACCAGCTCTGGT+TGG | - | 51736:6470-6489 | MS.gene22902:intergenic | 65.0% |
GCAGCTGGTGGCACCAGCTC+TGG | - | 51736:6474-6493 | MS.gene22902:intergenic | 70.0% | |
GCGGAGGAGCCAACCAGAGC+TGG | + | 51736:6458-6477 | MS.gene22902:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51736 | gene | 6429 | 6980 | 6429 | ID=MS.gene22902 |
51736 | mRNA | 6429 | 6980 | 6429 | ID=MS.gene22902.t1;Parent=MS.gene22902 |
51736 | exon | 6429 | 6869 | 6429 | ID=MS.gene22902.t1.exon1;Parent=MS.gene22902.t1 |
51736 | CDS | 6429 | 6869 | 6429 | ID=cds.MS.gene22902.t1;Parent=MS.gene22902.t1 |
51736 | exon | 6969 | 6980 | 6969 | ID=MS.gene22902.t1.exon2;Parent=MS.gene22902.t1 |
51736 | CDS | 6969 | 6980 | 6969 | ID=cds.MS.gene22902.t1;Parent=MS.gene22902.t1 |
Gene Sequence |
Protein sequence |